%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  actimetrics
%global packver   0.4.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.4.0
Release:          1%{?dist}%{?buildtag}
Summary:          Create Metrics Actigraphy and Activity Analysis

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1.0
Requires:         R-core >= 4.1.0
BuildArch:        noarch
BuildRequires:    R-CRAN-walking >= 0.8.0
BuildRequires:    R-CRAN-actibase 
BuildRequires:    R-CRAN-actiread 
BuildRequires:    R-CRAN-dplyr 
BuildRequires:    R-CRAN-lubridate 
BuildRequires:    R-CRAN-assertthat 
BuildRequires:    R-CRAN-purrr 
BuildRequires:    R-CRAN-tibble 
BuildRequires:    R-CRAN-rlang 
BuildRequires:    R-stats 
BuildRequires:    R-CRAN-tidyr 
BuildRequires:    R-methods 
Requires:         R-CRAN-walking >= 0.8.0
Requires:         R-CRAN-actibase 
Requires:         R-CRAN-actiread 
Requires:         R-CRAN-dplyr 
Requires:         R-CRAN-lubridate 
Requires:         R-CRAN-assertthat 
Requires:         R-CRAN-purrr 
Requires:         R-CRAN-tibble 
Requires:         R-CRAN-rlang 
Requires:         R-stats 
Requires:         R-CRAN-tidyr 
Requires:         R-methods 

%description
Provides functions for calibrating, counting, and summarizing actigraphy
and activity data into specific metrics and sleep measures. The metrics
include activity counts, step counts, activity index, Monitor Independent
Movement Summary Unit (MIMS), mean amplitude deviation (MAD), and provides
wrappers for sleep estimation from activity counts using Tudor-Locke
(2014) <doi:10.1139/apnm-2013-0173> and Sadeh (1994)
<doi:10.1093/sleep/17.3.201>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}