generate_subcortical_surface {threeBrain} | R Documentation |
Approximate 'sub-cortical' surfaces from 'parcellation'
Description
Superseded by volume_to_surf
. Please do not use this function.
Usage
generate_subcortical_surface(
atlas,
index,
save_prefix = NULL,
label = NULL,
IJK2RAS = NULL,
grow = 1,
remesh = TRUE,
smooth = TRUE,
smooth_delta = 3,
...
)
Arguments
atlas |
path to imaging 'parcellation', can be |
index |
'parcellation' index, see 'FreeSurfer' look-up table |
save_prefix |
parent folder to save the resulting surface |
label |
character label or name of the 'sub-cortical' structure, usually automatically derived from |
IJK2RAS |
an 'Affine' matrix from 'voxel' index to |
grow |
amount to grow (dilate) before generating mesh |
remesh , smooth , smooth_delta , ... |
passed to |
Value
A surface mesh, containing 'atlas' index, label, surface nodes and face indices.
[Package threeBrain version 1.2.0 Index]