noPattern {ProActive} | R Documentation |
No read coverage pattern
Description
Assess whether a contig/chunk does not have an elevated/gapped read coverage pattern. A horizontal line at the mean or median coverage should be the best match if the contig/chunk read coverage is not gapped or elevated.
Usage
noPattern(pileupSubset)
Arguments
pileupSubset |
A subset of the read coverage dataset that pertains only to the contig currently being assessed |
[Package ProActive version 0.1.0 Index]