CoDaLoMic-package {CoDaLoMic}R Documentation

CoDaLoMic

Description

This package contain functions to model compositional and longitudinal microbiome datasets. This package contains the functions needed to execute the models published in the articles:

In addition, the package contains one real dataset extracted from:

Details

We refer to the model described in Creus-Martí (2018) as Dirich-gLV, we refer to the model described in Creus-Martí (2021) as FBM and we refer to the model described in Creus-Martí (2022) as BPBM.

Access to Additional Files

This package includes files in the directory 'inst/extdata'. Users can access these files using 'system.file()'. The following files are available:

To access these files, use: base::system.file("extdata", "filename", package = "CoDaLoMic")

For instance: base::system.file("extdata", "README.pdf", package = "CoDaLoMic")

On Windows, the PDF can be opened as follows: base::shell.exec(system.file("extdata", "README.pdf", package = "CoDaLoMic"))

Author(s)

Maintainer: Irene Creus Martí ircrmar@mat.upv.es (ORCID)


[Package CoDaLoMic version 0.1.1 Index]