SangerData2 {FBMS}R Documentation

Gene expression data lymphoblastoid cell lines of all 210 unrelated HapMap individuals from four populations

Description

A 210 times 3221 matrix with indviduals along the rows and expression data along the columns

Usage

data(SangerData2)

Format

A data frame with 210 rows and 3221 variables

Details

The first column corresponds to column number 24266 (with name GI_6005726-S) in the original data. Column names give the name of the variables, row names the "name" of the individuals. This is a subset of SangerData where the 3220 last rows are select among all original rows following the same pre-processing procedure as in (section 1.6.1). See also the file Read_sanger_data.R

Source

Dataset downloaded from https://ftp.sanger.ac.uk/pub/genevar/

References:

Stranger, BE et al (2007): Relative impact of nucleotide and copy number variation on gene expression phenotypes Science, 2007•science.org

Bogdan et al (2020): Handbook of Multiple Comparisons, https://arxiv.org/pdf/2011.12154


[Package FBMS version 1.1 Index]