ExpectedValuess_BPBM {CoDaLoMic}R Documentation

Obtainig the value of the dirichlet parameters, the expected value and the variance.

Description

This function calculates the value of the dirichlet parameters, the expected value and the variance for the BPBM model.

Usage

ExpectedValuess_BPBM(Estimated.Param, MatrizPBmodelo, E, Tt)

Arguments

Estimated.Param

Vector with the estimate parameters. Column "mean" of the output of "StudyingParam" function.

MatrizPBmodelo

Matrix. Output of "ObtainingValueSPBal" called "MatrixSPBal".

E

Number of bacteria available.

Tt

Number of time points available.

Details

The regression of this model is defined by:

\mu_{it}=a_{i0}+a_{i1}\cdot\text{SPBal}_{1,t-1}+\cdots+a_{iM}\cdot\text{SPBal}_{M,t-1}

Value

Returns a list with:

References

Creus-Martí, I., Moya, A., Santonja, F. J. (2022). Bayesian hierarchical compositional models for analysing longitudinal abundance data from microbiome studies. Complexity, 2022.

Examples


Tt=3
E=3
Estimated.Param=c(0.1 ,0.4, 0.7, 0.2 ,0.5, 0.8 ,0.3, 0.6, 0.9,
                 0.1, 0.4 ,0.7, 0.2, 0.5, 0.8, 0.3 ,0.6, 0.9)
MatrizPBmodelo=rbind(c(1,1,1),c(0.3,0.6,-0.1),c(0.2,-0.4,0.3))
ExpectedValuess_BPBM(Estimated.Param,MatrizPBmodelo,E,Tt)


[Package CoDaLoMic version 0.1.1 Index]