plotFragHeatmap {EZFragility} | R Documentation |
Visualization functions (raw signal, fragility matrix)
Description
plotFragHeatmap
: plot fragility heatmaps with electrodes marked as soz colored
plotFragQuantile
: Plot Fragility time quantiles for two electrodes group marked as SOZ and reference
plotFragQuantile
: Plot Fragility time distribution for two electrodes group marked as SOZ and reference
Usage
plotFragHeatmap(frag, sozIndex = NULL)
plotFragQuantile(frag, sozIndex = NULL)
plotFragDistribution(frag, sozIndex = NULL)
Arguments
frag |
Fragility object from |
sozIndex |
Integer or string. A group of electrodes to mark as in the Seizure Onset Zone (SOZ) |
Value
A ggplot object
Examples
data("pt01EcoG")
## sozIndex is the index of the electrodes we assume are in the SOZ
sozIndex <- attr(pt01EcoG, "sozIndex")
## precomputed fragility object
data("pt01Frag")
## plot the fragility heatmap
plotFragHeatmap(frag = pt01Frag, sozIndex = sozIndex)
## plot the fragility quantiles
plotFragQuantile(frag = pt01Frag, sozIndex = sozIndex)
## plot the fragility distribution
plotFragDistribution(frag = pt01Frag, sozIndex = sozIndex)
[Package EZFragility version 1.0.3 Index]