%global __brp_check_rpaths %{nil}
%global __requires_exclude ^libmpi
%global packname  saeHB.Spatial.Beta
%global packver   0.2.0
%global rlibdir   /usr/local/lib/R/library

Name:             R-CRAN-%{packname}
Version:          0.2.0
Release:          1%{?dist}%{?buildtag}
Summary:          Small Area Estimation Hierarchical Bayes for Spatial Beta Model

License:          GPL-3
URL:              https://cran.r-project.org/package=%{packname}
Source0:          %{url}&version=%{packver}#/%{packname}_%{packver}.tar.gz


BuildRequires:    R-devel >= 4.1.0
Requires:         R-core >= 4.1.0
BuildArch:        noarch
BuildRequires:    R-CRAN-runjags 
BuildRequires:    R-CRAN-coda 
BuildRequires:    R-stats 
BuildRequires:    R-grDevices 
BuildRequires:    R-graphics 
BuildRequires:    R-CRAN-sf 
BuildRequires:    R-CRAN-spdep 
Requires:         R-CRAN-runjags 
Requires:         R-CRAN-coda 
Requires:         R-stats 
Requires:         R-grDevices 
Requires:         R-graphics 
Requires:         R-CRAN-sf 
Requires:         R-CRAN-spdep 

%description
Provides several functions and datasets for area-level Small Area
Estimation using the Hierarchical Bayesian (HB) method. Model-based
estimators are designed for variables of interest that follow a Beta
distribution (proportions bounded between 0 and 1). The package supports
both non-spatial and spatial models based on Simultaneous Autoregressive
(SAR) and Leroux Conditional Autoregressive (CAR) structures for
area-level random effects, with optional survey design effect (DEFF)
adjustments for sampling variances. In addition, it provides utility
functions for constructing spatial weights matrices and performing spatial
autocorrelation diagnostics. The 'runjags' package is used to obtain
posterior estimates via Markov Chain Monte Carlo (MCMC) with parallel
computing capabilities. For references, see Rao and Molina (2015)
<doi:10.1002/9781118735855>, Liu et al. (2014)
<https://www150.statcan.gc.ca/n1/pub/12-001-x/2014001/article/14030-eng.pdf>,
Kubacki and Jedrzejczak (2016) <doi:10.59170/stattrans-2016-022>, Leroux
et al. (2000) <doi:10.1007/978-1-4612-1284-3_4>, Chung and Datta (2020)
<https://www.census.gov/content/dam/Census/library/working-papers/2020/adrm/RRS2020-07.pdf>,
Figueroa-Zúñiga et al. (2013) <doi:10.1016/j.csda.2012.12.002>, Denwood
(2016) <doi:10.18637/jss.v071.i09>, Anselin (1988)
<doi:10.1007/978-94-015-7799-1>, and Anselin and Morrison (2019)
<https://spatialanalysis.github.io/lab_tutorials/Spatial_Weights_as_Distance_Functions.html>.

%prep
%setup -q -c -n %{packname}

# fix end of executable files
find -type f -executable -exec grep -Iq . {} \; -exec sed -i -e '$a\' {} \;
# prevent binary stripping
[ -d %{packname}/src ] && find %{packname}/src -type f -exec \
  sed -i 's@/usr/bin/strip@/usr/bin/true@g' {} \; || true
[ -d %{packname}/src ] && find %{packname}/src/Make* -type f -exec \
  sed -i 's@-g0@@g' {} \; || true
# don't allow local prefix in executable scripts
find -type f -executable -exec sed -Ei 's@#!( )*/usr/local/bin@#!/usr/bin@g' {} \;

%build

%install

mkdir -p %{buildroot}%{rlibdir}
%{_bindir}/R CMD INSTALL -l %{buildroot}%{rlibdir} %{packname}
test -d %{packname}/src && (cd %{packname}/src; rm -f *.o *.so)
rm -f %{buildroot}%{rlibdir}/R.css
# remove buildroot from installed files
find %{buildroot}%{rlibdir} -type f -exec sed -i "s@%{buildroot}@@g" {} \;

%files
%{rlibdir}/%{packname}