db_download {taxizedb} | R Documentation |
Download taxonomic databases
Description
Download taxonomic databases
Usage
db_download_ncbi(verbose = TRUE, overwrite = FALSE)
db_download_itis(verbose = TRUE, overwrite = FALSE)
db_download_tpl(verbose = TRUE, overwrite = FALSE)
db_download_wfo(verbose = TRUE, overwrite = FALSE)
db_download_col(verbose = TRUE, overwrite = FALSE)
db_download_gbif(verbose = TRUE, overwrite = FALSE)
db_download_wikidata(verbose = TRUE, overwrite = FALSE)
Arguments
verbose |
(logical) Print messages. Default: |
overwrite |
(logical) If |
Details
Downloads sql database, cleans up unneeded files, returns path to sql file
Value
(character) path to the downloaded SQL database
Note
The Plant List (TPL) is no longer accessible. If you have a copy of the sqlite database you can still use the rest of the TPL functions with it. We suggest using the World Flora Online (WFO) database as a replacement.
See Also
Examples
## Not run:
# ITIS
db_download_itis()
src_itis()
# Plantlist
db_download_tpl()
src_tpl()
# COL
db_download_col()
src_col()
# GBIF
db_download_gbif()
src_gbif()
# NCBI
db_download_ncbi()
src_ncbi()
# Wikidata
db_download_wikidata()
db_download_wikidata(overwrite=TRUE) # overwrite - download again
src_wikidata()
# World Flora Online
db_download_wfo()
src_wfo()
## End(Not run)
[Package taxizedb version 0.3.2 Index]