ISIS {mrMLM.GUI} | R Documentation |
Iterative Sure Independence Screening EM-Bayesian LASSO
ISIS(gen,phe,outATCG,genRaw,kk,psmatrix,svpal,svmlod,Genformat,CLO)
gen |
genotype matrix. |
phe |
phenotype matrix. |
outATCG |
genotype for code 1. |
genRaw |
raw genotype. |
kk |
kinship matrix. |
psmatrix |
population structure matrix. |
svpal |
Critical P-value for selecting variable. |
svmlod |
Critical LOD score for significant QTN. |
Genformat |
Format for genotypic codes. |
CLO |
number of CPU. |
Zhang Ya-Wen, Li Pei, and Zhang Yuan-Ming
Maintainer: Yuan-Ming Zhang<soyzhang@mail.hzau.edu.cn>
G1=data(mrgen) P1=data(mrphe) G2=data(mrgenraw) result=ISIS(mrgen,mrphe,outATCG=NULL,mrgenraw,kk=NULL,psmatrix=NULL, 0.01,3,1,CLO=1)