calibration_surro {MiMIR} | R Documentation |
calibration_surro
Description
helper function that calculates the Platt Calibrations for all the surrogates
Usage
calibration_surro(
bin_phenotypes,
surrogates,
bin_names,
bin_pheno_available,
pl = FALSE,
nbins = 10
)
Arguments
bin_phenotypes |
data.frame with binary phenotypes resulting form binarize_all_pheno |
surrogates |
data.frame with surrogates resulting from calculate_surrogate_scores |
bin_names |
string with the names of the binarize clinical variables |
bin_pheno_available |
string with the names of the binarize clinical variables available in the dataset |
pl |
TRUE/FALSE. If TRUE creates the calibration plots |
nbins |
number of bins for the plots |
Value
list with the calibrated surrogates
See Also
plattCalibration
[Package MiMIR version 1.5 Index]