dpcR-package | Digital PCR Analysis |
adpcr | Class '"adpcr"' - end-point array digital PCR experiments |
adpcr-class | Class '"adpcr"' - end-point array digital PCR experiments |
adpcr2panel | Convert adpcr object to array |
adpcr2ppp | Convert adpcr to ppp |
binarize | Binarize digital PCR data |
bind_dpcr | Bind dpcr objects |
bind_dpcr,adpcr | Bind dpcr objects |
bind_dpcr,dpcr | Bind dpcr objects |
bind_dpcr,list | Bind dpcr objects |
bind_dpcr-method | Bind dpcr objects |
bind_dpcr-methods | Bind dpcr objects |
bioamp | Analyze and plot a Bio-Rad droplet digital PCR experiment |
BioradCNV | Copy number variation experiment |
calc_coordinates | Calculate Array Coordinates |
coef-method | Class '"count_test"' |
compare_dens | Plot and Compare Densities |
count_test | Class '"count_test"' |
count_test-class | Class '"count_test"' |
create_dpcr | Create dpcR object |
ddpcRquant | Quantify droplets |
df2dpcr | Convert data.frame to dpcr object |
dpcR | Digital PCR Analysis |
dpcr | Class '"dpcr"' - general digital PCR |
dpcr-class | Class '"dpcr"' - general digital PCR |
dpcr2df | Convert dpcr object to data frame |
dpcr2df-method | Convert dpcr object to data frame |
dpcr2df-methods | Convert dpcr object to data frame |
dpcReport | Digital PCR Report Graphical User Interface |
dPCRmethyl | Methylated human gDNA |
dpcr_density | Calculate Density of Single dPCR Run |
dpcr_density_gui | Digital PCR Density Graphical User Interface |
dpcr_density_table | Calculate Density of Multiple dPCR runs |
extract_dpcr | Extract Assays or Experiments |
extract_run | Extract Digital PCR Run |
limit_cq | Limit Cy0 values |
many_peaks | Artificial data set with many peaks |
moments | Calculate Moments of Poisson Distribution |
moments-method | Calculate Moments of Poisson Distribution |
moments-methods | Calculate Moments of Poisson Distribution |
num2int | Convert numeric to integer |
pds | Plasmid dilution series results |
pds_raw | Plasmid dilution series raw data |
plot-method | Class '"count_test"' |
plot-method | Plot 'qdpcr' objects |
plot.count_test | Class '"count_test"' |
plot.qdpcr | Plot 'qdpcr' objects |
plot_panel | Plot Panel |
plot_vic_fam | Amplitude Plot VIC and FAM Channels of a Droplet Digital PCR Experiment |
qdpcr | Class '"qdpcr"' |
qdpcr-class | Class '"qdpcr"' |
qpcr2pp | qPCR to Poisson Process |
qpcr_analyser | qPCR Analyser |
qpcr_analyser-method | qPCR Analyser |
qpcr_analyser-methods | qPCR Analyser |
read_amp | Read digital PCR amplitude raw data |
read_BioMark | Read BioMark |
read_dpcr | Read digital PCR data |
read_QX100 | Read QX100 |
read_QX200 | Read QX200 |
read_redf | Read digital PCR raw data |
rename_dpcr | Rename object |
rtadpcr | Class '"rtadpcr"' - real-time array digital PCR experiments |
rtadpcr-class | Class '"rtadpcr"' - real-time array digital PCR experiments |
show | Methods for Function 'show' |
show-method | Class '"count_test"' |
show-method | Class '"qdpcr"' |
show-method | Methods for Function 'show' |
show-methods | Methods for Function 'show' |
show.qdpcr | Class '"qdpcr"' |
sim_adpcr | Simulate Array Digital PCR |
sim_dpcr | Simulate Droplet Digital PCR |
six_panels | Simulated Digital PCR data |
summary | Methods for Function 'summary' |
summary-method | Class '"count_test"' |
summary-method | Class '"qdpcr"' |
summary-method | Methods for Function 'summary' |
summary-methods | Methods for Function 'summary' |
summary.adpcr | Methods for Function 'summary' |
summary.dpcr | Methods for Function 'summary' |
summary.qdpcr | Class '"qdpcr"' |
test_counts | Test counts |
test_counts_gui | Compare digital PCR runs - interactive presentation |
test_panel | Dispersion Test for Spatial Point Pattern in Array dPCR Based on Quadrat Counts |
test_peaks | Peak Test |
test_peaks-method | Peak Test |
test_peaks-methods | Peak Test |
test_pooled | Compare pooled digital PCR |
White | Digitalized Data from a Fluidigm Array |