ref_adj {SlideCNA} | R Documentation |
Adjust for Reference (Normal) Beads
Description
Take in a data.table of genomic positions and smoothed, centered expression intensities counts and adjust for reference beads by subtracting average intensities of reference beads for each gene. This is the second reference adjustment.
Usage
ref_adj(centered_rm, normal_beads)
Arguments
centered_rm |
data.table of smoothed, centered expression intensities counts |
normal_beads |
vector of names of normal beads |
Value
rm_adj data.table of smoothed relative expression intensities
[Package SlideCNA version 0.1.0 Index]