%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  SeaGraphs
%global packver   0.1.2
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.1.2
Release:          1%{?dist}%{?buildtag}
Summary:          Sea Currents to Connectivity Transformation

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1.0
Requires:         R-core >= 4.1.0
BuildArch:        noarch
BuildRequires:    R-CRAN-sfnetworks 
BuildRequires:    R-CRAN-sf 
BuildRequires:    R-CRAN-terra 
BuildRequires:    R-CRAN-leaflet 
BuildRequires:    R-CRAN-leaflet.minicharts 
BuildRequires:    R-CRAN-leaflet.extras2 
BuildRequires:    R-methods 
BuildRequires:    R-stats 
Requires:         R-CRAN-sfnetworks 
Requires:         R-CRAN-sf 
Requires:         R-CRAN-terra 
Requires:         R-CRAN-leaflet 
Requires:         R-CRAN-leaflet.minicharts 
Requires:         R-CRAN-leaflet.extras2 
Requires:         R-methods 
Requires:         R-stats 

%description
Transformation of sea currents to connectivity data. Two files of
horizontal and vertical currents flows are transformed into connectivity
data in the form of sfnetwork, shapefile, edge list and adjacency matrix.
An application example is shown at Nagkoulis et al. (2025)
<doi:10.1016/j.dib.2024.111268>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}