kOT_sim_OT {ROKET}R Documentation

kOT_sim_OT

Description

kOT_sim_OT

Usage

kOT_sim_OT(work_dir, NN, nGENE, nPATH, SCEN, ncores = 1)

Arguments

work_dir

A full path to create "sim_ROKET" and subdirectories

NN

A positive integer for sample size

nGENE

A positive integer for number of genes to simulate

nPATH

A positive integer for number of pathways to simulate

SCEN

An integer taking values 1, 2, 3, or 4

ncores

A positive integer specifying the number of cores/threads to use for optimal transport calculations

Value

Nothing. Rds files are created within the simulation ROKET directory.


[Package ROKET version 1.0.0 Index]