build_tree_graph {clustree} | R Documentation |
Build tree graph
Description
Build a tree graph from a set of clusterings, metadata and associated aesthetics
Usage
build_tree_graph(
clusterings,
prefix,
count_filter,
prop_filter,
metadata,
node_aes_list
)
Arguments
clusterings |
numeric matrix containing clustering information, each column contains clustering at a separate resolution |
prefix |
string indicating columns containing clustering information |
count_filter |
count threshold for filtering edges in the clustering graph |
prop_filter |
in proportion threshold for filtering edges in the clustering graph |
metadata |
data.frame containing metadata on each sample that can be used as node aesthetics |
node_aes_list |
nested list containing node aesthetics |
Value
tidygraph::tbl_graph object containing the tree graph
[Package clustree version 0.5.1 Index]