Mock Version: 2.3 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-iCellR.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1592633483.778074/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.18fgwfrp:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.18fgwfrp:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '4af8977f263a4e69be6a8c6ca2e3115f', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1592633483.778074/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.18fgwfrp:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-iCellR.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 Wrote: /builddir/build/SRPMS/R-CRAN-iCellR-1.5.1-1.fc33.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-iCellR.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1592633483.778074/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.18fgwfrp:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.18fgwfrp:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '36b6831b157646f6bd8891f6e4571b83', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1592633483.778074/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.18fgwfrp:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-CRAN-iCellR.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.EXTjvu + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf iCellR + /usr/bin/mkdir -p iCellR + cd iCellR + /usr/bin/gzip -dc /builddir/build/SOURCES/iCellR_1.5.1.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + find -type f -executable -exec grep -Iq . '{}' ';' -exec sed -i -e '$a\' '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Lmyg9w + umask 022 + cd /builddir/build/BUILD + cd iCellR + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.OXEf8t + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64 ++ dirname /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64 + cd iCellR + mkdir -p /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64/usr/local/lib/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64/usr/local/lib/R/library iCellR * installing *source* package 'iCellR' ... ** package 'iCellR' successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'iCellR' finding HTML links ... done add.adt html add.vdj html adt.rna.merge html cc html cell.cycle html cell.filter html cell.gating html cell.type.pred html change.clust html clono.plot html clust.avg.exp html clust.cond.info html clust.rm html clust.stats.plot html cluster.plot html data.aggregation html data.scale html demo.obj html down.sample html find.dim.genes html findMarkers html g2m.phase html gate.to.clust html gene.plot html gene.stats html gg.cor html heatmap.gg.plot html hto.anno html iba html iclust html load.h5 html load10x html make.gene.model html make.obj html myImp html norm.adt html norm.data html opt.pcs.plot html prep.vdj html pseudotime html pseudotime.tree html qc.stats html run.anchor html run.cca html run.clustering html run.diff.exp html run.diffusion.map html run.impute html run.knetl html run.mnn html run.pc.tsne html run.pca html run.phenograph html run.tsne html run.umap html finding level-2 HTML links ... done s.phase html stats.plot html top.markers html vdj.stats html volcano.ma.plot html ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (iCellR) + test -d iCellR/src + rm -f /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64/usr/local/lib/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 1.5.1-1.fc33 --unique-debug-suffix -1.5.1-1.fc33.x86_64 --unique-debug-src-base R-CRAN-iCellR-1.5.1-1.fc33.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/iCellR + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/local/lib/R/library/iCellR/extdata/S.txt is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/iCellR/extdata/MG1.txt is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/iCellR/extdata/M.txt is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/iCellR/extdata/G2M.txt is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/iCellR/extdata/G1S.txt is executable but has no shebang, removing executable bit *** WARNING: ./usr/local/lib/R/library/iCellR/extdata/G0.txt is executable but has no shebang, removing executable bit Processing files: R-CRAN-iCellR-1.5.1-1.fc33.noarch Provides: R-CRAN-iCellR = 1.5.1-1.fc33 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64 Wrote: /builddir/build/RPMS/R-CRAN-iCellR-1.5.1-1.fc33.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.88lirv + umask 022 + cd /builddir/build/BUILD + cd iCellR + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-CRAN-iCellR-1.5.1-1.fc33.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0