prune {HetSeq} | R Documentation |
Prune trajectories
Description
Prune trajectories down to top.n candidates to reduce runtime of subsequent mincostflow function.
Usage
prune(D.list, top.n = 10)
Arguments
D.list |
List of distance matrices. Can be generated by the distmat function. |
top.n |
Prune trajectories to only top.n possible connections to optimize subsequent application of the mincostflow function. |
Value
Pruned distance matrix between cells from multiple timepoints.
Examples
# Full vignette available on https://grandr.erhard-lab.de/articles/web/hetseq.html
prune(D.list, top.n = 10)
[Package HetSeq version 0.1.0 Index]