SCimplify_for_velocity {SuperCell} | R Documentation |
Construct super-cells from spliced and un-spliced matrices
Description
Construct super-cells from spliced and un-spliced matrices
Usage
SCimplify_for_velocity(emat, nmat, gamma = NULL, membership = NULL, ...)
Arguments
emat |
spliced (exonic) count matrix |
nmat |
unspliced (nascent) count matrix |
gamma |
graining level of data (proportion of number of single cells in the initial dataset to the number of super-cells in the final dataset) |
membership |
metacell membership vector (if provided, will be used for |
... |
other parameters from SCimplify |
Value
list containing vector of membership, spliced count and un-spliced count matrices
[Package SuperCell version 1.0.1 Index]