ObtainigValuePB {CoDaLoMic}R Documentation

Obtaining the principal balances values

Description

Calculates the value of the principal balances (Martín-Fernández et al, 2018) at all time points.

Usage

ObtainigValuePB(Num, Dem, especie, Tt)

Arguments

Num

List. The component i of the list has the number of the row of the matrix especie where the bacteria in the numerator of the principal balance i are placed.

Dem

List. The component i of the list has the number of the row of the matrix especie where the bacteria in the denominator of the principal balance i are placed.

especie

Matrix that contains at row i the bacterial taxa of bacteria i at all time points.

Tt

Number of time points available

Value

Returns a matrix where the row i has the value of the principal balance at all time points. The principal balance of the row i has at its numerator the bacteria placed in the rows Num[[i]] of the especie. The principal balance of the row i has at its denominator the bacteria placed in the rows Dem[[i]] of the especie.

References

Examples


set.seed(314)
esp2=t(gtools::rdirichlet(n=6, c(1,1,5,1,1)))

Num2<-list(3,c(3,5),1,c(3,5,4))
Dem2<-list(5,4,2,c(1,2))

ObtainigValuePB(Num2,Dem2,esp2,6)


[Package CoDaLoMic version 0.1.1 Index]