smart_plot {BioVizSeq} | R Documentation |
smart_plot
Description
Visualization of domain in SMART result file
Usage
smart_plot(
fasta_file,
the_order = NULL,
domain_select = NULL,
shape = "RoundRect",
r = 0.3,
legend_size = 15,
domain_color = NULL
)
Arguments
fasta_file |
The path of protein fasta file. |
the_order |
The path of order file. A List of Gene ID , One ID Per Line. |
domain_select |
The domain ID which you want to align with. |
shape |
RoundRect or Rect. |
r |
The radius of rounded corners. |
legend_size |
The size of legend. |
domain_color |
The color set of domain. |
Value
p
Author(s)
Shiqi Zhao
[Package BioVizSeq version 0.1.1 Index]