gff_plot {BioVizSeq} | R Documentation |
gff_plot
Description
Visualization of element in gff or gtf file
Usage
gff_plot(
gff_file,
the_order = NULL,
shape = "Rect",
r = 0.3,
legend_size = 15,
element_color = NULL
)
Arguments
gff_file |
The path of gff file. |
the_order |
The path of order of mRNA. It is also the mRNA you want to showcase. A List of Gene ID , One ID Per Line. |
shape |
RoundRect or Rect. |
r |
The radius of rounded corners. |
legend_size |
The size of legend. |
element_color |
The color set of element. |
Value
p
Author(s)
Shiqi Zhao
Examples
gff_path <- system.file("extdata", "test.gff", package = "BioVizSeq")
gff_plot(gff_path)
[Package BioVizSeq version 0.1.1 Index]