%global __brp_check_rpaths %{nil} %global packname ClussCluster %global packver 0.1.0 %global rlibdir /usr/local/lib/R/library Name: R-CRAN-%{packname} Version: 0.1.0 Release: 3%{?dist}%{?buildtag} Summary: Simultaneous Detection of Clusters and Cluster-Specific Genes inHigh-Throughput Transcriptome Data License: GPL-3 URL: https://cran.r-project.org/package=%{packname} Source0: %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz BuildRequires: R-devel >= 2.10.0 Requires: R-core >= 2.10.0 BuildArch: noarch BuildRequires: R-stats >= 3.5.0 BuildRequires: R-utils >= 3.5.0 BuildRequires: R-CRAN-ggplot2 >= 3.1.0 BuildRequires: R-CRAN-reshape2 >= 1.4.3 BuildRequires: R-CRAN-scales >= 1.0.0 BuildRequires: R-CRAN-rlang >= 0.3.4 BuildRequires: R-CRAN-VennDiagram Requires: R-stats >= 3.5.0 Requires: R-utils >= 3.5.0 Requires: R-CRAN-ggplot2 >= 3.1.0 Requires: R-CRAN-reshape2 >= 1.4.3 Requires: R-CRAN-scales >= 1.0.0 Requires: R-CRAN-rlang >= 0.3.4 Requires: R-CRAN-VennDiagram %description Implements a new method 'ClussCluster' descried in Ge Jiang and Jun Li, "Simultaneous Detection of Clusters and Cluster-Specific Genes in High-throughput Transcriptome Data" (Unpublished). Simultaneously perform clustering analysis and signature gene selection on high-dimensional transcriptome data sets. To do so, 'ClussCluster' incorporates a Lasso-type regularization penalty term to the objective function of K- means so that cell-type-specific signature genes can be identified while clustering the cells. %prep %setup -q -c -n %{packname} %build %install mkdir -p %{buildroot}%{rlibdir} %{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname} test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so) rm -f %{buildroot}%{rlibdir}/R.css %files %{rlibdir}/%{packname}