Warning: Permanently added '3.80.241.178' (ED25519) to the list of known hosts.
Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 4732582 --chroot fedora-rawhide-aarch64 --detached
Version: 0.61
PID: 7606
Logging PID: 7607
Task:
{'appstream': True,
 'background': False,
 'bootstrap': 'off',
 'build_id': 4732582,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-aarch64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '1301338c7b4476be39b3b5b3487d99444b3406a9',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/mmseq',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'mmseq',
 'package_version': '1.0.11-5.fc38',
 'project_dirname': 'staging',
 'project_name': 'staging',
 'project_owner': 'jaruga',
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jaruga/staging/fedora-rawhide-aarch64/',
            'id': 'copr_base',
            'name': 'Copr repository'}],
 'sandbox': 'jaruga/staging--jaruga',
 'source_json': {},
 'source_type': None,
 'submitter': 'jaruga',
 'tags': [],
 'task_id': '4732582-fedora-rawhide-aarch64',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/mmseq /var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/mmseq', '/var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq'...

Running: git checkout 1301338c7b4476be39b3b5b3487d99444b3406a9

cmd: ['git', 'checkout', '1301338c7b4476be39b3b5b3487d99444b3406a9']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq
rc: 0
stdout: 
stderr: Note: switching to '1301338c7b4476be39b3b5b3487d99444b3406a9'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 1301338 automatic import of mmseq

Running: copr-distgit-client sources

cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading 1.0.11.zip
INFO: Calling: curl -H Pragma: -o 1.0.11.zip --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/jaruga/staging/mmseq/1.0.11.zip/md5/c727916d339d7a2111523800b621ce2b/1.0.11.zip
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
100 2781k  100 2781k    0     0  49.8M      0 --:--:-- --:--:-- --:--:-- 50.2M
INFO: Reading stdout from command: md5sum 1.0.11.zip

Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq/mmseq.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1660558476.360431 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 3.1 starting (python version = 3.10.4, NVR = mock-3.1-1.fc35)...
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq/mmseq.spec)  Config(fedora-rawhide-aarch64)
Start: clean chroot
Finish: clean chroot
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.1
INFO: Mock Version: 3.1
Start: dnf install
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity

This system is not registered with an entitlement server. You can use subscription-manager to register.

Copr repository                                 247 kB/s |  21 kB     00:00    
fedora                                           16 MB/s |  61 MB     00:03    
Dependencies resolved.
================================================================================
 Package                       Arch    Version                     Repo    Size
================================================================================
Installing group/module packages:
 bash                          aarch64 5.1.16-3.fc37               fedora 1.7 M
 bzip2                         aarch64 1.0.8-12.fc37               fedora  52 k
 coreutils                     aarch64 9.1-6.fc37                  fedora 1.0 M
 cpio                          aarch64 2.13-13.fc37                fedora 274 k
 diffutils                     aarch64 3.8-3.fc37                  fedora 376 k
 fedora-release-common         noarch  38-0.2                      fedora  22 k
 findutils                     aarch64 1:4.9.0-2.fc37              fedora 493 k
 gawk                          aarch64 5.1.1-4.fc37                fedora 1.0 M
 glibc-minimal-langpack        aarch64 2.36-1.fc37                 fedora  81 k
 grep                          aarch64 3.7-4.fc37                  fedora 270 k
 gzip                          aarch64 1.12-2.fc37                 fedora 164 k
 info                          aarch64 6.8-4.fc37                  fedora 220 k
 patch                         aarch64 2.7.6-17.fc37               fedora 121 k
 redhat-rpm-config             noarch  227-1.fc37                  fedora  80 k
 rpm-build                     aarch64 4.18.0-0.beta1.4.fc37       fedora  77 k
 sed                           aarch64 4.8-11.fc37                 fedora 304 k
 shadow-utils                  aarch64 2:4.11.1-4.fc37             fedora 1.1 M
 tar                           aarch64 2:1.34-3.fc36               fedora 877 k
 unzip                         aarch64 6.0-58.fc37                 fedora 182 k
 util-linux                    aarch64 2.38.1-1.fc37               fedora 2.3 M
 which                         aarch64 2.21-35.fc37                fedora  41 k
 xz                            aarch64 5.2.5-10.fc37               fedora 223 k
Installing dependencies:
 alternatives                  aarch64 1.19-3.fc37                 fedora  35 k
 ansible-srpm-macros           noarch  1-6.fc37                    fedora 7.5 k
 audit-libs                    aarch64 3.0.8-3.fc37                fedora 116 k
 authselect                    aarch64 1.4.0-3.fc37                fedora 144 k
 authselect-libs               aarch64 1.4.0-3.fc37                fedora 247 k
 basesystem                    noarch  11-14.fc37                  fedora 7.0 k
 binutils                      aarch64 2.38-24.fc38                fedora 5.8 M
 binutils-gold                 aarch64 2.38-24.fc38                fedora 924 k
 bzip2-libs                    aarch64 1.0.8-12.fc37               fedora  43 k
 ca-certificates               noarch  2022.2.54-5.fc37            fedora 829 k
 coreutils-common              aarch64 9.1-6.fc37                  fedora 2.0 M
 cracklib                      aarch64 2.9.6-28.fc36               fedora  93 k
 crypto-policies               noarch  20220802-1.gita99dfd2.fc37  fedora  86 k
 curl                          aarch64 7.84.0-2.fc37               fedora 309 k
 cyrus-sasl-lib                aarch64 2.1.28-7.fc37               fedora 777 k
 debugedit                     aarch64 5.0-5.fc37                  fedora  76 k
 dwz                           aarch64 0.14-7.fc37                 fedora 126 k
 ed                            aarch64 1.18-2.fc37                 fedora  78 k
 efi-srpm-macros               noarch  5-6.fc37                    fedora  22 k
 elfutils                      aarch64 0.187-6.fc37                fedora 522 k
 elfutils-debuginfod-client    aarch64 0.187-6.fc37                fedora  38 k
 elfutils-default-yama-scope   noarch  0.187-6.fc37                fedora  17 k
 elfutils-libelf               aarch64 0.187-6.fc37                fedora 197 k
 elfutils-libs                 aarch64 0.187-6.fc37                fedora 256 k
 fedora-gpg-keys               noarch  38-0.2                      fedora 125 k
 fedora-release                noarch  38-0.2                      fedora  12 k
 fedora-release-identity-basic noarch  38-0.2                      fedora  12 k
 fedora-repos                  noarch  38-0.2                      fedora  10 k
 fedora-repos-rawhide          noarch  38-0.2                      fedora 9.6 k
 file                          aarch64 5.42-4.fc37                 fedora  49 k
 file-libs                     aarch64 5.42-4.fc37                 fedora 674 k
 filesystem                    aarch64 3.18-2.fc37                 fedora 1.1 M
 fonts-srpm-macros             noarch  1:2.0.5-8.fc37              fedora  26 k
 fpc-srpm-macros               noarch  1.3-6.fc37                  fedora 7.7 k
 gdb-minimal                   aarch64 12.1-4.fc37                 fedora 3.5 M
 gdbm-libs                     aarch64 1:1.23-2.fc37               fedora  57 k
 ghc-srpm-macros               noarch  1.5.0-7.fc37                fedora 7.8 k
 glibc                         aarch64 2.36-1.fc37                 fedora 1.8 M
 glibc-common                  aarch64 2.36-1.fc37                 fedora 355 k
 glibc-gconv-extra             aarch64 2.36-1.fc37                 fedora 1.7 M
 gmp                           aarch64 1:6.2.1-3.fc37              fedora 265 k
 gnat-srpm-macros              noarch  4-16.fc37                   fedora 8.3 k
 go-srpm-macros                noarch  3.1.0-4.fc37                fedora  27 k
 jansson                       aarch64 2.13.1-5.fc37               fedora  46 k
 kernel-srpm-macros            noarch  1.0-15.fc37                 fedora 9.4 k
 keyutils-libs                 aarch64 1.6.1-5.fc37                fedora  31 k
 krb5-libs                     aarch64 1.19.2-11.fc37.1            fedora 733 k
 libacl                        aarch64 2.3.1-4.fc37                fedora  23 k
 libarchive                    aarch64 3.6.1-2.fc37                fedora 392 k
 libattr                       aarch64 2.5.1-5.fc37                fedora  18 k
 libblkid                      aarch64 2.38.1-1.fc37               fedora 106 k
 libbrotli                     aarch64 1.0.9-9.fc37                fedora 318 k
 libcap                        aarch64 2.48-5.fc37                 fedora  67 k
 libcap-ng                     aarch64 0.8.3-3.fc37                fedora  33 k
 libcom_err                    aarch64 1.46.5-3.fc37               fedora  25 k
 libcurl                       aarch64 7.84.0-2.fc37               fedora 301 k
 libdb                         aarch64 5.3.28-53.fc37              fedora 737 k
 libeconf                      aarch64 0.4.0-4.fc37                fedora  26 k
 libevent                      aarch64 2.1.12-7.fc37               fedora 254 k
 libfdisk                      aarch64 2.38.1-1.fc37               fedora 155 k
 libffi                        aarch64 3.4.2-9.fc37                fedora  36 k
 libgcc                        aarch64 12.1.1-4.fc38               fedora  92 k
 libgomp                       aarch64 12.1.1-4.fc38               fedora 290 k
 libidn2                       aarch64 2.3.3-2.fc37                fedora 114 k
 libmount                      aarch64 2.38.1-1.fc37               fedora 133 k
 libnghttp2                    aarch64 1.48.0-2.fc37               fedora  73 k
 libnsl2                       aarch64 2.0.0-4.fc37                fedora  30 k
 libpkgconf                    aarch64 1.8.0-3.fc37                fedora  36 k
 libpsl                        aarch64 0.21.1-6.fc37               fedora  63 k
 libpwquality                  aarch64 1.4.4-11.fc37               fedora 116 k
 libselinux                    aarch64 3.4-5.fc37                  fedora  85 k
 libsemanage                   aarch64 3.4-5.fc37                  fedora 116 k
 libsepol                      aarch64 3.4-3.fc37                  fedora 310 k
 libsigsegv                    aarch64 2.14-3.fc37                 fedora  27 k
 libsmartcols                  aarch64 2.38.1-1.fc37               fedora  63 k
 libssh                        aarch64 0.9.6-5.fc37                fedora 202 k
 libssh-config                 noarch  0.9.6-5.fc37                fedora 7.8 k
 libstdc++                     aarch64 12.1.1-4.fc38               fedora 760 k
 libtasn1                      aarch64 4.18.0-3.fc37               fedora  73 k
 libtirpc                      aarch64 1.3.3-0.fc37                fedora  94 k
 libunistring                  aarch64 1.0-2.fc37                  fedora 543 k
 libutempter                   aarch64 1.2.1-7.fc37                fedora  26 k
 libuuid                       aarch64 2.38.1-1.fc37               fedora  28 k
 libverto                      aarch64 0.3.2-4.fc37                fedora  21 k
 libxcrypt                     aarch64 4.4.28-3.fc38               fedora 121 k
 libxml2                       aarch64 2.9.14-3.fc37               fedora 734 k
 libzstd                       aarch64 1.5.2-3.fc37                fedora 267 k
 lua-libs                      aarch64 5.4.4-4.fc37                fedora 213 k
 lua-srpm-macros               noarch  1-7.fc37                    fedora 8.8 k
 lz4-libs                      aarch64 1.9.3-5.fc37                fedora  70 k
 mpfr                          aarch64 4.1.0-10.fc37               fedora 240 k
 ncurses-base                  noarch  6.3-3.20220501.fc37         fedora  86 k
 ncurses-libs                  aarch64 6.3-3.20220501.fc37         fedora 318 k
 nim-srpm-macros               noarch  3-7.fc37                    fedora 8.4 k
 ocaml-srpm-macros             noarch  7-2.fc37                    fedora  13 k
 openblas-srpm-macros          noarch  2-12.fc37                   fedora 7.5 k
 openldap                      aarch64 2.6.2-5.fc38                fedora 250 k
 openssl-libs                  aarch64 1:3.0.5-2.fc37              fedora 2.0 M
 p11-kit                       aarch64 0.24.1-3.fc37               fedora 361 k
 p11-kit-trust                 aarch64 0.24.1-3.fc37               fedora 138 k
 package-notes-srpm-macros     noarch  0.4-16.fc37                 fedora  11 k
 pam                           aarch64 1.5.2-14.fc37               fedora 567 k
 pam-libs                      aarch64 1.5.2-14.fc37               fedora  58 k
 pcre                          aarch64 8.45-1.fc37.2               fedora 184 k
 pcre2                         aarch64 10.40-1.fc37.1              fedora 219 k
 pcre2-syntax                  noarch  10.40-1.fc37.1              fedora 142 k
 perl-srpm-macros              noarch  1-46.fc37                   fedora 8.3 k
 pkgconf                       aarch64 1.8.0-3.fc37                fedora  41 k
 pkgconf-m4                    noarch  1.8.0-3.fc37                fedora  14 k
 pkgconf-pkg-config            aarch64 1.8.0-3.fc37                fedora  10 k
 popt                          aarch64 1.19~rc1-3.fc37             fedora  65 k
 publicsuffix-list-dafsa       noarch  20210518-5.fc37             fedora  58 k
 python-srpm-macros            noarch  3.11-4.fc37                 fedora  25 k
 qt5-srpm-macros               noarch  5.15.5-2.fc37               fedora 8.1 k
 readline                      aarch64 8.1-7.fc37                  fedora 209 k
 rpm                           aarch64 4.18.0-0.beta1.4.fc37       fedora 565 k
 rpm-build-libs                aarch64 4.18.0-0.beta1.4.fc37       fedora  90 k
 rpm-libs                      aarch64 4.18.0-0.beta1.4.fc37       fedora 311 k
 rpmautospec-rpm-macros        noarch  0.3.0-1.fc37                fedora 8.8 k
 rust-srpm-macros              noarch  22-1.fc37                   fedora 9.5 k
 setup                         noarch  2.14.1-2.fc37               fedora 149 k
 sqlite-libs                   aarch64 3.39.2-2.fc37               fedora 658 k
 systemd-libs                  aarch64 251.4-51.fc37               fedora 591 k
 tzdata                        noarch  2022a-4.fc37                fedora 719 k
 util-linux-core               aarch64 2.38.1-1.fc37               fedora 471 k
 xxhash-libs                   aarch64 0.8.1-3.fc37                fedora  33 k
 xz-libs                       aarch64 5.2.5-10.fc37               fedora  90 k
 zip                           aarch64 3.0-33.fc37                 fedora 256 k
 zlib                          aarch64 1.2.12-4.fc37               fedora  93 k
 zstd                          aarch64 1.5.2-3.fc37                fedora 412 k
Installing Groups:
 Buildsystem building group                                                    

Transaction Summary
================================================================================
Install  152 Packages

Total download size: 50 M
Installed size: 204 M
Downloading Packages:
(1/152): alternatives-1.19-3.fc37.aarch64.rpm   743 kB/s |  35 kB     00:00    
(2/152): ansible-srpm-macros-1-6.fc37.noarch.rp 155 kB/s | 7.5 kB     00:00    
(3/152): audit-libs-3.0.8-3.fc37.aarch64.rpm    2.1 MB/s | 116 kB     00:00    
(4/152): authselect-1.4.0-3.fc37.aarch64.rpm     19 MB/s | 144 kB     00:00    
(5/152): authselect-libs-1.4.0-3.fc37.aarch64.r  27 MB/s | 247 kB     00:00    
(6/152): basesystem-11-14.fc37.noarch.rpm       1.5 MB/s | 7.0 kB     00:00    
(7/152): bash-5.1.16-3.fc37.aarch64.rpm          67 MB/s | 1.7 MB     00:00    
(8/152): bzip2-1.0.8-12.fc37.aarch64.rpm        5.7 MB/s |  52 kB     00:00    
(9/152): binutils-gold-2.38-24.fc38.aarch64.rpm  18 MB/s | 924 kB     00:00    
(10/152): binutils-2.38-24.fc38.aarch64.rpm      89 MB/s | 5.8 MB     00:00    
(11/152): bzip2-libs-1.0.8-12.fc37.aarch64.rpm  1.8 MB/s |  43 kB     00:00    
(12/152): ca-certificates-2022.2.54-5.fc37.noar  43 MB/s | 829 kB     00:00    
(13/152): coreutils-9.1-6.fc37.aarch64.rpm       43 MB/s | 1.0 MB     00:00    
(14/152): cpio-2.13-13.fc37.aarch64.rpm          11 MB/s | 274 kB     00:00    
(15/152): coreutils-common-9.1-6.fc37.aarch64.r  53 MB/s | 2.0 MB     00:00    
(16/152): cracklib-2.9.6-28.fc36.aarch64.rpm    6.7 MB/s |  93 kB     00:00    
(17/152): crypto-policies-20220802-1.gita99dfd2  11 MB/s |  86 kB     00:00    
(18/152): curl-7.84.0-2.fc37.aarch64.rpm         53 MB/s | 309 kB     00:00    
(19/152): debugedit-5.0-5.fc37.aarch64.rpm       15 MB/s |  76 kB     00:00    
(20/152): cyrus-sasl-lib-2.1.28-7.fc37.aarch64.  62 MB/s | 777 kB     00:00    
(21/152): dwz-0.14-7.fc37.aarch64.rpm            25 MB/s | 126 kB     00:00    
(22/152): diffutils-3.8-3.fc37.aarch64.rpm       40 MB/s | 376 kB     00:00    
(23/152): ed-1.18-2.fc37.aarch64.rpm             11 MB/s |  78 kB     00:00    
(24/152): efi-srpm-macros-5-6.fc37.noarch.rpm   6.6 MB/s |  22 kB     00:00    
(25/152): elfutils-debuginfod-client-0.187-6.fc  11 MB/s |  38 kB     00:00    
(26/152): elfutils-default-yama-scope-0.187-6.f 4.2 MB/s |  17 kB     00:00    
(27/152): elfutils-0.187-6.fc37.aarch64.rpm      54 MB/s | 522 kB     00:00    
(28/152): elfutils-libelf-0.187-6.fc37.aarch64.  27 MB/s | 197 kB     00:00    
(29/152): elfutils-libs-0.187-6.fc37.aarch64.rp  39 MB/s | 256 kB     00:00    
(30/152): fedora-gpg-keys-38-0.2.noarch.rpm      22 MB/s | 125 kB     00:00    
(31/152): fedora-release-38-0.2.noarch.rpm      2.8 MB/s |  12 kB     00:00    
(32/152): fedora-release-common-38-0.2.noarch.r 7.0 MB/s |  22 kB     00:00    
(33/152): fedora-release-identity-basic-38-0.2. 2.2 MB/s |  12 kB     00:00    
(34/152): fedora-repos-rawhide-38-0.2.noarch.rp 1.9 MB/s | 9.6 kB     00:00    
(35/152): fedora-repos-38-0.2.noarch.rpm        1.4 MB/s |  10 kB     00:00    
(36/152): file-5.42-4.fc37.aarch64.rpm           13 MB/s |  49 kB     00:00    
(37/152): findutils-4.9.0-2.fc37.aarch64.rpm     61 MB/s | 493 kB     00:00    
(38/152): filesystem-3.18-2.fc37.aarch64.rpm     62 MB/s | 1.1 MB     00:00    
(39/152): fonts-srpm-macros-2.0.5-8.fc37.noarch 4.7 MB/s |  26 kB     00:00    
(40/152): file-libs-5.42-4.fc37.aarch64.rpm      26 MB/s | 674 kB     00:00    
(41/152): fpc-srpm-macros-1.3-6.fc37.noarch.rpm 1.3 MB/s | 7.7 kB     00:00    
(42/152): gdbm-libs-1.23-2.fc37.aarch64.rpm      15 MB/s |  57 kB     00:00    
(43/152): ghc-srpm-macros-1.5.0-7.fc37.noarch.r 2.0 MB/s | 7.8 kB     00:00    
(44/152): gdb-minimal-12.1-4.fc37.aarch64.rpm   116 MB/s | 3.5 MB     00:00    
(45/152): glibc-2.36-1.fc37.aarch64.rpm          74 MB/s | 1.8 MB     00:00    
(46/152): gawk-5.1.1-4.fc37.aarch64.rpm          18 MB/s | 1.0 MB     00:00    
(47/152): glibc-common-2.36-1.fc37.aarch64.rpm   26 MB/s | 355 kB     00:00    
(48/152): glibc-gconv-extra-2.36-1.fc37.aarch64 107 MB/s | 1.7 MB     00:00    
(49/152): gmp-6.2.1-3.fc37.aarch64.rpm           32 MB/s | 265 kB     00:00    
(50/152): glibc-minimal-langpack-2.36-1.fc37.aa 8.0 MB/s |  81 kB     00:00    
(51/152): gnat-srpm-macros-4-16.fc37.noarch.rpm 1.9 MB/s | 8.3 kB     00:00    
(52/152): go-srpm-macros-3.1.0-4.fc37.noarch.rp 6.9 MB/s |  27 kB     00:00    
(53/152): grep-3.7-4.fc37.aarch64.rpm            36 MB/s | 270 kB     00:00    
(54/152): info-6.8-4.fc37.aarch64.rpm            32 MB/s | 220 kB     00:00    
(55/152): jansson-2.13.1-5.fc37.aarch64.rpm      12 MB/s |  46 kB     00:00    
(56/152): gzip-1.12-2.fc37.aarch64.rpm           13 MB/s | 164 kB     00:00    
(57/152): kernel-srpm-macros-1.0-15.fc37.noarch 2.5 MB/s | 9.4 kB     00:00    
(58/152): keyutils-libs-1.6.1-5.fc37.aarch64.rp 5.9 MB/s |  31 kB     00:00    
(59/152): libacl-2.3.1-4.fc37.aarch64.rpm       3.5 MB/s |  23 kB     00:00    
(60/152): krb5-libs-1.19.2-11.fc37.1.aarch64.rp  57 MB/s | 733 kB     00:00    
(61/152): libarchive-3.6.1-2.fc37.aarch64.rpm    41 MB/s | 392 kB     00:00    
(62/152): libattr-2.5.1-5.fc37.aarch64.rpm      3.8 MB/s |  18 kB     00:00    
(63/152): libblkid-2.38.1-1.fc37.aarch64.rpm     25 MB/s | 106 kB     00:00    
(64/152): libbrotli-1.0.9-9.fc37.aarch64.rpm     42 MB/s | 318 kB     00:00    
(65/152): libcap-2.48-5.fc37.aarch64.rpm        9.4 MB/s |  67 kB     00:00    
(66/152): libcap-ng-0.8.3-3.fc37.aarch64.rpm    9.6 MB/s |  33 kB     00:00    
(67/152): libcom_err-1.46.5-3.fc37.aarch64.rpm  8.5 MB/s |  25 kB     00:00    
(68/152): libcurl-7.84.0-2.fc37.aarch64.rpm      28 MB/s | 301 kB     00:00    
(69/152): libdb-5.3.28-53.fc37.aarch64.rpm       67 MB/s | 737 kB     00:00    
(70/152): libeconf-0.4.0-4.fc37.aarch64.rpm     2.8 MB/s |  26 kB     00:00    
(71/152): libffi-3.4.2-9.fc37.aarch64.rpm       8.9 MB/s |  36 kB     00:00    
(72/152): libfdisk-2.38.1-1.fc37.aarch64.rpm     24 MB/s | 155 kB     00:00    
(73/152): libevent-2.1.12-7.fc37.aarch64.rpm     27 MB/s | 254 kB     00:00    
(74/152): libgcc-12.1.1-4.fc38.aarch64.rpm       18 MB/s |  92 kB     00:00    
(75/152): libgomp-12.1.1-4.fc38.aarch64.rpm      41 MB/s | 290 kB     00:00    
(76/152): libidn2-2.3.3-2.fc37.aarch64.rpm       21 MB/s | 114 kB     00:00    
(77/152): libmount-2.38.1-1.fc37.aarch64.rpm     20 MB/s | 133 kB     00:00    
(78/152): libnghttp2-1.48.0-2.fc37.aarch64.rpm   17 MB/s |  73 kB     00:00    
(79/152): libnsl2-2.0.0-4.fc37.aarch64.rpm      6.6 MB/s |  30 kB     00:00    
(80/152): libpkgconf-1.8.0-3.fc37.aarch64.rpm   6.9 MB/s |  36 kB     00:00    
(81/152): libpsl-0.21.1-6.fc37.aarch64.rpm       12 MB/s |  63 kB     00:00    
(82/152): libpwquality-1.4.4-11.fc37.aarch64.rp  20 MB/s | 116 kB     00:00    
(83/152): libselinux-3.4-5.fc37.aarch64.rpm     8.6 MB/s |  85 kB     00:00    
(84/152): libsemanage-3.4-5.fc37.aarch64.rpm     18 MB/s | 116 kB     00:00    
(85/152): libsigsegv-2.14-3.fc37.aarch64.rpm    7.6 MB/s |  27 kB     00:00    
(86/152): libsmartcols-2.38.1-1.fc37.aarch64.rp  15 MB/s |  63 kB     00:00    
(87/152): libsepol-3.4-3.fc37.aarch64.rpm        23 MB/s | 310 kB     00:00    
(88/152): libssh-0.9.6-5.fc37.aarch64.rpm        28 MB/s | 202 kB     00:00    
(89/152): libssh-config-0.9.6-5.fc37.noarch.rpm 1.6 MB/s | 7.8 kB     00:00    
(90/152): libstdc++-12.1.1-4.fc38.aarch64.rpm    76 MB/s | 760 kB     00:00    
(91/152): libtasn1-4.18.0-3.fc37.aarch64.rpm    9.7 MB/s |  73 kB     00:00    
(92/152): libtirpc-1.3.3-0.fc37.aarch64.rpm      13 MB/s |  94 kB     00:00    
(93/152): libutempter-1.2.1-7.fc37.aarch64.rpm  7.1 MB/s |  26 kB     00:00    
(94/152): libuuid-2.38.1-1.fc37.aarch64.rpm     5.3 MB/s |  28 kB     00:00    
(95/152): libunistring-1.0-2.fc37.aarch64.rpm    55 MB/s | 543 kB     00:00    
(96/152): libverto-0.3.2-4.fc37.aarch64.rpm     4.0 MB/s |  21 kB     00:00    
(97/152): libxcrypt-4.4.28-3.fc38.aarch64.rpm    15 MB/s | 121 kB     00:00    
(98/152): libxml2-2.9.14-3.fc37.aarch64.rpm      55 MB/s | 734 kB     00:00    
(99/152): libzstd-1.5.2-3.fc37.aarch64.rpm       20 MB/s | 267 kB     00:00    
(100/152): lua-libs-5.4.4-4.fc37.aarch64.rpm     19 MB/s | 213 kB     00:00    
(101/152): lua-srpm-macros-1-7.fc37.noarch.rpm  2.9 MB/s | 8.8 kB     00:00    
(102/152): lz4-libs-1.9.3-5.fc37.aarch64.rpm     16 MB/s |  70 kB     00:00    
(103/152): mpfr-4.1.0-10.fc37.aarch64.rpm        42 MB/s | 240 kB     00:00    
(104/152): ncurses-base-6.3-3.20220501.fc37.noa  18 MB/s |  86 kB     00:00    
(105/152): ncurses-libs-6.3-3.20220501.fc37.aar  54 MB/s | 318 kB     00:00    
(106/152): nim-srpm-macros-3-7.fc37.noarch.rpm  1.6 MB/s | 8.4 kB     00:00    
(107/152): ocaml-srpm-macros-7-2.fc37.noarch.rp 3.0 MB/s |  13 kB     00:00    
(108/152): openblas-srpm-macros-2-12.fc37.noarc 2.7 MB/s | 7.5 kB     00:00    
(109/152): openldap-2.6.2-5.fc38.aarch64.rpm     24 MB/s | 250 kB     00:00    
(110/152): p11-kit-0.24.1-3.fc37.aarch64.rpm     25 MB/s | 361 kB     00:00    
(111/152): openssl-libs-3.0.5-2.fc37.aarch64.rp  77 MB/s | 2.0 MB     00:00    
(112/152): p11-kit-trust-0.24.1-3.fc37.aarch64.  11 MB/s | 138 kB     00:00    
(113/152): package-notes-srpm-macros-0.4-16.fc3 1.6 MB/s |  11 kB     00:00    
(114/152): pam-libs-1.5.2-14.fc37.aarch64.rpm    13 MB/s |  58 kB     00:00    
(115/152): patch-2.7.6-17.fc37.aarch64.rpm       22 MB/s | 121 kB     00:00    
(116/152): pam-1.5.2-14.fc37.aarch64.rpm         46 MB/s | 567 kB     00:00    
(117/152): pcre-8.45-1.fc37.2.aarch64.rpm        27 MB/s | 184 kB     00:00    
(118/152): pcre2-10.40-1.fc37.1.aarch64.rpm      42 MB/s | 219 kB     00:00    
(119/152): perl-srpm-macros-1-46.fc37.noarch.rp 2.3 MB/s | 8.3 kB     00:00    
(120/152): pkgconf-1.8.0-3.fc37.aarch64.rpm      11 MB/s |  41 kB     00:00    
(121/152): pcre2-syntax-10.40-1.fc37.1.noarch.r  19 MB/s | 142 kB     00:00    
(122/152): pkgconf-m4-1.8.0-3.fc37.noarch.rpm   3.5 MB/s |  14 kB     00:00    
(123/152): pkgconf-pkg-config-1.8.0-3.fc37.aarc 2.6 MB/s |  10 kB     00:00    
(124/152): popt-1.19~rc1-3.fc37.aarch64.rpm      16 MB/s |  65 kB     00:00    
(125/152): publicsuffix-list-dafsa-20210518-5.f  13 MB/s |  58 kB     00:00    
(126/152): python-srpm-macros-3.11-4.fc37.noarc 7.3 MB/s |  25 kB     00:00    
(127/152): qt5-srpm-macros-5.15.5-2.fc37.noarch 2.3 MB/s | 8.1 kB     00:00    
(128/152): readline-8.1-7.fc37.aarch64.rpm       40 MB/s | 209 kB     00:00    
(129/152): redhat-rpm-config-227-1.fc37.noarch.  17 MB/s |  80 kB     00:00    
(130/152): rpm-4.18.0-0.beta1.4.fc37.aarch64.rp  70 MB/s | 565 kB     00:00    
(131/152): rpm-build-4.18.0-0.beta1.4.fc37.aarc  19 MB/s |  77 kB     00:00    
(132/152): rpm-build-libs-4.18.0-0.beta1.4.fc37  16 MB/s |  90 kB     00:00    
(133/152): rpm-libs-4.18.0-0.beta1.4.fc37.aarch  47 MB/s | 311 kB     00:00    
(134/152): rpmautospec-rpm-macros-0.3.0-1.fc37. 1.8 MB/s | 8.8 kB     00:00    
(135/152): rust-srpm-macros-22-1.fc37.noarch.rp 2.7 MB/s | 9.5 kB     00:00    
(136/152): sed-4.8-11.fc37.aarch64.rpm           58 MB/s | 304 kB     00:00    
(137/152): setup-2.14.1-2.fc37.noarch.rpm        13 MB/s | 149 kB     00:00    
(138/152): shadow-utils-4.11.1-4.fc37.aarch64.r  89 MB/s | 1.1 MB     00:00    
(139/152): sqlite-libs-3.39.2-2.fc37.aarch64.rp  69 MB/s | 658 kB     00:00    
(140/152): systemd-libs-251.4-51.fc37.aarch64.r  41 MB/s | 591 kB     00:00    
(141/152): tar-1.34-3.fc36.aarch64.rpm           54 MB/s | 877 kB     00:00    
(142/152): tzdata-2022a-4.fc37.noarch.rpm        59 MB/s | 719 kB     00:00    
(143/152): unzip-6.0-58.fc37.aarch64.rpm         23 MB/s | 182 kB     00:00    
(144/152): util-linux-core-2.38.1-1.fc37.aarch6  38 MB/s | 471 kB     00:00    
(145/152): which-2.21-35.fc37.aarch64.rpm       4.9 MB/s |  41 kB     00:00    
(146/152): util-linux-2.38.1-1.fc37.aarch64.rpm  78 MB/s | 2.3 MB     00:00    
(147/152): xxhash-libs-0.8.1-3.fc37.aarch64.rpm 2.5 MB/s |  33 kB     00:00    
(148/152): xz-5.2.5-10.fc37.aarch64.rpm          26 MB/s | 223 kB     00:00    
(149/152): xz-libs-5.2.5-10.fc37.aarch64.rpm     22 MB/s |  90 kB     00:00    
(150/152): zip-3.0-33.fc37.aarch64.rpm           38 MB/s | 256 kB     00:00    
(151/152): zlib-1.2.12-4.fc37.aarch64.rpm        14 MB/s |  93 kB     00:00    
(152/152): zstd-1.5.2-3.fc37.aarch64.rpm         26 MB/s | 412 kB     00:00    
--------------------------------------------------------------------------------
Total                                            67 MB/s |  50 MB     00:00     
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0xEB10B464:
 Userid     : "Fedora (38) <fedora-38-primary@fedoraproject.org>"
 Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary
Key imported successfully
fedora                                          1.6 MB/s | 1.6 kB     00:00    
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0x5323552A:
 Userid     : "Fedora (37) <fedora-37-primary@fedoraproject.org>"
 Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Running scriptlet: filesystem-3.18-2.fc37.aarch64                         1/1 
  Preparing        :                                                        1/1 
  Installing       : libgcc-12.1.1-4.fc38.aarch64                         1/152 
  Running scriptlet: libgcc-12.1.1-4.fc38.aarch64                         1/152 
  Installing       : crypto-policies-20220802-1.gita99dfd2.fc37.noarc     2/152 
  Running scriptlet: crypto-policies-20220802-1.gita99dfd2.fc37.noarc     2/152 
  Installing       : fedora-release-identity-basic-38-0.2.noarch          3/152 
  Installing       : tzdata-2022a-4.fc37.noarch                           4/152 
  Installing       : rust-srpm-macros-22-1.fc37.noarch                    5/152 
  Installing       : qt5-srpm-macros-5.15.5-2.fc37.noarch                 6/152 
  Installing       : publicsuffix-list-dafsa-20210518-5.fc37.noarch       7/152 
  Installing       : pkgconf-m4-1.8.0-3.fc37.noarch                       8/152 
  Installing       : perl-srpm-macros-1-46.fc37.noarch                    9/152 
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  Installing       : openblas-srpm-macros-2-12.fc37.noarch               11/152 
  Installing       : ocaml-srpm-macros-7-2.fc37.noarch                   12/152 
  Installing       : nim-srpm-macros-3-7.fc37.noarch                     13/152 
  Installing       : ncurses-base-6.3-3.20220501.fc37.noarch             14/152 
  Installing       : libssh-config-0.9.6-5.fc37.noarch                   15/152 
  Installing       : kernel-srpm-macros-1.0-15.fc37.noarch               16/152 
  Installing       : gnat-srpm-macros-4-16.fc37.noarch                   17/152 
  Installing       : ghc-srpm-macros-1.5.0-7.fc37.noarch                 18/152 
  Installing       : fpc-srpm-macros-1.3-6.fc37.noarch                   19/152 
  Installing       : fedora-gpg-keys-38-0.2.noarch                       20/152 
  Installing       : fedora-release-38-0.2.noarch                        21/152 
  Installing       : fedora-release-common-38-0.2.noarch                 22/152 
  Installing       : fedora-repos-rawhide-38-0.2.noarch                  23/152 
  Installing       : fedora-repos-38-0.2.noarch                          24/152 
  Installing       : setup-2.14.1-2.fc37.noarch                          25/152 
warning: /etc/hosts created as /etc/hosts.rpmnew

  Running scriptlet: setup-2.14.1-2.fc37.noarch                          25/152 
  Installing       : filesystem-3.18-2.fc37.aarch64                      26/152 
  Installing       : basesystem-11-14.fc37.noarch                        27/152 
  Installing       : glibc-gconv-extra-2.36-1.fc37.aarch64               28/152 
  Running scriptlet: glibc-gconv-extra-2.36-1.fc37.aarch64               28/152 
  Installing       : glibc-minimal-langpack-2.36-1.fc37.aarch64          29/152 
  Installing       : glibc-common-2.36-1.fc37.aarch64                    30/152 
  Running scriptlet: glibc-2.36-1.fc37.aarch64                           31/152 
  Installing       : glibc-2.36-1.fc37.aarch64                           31/152 
  Running scriptlet: glibc-2.36-1.fc37.aarch64                           31/152 
  Installing       : ncurses-libs-6.3-3.20220501.fc37.aarch64            32/152 
  Installing       : bash-5.1.16-3.fc37.aarch64                          33/152 
  Running scriptlet: bash-5.1.16-3.fc37.aarch64                          33/152 
  Installing       : zlib-1.2.12-4.fc37.aarch64                          34/152 
  Installing       : xz-libs-5.2.5-10.fc37.aarch64                       35/152 
  Installing       : bzip2-libs-1.0.8-12.fc37.aarch64                    36/152 
  Installing       : elfutils-libelf-0.187-6.fc37.aarch64                37/152 
  Installing       : libstdc++-12.1.1-4.fc38.aarch64                     38/152 
  Installing       : libuuid-2.38.1-1.fc37.aarch64                       39/152 
  Installing       : libzstd-1.5.2-3.fc37.aarch64                        40/152 
  Installing       : popt-1.19~rc1-3.fc37.aarch64                        41/152 
  Installing       : libblkid-2.38.1-1.fc37.aarch64                      42/152 
  Installing       : readline-8.1-7.fc37.aarch64                         43/152 
  Installing       : gmp-1:6.2.1-3.fc37.aarch64                          44/152 
  Installing       : libattr-2.5.1-5.fc37.aarch64                        45/152 
  Installing       : libacl-2.3.1-4.fc37.aarch64                         46/152 
  Installing       : libcap-2.48-5.fc37.aarch64                          47/152 
  Installing       : libxcrypt-4.4.28-3.fc38.aarch64                     48/152 
  Installing       : lz4-libs-1.9.3-5.fc37.aarch64                       49/152 
  Installing       : systemd-libs-251.4-51.fc37.aarch64                  50/152 
  Installing       : mpfr-4.1.0-10.fc37.aarch64                          51/152 
  Installing       : dwz-0.14-7.fc37.aarch64                             52/152 
  Installing       : unzip-6.0-58.fc37.aarch64                           53/152 
  Installing       : file-libs-5.42-4.fc37.aarch64                       54/152 
  Installing       : file-5.42-4.fc37.aarch64                            55/152 
  Installing       : sqlite-libs-3.39.2-2.fc37.aarch64                   56/152 
  Installing       : alternatives-1.19-3.fc37.aarch64                    57/152 
  Installing       : libcap-ng-0.8.3-3.fc37.aarch64                      58/152 
  Installing       : audit-libs-3.0.8-3.fc37.aarch64                     59/152 
  Installing       : libcom_err-1.46.5-3.fc37.aarch64                    60/152 
  Installing       : libeconf-0.4.0-4.fc37.aarch64                       61/152 
  Installing       : pam-libs-1.5.2-14.fc37.aarch64                      62/152 
  Installing       : libsepol-3.4-3.fc37.aarch64                         63/152 
  Installing       : libsmartcols-2.38.1-1.fc37.aarch64                  64/152 
  Installing       : libunistring-1.0-2.fc37.aarch64                     65/152 
  Installing       : libidn2-2.3.3-2.fc37.aarch64                        66/152 
  Installing       : lua-libs-5.4.4-4.fc37.aarch64                       67/152 
  Installing       : libpsl-0.21.1-6.fc37.aarch64                        68/152 
  Installing       : zip-3.0-33.fc37.aarch64                             69/152 
  Installing       : zstd-1.5.2-3.fc37.aarch64                           70/152 
  Installing       : libfdisk-2.38.1-1.fc37.aarch64                      71/152 
  Installing       : bzip2-1.0.8-12.fc37.aarch64                         72/152 
  Installing       : libxml2-2.9.14-3.fc37.aarch64                       73/152 
  Installing       : ed-1.18-2.fc37.aarch64                              74/152 
  Installing       : elfutils-default-yama-scope-0.187-6.fc37.noarch     75/152 
  Running scriptlet: elfutils-default-yama-scope-0.187-6.fc37.noarch     75/152 
  Installing       : package-notes-srpm-macros-0.4-16.fc37.noarch        76/152 
  Installing       : cpio-2.13-13.fc37.aarch64                           77/152 
  Installing       : diffutils-3.8-3.fc37.aarch64                        78/152 
  Installing       : gdbm-libs-1:1.23-2.fc37.aarch64                     79/152 
  Installing       : cyrus-sasl-lib-2.1.28-7.fc37.aarch64                80/152 
  Installing       : jansson-2.13.1-5.fc37.aarch64                       81/152 
  Installing       : keyutils-libs-1.6.1-5.fc37.aarch64                  82/152 
  Installing       : libbrotli-1.0.9-9.fc37.aarch64                      83/152 
  Installing       : libdb-5.3.28-53.fc37.aarch64                        84/152 
  Installing       : libffi-3.4.2-9.fc37.aarch64                         85/152 
  Installing       : p11-kit-0.24.1-3.fc37.aarch64                       86/152 
  Installing       : libgomp-12.1.1-4.fc38.aarch64                       87/152 
  Installing       : libnghttp2-1.48.0-2.fc37.aarch64                    88/152 
  Installing       : libpkgconf-1.8.0-3.fc37.aarch64                     89/152 
  Installing       : pkgconf-1.8.0-3.fc37.aarch64                        90/152 
  Installing       : pkgconf-pkg-config-1.8.0-3.fc37.aarch64             91/152 
  Installing       : libsigsegv-2.14-3.fc37.aarch64                      92/152 
  Installing       : gawk-5.1.1-4.fc37.aarch64                           93/152 
  Installing       : libtasn1-4.18.0-3.fc37.aarch64                      94/152 
  Installing       : p11-kit-trust-0.24.1-3.fc37.aarch64                 95/152 
  Running scriptlet: p11-kit-trust-0.24.1-3.fc37.aarch64                 95/152 
  Installing       : libverto-0.3.2-4.fc37.aarch64                       96/152 
  Installing       : pcre-8.45-1.fc37.2.aarch64                          97/152 
  Installing       : grep-3.7-4.fc37.aarch64                             98/152 
  Installing       : xz-5.2.5-10.fc37.aarch64                            99/152 
  Installing       : pcre2-10.40-1.fc37.1.aarch64                       100/152 
  Installing       : libselinux-3.4-5.fc37.aarch64                      101/152 
  Installing       : sed-4.8-11.fc37.aarch64                            102/152 
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  Installing       : libmount-2.38.1-1.fc37.aarch64                     104/152 
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  Installing       : libsemanage-3.4-5.fc37.aarch64                     106/152 
  Installing       : shadow-utils-2:4.11.1-4.fc37.aarch64               107/152 
  Running scriptlet: libutempter-1.2.1-7.fc37.aarch64                   108/152 
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  Installing       : patch-2.7.6-17.fc37.aarch64                        109/152 
  Installing       : tar-2:1.34-3.fc36.aarch64                          110/152 
  Installing       : xxhash-libs-0.8.1-3.fc37.aarch64                   111/152 
  Installing       : coreutils-common-9.1-6.fc37.aarch64                112/152 
  Installing       : openssl-libs-1:3.0.5-2.fc37.aarch64                113/152 
  Installing       : coreutils-9.1-6.fc37.aarch64                       114/152 
  Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch            115/152 
  Installing       : ca-certificates-2022.2.54-5.fc37.noarch            115/152 
  Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch            115/152 
  Installing       : krb5-libs-1.19.2-11.fc37.1.aarch64                 116/152 
  Installing       : libtirpc-1.3.3-0.fc37.aarch64                      117/152 
  Running scriptlet: authselect-libs-1.4.0-3.fc37.aarch64               118/152 
  Installing       : authselect-libs-1.4.0-3.fc37.aarch64               118/152 
  Installing       : gzip-1.12-2.fc37.aarch64                           119/152 
  Installing       : cracklib-2.9.6-28.fc36.aarch64                     120/152 
  Installing       : libpwquality-1.4.4-11.fc37.aarch64                 121/152 
  Installing       : authselect-1.4.0-3.fc37.aarch64                    122/152 
  Installing       : libnsl2-2.0.0-4.fc37.aarch64                       123/152 
  Installing       : pam-1.5.2-14.fc37.aarch64                          124/152 
  Installing       : libssh-0.9.6-5.fc37.aarch64                        125/152 
  Installing       : libarchive-3.6.1-2.fc37.aarch64                    126/152 
  Installing       : libevent-2.1.12-7.fc37.aarch64                     127/152 
  Installing       : openldap-2.6.2-5.fc38.aarch64                      128/152 
  Installing       : libcurl-7.84.0-2.fc37.aarch64                      129/152 
  Installing       : elfutils-libs-0.187-6.fc37.aarch64                 130/152 
  Installing       : elfutils-debuginfod-client-0.187-6.fc37.aarch64    131/152 
  Installing       : binutils-gold-2.38-24.fc38.aarch64                 132/152 
  Installing       : binutils-2.38-24.fc38.aarch64                      133/152 
  Running scriptlet: binutils-2.38-24.fc38.aarch64                      133/152 
  Installing       : elfutils-0.187-6.fc37.aarch64                      134/152 
  Installing       : gdb-minimal-12.1-4.fc37.aarch64                    135/152 
  Installing       : debugedit-5.0-5.fc37.aarch64                       136/152 
  Installing       : curl-7.84.0-2.fc37.aarch64                         137/152 
  Running scriptlet: rpm-4.18.0-0.beta1.4.fc37.aarch64                  138/152 
  Installing       : rpm-4.18.0-0.beta1.4.fc37.aarch64                  138/152 
  Installing       : rpm-libs-4.18.0-0.beta1.4.fc37.aarch64             139/152 
  Installing       : rpm-build-libs-4.18.0-0.beta1.4.fc37.aarch64       140/152 
  Installing       : efi-srpm-macros-5-6.fc37.noarch                    141/152 
  Installing       : lua-srpm-macros-1-7.fc37.noarch                    142/152 
  Installing       : rpmautospec-rpm-macros-0.3.0-1.fc37.noarch         143/152 
  Installing       : ansible-srpm-macros-1-6.fc37.noarch                144/152 
  Installing       : fonts-srpm-macros-1:2.0.5-8.fc37.noarch            145/152 
  Installing       : go-srpm-macros-3.1.0-4.fc37.noarch                 146/152 
  Installing       : python-srpm-macros-3.11-4.fc37.noarch              147/152 
  Installing       : redhat-rpm-config-227-1.fc37.noarch                148/152 
  Installing       : rpm-build-4.18.0-0.beta1.4.fc37.aarch64            149/152 
  Installing       : util-linux-2.38.1-1.fc37.aarch64                   150/152 
  Installing       : which-2.21-35.fc37.aarch64                         151/152 
  Installing       : info-6.8-4.fc37.aarch64                            152/152 
  Running scriptlet: filesystem-3.18-2.fc37.aarch64                     152/152 
  Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch            152/152 
  Running scriptlet: authselect-libs-1.4.0-3.fc37.aarch64               152/152 
  Running scriptlet: rpm-4.18.0-0.beta1.4.fc37.aarch64                  152/152 
  Running scriptlet: info-6.8-4.fc37.aarch64                            152/152 
  Verifying        : alternatives-1.19-3.fc37.aarch64                     1/152 
  Verifying        : ansible-srpm-macros-1-6.fc37.noarch                  2/152 
  Verifying        : audit-libs-3.0.8-3.fc37.aarch64                      3/152 
  Verifying        : authselect-1.4.0-3.fc37.aarch64                      4/152 
  Verifying        : authselect-libs-1.4.0-3.fc37.aarch64                 5/152 
  Verifying        : basesystem-11-14.fc37.noarch                         6/152 
  Verifying        : bash-5.1.16-3.fc37.aarch64                           7/152 
  Verifying        : binutils-2.38-24.fc38.aarch64                        8/152 
  Verifying        : binutils-gold-2.38-24.fc38.aarch64                   9/152 
  Verifying        : bzip2-1.0.8-12.fc37.aarch64                         10/152 
  Verifying        : bzip2-libs-1.0.8-12.fc37.aarch64                    11/152 
  Verifying        : ca-certificates-2022.2.54-5.fc37.noarch             12/152 
  Verifying        : coreutils-9.1-6.fc37.aarch64                        13/152 
  Verifying        : coreutils-common-9.1-6.fc37.aarch64                 14/152 
  Verifying        : cpio-2.13-13.fc37.aarch64                           15/152 
  Verifying        : cracklib-2.9.6-28.fc36.aarch64                      16/152 
  Verifying        : crypto-policies-20220802-1.gita99dfd2.fc37.noarc    17/152 
  Verifying        : curl-7.84.0-2.fc37.aarch64                          18/152 
  Verifying        : cyrus-sasl-lib-2.1.28-7.fc37.aarch64                19/152 
  Verifying        : debugedit-5.0-5.fc37.aarch64                        20/152 
  Verifying        : diffutils-3.8-3.fc37.aarch64                        21/152 
  Verifying        : dwz-0.14-7.fc37.aarch64                             22/152 
  Verifying        : ed-1.18-2.fc37.aarch64                              23/152 
  Verifying        : efi-srpm-macros-5-6.fc37.noarch                     24/152 
  Verifying        : elfutils-0.187-6.fc37.aarch64                       25/152 
  Verifying        : elfutils-debuginfod-client-0.187-6.fc37.aarch64     26/152 
  Verifying        : elfutils-default-yama-scope-0.187-6.fc37.noarch     27/152 
  Verifying        : elfutils-libelf-0.187-6.fc37.aarch64                28/152 
  Verifying        : elfutils-libs-0.187-6.fc37.aarch64                  29/152 
  Verifying        : fedora-gpg-keys-38-0.2.noarch                       30/152 
  Verifying        : fedora-release-38-0.2.noarch                        31/152 
  Verifying        : fedora-release-common-38-0.2.noarch                 32/152 
  Verifying        : fedora-release-identity-basic-38-0.2.noarch         33/152 
  Verifying        : fedora-repos-38-0.2.noarch                          34/152 
  Verifying        : fedora-repos-rawhide-38-0.2.noarch                  35/152 
  Verifying        : file-5.42-4.fc37.aarch64                            36/152 
  Verifying        : file-libs-5.42-4.fc37.aarch64                       37/152 
  Verifying        : filesystem-3.18-2.fc37.aarch64                      38/152 
  Verifying        : findutils-1:4.9.0-2.fc37.aarch64                    39/152 
  Verifying        : fonts-srpm-macros-1:2.0.5-8.fc37.noarch             40/152 
  Verifying        : fpc-srpm-macros-1.3-6.fc37.noarch                   41/152 
  Verifying        : gawk-5.1.1-4.fc37.aarch64                           42/152 
  Verifying        : gdb-minimal-12.1-4.fc37.aarch64                     43/152 
  Verifying        : gdbm-libs-1:1.23-2.fc37.aarch64                     44/152 
  Verifying        : ghc-srpm-macros-1.5.0-7.fc37.noarch                 45/152 
  Verifying        : glibc-2.36-1.fc37.aarch64                           46/152 
  Verifying        : glibc-common-2.36-1.fc37.aarch64                    47/152 
  Verifying        : glibc-gconv-extra-2.36-1.fc37.aarch64               48/152 
  Verifying        : glibc-minimal-langpack-2.36-1.fc37.aarch64          49/152 
  Verifying        : gmp-1:6.2.1-3.fc37.aarch64                          50/152 
  Verifying        : gnat-srpm-macros-4-16.fc37.noarch                   51/152 
  Verifying        : go-srpm-macros-3.1.0-4.fc37.noarch                  52/152 
  Verifying        : grep-3.7-4.fc37.aarch64                             53/152 
  Verifying        : gzip-1.12-2.fc37.aarch64                            54/152 
  Verifying        : info-6.8-4.fc37.aarch64                             55/152 
  Verifying        : jansson-2.13.1-5.fc37.aarch64                       56/152 
  Verifying        : kernel-srpm-macros-1.0-15.fc37.noarch               57/152 
  Verifying        : keyutils-libs-1.6.1-5.fc37.aarch64                  58/152 
  Verifying        : krb5-libs-1.19.2-11.fc37.1.aarch64                  59/152 
  Verifying        : libacl-2.3.1-4.fc37.aarch64                         60/152 
  Verifying        : libarchive-3.6.1-2.fc37.aarch64                     61/152 
  Verifying        : libattr-2.5.1-5.fc37.aarch64                        62/152 
  Verifying        : libblkid-2.38.1-1.fc37.aarch64                      63/152 
  Verifying        : libbrotli-1.0.9-9.fc37.aarch64                      64/152 
  Verifying        : libcap-2.48-5.fc37.aarch64                          65/152 
  Verifying        : libcap-ng-0.8.3-3.fc37.aarch64                      66/152 
  Verifying        : libcom_err-1.46.5-3.fc37.aarch64                    67/152 
  Verifying        : libcurl-7.84.0-2.fc37.aarch64                       68/152 
  Verifying        : libdb-5.3.28-53.fc37.aarch64                        69/152 
  Verifying        : libeconf-0.4.0-4.fc37.aarch64                       70/152 
  Verifying        : libevent-2.1.12-7.fc37.aarch64                      71/152 
  Verifying        : libfdisk-2.38.1-1.fc37.aarch64                      72/152 
  Verifying        : libffi-3.4.2-9.fc37.aarch64                         73/152 
  Verifying        : libgcc-12.1.1-4.fc38.aarch64                        74/152 
  Verifying        : libgomp-12.1.1-4.fc38.aarch64                       75/152 
  Verifying        : libidn2-2.3.3-2.fc37.aarch64                        76/152 
  Verifying        : libmount-2.38.1-1.fc37.aarch64                      77/152 
  Verifying        : libnghttp2-1.48.0-2.fc37.aarch64                    78/152 
  Verifying        : libnsl2-2.0.0-4.fc37.aarch64                        79/152 
  Verifying        : libpkgconf-1.8.0-3.fc37.aarch64                     80/152 
  Verifying        : libpsl-0.21.1-6.fc37.aarch64                        81/152 
  Verifying        : libpwquality-1.4.4-11.fc37.aarch64                  82/152 
  Verifying        : libselinux-3.4-5.fc37.aarch64                       83/152 
  Verifying        : libsemanage-3.4-5.fc37.aarch64                      84/152 
  Verifying        : libsepol-3.4-3.fc37.aarch64                         85/152 
  Verifying        : libsigsegv-2.14-3.fc37.aarch64                      86/152 
  Verifying        : libsmartcols-2.38.1-1.fc37.aarch64                  87/152 
  Verifying        : libssh-0.9.6-5.fc37.aarch64                         88/152 
  Verifying        : libssh-config-0.9.6-5.fc37.noarch                   89/152 
  Verifying        : libstdc++-12.1.1-4.fc38.aarch64                     90/152 
  Verifying        : libtasn1-4.18.0-3.fc37.aarch64                      91/152 
  Verifying        : libtirpc-1.3.3-0.fc37.aarch64                       92/152 
  Verifying        : libunistring-1.0-2.fc37.aarch64                     93/152 
  Verifying        : libutempter-1.2.1-7.fc37.aarch64                    94/152 
  Verifying        : libuuid-2.38.1-1.fc37.aarch64                       95/152 
  Verifying        : libverto-0.3.2-4.fc37.aarch64                       96/152 
  Verifying        : libxcrypt-4.4.28-3.fc38.aarch64                     97/152 
  Verifying        : libxml2-2.9.14-3.fc37.aarch64                       98/152 
  Verifying        : libzstd-1.5.2-3.fc37.aarch64                        99/152 
  Verifying        : lua-libs-5.4.4-4.fc37.aarch64                      100/152 
  Verifying        : lua-srpm-macros-1-7.fc37.noarch                    101/152 
  Verifying        : lz4-libs-1.9.3-5.fc37.aarch64                      102/152 
  Verifying        : mpfr-4.1.0-10.fc37.aarch64                         103/152 
  Verifying        : ncurses-base-6.3-3.20220501.fc37.noarch            104/152 
  Verifying        : ncurses-libs-6.3-3.20220501.fc37.aarch64           105/152 
  Verifying        : nim-srpm-macros-3-7.fc37.noarch                    106/152 
  Verifying        : ocaml-srpm-macros-7-2.fc37.noarch                  107/152 
  Verifying        : openblas-srpm-macros-2-12.fc37.noarch              108/152 
  Verifying        : openldap-2.6.2-5.fc38.aarch64                      109/152 
  Verifying        : openssl-libs-1:3.0.5-2.fc37.aarch64                110/152 
  Verifying        : p11-kit-0.24.1-3.fc37.aarch64                      111/152 
  Verifying        : p11-kit-trust-0.24.1-3.fc37.aarch64                112/152 
  Verifying        : package-notes-srpm-macros-0.4-16.fc37.noarch       113/152 
  Verifying        : pam-1.5.2-14.fc37.aarch64                          114/152 
  Verifying        : pam-libs-1.5.2-14.fc37.aarch64                     115/152 
  Verifying        : patch-2.7.6-17.fc37.aarch64                        116/152 
  Verifying        : pcre-8.45-1.fc37.2.aarch64                         117/152 
  Verifying        : pcre2-10.40-1.fc37.1.aarch64                       118/152 
  Verifying        : pcre2-syntax-10.40-1.fc37.1.noarch                 119/152 
  Verifying        : perl-srpm-macros-1-46.fc37.noarch                  120/152 
  Verifying        : pkgconf-1.8.0-3.fc37.aarch64                       121/152 
  Verifying        : pkgconf-m4-1.8.0-3.fc37.noarch                     122/152 
  Verifying        : pkgconf-pkg-config-1.8.0-3.fc37.aarch64            123/152 
  Verifying        : popt-1.19~rc1-3.fc37.aarch64                       124/152 
  Verifying        : publicsuffix-list-dafsa-20210518-5.fc37.noarch     125/152 
  Verifying        : python-srpm-macros-3.11-4.fc37.noarch              126/152 
  Verifying        : qt5-srpm-macros-5.15.5-2.fc37.noarch               127/152 
  Verifying        : readline-8.1-7.fc37.aarch64                        128/152 
  Verifying        : redhat-rpm-config-227-1.fc37.noarch                129/152 
  Verifying        : rpm-4.18.0-0.beta1.4.fc37.aarch64                  130/152 
  Verifying        : rpm-build-4.18.0-0.beta1.4.fc37.aarch64            131/152 
  Verifying        : rpm-build-libs-4.18.0-0.beta1.4.fc37.aarch64       132/152 
  Verifying        : rpm-libs-4.18.0-0.beta1.4.fc37.aarch64             133/152 
  Verifying        : rpmautospec-rpm-macros-0.3.0-1.fc37.noarch         134/152 
  Verifying        : rust-srpm-macros-22-1.fc37.noarch                  135/152 
  Verifying        : sed-4.8-11.fc37.aarch64                            136/152 
  Verifying        : setup-2.14.1-2.fc37.noarch                         137/152 
  Verifying        : shadow-utils-2:4.11.1-4.fc37.aarch64               138/152 
  Verifying        : sqlite-libs-3.39.2-2.fc37.aarch64                  139/152 
  Verifying        : systemd-libs-251.4-51.fc37.aarch64                 140/152 
  Verifying        : tar-2:1.34-3.fc36.aarch64                          141/152 
  Verifying        : tzdata-2022a-4.fc37.noarch                         142/152 
  Verifying        : unzip-6.0-58.fc37.aarch64                          143/152 
  Verifying        : util-linux-2.38.1-1.fc37.aarch64                   144/152 
  Verifying        : util-linux-core-2.38.1-1.fc37.aarch64              145/152 
  Verifying        : which-2.21-35.fc37.aarch64                         146/152 
  Verifying        : xxhash-libs-0.8.1-3.fc37.aarch64                   147/152 
  Verifying        : xz-5.2.5-10.fc37.aarch64                           148/152 
  Verifying        : xz-libs-5.2.5-10.fc37.aarch64                      149/152 
  Verifying        : zip-3.0-33.fc37.aarch64                            150/152 
  Verifying        : zlib-1.2.12-4.fc37.aarch64                         151/152 
  Verifying        : zstd-1.5.2-3.fc37.aarch64                          152/152 
Installed products updated.

Installed:
  alternatives-1.19-3.fc37.aarch64                                              
  ansible-srpm-macros-1-6.fc37.noarch                                           
  audit-libs-3.0.8-3.fc37.aarch64                                               
  authselect-1.4.0-3.fc37.aarch64                                               
  authselect-libs-1.4.0-3.fc37.aarch64                                          
  basesystem-11-14.fc37.noarch                                                  
  bash-5.1.16-3.fc37.aarch64                                                    
  binutils-2.38-24.fc38.aarch64                                                 
  binutils-gold-2.38-24.fc38.aarch64                                            
  bzip2-1.0.8-12.fc37.aarch64                                                   
  bzip2-libs-1.0.8-12.fc37.aarch64                                              
  ca-certificates-2022.2.54-5.fc37.noarch                                       
  coreutils-9.1-6.fc37.aarch64                                                  
  coreutils-common-9.1-6.fc37.aarch64                                           
  cpio-2.13-13.fc37.aarch64                                                     
  cracklib-2.9.6-28.fc36.aarch64                                                
  crypto-policies-20220802-1.gita99dfd2.fc37.noarch                             
  curl-7.84.0-2.fc37.aarch64                                                    
  cyrus-sasl-lib-2.1.28-7.fc37.aarch64                                          
  debugedit-5.0-5.fc37.aarch64                                                  
  diffutils-3.8-3.fc37.aarch64                                                  
  dwz-0.14-7.fc37.aarch64                                                       
  ed-1.18-2.fc37.aarch64                                                        
  efi-srpm-macros-5-6.fc37.noarch                                               
  elfutils-0.187-6.fc37.aarch64                                                 
  elfutils-debuginfod-client-0.187-6.fc37.aarch64                               
  elfutils-default-yama-scope-0.187-6.fc37.noarch                               
  elfutils-libelf-0.187-6.fc37.aarch64                                          
  elfutils-libs-0.187-6.fc37.aarch64                                            
  fedora-gpg-keys-38-0.2.noarch                                                 
  fedora-release-38-0.2.noarch                                                  
  fedora-release-common-38-0.2.noarch                                           
  fedora-release-identity-basic-38-0.2.noarch                                   
  fedora-repos-38-0.2.noarch                                                    
  fedora-repos-rawhide-38-0.2.noarch                                            
  file-5.42-4.fc37.aarch64                                                      
  file-libs-5.42-4.fc37.aarch64                                                 
  filesystem-3.18-2.fc37.aarch64                                                
  findutils-1:4.9.0-2.fc37.aarch64                                              
  fonts-srpm-macros-1:2.0.5-8.fc37.noarch                                       
  fpc-srpm-macros-1.3-6.fc37.noarch                                             
  gawk-5.1.1-4.fc37.aarch64                                                     
  gdb-minimal-12.1-4.fc37.aarch64                                               
  gdbm-libs-1:1.23-2.fc37.aarch64                                               
  ghc-srpm-macros-1.5.0-7.fc37.noarch                                           
  glibc-2.36-1.fc37.aarch64                                                     
  glibc-common-2.36-1.fc37.aarch64                                              
  glibc-gconv-extra-2.36-1.fc37.aarch64                                         
  glibc-minimal-langpack-2.36-1.fc37.aarch64                                    
  gmp-1:6.2.1-3.fc37.aarch64                                                    
  gnat-srpm-macros-4-16.fc37.noarch                                             
  go-srpm-macros-3.1.0-4.fc37.noarch                                            
  grep-3.7-4.fc37.aarch64                                                       
  gzip-1.12-2.fc37.aarch64                                                      
  info-6.8-4.fc37.aarch64                                                       
  jansson-2.13.1-5.fc37.aarch64                                                 
  kernel-srpm-macros-1.0-15.fc37.noarch                                         
  keyutils-libs-1.6.1-5.fc37.aarch64                                            
  krb5-libs-1.19.2-11.fc37.1.aarch64                                            
  libacl-2.3.1-4.fc37.aarch64                                                   
  libarchive-3.6.1-2.fc37.aarch64                                               
  libattr-2.5.1-5.fc37.aarch64                                                  
  libblkid-2.38.1-1.fc37.aarch64                                                
  libbrotli-1.0.9-9.fc37.aarch64                                                
  libcap-2.48-5.fc37.aarch64                                                    
  libcap-ng-0.8.3-3.fc37.aarch64                                                
  libcom_err-1.46.5-3.fc37.aarch64                                              
  libcurl-7.84.0-2.fc37.aarch64                                                 
  libdb-5.3.28-53.fc37.aarch64                                                  
  libeconf-0.4.0-4.fc37.aarch64                                                 
  libevent-2.1.12-7.fc37.aarch64                                                
  libfdisk-2.38.1-1.fc37.aarch64                                                
  libffi-3.4.2-9.fc37.aarch64                                                   
  libgcc-12.1.1-4.fc38.aarch64                                                  
  libgomp-12.1.1-4.fc38.aarch64                                                 
  libidn2-2.3.3-2.fc37.aarch64                                                  
  libmount-2.38.1-1.fc37.aarch64                                                
  libnghttp2-1.48.0-2.fc37.aarch64                                              
  libnsl2-2.0.0-4.fc37.aarch64                                                  
  libpkgconf-1.8.0-3.fc37.aarch64                                               
  libpsl-0.21.1-6.fc37.aarch64                                                  
  libpwquality-1.4.4-11.fc37.aarch64                                            
  libselinux-3.4-5.fc37.aarch64                                                 
  libsemanage-3.4-5.fc37.aarch64                                                
  libsepol-3.4-3.fc37.aarch64                                                   
  libsigsegv-2.14-3.fc37.aarch64                                                
  libsmartcols-2.38.1-1.fc37.aarch64                                            
  libssh-0.9.6-5.fc37.aarch64                                                   
  libssh-config-0.9.6-5.fc37.noarch                                             
  libstdc++-12.1.1-4.fc38.aarch64                                               
  libtasn1-4.18.0-3.fc37.aarch64                                                
  libtirpc-1.3.3-0.fc37.aarch64                                                 
  libunistring-1.0-2.fc37.aarch64                                               
  libutempter-1.2.1-7.fc37.aarch64                                              
  libuuid-2.38.1-1.fc37.aarch64                                                 
  libverto-0.3.2-4.fc37.aarch64                                                 
  libxcrypt-4.4.28-3.fc38.aarch64                                               
  libxml2-2.9.14-3.fc37.aarch64                                                 
  libzstd-1.5.2-3.fc37.aarch64                                                  
  lua-libs-5.4.4-4.fc37.aarch64                                                 
  lua-srpm-macros-1-7.fc37.noarch                                               
  lz4-libs-1.9.3-5.fc37.aarch64                                                 
  mpfr-4.1.0-10.fc37.aarch64                                                    
  ncurses-base-6.3-3.20220501.fc37.noarch                                       
  ncurses-libs-6.3-3.20220501.fc37.aarch64                                      
  nim-srpm-macros-3-7.fc37.noarch                                               
  ocaml-srpm-macros-7-2.fc37.noarch                                             
  openblas-srpm-macros-2-12.fc37.noarch                                         
  openldap-2.6.2-5.fc38.aarch64                                                 
  openssl-libs-1:3.0.5-2.fc37.aarch64                                           
  p11-kit-0.24.1-3.fc37.aarch64                                                 
  p11-kit-trust-0.24.1-3.fc37.aarch64                                           
  package-notes-srpm-macros-0.4-16.fc37.noarch                                  
  pam-1.5.2-14.fc37.aarch64                                                     
  pam-libs-1.5.2-14.fc37.aarch64                                                
  patch-2.7.6-17.fc37.aarch64                                                   
  pcre-8.45-1.fc37.2.aarch64                                                    
  pcre2-10.40-1.fc37.1.aarch64                                                  
  pcre2-syntax-10.40-1.fc37.1.noarch                                            
  perl-srpm-macros-1-46.fc37.noarch                                             
  pkgconf-1.8.0-3.fc37.aarch64                                                  
  pkgconf-m4-1.8.0-3.fc37.noarch                                                
  pkgconf-pkg-config-1.8.0-3.fc37.aarch64                                       
  popt-1.19~rc1-3.fc37.aarch64                                                  
  publicsuffix-list-dafsa-20210518-5.fc37.noarch                                
  python-srpm-macros-3.11-4.fc37.noarch                                         
  qt5-srpm-macros-5.15.5-2.fc37.noarch                                          
  readline-8.1-7.fc37.aarch64                                                   
  redhat-rpm-config-227-1.fc37.noarch                                           
  rpm-4.18.0-0.beta1.4.fc37.aarch64                                             
  rpm-build-4.18.0-0.beta1.4.fc37.aarch64                                       
  rpm-build-libs-4.18.0-0.beta1.4.fc37.aarch64                                  
  rpm-libs-4.18.0-0.beta1.4.fc37.aarch64                                        
  rpmautospec-rpm-macros-0.3.0-1.fc37.noarch                                    
  rust-srpm-macros-22-1.fc37.noarch                                             
  sed-4.8-11.fc37.aarch64                                                       
  setup-2.14.1-2.fc37.noarch                                                    
  shadow-utils-2:4.11.1-4.fc37.aarch64                                          
  sqlite-libs-3.39.2-2.fc37.aarch64                                             
  systemd-libs-251.4-51.fc37.aarch64                                            
  tar-2:1.34-3.fc36.aarch64                                                     
  tzdata-2022a-4.fc37.noarch                                                    
  unzip-6.0-58.fc37.aarch64                                                     
  util-linux-2.38.1-1.fc37.aarch64                                              
  util-linux-core-2.38.1-1.fc37.aarch64                                         
  which-2.21-35.fc37.aarch64                                                    
  xxhash-libs-0.8.1-3.fc37.aarch64                                              
  xz-5.2.5-10.fc37.aarch64                                                      
  xz-libs-5.2.5-10.fc37.aarch64                                                 
  zip-3.0-33.fc37.aarch64                                                       
  zlib-1.2.12-4.fc37.aarch64                                                    
  zstd-1.5.2-3.fc37.aarch64                                                     

Complete!
Finish: dnf install
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: ansible-srpm-macros-1-6.fc37.noarch
tzdata-2022a-4.fc37.noarch
libxml2-2.9.14-3.fc37.aarch64
libstdc++-12.1.1-4.fc38.aarch64
nim-srpm-macros-3-7.fc37.noarch
glibc-minimal-langpack-2.36-1.fc37.aarch64
keyutils-libs-1.6.1-5.fc37.aarch64
lz4-libs-1.9.3-5.fc37.aarch64
jansson-2.13.1-5.fc37.aarch64
libevent-2.1.12-7.fc37.aarch64
krb5-libs-1.19.2-11.fc37.1.aarch64
pkgconf-1.8.0-3.fc37.aarch64
libfdisk-2.38.1-1.fc37.aarch64
diffutils-3.8-3.fc37.aarch64
patch-2.7.6-17.fc37.aarch64
fedora-repos-38-0.2.noarch
ncurses-libs-6.3-3.20220501.fc37.aarch64
libdb-5.3.28-53.fc37.aarch64
libuuid-2.38.1-1.fc37.aarch64
libzstd-1.5.2-3.fc37.aarch64
readline-8.1-7.fc37.aarch64
libunistring-1.0-2.fc37.aarch64
shadow-utils-4.11.1-4.fc37.aarch64
libeconf-0.4.0-4.fc37.aarch64
libgomp-12.1.1-4.fc38.aarch64
which-2.21-35.fc37.aarch64
publicsuffix-list-dafsa-20210518-5.fc37.noarch
libattr-2.5.1-5.fc37.aarch64
fedora-gpg-keys-38-0.2.noarch
debugedit-5.0-5.fc37.aarch64
unzip-6.0-58.fc37.aarch64
libxcrypt-4.4.28-3.fc38.aarch64
zlib-1.2.12-4.fc37.aarch64
libblkid-2.38.1-1.fc37.aarch64
ca-certificates-2022.2.54-5.fc37.noarch
zstd-1.5.2-3.fc37.aarch64
libsmartcols-2.38.1-1.fc37.aarch64
tar-1.34-3.fc36.aarch64
grep-3.7-4.fc37.aarch64
mpfr-4.1.0-10.fc37.aarch64
cpio-2.13-13.fc37.aarch64
elfutils-libs-0.187-6.fc37.aarch64
bzip2-1.0.8-12.fc37.aarch64
coreutils-common-9.1-6.fc37.aarch64
curl-7.84.0-2.fc37.aarch64
gzip-1.12-2.fc37.aarch64
libverto-0.3.2-4.fc37.aarch64
qt5-srpm-macros-5.15.5-2.fc37.noarch
glibc-gconv-extra-2.36-1.fc37.aarch64
rpm-build-4.18.0-0.beta1.4.fc37.aarch64
libpkgconf-1.8.0-3.fc37.aarch64
fedora-release-common-38-0.2.noarch
glibc-2.36-1.fc37.aarch64
libcap-ng-0.8.3-3.fc37.aarch64
rpm-4.18.0-0.beta1.4.fc37.aarch64
bash-5.1.16-3.fc37.aarch64
kernel-srpm-macros-1.0-15.fc37.noarch
popt-1.19~rc1-3.fc37.aarch64
libtasn1-4.18.0-3.fc37.aarch64
libpsl-0.21.1-6.fc37.aarch64
xz-5.2.5-10.fc37.aarch64
binutils-gold-2.38-24.fc38.aarch64
openblas-srpm-macros-2-12.fc37.noarch
cracklib-2.9.6-28.fc36.aarch64
file-libs-5.42-4.fc37.aarch64
libssh-0.9.6-5.fc37.aarch64
glibc-common-2.36-1.fc37.aarch64
libmount-2.38.1-1.fc37.aarch64
gmp-6.2.1-3.fc37.aarch64
authselect-libs-1.4.0-3.fc37.aarch64
pkgconf-m4-1.8.0-3.fc37.noarch
libgcc-12.1.1-4.fc38.aarch64
xxhash-libs-0.8.1-3.fc37.aarch64
rpm-build-libs-4.18.0-0.beta1.4.fc37.aarch64
findutils-4.9.0-2.fc37.aarch64
libsemanage-3.4-5.fc37.aarch64
zip-3.0-33.fc37.aarch64
filesystem-3.18-2.fc37.aarch64
libacl-2.3.1-4.fc37.aarch64
elfutils-libelf-0.187-6.fc37.aarch64
binutils-2.38-24.fc38.aarch64
fedora-repos-rawhide-38-0.2.noarch
go-srpm-macros-3.1.0-4.fc37.noarch
file-5.42-4.fc37.aarch64
ocaml-srpm-macros-7-2.fc37.noarch
dwz-0.14-7.fc37.aarch64
elfutils-debuginfod-client-0.187-6.fc37.aarch64
pcre2-10.40-1.fc37.1.aarch64
libssh-config-0.9.6-5.fc37.noarch
ncurses-base-6.3-3.20220501.fc37.noarch
fpc-srpm-macros-1.3-6.fc37.noarch
libidn2-2.3.3-2.fc37.aarch64
authselect-1.4.0-3.fc37.aarch64
libnghttp2-1.48.0-2.fc37.aarch64
gawk-5.1.1-4.fc37.aarch64
python-srpm-macros-3.11-4.fc37.noarch
libbrotli-1.0.9-9.fc37.aarch64
bzip2-libs-1.0.8-12.fc37.aarch64
pkgconf-pkg-config-1.8.0-3.fc37.aarch64
p11-kit-0.24.1-3.fc37.aarch64
gdb-minimal-12.1-4.fc37.aarch64
libsepol-3.4-3.fc37.aarch64
elfutils-default-yama-scope-0.187-6.fc37.noarch
libpwquality-1.4.4-11.fc37.aarch64
perl-srpm-macros-1-46.fc37.noarch
crypto-policies-20220802-1.gita99dfd2.fc37.noarch
lua-srpm-macros-1-7.fc37.noarch
gnat-srpm-macros-4-16.fc37.noarch
libtirpc-1.3.3-0.fc37.aarch64
gdbm-libs-1.23-2.fc37.aarch64
libutempter-1.2.1-7.fc37.aarch64
pam-libs-1.5.2-14.fc37.aarch64
alternatives-1.19-3.fc37.aarch64
pcre2-syntax-10.40-1.fc37.1.noarch
libcap-2.48-5.fc37.aarch64
sqlite-libs-3.39.2-2.fc37.aarch64
efi-srpm-macros-5-6.fc37.noarch
util-linux-2.38.1-1.fc37.aarch64
gpg-pubkey-5323552a-6112bcdc
rust-srpm-macros-22-1.fc37.noarch
systemd-libs-251.4-51.fc37.aarch64
libsigsegv-2.14-3.fc37.aarch64
ghc-srpm-macros-1.5.0-7.fc37.noarch
gpg-pubkey-eb10b464-6202d9c6
openssl-libs-3.0.5-2.fc37.aarch64
pcre-8.45-1.fc37.2.aarch64
libffi-3.4.2-9.fc37.aarch64
lua-libs-5.4.4-4.fc37.aarch64
p11-kit-trust-0.24.1-3.fc37.aarch64
package-notes-srpm-macros-0.4-16.fc37.noarch
libcom_err-1.46.5-3.fc37.aarch64
libarchive-3.6.1-2.fc37.aarch64
xz-libs-5.2.5-10.fc37.aarch64
cyrus-sasl-lib-2.1.28-7.fc37.aarch64
coreutils-9.1-6.fc37.aarch64
openldap-2.6.2-5.fc38.aarch64
info-6.8-4.fc37.aarch64
libselinux-3.4-5.fc37.aarch64
ed-1.18-2.fc37.aarch64
util-linux-core-2.38.1-1.fc37.aarch64
rpm-libs-4.18.0-0.beta1.4.fc37.aarch64
sed-4.8-11.fc37.aarch64
pam-1.5.2-14.fc37.aarch64
rpmautospec-rpm-macros-0.3.0-1.fc37.noarch
libcurl-7.84.0-2.fc37.aarch64
fedora-release-38-0.2.noarch
fedora-release-identity-basic-38-0.2.noarch
redhat-rpm-config-227-1.fc37.noarch
elfutils-0.187-6.fc37.aarch64
fonts-srpm-macros-2.0.5-8.fc37.noarch
basesystem-11-14.fc37.noarch
setup-2.14.1-2.fc37.noarch
audit-libs-3.0.8-3.fc37.aarch64
libnsl2-2.0.0-4.fc37.aarch64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1598486400
Wrote: /builddir/build/SRPMS/mmseq-1.0.11-5.fc38.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-6y0afkng/mmseq/mmseq.spec) Config(child) 1 minutes 11 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/mmseq-1.0.11-5.fc38.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1660558476.360431 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 3.1 starting (python version = 3.10.4, NVR = mock-3.1-1.fc35)...
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/results/mmseq-1.0.11-5.fc38.src.rpm)  Config(fedora-rawhide-aarch64)
Start: clean chroot
Finish: clean chroot
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.1
INFO: Mock Version: 3.1
Start: dnf update
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity

This system is not registered with an entitlement server. You can use subscription-manager to register.

Copr repository                                  92 kB/s | 3.3 kB     00:00    
fedora                                          307 kB/s |  12 kB     00:00    
Dependencies resolved.
Nothing to do.
Complete!
Finish: dnf update
Finish: chroot init
Start: build phase for mmseq-1.0.11-5.fc38.src.rpm
Start: build setup for mmseq-1.0.11-5.fc38.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1598486400
Wrote: /builddir/build/SRPMS/mmseq-1.0.11-5.fc38.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity

This system is not registered with an entitlement server. You can use subscription-manager to register.

Copr repository                                 113 kB/s | 3.3 kB     00:00    
fedora                                          343 kB/s |  12 kB     00:00    
Dependencies resolved.
================================================================================
 Package                      Arch     Version                 Repository  Size
================================================================================
Installing:
 armadillo-devel              aarch64  10.8.2-2.fc37           fedora     2.2 M
 boost-devel                  aarch64  1.78.0-9.fc37           fedora      13 M
 flexiblas-devel              aarch64  3.2.1-2.fc37            fedora     116 k
 gcc-c++                      aarch64  12.1.1-4.fc38           fedora      11 M
 gsl-devel                    aarch64  2.6-7.fc37              fedora     634 k
 htslib-devel                 aarch64  1.15.1-1.fc38           copr_base  100 k
 perl-generators              noarch   1.13-8.fc37             fedora      16 k
 zlib-devel                   aarch64  1.2.12-4.fc37           fedora      44 k
Installing dependencies:
 SuperLU                      aarch64  5.3.0-3.fc37            fedora     170 k
 SuperLU-devel                aarch64  5.3.0-3.fc37            fedora      27 k
 annobin-docs                 noarch   10.81-1.fc38            fedora      91 k
 annobin-plugin-gcc           aarch64  10.81-1.fc38            fedora     882 k
 armadillo                    aarch64  10.8.2-2.fc37           fedora      34 k
 arpack                       aarch64  3.8.0-5.fc37            fedora     178 k
 arpack-devel                 aarch64  3.8.0-5.fc37            fedora      14 k
 autoconf                     noarch   2.71-3.fc37             fedora     733 k
 automake                     noarch   1.16.5-9.fc37           fedora     696 k
 boost                        aarch64  1.78.0-9.fc37           fedora      14 k
 boost-atomic                 aarch64  1.78.0-9.fc37           fedora      20 k
 boost-chrono                 aarch64  1.78.0-9.fc37           fedora      27 k
 boost-container              aarch64  1.78.0-9.fc37           fedora      40 k
 boost-context                aarch64  1.78.0-9.fc37           fedora      17 k
 boost-contract               aarch64  1.78.0-9.fc37           fedora      44 k
 boost-coroutine              aarch64  1.78.0-9.fc37           fedora      23 k
 boost-date-time              aarch64  1.78.0-9.fc37           fedora      16 k
 boost-fiber                  aarch64  1.78.0-9.fc37           fedora      41 k
 boost-filesystem             aarch64  1.78.0-9.fc37           fedora      62 k
 boost-graph                  aarch64  1.78.0-9.fc37           fedora     141 k
 boost-iostreams              aarch64  1.78.0-9.fc37           fedora      40 k
 boost-json                   aarch64  1.78.0-9.fc37           fedora     106 k
 boost-locale                 aarch64  1.78.0-9.fc37           fedora     202 k
 boost-log                    aarch64  1.78.0-9.fc37           fedora     446 k
 boost-math                   aarch64  1.78.0-9.fc37           fedora     244 k
 boost-nowide                 aarch64  1.78.0-9.fc37           fedora      21 k
 boost-numpy3                 aarch64  1.78.0-9.fc37           fedora      28 k
 boost-program-options        aarch64  1.78.0-9.fc37           fedora     102 k
 boost-python3                aarch64  1.78.0-9.fc37           fedora      89 k
 boost-random                 aarch64  1.78.0-9.fc37           fedora      26 k
 boost-regex                  aarch64  1.78.0-9.fc37           fedora     107 k
 boost-serialization          aarch64  1.78.0-9.fc37           fedora     125 k
 boost-stacktrace             aarch64  1.78.0-9.fc37           fedora      30 k
 boost-system                 aarch64  1.78.0-9.fc37           fedora      16 k
 boost-test                   aarch64  1.78.0-9.fc37           fedora     221 k
 boost-thread                 aarch64  1.78.0-9.fc37           fedora      57 k
 boost-timer                  aarch64  1.78.0-9.fc37           fedora      26 k
 boost-type_erasure           aarch64  1.78.0-9.fc37           fedora      33 k
 boost-wave                   aarch64  1.78.0-9.fc37           fedora     202 k
 cmake-filesystem             aarch64  3.24.0-1.fc38           fedora      16 k
 cpp                          aarch64  12.1.1-4.fc38           fedora     9.2 M
 emacs-filesystem             noarch   1:28.1-3.fc37           fedora     9.5 k
 expat                        aarch64  2.4.8-2.fc37            fedora     105 k
 flexiblas                    aarch64  3.2.1-2.fc37            fedora      33 k
 flexiblas-netlib             aarch64  3.2.1-2.fc37            fedora     2.5 M
 flexiblas-netlib64           aarch64  3.2.1-2.fc37            fedora     2.5 M
 flexiblas-openblas-openmp    aarch64  3.2.1-2.fc37            fedora      16 k
 flexiblas-openblas-openmp64  aarch64  3.2.1-2.fc37            fedora      16 k
 gc                           aarch64  8.0.6-4.fc37            fedora     102 k
 gcc                          aarch64  12.1.1-4.fc38           fedora      29 M
 gcc-gfortran                 aarch64  12.1.1-4.fc38           fedora      11 M
 gcc-plugin-annobin           aarch64  12.1.1-4.fc38           fedora      50 k
 glibc-devel                  aarch64  2.36-1.fc37             fedora     583 k
 groff-base                   aarch64  1.22.4-10.fc37          fedora     1.0 M
 gsl                          aarch64  2.6-7.fc37              fedora     1.0 M
 guile22                      aarch64  2.2.7-6.fc37            fedora     6.5 M
 hdf5                         aarch64  1.12.1-10.fc37          fedora     2.1 M
 hdf5-devel                   aarch64  1.12.1-10.fc37          fedora     1.3 M
 htslib                       aarch64  1.15.1-1.fc38           copr_base  478 k
 kernel-headers               aarch64  5.19.0-1.fc37           fedora     1.5 M
 libaec                       aarch64  1.0.6-3.fc37            fedora      41 k
 libaec-devel                 aarch64  1.0.6-3.fc37            fedora      12 k
 libasan                      aarch64  12.1.1-4.fc38           fedora     421 k
 libatomic                    aarch64  12.1.1-4.fc38           fedora      41 k
 libb2                        aarch64  0.98.1-7.fc37           fedora      24 k
 libgfortran                  aarch64  12.1.1-4.fc38           fedora     433 k
 libicu                       aarch64  71.1-1.fc37             fedora      10 M
 libicu-devel                 aarch64  71.1-1.fc37             fedora     917 k
 libmpc                       aarch64  1.2.1-5.fc37            fedora      62 k
 libstdc++-devel              aarch64  12.1.1-4.fc38           fedora     2.5 M
 libtool-ltdl                 aarch64  2.4.7-2.fc37            fedora      37 k
 libubsan                     aarch64  12.1.1-4.fc38           fedora     190 k
 libxcrypt-devel              aarch64  4.4.28-3.fc38           fedora      28 k
 m4                           aarch64  1.4.19-4.fc37           fedora     299 k
 make                         aarch64  1:4.3-11.fc37           fedora     537 k
 mpdecimal                    aarch64  2.5.1-4.fc37            fedora     102 k
 ncurses                      aarch64  6.3-3.20220501.fc37     fedora     409 k
 openblas                     aarch64  0.3.20-2.fc37           fedora      34 k
 openblas-openmp              aarch64  0.3.20-2.fc37           fedora     3.7 M
 openblas-openmp64            aarch64  0.3.20-2.fc37           fedora     3.6 M
 perl-B                       aarch64  1.83-491.fc37           fedora     187 k
 perl-Carp                    noarch   1.52-489.fc37           fedora      29 k
 perl-Class-Struct            noarch   0.66-491.fc37           fedora      26 k
 perl-Data-Dumper             aarch64  2.184-490.fc37          fedora      55 k
 perl-DynaLoader              aarch64  1.52-491.fc37           fedora      30 k
 perl-Encode                  aarch64  4:3.19-491.fc37         fedora     1.7 M
 perl-Errno                   aarch64  1.36-491.fc37           fedora      19 k
 perl-Exporter                noarch   5.77-489.fc37           fedora      31 k
 perl-Fcntl                   aarch64  1.15-491.fc37           fedora      25 k
 perl-Fedora-VSP              noarch   0.001-29.fc37           fedora      23 k
 perl-File-Basename           noarch   2.85-491.fc37           fedora      22 k
 perl-File-Compare            noarch   1.100.700-491.fc37      fedora      18 k
 perl-File-Copy               noarch   2.39-491.fc37           fedora      24 k
 perl-File-Find               noarch   1.40-491.fc37           fedora      30 k
 perl-File-Path               noarch   2.18-489.fc37           fedora      35 k
 perl-File-Temp               noarch   1:0.231.100-489.fc37    fedora      59 k
 perl-File-stat               noarch   1.12-491.fc37           fedora      22 k
 perl-Getopt-Long             noarch   1:2.52-489.fc37         fedora      60 k
 perl-Getopt-Std              noarch   1.13-491.fc37           fedora      20 k
 perl-HTTP-Tiny               noarch   0.082-1.fc37            fedora      55 k
 perl-IO                      aarch64  1.50-491.fc37           fedora      96 k
 perl-IPC-Open3               noarch   1.22-491.fc37           fedora      27 k
 perl-MIME-Base64             aarch64  3.16-489.fc37           fedora      30 k
 perl-POSIX                   aarch64  2.03-491.fc37           fedora     102 k
 perl-PathTools               aarch64  3.84-489.fc37           fedora      90 k
 perl-Pod-Escapes             noarch   1:1.07-489.fc37         fedora      20 k
 perl-Pod-Perldoc             noarch   3.28.01-490.fc37        fedora      90 k
 perl-Pod-Simple              noarch   1:3.43-490.fc37         fedora     225 k
 perl-Pod-Usage               noarch   4:2.03-3.fc37           fedora      40 k
 perl-Scalar-List-Utils       aarch64  5:1.63-489.fc38         fedora      71 k
 perl-SelectSaver             noarch   1.02-491.fc37           fedora      16 k
 perl-Socket                  aarch64  4:2.035-2.fc37          fedora      55 k
 perl-Storable                aarch64  1:3.26-489.fc37         fedora      95 k
 perl-Symbol                  noarch   1.09-491.fc37           fedora      19 k
 perl-Term-ANSIColor          noarch   5.01-490.fc37           fedora      48 k
 perl-Term-Cap                noarch   1.17-489.fc37           fedora      22 k
 perl-Text-ParseWords         noarch   3.31-489.fc37           fedora      16 k
 perl-Text-Tabs+Wrap          noarch   2021.0814-489.fc37      fedora      22 k
 perl-Thread-Queue            noarch   3.14-489.fc37           fedora      21 k
 perl-Time-Local              noarch   2:1.300-489.fc37        fedora      33 k
 perl-constant                noarch   1.33-490.fc37           fedora      23 k
 perl-if                      noarch   0.61.000-491.fc37       fedora      18 k
 perl-interpreter             aarch64  4:5.36.0-491.fc37       fedora      76 k
 perl-libs                    aarch64  4:5.36.0-491.fc37       fedora     2.2 M
 perl-macros                  noarch   4:5.36.0-491.fc37       fedora      16 k
 perl-mro                     aarch64  1.26-491.fc37           fedora      33 k
 perl-overload                noarch   1.35-491.fc37           fedora      50 k
 perl-overloading             noarch   0.02-491.fc37           fedora      17 k
 perl-parent                  noarch   1:0.238-489.fc37        fedora      14 k
 perl-podlators               noarch   1:4.14-489.fc37         fedora     116 k
 perl-subs                    noarch   1.04-491.fc37           fedora      16 k
 perl-threads                 aarch64  1:2.27-489.fc37         fedora      56 k
 perl-threads-shared          aarch64  1.64-489.fc37           fedora      43 k
 perl-vars                    noarch   1.05-491.fc37           fedora      17 k
 python-pip-wheel             noarch   22.2-1.fc37             fedora     1.4 M
 python-setuptools-wheel      noarch   62.6.0-2.fc37           fedora     712 k
 python3                      aarch64  3.11.0~rc1-1.fc38       fedora      27 k
 python3-libs                 aarch64  3.11.0~rc1-1.fc38       fedora     9.5 M
 python3-numpy                aarch64  1:1.22.0-7.fc37         fedora     6.9 M

Transaction Summary
================================================================================
Install  147 Packages

Total download size: 149 M
Installed size: 637 M
Downloading Packages:
(1/147): htslib-1.15.1-1.fc38.aarch64.rpm       9.6 MB/s | 478 kB     00:00    
(2/147): htslib-devel-1.15.1-1.fc38.aarch64.rpm 1.9 MB/s | 100 kB     00:00    
(3/147): annobin-docs-10.81-1.fc38.noarch.rpm    18 MB/s |  91 kB     00:00    
(4/147): annobin-plugin-gcc-10.81-1.fc38.aarch6  80 MB/s | 882 kB     00:00    
(5/147): SuperLU-devel-5.3.0-3.fc37.aarch64.rpm 983 kB/s |  27 kB     00:00    
(6/147): armadillo-10.8.2-2.fc37.aarch64.rpm    1.7 MB/s |  34 kB     00:00    
(7/147): SuperLU-5.3.0-3.fc37.aarch64.rpm       1.6 MB/s | 170 kB     00:00    
(8/147): arpack-3.8.0-5.fc37.aarch64.rpm        7.5 MB/s | 178 kB     00:00    
(9/147): arpack-devel-3.8.0-5.fc37.aarch64.rpm  851 kB/s |  14 kB     00:00    
(10/147): autoconf-2.71-3.fc37.noarch.rpm        25 MB/s | 733 kB     00:00    
(11/147): automake-1.16.5-9.fc37.noarch.rpm      24 MB/s | 696 kB     00:00    
(12/147): armadillo-devel-10.8.2-2.fc37.aarch64  27 MB/s | 2.2 MB     00:00    
(13/147): boost-1.78.0-9.fc37.aarch64.rpm       819 kB/s |  14 kB     00:00    
(14/147): boost-atomic-1.78.0-9.fc37.aarch64.rp 1.3 MB/s |  20 kB     00:00    
(15/147): boost-chrono-1.78.0-9.fc37.aarch64.rp 2.1 MB/s |  27 kB     00:00    
(16/147): boost-container-1.78.0-9.fc37.aarch64 1.9 MB/s |  40 kB     00:00    
(17/147): boost-context-1.78.0-9.fc37.aarch64.r 1.1 MB/s |  17 kB     00:00    
(18/147): boost-coroutine-1.78.0-9.fc37.aarch64 2.3 MB/s |  23 kB     00:00    
(19/147): boost-date-time-1.78.0-9.fc37.aarch64 854 kB/s |  16 kB     00:00    
(20/147): boost-contract-1.78.0-9.fc37.aarch64. 1.1 MB/s |  44 kB     00:00    
(21/147): boost-filesystem-1.78.0-9.fc37.aarch6 4.4 MB/s |  62 kB     00:00    
(22/147): boost-fiber-1.78.0-9.fc37.aarch64.rpm 1.6 MB/s |  41 kB     00:00    
(23/147): boost-graph-1.78.0-9.fc37.aarch64.rpm 7.2 MB/s | 141 kB     00:00    
(24/147): boost-iostreams-1.78.0-9.fc37.aarch64 2.2 MB/s |  40 kB     00:00    
(25/147): boost-json-1.78.0-9.fc37.aarch64.rpm  6.0 MB/s | 106 kB     00:00    
(26/147): boost-locale-1.78.0-9.fc37.aarch64.rp 4.7 MB/s | 202 kB     00:00    
(27/147): boost-log-1.78.0-9.fc37.aarch64.rpm    10 MB/s | 446 kB     00:00    
(28/147): boost-math-1.78.0-9.fc37.aarch64.rpm  6.9 MB/s | 244 kB     00:00    
(29/147): boost-nowide-1.78.0-9.fc37.aarch64.rp 967 kB/s |  21 kB     00:00    
(30/147): boost-numpy3-1.78.0-9.fc37.aarch64.rp 1.7 MB/s |  28 kB     00:00    
(31/147): boost-program-options-1.78.0-9.fc37.a 4.7 MB/s | 102 kB     00:00    
(32/147): boost-python3-1.78.0-9.fc37.aarch64.r 5.8 MB/s |  89 kB     00:00    
(33/147): boost-random-1.78.0-9.fc37.aarch64.rp 1.6 MB/s |  26 kB     00:00    
(34/147): boost-regex-1.78.0-9.fc37.aarch64.rpm  12 MB/s | 107 kB     00:00    
(35/147): boost-serialization-1.78.0-9.fc37.aar 5.5 MB/s | 125 kB     00:00    
(36/147): boost-stacktrace-1.78.0-9.fc37.aarch6 1.7 MB/s |  30 kB     00:00    
(37/147): boost-devel-1.78.0-9.fc37.aarch64.rpm  55 MB/s |  13 MB     00:00    
(38/147): boost-system-1.78.0-9.fc37.aarch64.rp 402 kB/s |  16 kB     00:00    
(39/147): boost-test-1.78.0-9.fc37.aarch64.rpm  5.7 MB/s | 221 kB     00:00    
(40/147): boost-thread-1.78.0-9.fc37.aarch64.rp 5.0 MB/s |  57 kB     00:00    
(41/147): boost-timer-1.78.0-9.fc37.aarch64.rpm 2.2 MB/s |  26 kB     00:00    
(42/147): boost-type_erasure-1.78.0-9.fc37.aarc 2.6 MB/s |  33 kB     00:00    
(43/147): cmake-filesystem-3.24.0-1.fc38.aarch6 5.6 MB/s |  16 kB     00:00    
(44/147): emacs-filesystem-28.1-3.fc37.noarch.r 1.8 MB/s | 9.5 kB     00:00    
(45/147): expat-2.4.8-2.fc37.aarch64.rpm        7.5 MB/s | 105 kB     00:00    
(46/147): boost-wave-1.78.0-9.fc37.aarch64.rpm  4.7 MB/s | 202 kB     00:00    
(47/147): cpp-12.1.1-4.fc38.aarch64.rpm         132 MB/s | 9.2 MB     00:00    
(48/147): flexiblas-3.2.1-2.fc37.aarch64.rpm    771 kB/s |  33 kB     00:00    
(49/147): flexiblas-devel-3.2.1-2.fc37.aarch64. 4.3 MB/s | 116 kB     00:00    
(50/147): flexiblas-openblas-openmp-3.2.1-2.fc3 1.4 MB/s |  16 kB     00:00    
(51/147): flexiblas-openblas-openmp64-3.2.1-2.f 1.2 MB/s |  16 kB     00:00    
(52/147): gc-8.0.6-4.fc37.aarch64.rpm            25 MB/s | 102 kB     00:00    
(53/147): flexiblas-netlib-3.2.1-2.fc37.aarch64  50 MB/s | 2.5 MB     00:00    
(54/147): flexiblas-netlib64-3.2.1-2.fc37.aarch  27 MB/s | 2.5 MB     00:00    
(55/147): gcc-c++-12.1.1-4.fc38.aarch64.rpm     100 MB/s |  11 MB     00:00    
(56/147): gcc-plugin-annobin-12.1.1-4.fc38.aarc 1.4 MB/s |  50 kB     00:00    
(57/147): glibc-devel-2.36-1.fc37.aarch64.rpm    11 MB/s | 583 kB     00:00    
(58/147): gcc-gfortran-12.1.1-4.fc38.aarch64.rp  49 MB/s |  11 MB     00:00    
(59/147): groff-base-1.22.4-10.fc37.aarch64.rpm  13 MB/s | 1.0 MB     00:00    
(60/147): gsl-2.6-7.fc37.aarch64.rpm            8.2 MB/s | 1.0 MB     00:00    
(61/147): gsl-devel-2.6-7.fc37.aarch64.rpm      5.7 MB/s | 634 kB     00:00    
(62/147): gcc-12.1.1-4.fc38.aarch64.rpm          56 MB/s |  29 MB     00:00    
(63/147): guile22-2.2.7-6.fc37.aarch64.rpm       45 MB/s | 6.5 MB     00:00    
(64/147): hdf5-1.12.1-10.fc37.aarch64.rpm        15 MB/s | 2.1 MB     00:00    
(65/147): kernel-headers-5.19.0-1.fc37.aarch64.  81 MB/s | 1.5 MB     00:00    
(66/147): hdf5-devel-1.12.1-10.fc37.aarch64.rpm  20 MB/s | 1.3 MB     00:00    
(67/147): libaec-1.0.6-3.fc37.aarch64.rpm       2.0 MB/s |  41 kB     00:00    
(68/147): libatomic-12.1.1-4.fc38.aarch64.rpm    15 MB/s |  41 kB     00:00    
(69/147): libaec-devel-1.0.6-3.fc37.aarch64.rpm 1.0 MB/s |  12 kB     00:00    
(70/147): libb2-0.98.1-7.fc37.aarch64.rpm       7.7 MB/s |  24 kB     00:00    
(71/147): libasan-12.1.1-4.fc38.aarch64.rpm      39 MB/s | 421 kB     00:00    
(72/147): libicu-devel-71.1-1.fc37.aarch64.rpm   64 MB/s | 917 kB     00:00    
(73/147): libmpc-1.2.1-5.fc37.aarch64.rpm        15 MB/s |  62 kB     00:00    
(74/147): libgfortran-12.1.1-4.fc38.aarch64.rpm 9.4 MB/s | 433 kB     00:00    
(75/147): libstdc++-devel-12.1.1-4.fc38.aarch64  83 MB/s | 2.5 MB     00:00    
(76/147): libtool-ltdl-2.4.7-2.fc37.aarch64.rpm 3.5 MB/s |  37 kB     00:00    
(77/147): libubsan-12.1.1-4.fc38.aarch64.rpm     28 MB/s | 190 kB     00:00    
(78/147): libxcrypt-devel-4.4.28-3.fc38.aarch64 6.4 MB/s |  28 kB     00:00    
(79/147): m4-1.4.19-4.fc37.aarch64.rpm           58 MB/s | 299 kB     00:00    
(80/147): make-4.3-11.fc37.aarch64.rpm           34 MB/s | 537 kB     00:00    
(81/147): mpdecimal-2.5.1-4.fc37.aarch64.rpm    7.3 MB/s | 102 kB     00:00    
(82/147): ncurses-6.3-3.20220501.fc37.aarch64.r  47 MB/s | 409 kB     00:00    
(83/147): openblas-0.3.20-2.fc37.aarch64.rpm    1.2 MB/s |  34 kB     00:00    
(84/147): libicu-71.1-1.fc37.aarch64.rpm         61 MB/s |  10 MB     00:00    
(85/147): perl-B-1.83-491.fc37.aarch64.rpm       23 MB/s | 187 kB     00:00    
(86/147): perl-Carp-1.52-489.fc37.noarch.rpm    3.7 MB/s |  29 kB     00:00    
(87/147): perl-Class-Struct-0.66-491.fc37.noarc 6.5 MB/s |  26 kB     00:00    
(88/147): perl-Data-Dumper-2.184-490.fc37.aarch  15 MB/s |  55 kB     00:00    
(89/147): perl-DynaLoader-1.52-491.fc37.aarch64  11 MB/s |  30 kB     00:00    
(90/147): perl-Encode-3.19-491.fc37.aarch64.rpm  91 MB/s | 1.7 MB     00:00    
(91/147): openblas-openmp-0.3.20-2.fc37.aarch64  28 MB/s | 3.7 MB     00:00    
(92/147): perl-Errno-1.36-491.fc37.aarch64.rpm  1.6 MB/s |  19 kB     00:00    
(93/147): perl-Exporter-5.77-489.fc37.noarch.rp 9.5 MB/s |  31 kB     00:00    
(94/147): perl-Fcntl-1.15-491.fc37.aarch64.rpm  6.8 MB/s |  25 kB     00:00    
(95/147): perl-File-Basename-2.85-491.fc37.noar 8.5 MB/s |  22 kB     00:00    
(96/147): perl-Fedora-VSP-0.001-29.fc37.noarch. 4.0 MB/s |  23 kB     00:00    
(97/147): perl-File-Compare-1.100.700-491.fc37. 6.0 MB/s |  18 kB     00:00    
(98/147): perl-File-Copy-2.39-491.fc37.noarch.r 8.0 MB/s |  24 kB     00:00    
(99/147): perl-File-Find-1.40-491.fc37.noarch.r  12 MB/s |  30 kB     00:00    
(100/147): perl-File-Path-2.18-489.fc37.noarch.  11 MB/s |  35 kB     00:00    
(101/147): perl-File-Temp-0.231.100-489.fc37.no  17 MB/s |  59 kB     00:00    
(102/147): perl-File-stat-1.12-491.fc37.noarch. 6.3 MB/s |  22 kB     00:00    
(103/147): perl-Getopt-Long-2.52-489.fc37.noarc  17 MB/s |  60 kB     00:00    
(104/147): perl-Getopt-Std-1.13-491.fc37.noarch 5.5 MB/s |  20 kB     00:00    
(105/147): perl-HTTP-Tiny-0.082-1.fc37.noarch.r  19 MB/s |  55 kB     00:00    
(106/147): perl-IO-1.50-491.fc37.aarch64.rpm     25 MB/s |  96 kB     00:00    
(107/147): perl-IPC-Open3-1.22-491.fc37.noarch. 5.5 MB/s |  27 kB     00:00    
(108/147): perl-MIME-Base64-3.16-489.fc37.aarch 9.6 MB/s |  30 kB     00:00    
(109/147): perl-PathTools-3.84-489.fc37.aarch64  22 MB/s |  90 kB     00:00    
(110/147): perl-POSIX-2.03-491.fc37.aarch64.rpm  18 MB/s | 102 kB     00:00    
(111/147): perl-Pod-Escapes-1.07-489.fc37.noarc 6.9 MB/s |  20 kB     00:00    
(112/147): perl-Pod-Perldoc-3.28.01-490.fc37.no  27 MB/s |  90 kB     00:00    
(113/147): perl-Pod-Simple-3.43-490.fc37.noarch  53 MB/s | 225 kB     00:00    
(114/147): perl-Pod-Usage-2.03-3.fc37.noarch.rp 8.2 MB/s |  40 kB     00:00    
(115/147): perl-Scalar-List-Utils-1.63-489.fc38  20 MB/s |  71 kB     00:00    
(116/147): perl-SelectSaver-1.02-491.fc37.noarc 4.9 MB/s |  16 kB     00:00    
(117/147): perl-Socket-2.035-2.fc37.aarch64.rpm  12 MB/s |  55 kB     00:00    
(118/147): perl-Storable-3.26-489.fc37.aarch64.  18 MB/s |  95 kB     00:00    
(119/147): perl-Symbol-1.09-491.fc37.noarch.rpm 7.1 MB/s |  19 kB     00:00    
(120/147): perl-Term-ANSIColor-5.01-490.fc37.no  16 MB/s |  48 kB     00:00    
(121/147): perl-Term-Cap-1.17-489.fc37.noarch.r 8.1 MB/s |  22 kB     00:00    
(122/147): perl-Text-ParseWords-3.31-489.fc37.n 6.5 MB/s |  16 kB     00:00    
(123/147): perl-Text-Tabs+Wrap-2021.0814-489.fc 7.9 MB/s |  22 kB     00:00    
(124/147): perl-Thread-Queue-3.14-489.fc37.noar 6.8 MB/s |  21 kB     00:00    
(125/147): perl-Time-Local-1.300-489.fc37.noarc  11 MB/s |  33 kB     00:00    
(126/147): perl-constant-1.33-490.fc37.noarch.r 8.1 MB/s |  23 kB     00:00    
(127/147): perl-if-0.61.000-491.fc37.noarch.rpm 6.9 MB/s |  18 kB     00:00    
(128/147): perl-generators-1.13-8.fc37.noarch.r 2.7 MB/s |  16 kB     00:00    
(129/147): perl-interpreter-5.36.0-491.fc37.aar  25 MB/s |  76 kB     00:00    
(130/147): perl-macros-5.36.0-491.fc37.noarch.r 1.9 MB/s |  16 kB     00:00    
(131/147): perl-libs-5.36.0-491.fc37.aarch64.rp 115 MB/s | 2.2 MB     00:00    
(132/147): perl-mro-1.26-491.fc37.aarch64.rpm   4.9 MB/s |  33 kB     00:00    
(133/147): perl-overload-1.35-491.fc37.noarch.r  15 MB/s |  50 kB     00:00    
(134/147): perl-overloading-0.02-491.fc37.noarc 5.7 MB/s |  17 kB     00:00    
(135/147): perl-parent-0.238-489.fc37.noarch.rp 4.4 MB/s |  14 kB     00:00    
(136/147): perl-subs-1.04-491.fc37.noarch.rpm   4.6 MB/s |  16 kB     00:00    
(137/147): perl-podlators-4.14-489.fc37.noarch.  13 MB/s | 116 kB     00:00    
(138/147): perl-threads-2.27-489.fc37.aarch64.r  13 MB/s |  56 kB     00:00    
(139/147): perl-threads-shared-1.64-489.fc37.aa  14 MB/s |  43 kB     00:00    
(140/147): perl-vars-1.05-491.fc37.noarch.rpm   6.3 MB/s |  17 kB     00:00    
(141/147): python-pip-wheel-22.2-1.fc37.noarch.  89 MB/s | 1.4 MB     00:00    
(142/147): python3-3.11.0~rc1-1.fc38.aarch64.rp 5.7 MB/s |  27 kB     00:00    
(143/147): python-setuptools-wheel-62.6.0-2.fc3  30 MB/s | 712 kB     00:00    
(144/147): python3-numpy-1.22.0-7.fc37.aarch64.  47 MB/s | 6.9 MB     00:00    
(145/147): zlib-devel-1.2.12-4.fc37.aarch64.rpm 6.1 MB/s |  44 kB     00:00    
(146/147): openblas-openmp64-0.3.20-2.fc37.aarc 7.6 MB/s | 3.6 MB     00:00    
(147/147): python3-libs-3.11.0~rc1-1.fc38.aarch  38 MB/s | 9.5 MB     00:00    
--------------------------------------------------------------------------------
Total                                            79 MB/s | 149 MB     00:01     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : boost-system-1.78.0-9.fc37.aarch64                   1/147 
  Installing       : libgfortran-12.1.1-4.fc38.aarch64                    2/147 
  Installing       : boost-chrono-1.78.0-9.fc37.aarch64                   3/147 
  Installing       : boost-thread-1.78.0-9.fc37.aarch64                   4/147 
  Installing       : libicu-71.1-1.fc37.aarch64                           5/147 
  Installing       : flexiblas-3.2.1-2.fc37.aarch64                       6/147 
  Installing       : libmpc-1.2.1-5.fc37.aarch64                          7/147 
  Installing       : boost-regex-1.78.0-9.fc37.aarch64                    8/147 
  Installing       : boost-context-1.78.0-9.fc37.aarch64                  9/147 
  Installing       : boost-atomic-1.78.0-9.fc37.aarch64                  10/147 
  Installing       : boost-filesystem-1.78.0-9.fc37.aarch64              11/147 
  Installing       : openblas-0.3.20-2.fc37.aarch64                      12/147 
  Installing       : libstdc++-devel-12.1.1-4.fc38.aarch64               13/147 
  Installing       : libaec-1.0.6-3.fc37.aarch64                         14/147 
  Installing       : hdf5-1.12.1-10.fc37.aarch64                         15/147 
  Installing       : boost-date-time-1.78.0-9.fc37.aarch64               16/147 
  Installing       : boost-container-1.78.0-9.fc37.aarch64               17/147 
  Installing       : boost-json-1.78.0-9.fc37.aarch64                    18/147 
  Installing       : boost-wave-1.78.0-9.fc37.aarch64                    19/147 
  Installing       : libaec-devel-1.0.6-3.fc37.aarch64                   20/147 
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  Verifying        : perl-vars-1.05-491.fc37.noarch                     141/147 
  Verifying        : python-pip-wheel-22.2-1.fc37.noarch                142/147 
  Verifying        : python-setuptools-wheel-62.6.0-2.fc37.noarch       143/147 
  Verifying        : python3-3.11.0~rc1-1.fc38.aarch64                  144/147 
  Verifying        : python3-libs-3.11.0~rc1-1.fc38.aarch64             145/147 
  Verifying        : python3-numpy-1:1.22.0-7.fc37.aarch64              146/147 
  Verifying        : zlib-devel-1.2.12-4.fc37.aarch64                   147/147 
Installed products updated.

Installed:
  SuperLU-5.3.0-3.fc37.aarch64                                                  
  SuperLU-devel-5.3.0-3.fc37.aarch64                                            
  annobin-docs-10.81-1.fc38.noarch                                              
  annobin-plugin-gcc-10.81-1.fc38.aarch64                                       
  armadillo-10.8.2-2.fc37.aarch64                                               
  armadillo-devel-10.8.2-2.fc37.aarch64                                         
  arpack-3.8.0-5.fc37.aarch64                                                   
  arpack-devel-3.8.0-5.fc37.aarch64                                             
  autoconf-2.71-3.fc37.noarch                                                   
  automake-1.16.5-9.fc37.noarch                                                 
  boost-1.78.0-9.fc37.aarch64                                                   
  boost-atomic-1.78.0-9.fc37.aarch64                                            
  boost-chrono-1.78.0-9.fc37.aarch64                                            
  boost-container-1.78.0-9.fc37.aarch64                                         
  boost-context-1.78.0-9.fc37.aarch64                                           
  boost-contract-1.78.0-9.fc37.aarch64                                          
  boost-coroutine-1.78.0-9.fc37.aarch64                                         
  boost-date-time-1.78.0-9.fc37.aarch64                                         
  boost-devel-1.78.0-9.fc37.aarch64                                             
  boost-fiber-1.78.0-9.fc37.aarch64                                             
  boost-filesystem-1.78.0-9.fc37.aarch64                                        
  boost-graph-1.78.0-9.fc37.aarch64                                             
  boost-iostreams-1.78.0-9.fc37.aarch64                                         
  boost-json-1.78.0-9.fc37.aarch64                                              
  boost-locale-1.78.0-9.fc37.aarch64                                            
  boost-log-1.78.0-9.fc37.aarch64                                               
  boost-math-1.78.0-9.fc37.aarch64                                              
  boost-nowide-1.78.0-9.fc37.aarch64                                            
  boost-numpy3-1.78.0-9.fc37.aarch64                                            
  boost-program-options-1.78.0-9.fc37.aarch64                                   
  boost-python3-1.78.0-9.fc37.aarch64                                           
  boost-random-1.78.0-9.fc37.aarch64                                            
  boost-regex-1.78.0-9.fc37.aarch64                                             
  boost-serialization-1.78.0-9.fc37.aarch64                                     
  boost-stacktrace-1.78.0-9.fc37.aarch64                                        
  boost-system-1.78.0-9.fc37.aarch64                                            
  boost-test-1.78.0-9.fc37.aarch64                                              
  boost-thread-1.78.0-9.fc37.aarch64                                            
  boost-timer-1.78.0-9.fc37.aarch64                                             
  boost-type_erasure-1.78.0-9.fc37.aarch64                                      
  boost-wave-1.78.0-9.fc37.aarch64                                              
  cmake-filesystem-3.24.0-1.fc38.aarch64                                        
  cpp-12.1.1-4.fc38.aarch64                                                     
  emacs-filesystem-1:28.1-3.fc37.noarch                                         
  expat-2.4.8-2.fc37.aarch64                                                    
  flexiblas-3.2.1-2.fc37.aarch64                                                
  flexiblas-devel-3.2.1-2.fc37.aarch64                                          
  flexiblas-netlib-3.2.1-2.fc37.aarch64                                         
  flexiblas-netlib64-3.2.1-2.fc37.aarch64                                       
  flexiblas-openblas-openmp-3.2.1-2.fc37.aarch64                                
  flexiblas-openblas-openmp64-3.2.1-2.fc37.aarch64                              
  gc-8.0.6-4.fc37.aarch64                                                       
  gcc-12.1.1-4.fc38.aarch64                                                     
  gcc-c++-12.1.1-4.fc38.aarch64                                                 
  gcc-gfortran-12.1.1-4.fc38.aarch64                                            
  gcc-plugin-annobin-12.1.1-4.fc38.aarch64                                      
  glibc-devel-2.36-1.fc37.aarch64                                               
  groff-base-1.22.4-10.fc37.aarch64                                             
  gsl-2.6-7.fc37.aarch64                                                        
  gsl-devel-2.6-7.fc37.aarch64                                                  
  guile22-2.2.7-6.fc37.aarch64                                                  
  hdf5-1.12.1-10.fc37.aarch64                                                   
  hdf5-devel-1.12.1-10.fc37.aarch64                                             
  htslib-1.15.1-1.fc38.aarch64                                                  
  htslib-devel-1.15.1-1.fc38.aarch64                                            
  kernel-headers-5.19.0-1.fc37.aarch64                                          
  libaec-1.0.6-3.fc37.aarch64                                                   
  libaec-devel-1.0.6-3.fc37.aarch64                                             
  libasan-12.1.1-4.fc38.aarch64                                                 
  libatomic-12.1.1-4.fc38.aarch64                                               
  libb2-0.98.1-7.fc37.aarch64                                                   
  libgfortran-12.1.1-4.fc38.aarch64                                             
  libicu-71.1-1.fc37.aarch64                                                    
  libicu-devel-71.1-1.fc37.aarch64                                              
  libmpc-1.2.1-5.fc37.aarch64                                                   
  libstdc++-devel-12.1.1-4.fc38.aarch64                                         
  libtool-ltdl-2.4.7-2.fc37.aarch64                                             
  libubsan-12.1.1-4.fc38.aarch64                                                
  libxcrypt-devel-4.4.28-3.fc38.aarch64                                         
  m4-1.4.19-4.fc37.aarch64                                                      
  make-1:4.3-11.fc37.aarch64                                                    
  mpdecimal-2.5.1-4.fc37.aarch64                                                
  ncurses-6.3-3.20220501.fc37.aarch64                                           
  openblas-0.3.20-2.fc37.aarch64                                                
  openblas-openmp-0.3.20-2.fc37.aarch64                                         
  openblas-openmp64-0.3.20-2.fc37.aarch64                                       
  perl-B-1.83-491.fc37.aarch64                                                  
  perl-Carp-1.52-489.fc37.noarch                                                
  perl-Class-Struct-0.66-491.fc37.noarch                                        
  perl-Data-Dumper-2.184-490.fc37.aarch64                                       
  perl-DynaLoader-1.52-491.fc37.aarch64                                         
  perl-Encode-4:3.19-491.fc37.aarch64                                           
  perl-Errno-1.36-491.fc37.aarch64                                              
  perl-Exporter-5.77-489.fc37.noarch                                            
  perl-Fcntl-1.15-491.fc37.aarch64                                              
  perl-Fedora-VSP-0.001-29.fc37.noarch                                          
  perl-File-Basename-2.85-491.fc37.noarch                                       
  perl-File-Compare-1.100.700-491.fc37.noarch                                   
  perl-File-Copy-2.39-491.fc37.noarch                                           
  perl-File-Find-1.40-491.fc37.noarch                                           
  perl-File-Path-2.18-489.fc37.noarch                                           
  perl-File-Temp-1:0.231.100-489.fc37.noarch                                    
  perl-File-stat-1.12-491.fc37.noarch                                           
  perl-Getopt-Long-1:2.52-489.fc37.noarch                                       
  perl-Getopt-Std-1.13-491.fc37.noarch                                          
  perl-HTTP-Tiny-0.082-1.fc37.noarch                                            
  perl-IO-1.50-491.fc37.aarch64                                                 
  perl-IPC-Open3-1.22-491.fc37.noarch                                           
  perl-MIME-Base64-3.16-489.fc37.aarch64                                        
  perl-POSIX-2.03-491.fc37.aarch64                                              
  perl-PathTools-3.84-489.fc37.aarch64                                          
  perl-Pod-Escapes-1:1.07-489.fc37.noarch                                       
  perl-Pod-Perldoc-3.28.01-490.fc37.noarch                                      
  perl-Pod-Simple-1:3.43-490.fc37.noarch                                        
  perl-Pod-Usage-4:2.03-3.fc37.noarch                                           
  perl-Scalar-List-Utils-5:1.63-489.fc38.aarch64                                
  perl-SelectSaver-1.02-491.fc37.noarch                                         
  perl-Socket-4:2.035-2.fc37.aarch64                                            
  perl-Storable-1:3.26-489.fc37.aarch64                                         
  perl-Symbol-1.09-491.fc37.noarch                                              
  perl-Term-ANSIColor-5.01-490.fc37.noarch                                      
  perl-Term-Cap-1.17-489.fc37.noarch                                            
  perl-Text-ParseWords-3.31-489.fc37.noarch                                     
  perl-Text-Tabs+Wrap-2021.0814-489.fc37.noarch                                 
  perl-Thread-Queue-3.14-489.fc37.noarch                                        
  perl-Time-Local-2:1.300-489.fc37.noarch                                       
  perl-constant-1.33-490.fc37.noarch                                            
  perl-generators-1.13-8.fc37.noarch                                            
  perl-if-0.61.000-491.fc37.noarch                                              
  perl-interpreter-4:5.36.0-491.fc37.aarch64                                    
  perl-libs-4:5.36.0-491.fc37.aarch64                                           
  perl-macros-4:5.36.0-491.fc37.noarch                                          
  perl-mro-1.26-491.fc37.aarch64                                                
  perl-overload-1.35-491.fc37.noarch                                            
  perl-overloading-0.02-491.fc37.noarch                                         
  perl-parent-1:0.238-489.fc37.noarch                                           
  perl-podlators-1:4.14-489.fc37.noarch                                         
  perl-subs-1.04-491.fc37.noarch                                                
  perl-threads-1:2.27-489.fc37.aarch64                                          
  perl-threads-shared-1.64-489.fc37.aarch64                                     
  perl-vars-1.05-491.fc37.noarch                                                
  python-pip-wheel-22.2-1.fc37.noarch                                           
  python-setuptools-wheel-62.6.0-2.fc37.noarch                                  
  python3-3.11.0~rc1-1.fc38.aarch64                                             
  python3-libs-3.11.0~rc1-1.fc38.aarch64                                        
  python3-numpy-1:1.22.0-7.fc37.aarch64                                         
  zlib-devel-1.2.12-4.fc37.aarch64                                              

Complete!
Finish: build setup for mmseq-1.0.11-5.fc38.src.rpm
Start: rpmbuild mmseq-1.0.11-5.fc38.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1598486400
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.4hdiwg
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf mmseq-1.0.11
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/1.0.11.zip
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd mmseq-1.0.11
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #2 (mmseq-zlib.patch):'
Patch #2 (mmseq-zlib.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 -b --suffix .mmseq-zlib.patch --fuzz=0
patching file src/Makefile
+ rm -f bin/offsetGTF-linux bin/postdiff-linux
+ sed -e s/-lblas/-lflexiblas/g -e s/-llapack/-lflexiblas/g -i src/Makefile
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Vxarfc
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/mmseq-1.0.11/.package_note-mmseq-1.0.11-5.fc38.aarch64.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' -f /usr/lib/rpm/generate-rpm-note.sh ']'
+ /usr/lib/rpm/generate-rpm-note.sh mmseq 1.0.11-5.fc38 aarch64
+ cd mmseq-1.0.11
+ cd src
+ make -j4 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
g++ -O3 -c sokal.cc
g++ -fopenmp -O3 -c uh.cpp 
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 hitsio.cpp hitsio.hpp -c hitsio.cpp
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection   -c -o fasta.o fasta.c
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -O3 offsetGTF.cpp -o ../bin/offsetGTF
offsetGTF.cpp: In function 'int main(int, char**)':
offsetGTF.cpp:115:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  115 |       while(gff_ind < gff_positions[chrom].size()) {
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
offsetGTF.cpp:117:57: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
  117 |               pos + tokens[3].size() - tokens[4].size() >= gff_positions[chrom][gff_ind]) {
offsetGTF.cpp:114:11: warning: unused variable 'curoff' [-Wunused-variable]
  114 |       int curoff=offset;
      |           ^~~~~~
offsetGTF.cpp:150:21: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  150 |       while(gff_ind < gff_positions[prevchrom].size()) {
      |             ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
offsetGTF.cpp:163:53: warning: comparison of integer expressions of different signedness: 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} and '__gnu_cxx::__alloc_traits<std::allocator<int>, int>::value_type' {aka 'int'} [-Wsign-compare]
  163 |           pos + tokens[3].size() - tokens[4].size() >= gff_positions[chrom][gff_ind]) {
offsetGTF.cpp:177:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  177 |     while(gff_ind < gff_positions[chrom].size() && gff_positions[chrom][gff_ind] <= pos) {
      |           ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~
offsetGTF.cpp:235:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  235 |     for(int i=5; i < tokens.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~
offsetGTF.cpp:237:12: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  237 |       if(i < tokens.size()-1) {
      |          ~~^~~~~~~~~~~~~~~~~
offsetGTF.cpp:108:7: warning: unused variable 'gff_pos' [-Wunused-variable]
  108 |   int gff_pos= -1;
      |       ^~~~~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -O3 t2g_hits.cpp -o ../bin/t2g_hits
t2g_hits.cpp: In function 'int main(int, char**)':
t2g_hits.cpp:90:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   90 |         for(int i=2; i < tokens.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O2 bms.cpp bms.hpp -c bms.cpp
hitsio.cpp: In member function 'void HitsfileWriter::writeHeaderSchema0()':
hitsio.cpp:163:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  163 |         for(int i = 0; i < transcriptName.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeReadMapRecordSchema0()':
hitsio.cpp:184:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  184 |         for(int i = 0; i < currentReadTranscripts.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeHeaderSchema1()':
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   24 |         if (VAL > numeric_limits<uint32_t>::max()) { \
      |                 ^
hitsio.cpp:191:9: note: in expansion of macro 'WRITE_UINT'
  191 |         WRITE_UINT(ofs, hitsfileSchema);
      |         ^~~~~~~~~~
hitsio.cpp:193:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  193 |         for(int i = 0; i < transcriptName.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: 'std::map<std::__cxx11::basic_string<char>, int>::mapped_type' {aka 'int'} and 'unsigned int' [-Wsign-compare]
   24 |         if (VAL > numeric_limits<uint32_t>::max()) { \
hitsio.cpp:196:17: note: in expansion of macro 'WRITE_UINT'
  196 |                 WRITE_UINT(ofs, transcriptTrueLength[transcriptName[i] ])
      |                 ^~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeReadMapRecordSchema1()':
hitsio.cpp:236:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  236 |         for(int i = 0; i < currentReadTranscripts.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileReader::readHeaderSchema1(std::vector<std::__cxx11::basic_string<char> >*, std::map<std::__cxx11::basic_string<char>, double>*, std::map<std::__cxx11::basic_string<char>, int>*, std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >*, std::vector<std::vector<std::__cxx11::basic_string<char> > >*)':
hitsio.cpp:356:16: warning: unused variable 'nextStrLen' [-Wunused-variable]
  356 |         size_t nextStrLen;
      |                ^~~~~~~~~~
hitsio.cpp: In member function 'bool HitsfileReader::readReadMapRecordTranscriptID(std::string&)':
hitsio.cpp:447:1: warning: control reaches end of non-void function [-Wreturn-type]
  447 | }
      | ^
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -O3 fasta.o extract_transcripts.cpp -o ../bin/extract_transcripts
g++ -DVERSION=1.0.11 -DARMA_64BIT_WORD -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 uh.o sokal.o mmcollapse.cpp -o ../bin/mmcollapse -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
extract_transcripts.cpp: In function 'int main(int, char**)':
extract_transcripts.cpp:122:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  122 |       for(int i=0; i < tokens2.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~
extract_transcripts.cpp:169:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  169 |     for(int i=0; i < tokens.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~
extract_transcripts.cpp:195:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  195 |       for(int i=0; i < it->starts()->size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~~~
extract_transcripts.cpp:203:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  203 |       while(faline < stitch.size()) {
      |             ~~~~~~~^~~~~~~~~~~~~~~
extract_transcripts.cpp:108:7: warning: unused variable 'line' [-Wunused-variable]
  108 |   int line=0;
      |       ^~~~
bms.cpp: In member function 'arma::Col<int> BMS::m2v(arma::Mat<double>)':
bms.cpp:36:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   36 |   for(int i=0; i < P.n_cols; i++) {
      |                ~~^~~~~~~~~~
bms.cpp:37:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   37 |     for(int j=0; j < P.n_rows; j++) {
      |                  ~~^~~~~~~~~~
bms.cpp: In member function 'std::vector<double> BMS::meanvar(arma::Col<double>)':
bms.cpp:76:17: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   76 |   for(int i=0;i < v.n_elem; i++) {
      |               ~~^~~~~~~~~~
bms.cpp: In member function 'void BMS::print(bool)':
bms.cpp:93:30: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   93 |   for(int feature=0; feature < y->n_rows; feature++) {
      |                      ~~~~~~~~^~~~~~~~~~~
bms.cpp:97:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   97 |       for(int i=0; i < M.n_cols; i++) {
      |                    ~~^~~~~~~~~~
bms.cpp:102:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  102 |       for(int l=0; l < P[model].n_cols; l++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::printtune(int)':
bms.cpp:132:30: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  132 |   for(int feature=0; feature < y->n_rows; feature++) {
      |                      ~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_alpha()':
bms.cpp:185:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  185 |     for(int j=0; j < y->n_rows; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_beta()':
bms.cpp:253:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  253 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:255:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  255 |       for(int b=0; b < M.n_cols; b++) {
      |                    ~~^~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_eta()':
bms.cpp:332:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  332 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:334:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  334 |       for(int c=0; c < P[model].n_cols; c++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_sigmasq()':
bms.cpp:415:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  415 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_lambda()':
bms.cpp:504:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  504 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:506:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  506 |       for(int l=0; l < P[model].n_cols; l++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_rho()':
bms.cpp:559:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  559 |     for(int j=0; j < y->n_rows; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::copy_pseudo()':
bms.cpp:582:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  582 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:585:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  585 |     for(int c=0; c < P[0].n_cols; c++) {
      |                  ~~^~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_alpha(int, int, bool)':
bms.cpp:603:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  603 |     for(int j=0; j < y->n_cols; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:610:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  610 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_beta(int, int, bool)':
bms.cpp:631:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  631 |     for(int j=0; j < y->n_cols; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:638:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  638 |     for(int i=0; i < M.n_cols; i++) {
      |                  ~~^~~~~~~~~~
bms.cpp:646:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  646 |     for(int i=0; i < M.n_cols; i++) {
      |                  ~~^~~~~~~~~~
bms.cpp:651:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  651 |     for(int i=0; i < M.n_cols; i++) {
      |                  ~~^~~~~~~~~~
bms.cpp: In member function 'void BMS::update_eta(int, int, bool)':
bms.cpp:663:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  663 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:666:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  666 |       for(int i=0; i < y->n_cols; i++) {
      |                    ~~^~~~~~~~~~~
bms.cpp:673:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  673 |       for(int i=0; i < y->n_cols; i++) {
      |                    ~~^~~~~~~~~~~
bms.cpp:681:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  681 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:686:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  686 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_lambda(int, int, bool)':
bms.cpp:699:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  699 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:704:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  704 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:711:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  711 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_sigmasq(int, int, bool, bool)':
bms.cpp:729:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  729 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:740:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  740 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:751:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  751 |         for(int i=0; i < y->n_cols; i++) {
      |                      ~~^~~~~~~~~~~
bms.cpp:763:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  763 |         for(int i=0; i < y->n_cols; i++) {
      |                      ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_sigmasq_RW(int, int, bool, bool)':
bms.cpp:877:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  877 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'double BMS::log_target_posterior(int, int)':
bms.cpp:931:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  931 |   for(int i=0; i < y->n_cols; i++) {
      |                ~~^~~~~~~~~~~
bms.cpp:940:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  940 |     for(int j=0; j < M.n_cols; j++) {
      |                  ~~^~~~~~~~~~
bms.cpp:947:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  947 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'double BMS::log_target_pseudo(int, int)':
bms.cpp:968:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  968 |     for(int l=0; l < M.n_cols; l++) {
      |                  ~~^~~~~~~~~~
bms.cpp:974:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  974 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::print_pseudo()':
bms.cpp:1086:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1086 |     for(int l=0; l < M.n_cols; l++) {
      |                  ~~^~~~~~~~~~
bms.cpp:1089:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1089 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:1100:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1100 |   for(int i=0; i < y->n_rows; i++) {
      |                ~~^~~~~~~~~~~
bms.cpp:1103:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1103 |       for(int l=0; l < M.n_cols; l++) {
      |                    ~~^~~~~~~~~~
bms.cpp:1106:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1106 |       for(int l=0; l < P[model].n_cols; l++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In constructor 'BMS::BMS(const arma::Mat<double>*, const arma::Mat<double>&, arma::Mat<double>, arma::Mat<double>, arma::Mat<double>, arma::Mat<int>, double, double, double, std::string, gsl_rng**, int, bool)':
bms.cpp:1188:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1188 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:1192:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1192 |         if(C(i,model)+1 > _n.size()) {
      |            ~~~~~~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::initialise_streams(std::string)':
bms.cpp:1348:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1348 |   for(int i=0; i < M.n_cols; i++) {
      |                ~~^~~~~~~~~~
bms.cpp:1354:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1354 |   for(int i=0; i < M.n_cols; i++) {
      |                ~~^~~~~~~~~~
bms.cpp:1360:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1360 |   for(int i=0; i < P[0].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bms.cpp:1366:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1366 |   for(int i=0; i < P[1].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bms.cpp:1372:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1372 |   for(int i=0; i < P[0].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bms.cpp:1378:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1378 |   for(int i=0; i < P[1].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
mmcollapse.cpp: In function 'void get_unidentifiable_transcripts(std::string, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, std::map<std::__cxx11::basic_string<char>, double> >&, std::map<std::__cxx11::basic_string<char>, std::map<std::__cxx11::basic_string<char>, double> >&, std::map<std::__cxx11::basic_string<char>, std::map<std::__cxx11::basic_string<char>, double> >&, std::map<std::__cxx11::basic_string<char>, int>&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, bool>&)':
mmcollapse.cpp:158:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  158 |   for(int i=0; i < tokens.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~
mmcollapse.cpp:213:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  213 |     for(int i=0; i < tokens2.size(); i++) isIdent[tokens2[i]]=1;
      |                  ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:259:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  259 |   for(int i=0; i < tokens.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~
mmcollapse.cpp: In function 'void collapse(arma::cube&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, int>&, std::vector<int, std::allocator<int> >)':
mmcollapse.cpp:400:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  400 |   for(int s=0; s < R.n_slices; s++) {
      |                ~~^~~~~~~~~~~~
mmcollapse.cpp:401:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  401 |     for(int t=0; t < candidates.size(); t++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~
mmcollapse.cpp:402:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  402 |       for(int j=1; j < indexes.size(); j++) {
      |                    ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:414:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  414 |     for(int j=1; j < indexes.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:417:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  417 |       for(int i=0; i < R.n_cols; i++) {
      |                    ~~^~~~~~~~~~
mmcollapse.cpp:426:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  426 |   for(int i=0; i < indexes.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:431:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  431 |   for(int i=1; i < tset.size(); i++) {
      |                ~~^~~~~~~~~~~~~
mmcollapse.cpp:437:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  437 |   for(int i=1; i < indexes.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp: In function 'std::map<int, int> join_traces(arma::mat&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >)':
mmcollapse.cpp:445:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  445 |   for(int t=0; t < allnames.size(); t++) tmap[allnames[t]]=t;
      |                ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:452:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  452 |   for(int c=0; c < candidates.size(); c++) {
      |                ~~^~~~~~~~~~~~~~~~~~~
mmcollapse.cpp:456:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  456 |     for(int t=0; t < tokens.size(); t++) {
      |                  ~~^~~~~~~~~~~~~~~
mmcollapse.cpp:464:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  464 |     for(int t=1; t < indexes.size(); t++) {
      |                  ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:469:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  469 |     for(int t=1; t < indexes.size(); t++) {
      |                  ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:476:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  476 |   for(int i=0; i < toshed.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~
mmcollapse.cpp: In function 'void mean_corrs(const arma::cube&, const arma::umat&, arma::mat&, arma::mat&, std::vector<int, std::allocator<int> >, std::vector<int, std::allocator<int> >, double)':
mmcollapse.cpp:486:21: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  486 |     for(int v= 0; v < R.n_rows; v++) {
      |                   ~~^~~~~~~~~~
mmcollapse.cpp:492:22: warning: comparison of integer expressions of different signedness: 'int' and 'arma::uword' {aka 'long long unsigned int'} [-Wsign-compare]
  492 |       for(int i=0; i < u.size(); i++) {
      |                    ~~^~~~~~~~~~
mmcollapse.cpp: In function 'void get_corrs(arma::cube&, arma::mat&, const std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, std::map<std::__cxx11::basic_string<char>, int>&)':
mmcollapse.cpp:519:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  519 |   for(int s=0; s < basenames.size(); s++) {
      |                ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:543:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  543 |         for(int t=0; t < tokens.size(); t++) {
      |                      ~~^~~~~~~~~~~~~~~
mmcollapse.cpp: In function 'int main(int, char**)':
mmcollapse.cpp:632:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  632 |   for(int i=1; i < basenames.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:691:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  691 |   for(int s=0; s < basenames.size(); s++) {
      |                ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:707:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  707 |   for(int i=0; i < candidates.size(); i++) ts.push_back(i);
      |                ~~^~~~~~~~~~~~~~~~~~~
mmcollapse.cpp:732:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  732 |     for(int i=0 ;i < maxcorrs.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:738:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  738 |     for(int i=0 ;i < mincorrs.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:802:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  802 |         for(int i=0 ;i < maxcorrs.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:808:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  808 |         for(int i=0 ;i < mincorrs.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~~~
mmcollapse.cpp:827:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  827 |   for(int s=0; s < basenames.size(); s++) {
      |                ~~^~~~~~~~~~~~~~~~~~
mmcollapse.cpp:852:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  852 |       for(int t=0; t < tokens.size(); t++) {
      |                    ~~^~~~~~~~~~~~~~~
mmcollapse.cpp:882:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  882 |       for(int t=0; t < tokens2.size(); t++) {
      |                    ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:934:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  934 |     for(int t=0; t < M.n_cols; t++) {
      |                  ~~^~~~~~~~~~
mmcollapse.cpp:963:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  963 |     for(int i=1; i < tokens2.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~~
mmcollapse.cpp:976:21: warning: comparison of integer expressions of different signedness: 'boost::numeric::ublas::compressed_matrix<bool>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  976 |       if(MM.size1() < i+1 ) factor1=2;
      |          ~~~~~~~~~~~^~~~~
mmcollapse.cpp:977:21: warning: comparison of integer expressions of different signedness: 'boost::numeric::ublas::compressed_matrix<bool>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  977 |       if(MM.size2() < j+1 ) factor2=2;
      |          ~~~~~~~~~~~^~~~~
mmcollapse.cpp:1010:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1010 |     for(int t=0; t < ids.size(); t++) {
      |                  ~~^~~~~~~~~~~~
mmcollapse.cpp:1083:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1083 |     for(int i=0; i < ids.size(); i++) {
      |                  ~~^~~~~~~~~~~~
mmcollapse.cpp:1092:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1092 |     for(int v = 0; v < M.n_cols; v++) {
      |                    ~~^~~~~~~~~~
mmcollapse.cpp:840:9: warning: unused variable 'isident' [-Wunused-variable]
  840 |     int isident=0;
      |         ^~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeHeaderSchema0()':
hitsio.cpp:163:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  163 |         for(int i = 0; i < transcriptName.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeReadMapRecordSchema0()':
hitsio.cpp:184:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  184 |         for(int i = 0; i < currentReadTranscripts.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeHeaderSchema1()':
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   24 |         if (VAL > numeric_limits<uint32_t>::max()) { \
      |                 ^
hitsio.cpp:191:9: note: in expansion of macro 'WRITE_UINT'
  191 |         WRITE_UINT(ofs, hitsfileSchema);
      |         ^~~~~~~~~~
hitsio.cpp:193:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  193 |         for(int i = 0; i < transcriptName.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp:24:17: warning: comparison of integer expressions of different signedness: 'std::map<std::__cxx11::basic_string<char>, int>::mapped_type' {aka 'int'} and 'unsigned int' [-Wsign-compare]
   24 |         if (VAL > numeric_limits<uint32_t>::max()) { \
hitsio.cpp:196:17: note: in expansion of macro 'WRITE_UINT'
  196 |                 WRITE_UINT(ofs, transcriptTrueLength[transcriptName[i] ])
      |                 ^~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileWriter::writeReadMapRecordSchema1()':
hitsio.cpp:236:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  236 |         for(int i = 0; i < currentReadTranscripts.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
hitsio.cpp: In member function 'void HitsfileReader::readHeaderSchema1(std::vector<std::__cxx11::basic_string<char> >*, std::map<std::__cxx11::basic_string<char>, double>*, std::map<std::__cxx11::basic_string<char>, int>*, std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >*, std::vector<std::vector<std::__cxx11::basic_string<char> > >*)':
hitsio.cpp:356:16: warning: unused variable 'nextStrLen' [-Wunused-variable]
  356 |         size_t nextStrLen;
      |                ^~~~~~~~~~
hitsio.cpp: In member function 'bool HitsfileReader::readReadMapRecordTranscriptID(std::string&)':
hitsio.cpp:447:1: warning: control reaches end of non-void function [-Wreturn-type]
  447 | }
      | ^
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 sokal.o uh.o hitsio.o mmseq.cpp -o ../bin/mmseq -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 fasta.o hitsio.o bam2hits.cpp -o ../bin/bam2hits -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
mmseq.cpp: In function 'std::vector<double> meanvar(std::vector<double>, double, double)':
mmseq.cpp:130:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  130 |   for(int i=0;i < v.size(); i++) {
      |               ~~^~~~~~~~~~
mmseq.cpp: In function 'int main(int, char**)':
mmseq.cpp:244:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  244 |       for(int i=0; i < tokens.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~
mmseq.cpp:423:20: warning: comparison of integer expressions of different signedness: 'boost::numeric::ublas::compressed_matrix<bool>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  423 |       if(M.size1() < m ) factor1=2;
      |          ~~~~~~~~~~^~~
mmseq.cpp:424:20: warning: comparison of integer expressions of different signedness: 'boost::numeric::ublas::compressed_matrix<bool>::size_type' {aka 'long unsigned int'} and 'int' [-Wsign-compare]
  424 |       if(M.size2() < n ) factor2=2;
      |          ~~~~~~~~~~^~~
mmseq.cpp:594:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  594 |   for(unsigned t=0; t < n; t++)  {
      |                     ~~^~~
mmseq.cpp:736:25: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  736 |     for(unsigned t=0; t < n; t++)
      |                       ~~^~~
mmseq.cpp:765:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  765 |       for(unsigned t=0; t < n; t++)
      |                         ~~^~~
mmseq.cpp:774:11: warning: unused variable 'threadid' [-Wunused-variable]
  774 |       int threadid=OMP_GET_THREAD_NUM;
      |           ^~~~~~~~
mmseq.cpp:829:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  829 |   for(unsigned t=0; t < n; t++)
      |                     ~~^~~
mmseq.cpp:912:27: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
  912 |       for(unsigned t=0; t < n; t++) {
      |                         ~~^~~
mmseq.cpp:940:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  940 |   for(int i=0; i < identical_transcripts.size() * trace_length; i++) mu_trace_identical[i]=0;
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:961:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  961 |   for(int i=0; i < gene2transcripts.size() * trace_length; i++) mu_trace_gene[i]=0;
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1098:23: warning: comparison of integer expressions of different signedness: 'unsigned int' and 'int' [-Wsign-compare]
 1098 |   for(unsigned t=0; t < n; t++) gofs << indexSid[t] << " ";
      |                     ~~^~~
mmseq.cpp:1112:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1112 |   for(int i=0; i < percentiles.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1136:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1136 |     for(int j=0; j < percentiles.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1144:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1144 |     for(int j=0; j < percentiles.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1149:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1149 |   for(int i=0;i < identical_transcripts.size(); i++) {
      |               ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1156:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1156 |     for(int j=0; j < percentiles.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1161:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1161 |   for(int i=0;i < gene2transcripts.size(); i++) {
      |               ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1168:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1168 |     for(int j=0; j < percentiles.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1179:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1179 |     for(int j=0; j < percentiles.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1189:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1189 |     for(int j=0; j < percentiles.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1208:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1208 |     for(int t=0; t < identical_transcripts.size() ; t++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1212:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1212 |     for(int t=0; t < gene2transcripts.size(); t++){
      |                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1226:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1226 |   for(int i=0; i < identical_transcripts.size() ; i++) meanmu_identical[i] /= trace_length;
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1227:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1227 |   for(int i=0; i < gene2transcripts.size(); i++) meanmu_gene[i]/= trace_length;
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1330:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1330 |   for(int t=0; t < identical_transcripts.size(); t++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1349:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::map<std::__cxx11::basic_string<char>, std::vector<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1349 |   for(int g=0; g < gene2transcripts.size(); g++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1473:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1473 |   for(int i=0; i < percentiles.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1475:9: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1475 |     if(i==percentiles.size()-1) {
      |        ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1482:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1482 |   for(int i=0; i < percentiles.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1484:9: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1484 |     if(i==percentiles.size()-1) {
      |        ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1506:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1506 |       for(int i=0; i < percentiles.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1508:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1508 |         if(i==percentiles.size()-1) {
      |            ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1514:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1514 |       for(int i=0; i < percentiles.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1516:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1516 |         if(i==percentiles.size()-1) {
      |            ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1536:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1536 |       for(int i=0; i < percentiles.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1538:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1538 |         if(i==percentiles.size()-1) {
      |            ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1544:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1544 |       for(int i=0; i < percentiles.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1546:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1546 |         if(i==percentiles.size()-1) {
      |            ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1560:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1560 |   for(int i=0; i < percentiles.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1562:9: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1562 |     if(i==percentiles.size()-1) {
      |        ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1582:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1582 |         for(int i=0; i < percentiles.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1584:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1584 |           if(i==percentiles.size()-1) {
      |              ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1599:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1599 |         for(int i=0; i < percentiles.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1601:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1601 |           if(i==percentiles.size()-1) {
      |              ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1619:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1619 |   for(int i=0; i < percentiles.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1621:9: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1621 |     if(i==percentiles.size()-1) {
      |        ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1644:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1644 |         for(int i=0; i < percentiles.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1646:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1646 |           if(i==percentiles.size()-1) {
      |              ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1656:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1656 |         for(int i=0; i < percentiles.size(); i++) {
      |                      ~~^~~~~~~~~~~~~~~~~~~~
mmseq.cpp:1658:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<double>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1658 |           if(i==percentiles.size()-1) {
      |              ~^~~~~~~~~~~~~~~~~~~~~~
mmseq.cpp:308:8: warning: unused variable 'buf16384' [-Wunused-variable]
  308 |   char buf16384[16384];
      |        ^~~~~~~~
mmseq.cpp:391:8: warning: variable 'doublehit' set but not used [-Wunused-but-set-variable]
  391 |   bool doublehit;
      |        ^~~~~~~~~
bms.cpp: In member function 'arma::Col<int> BMS::m2v(arma::Mat<double>)':
bms.cpp:36:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   36 |   for(int i=0; i < P.n_cols; i++) {
      |                ~~^~~~~~~~~~
bms.cpp:37:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   37 |     for(int j=0; j < P.n_rows; j++) {
      |                  ~~^~~~~~~~~~
bms.cpp: In member function 'std::vector<double> BMS::meanvar(arma::Col<double>)':
bms.cpp:76:17: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   76 |   for(int i=0;i < v.n_elem; i++) {
      |               ~~^~~~~~~~~~
bms.cpp: In member function 'void BMS::print(bool)':
bms.cpp:93:30: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   93 |   for(int feature=0; feature < y->n_rows; feature++) {
      |                      ~~~~~~~~^~~~~~~~~~~
bms.cpp:97:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
   97 |       for(int i=0; i < M.n_cols; i++) {
      |                    ~~^~~~~~~~~~
bms.cpp:102:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  102 |       for(int l=0; l < P[model].n_cols; l++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::printtune(int)':
bms.cpp:132:30: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  132 |   for(int feature=0; feature < y->n_rows; feature++) {
      |                      ~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_alpha()':
bms.cpp:185:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  185 |     for(int j=0; j < y->n_rows; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_beta()':
bms.cpp:253:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  253 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:255:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  255 |       for(int b=0; b < M.n_cols; b++) {
      |                    ~~^~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_eta()':
bms.cpp:332:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  332 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:334:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  334 |       for(int c=0; c < P[model].n_cols; c++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_sigmasq()':
bms.cpp:415:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  415 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_lambda()':
bms.cpp:504:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  504 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:506:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  506 |       for(int l=0; l < P[model].n_cols; l++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::set_pseudoprior_rho()':
bms.cpp:559:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  559 |     for(int j=0; j < y->n_rows; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::copy_pseudo()':
bms.cpp:582:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  582 |   for(int j=0; j < y->n_rows; j++) {
      |                ~~^~~~~~~~~~~
bms.cpp:585:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  585 |     for(int c=0; c < P[0].n_cols; c++) {
      |                  ~~^~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_alpha(int, int, bool)':
bms.cpp:603:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  603 |     for(int j=0; j < y->n_cols; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:610:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  610 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_beta(int, int, bool)':
bms.cpp:631:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  631 |     for(int j=0; j < y->n_cols; j++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:638:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  638 |     for(int i=0; i < M.n_cols; i++) {
      |                  ~~^~~~~~~~~~
bms.cpp:646:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  646 |     for(int i=0; i < M.n_cols; i++) {
      |                  ~~^~~~~~~~~~
bms.cpp:651:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  651 |     for(int i=0; i < M.n_cols; i++) {
      |                  ~~^~~~~~~~~~
bms.cpp: In member function 'void BMS::update_eta(int, int, bool)':
bms.cpp:663:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  663 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:666:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  666 |       for(int i=0; i < y->n_cols; i++) {
      |                    ~~^~~~~~~~~~~
bms.cpp:673:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  673 |       for(int i=0; i < y->n_cols; i++) {
      |                    ~~^~~~~~~~~~~
bms.cpp:681:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  681 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:686:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  686 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_lambda(int, int, bool)':
bms.cpp:699:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  699 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:704:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  704 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:711:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  711 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_sigmasq(int, int, bool, bool)':
bms.cpp:729:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  729 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:740:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  740 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:751:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  751 |         for(int i=0; i < y->n_cols; i++) {
      |                      ~~^~~~~~~~~~~
bms.cpp:763:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  763 |         for(int i=0; i < y->n_cols; i++) {
      |                      ~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::update_sigmasq_RW(int, int, bool, bool)':
bms.cpp:877:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  877 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp: In member function 'double BMS::log_target_posterior(int, int)':
bms.cpp:931:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  931 |   for(int i=0; i < y->n_cols; i++) {
      |                ~~^~~~~~~~~~~
bms.cpp:940:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  940 |     for(int j=0; j < M.n_cols; j++) {
      |                  ~~^~~~~~~~~~
bms.cpp:947:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  947 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'double BMS::log_target_pseudo(int, int)':
bms.cpp:968:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  968 |     for(int l=0; l < M.n_cols; l++) {
      |                  ~~^~~~~~~~~~
bms.cpp:974:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  974 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp: In member function 'void BMS::print_pseudo()':
bms.cpp:1086:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1086 |     for(int l=0; l < M.n_cols; l++) {
      |                  ~~^~~~~~~~~~
bms.cpp:1089:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1089 |     for(int l=0; l < P[model].n_cols; l++) {
      |                  ~~^~~~~~~~~~~~~~~~~
bms.cpp:1100:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1100 |   for(int i=0; i < y->n_rows; i++) {
      |                ~~^~~~~~~~~~~
bms.cpp:1103:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1103 |       for(int l=0; l < M.n_cols; l++) {
      |                    ~~^~~~~~~~~~
bms.cpp:1106:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1106 |       for(int l=0; l < P[model].n_cols; l++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bms.cpp: In constructor 'BMS::BMS(const arma::Mat<double>*, const arma::Mat<double>&, arma::Mat<double>, arma::Mat<double>, arma::Mat<double>, arma::Mat<int>, double, double, double, std::string, gsl_rng**, int, bool)':
bms.cpp:1188:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1188 |     for(int i=0; i < y->n_cols; i++) {
      |                  ~~^~~~~~~~~~~
bms.cpp:1192:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
 1192 |         if(C(i,model)+1 > _n.size()) {
      |            ~~~~~~~~~~~~~^~~~~~~~~~~
bms.cpp: In member function 'void BMS::initialise_streams(std::string)':
bms.cpp:1348:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1348 |   for(int i=0; i < M.n_cols; i++) {
      |                ~~^~~~~~~~~~
bms.cpp:1354:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1354 |   for(int i=0; i < M.n_cols; i++) {
      |                ~~^~~~~~~~~~
bms.cpp:1360:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1360 |   for(int i=0; i < P[0].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bms.cpp:1366:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1366 |   for(int i=0; i < P[1].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bms.cpp:1372:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1372 |   for(int i=0; i < P[0].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bms.cpp:1378:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
 1378 |   for(int i=0; i < P[1].n_cols; i++) {
      |                ~~^~~~~~~~~~~~~
bam2hits.cpp: In function 'void outputMergeHeaders(std::vector<FastaRecord>&, char, const char*, bool, HitsfileWriter&)':
bam2hits.cpp:109:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<FastaRecord>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  109 |   for(int i=0; i < sortedfastas.size()-1; i++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:119:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<FastaRecord>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  119 |       for(int j=0; j < curSet.size()-1; j++) {
      |                    ~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:137:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<FastaRecord>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  137 |   for(int j=0; j < curSet.size()-1; j++) {
      |                ~~^~~~~~~~~~~~~~~~~
bam2hits.cpp: In function 'std::vector<Alignment> repetitiveTranscriptFilter(std::vector<Alignment>&, int)':
bam2hits.cpp:218:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<Alignment>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  218 |   for(int j=0; j < alns.size(); j++) {
      |                ~~^~~~~~~~~~~~~
bam2hits.cpp:219:10: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  219 |     if(i < torem.size() && j==torem[i]) {
      |        ~~^~~~~~~~~~~~~~
bam2hits.cpp: In function 'int main(int, char**)':
bam2hits.cpp:518:15: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  518 |         if(_B != tg[0].size()-2) {
      |            ~~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:520:17: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  520 |           if(_A == tg[0].size()-2) {
      |              ~~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:522:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  522 |             if(_A != tg[1].size()-2) {
      |                ~~~^~~~~~~~~~~~~~~~~
bam2hits.cpp:558:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  558 |       for(int i=1; i < tokens2.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~
bam2hits.cpp:609:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<FastaRecord>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  609 |     for(int i=0; i < fastas.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~
bam2hits.cpp:645:19: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<FastaRecord>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  645 |     for(int i=0;i < fastas.size(); i++) transcriptCounts[i] /= (double)fastas[i].seq().size();
      |                 ~~^~~~~~~~~~~~~~~
bam2hits.cpp:659:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<FastaRecord>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  659 |     for(int i=0; i < fastas.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~
bam2hits.cpp:662:25: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  662 |         for(int j =0; j < fastas[i].seq().size(); j++) {
      |                       ~~^~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:663:44: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  663 |           int tag = (j <= MSEQ_BEFORE || j >= fastas[i].seq().size()-MSEQ_AFTER) ? -2 : 0;
      |                                          ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:791:36: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  791 |       for(int j=MSEQ_BEFORE + 1; j <= fastas[i].seq().length()-MSEQ_AFTER; j++) {
      |                                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:920:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  920 |     for(int j=1; j < frequencies.size()-WINDOWFORISIZEMODE + 1; j++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:948:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  948 |     for(int i=0; i < testIsizes.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~
bam2hits.cpp:959:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  959 |     for(int i=0; i < heights.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~~
bam2hits.cpp:997:24: warning: comparison of integer expressions of different signedness: 'int' and 'std::__cxx11::basic_string<char>::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  997 |       for(int fl=1; fl <= (it->seq()).size(); fl++) {
      |                     ~~~^~~~~~~~~~~~~~~~~~~~~
bam2hits.cpp:1091:56: warning: comparing the result of pointer addition '(bam_aux_get(((const bam1_t*)line), ((const char*)"NM")) + ((sizetype)ait.__gnu_cxx::__normal_iterator<Alignment*, std::vector<Alignment> >::operator->()->Alignment::NM()))' and NULL [-Waddress]
 1091 |             ait->NM(ait->NM() + bam_aux_get(line,"NM") == NULL ? 0 : bam_aux2i(bam_aux_get(line,"NM")));
      |                                                        ^
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O3 hitsio.o hitstools.cpp -o ../bin/hitstools -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
In file included from /usr/include/c++/12/ios:40,
                 from /usr/include/c++/12/ostream:38,
                 from /usr/include/c++/12/iostream:39,
                 from mmseq.cpp:18:
In function 'std::char_traits<char>::copy(char*, char const*, unsigned long)',
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_copy(char*, char const*, unsigned long)' at /usr/include/c++/12/bits/basic_string.h:423:21,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' at /usr/include/c++/12/bits/basic_string.tcc:532:22,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(unsigned long, unsigned long, char const*, unsigned long)' at /usr/include/c++/12/bits/basic_string.h:2171:19,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(__gnu_cxx::__normal_iterator<char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, __gnu_cxx::__normal_iterator<char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, char const*, char const*)' at /usr/include/c++/12/bits/basic_string.h:2380:22,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::insert<char const*, void>(__gnu_cxx::__normal_iterator<char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, char const*, char const*)__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >' at /usr/include/c++/12/bits/basic_string.h:1798:17,
    inlined from 'boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::write(char const*, long)' at /usr/include/boost/iostreams/device/back_inserter.hpp:28:26,
    inlined from 'boost::iostreams::detail::write_device_impl<boost::iostreams::output>::put<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >(boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >&, boost::iostreams::char_type_of<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::type)bool' at /usr/include/boost/iostreams/write.hpp:112:21,
    inlined from 'boost::iostreams::put<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >(boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >&, boost::iostreams::char_type_of<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::type)bool' at /usr/include/boost/iostreams/write.hpp:44:43,
    inlined from 'boost::iostreams::basic_gzip_compressor<std::allocator<char> >::write_long<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >(long, boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >&, mpl_::bool_<true>)void [clone .isra.0]' at /usr/include/boost/iostreams/filter/gzip.hpp:282:30:
/usr/include/c++/12/bits/char_traits.h:431:56: warning: 'memcpy' accessing 9223372036854775810 or more bytes at offsets -4611686018427387902 and [-4611686018427387903, 4611686018427387904] may overlap up to 9223372036854775813 bytes at offset -3 [-Wrestrict]
  431 |         return static_cast<char_type*>(__builtin_memcpy(__s1, __s2, __n));
      |                                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
In function 'std::char_traits<char>::copy(char*, char const*, unsigned long)',
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_S_copy(char*, char const*, unsigned long)' at /usr/include/c++/12/bits/basic_string.h:423:21,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::_M_replace(unsigned long, unsigned long, char const*, unsigned long)' at /usr/include/c++/12/bits/basic_string.tcc:532:22,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(unsigned long, unsigned long, char const*, unsigned long)' at /usr/include/c++/12/bits/basic_string.h:2171:19,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::replace(__gnu_cxx::__normal_iterator<char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, __gnu_cxx::__normal_iterator<char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, char const*, char const*)' at /usr/include/c++/12/bits/basic_string.h:2380:22,
    inlined from 'std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> >::insert<char const*, void>(__gnu_cxx::__normal_iterator<char const*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >, char const*, char const*)__gnu_cxx::__normal_iterator<char*, std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >' at /usr/include/c++/12/bits/basic_string.h:1798:17,
    inlined from 'boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >::write(char const*, long)' at /usr/include/boost/iostreams/device/back_inserter.hpp:28:26,
    inlined from 'boost::iostreams::detail::write_device_impl<boost::iostreams::output>::put<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >(boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >&, boost::iostreams::char_type_of<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::type)bool' at /usr/include/boost/iostreams/write.hpp:112:21,
    inlined from 'boost::iostreams::put<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >(boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >&, boost::iostreams::char_type_of<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >::type)bool' at /usr/include/boost/iostreams/write.hpp:44:43,
    inlined from 'boost::iostreams::basic_gzip_compressor<std::allocator<char> >::write_long<boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > > >(long, boost::iostreams::back_insert_device<std::__cxx11::basic_string<char, std::char_traits<char>, std::allocator<char> > >&, mpl_::bool_<true>)void [clone .isra.0]' at /usr/include/boost/iostreams/filter/gzip.hpp:285:30:
/usr/include/c++/12/bits/char_traits.h:431:56: warning: 'memcpy' accessing 9223372036854775810 or more bytes at offsets -4611686018427387902 and [-4611686018427387903, 4611686018427387904] may overlap up to 9223372036854775813 bytes at offset -3 [-Wrestrict]
  431 |         return static_cast<char_type*>(__builtin_memcpy(__s1, __s2, __n));
      |                                        ~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~
hitstools.cpp: In function 'void convert(char*, std::string)':
hitstools.cpp:51:26: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   51 |         for(int i = 0; i < transcriptName.size(); i++) {
      |                        ~~^~~~~~~~~~~~~~~~~~~~~~~
hitstools.cpp: In function 'int main(int, char**)':
hitstools.cpp:96:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
   96 |                 for(int i = 0; i < transcriptName.size(); i++) {
      |                                ~~^~~~~~~~~~~~~~~~~~~~~~~
hitstools.cpp:136:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  136 |     for(int i = 0; i < transcriptName.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~~~~~~
g++ -DVERSION=1.0.11 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fopenmp -O2 bms.o mmdiff.cpp -o ../bin/mmdiff -lgsl -lgslcblas -lboost_regex -lhts -lboost_iostreams -lflexiblas -lflexiblas -Wl,--as-needed -lz -lgfortran
In function 'move',
    inlined from '_S_move' at /usr/include/c++/12/bits/basic_string.h:433:21,
    inlined from '_M_replace' at /usr/include/c++/12/bits/basic_string.tcc:531:22,
    inlined from 'replace' at /usr/include/c++/12/bits/basic_string.h:2171:19,
    inlined from 'replace' at /usr/include/c++/12/bits/basic_string.h:2380:22,
    inlined from 'insert' at /usr/include/c++/12/bits/basic_string.h:1798:17,
    inlined from 'write' at /usr/include/boost/iostreams/device/back_inserter.hpp:28:26,
    inlined from 'put' at /usr/include/boost/iostreams/write.hpp:112:21,
    inlined from 'put' at /usr/include/boost/iostreams/write.hpp:44:43,
    inlined from 'write_long.constprop' at /usr/include/boost/iostreams/filter/gzip.hpp:284:30:
/usr/include/c++/12/bits/char_traits.h:419:57: warning: '__builtin_memmove' reading 2 or more bytes from a region of size 1 [-Wstringop-overread]
  419 |         return static_cast<char_type*>(__builtin_memmove(__s1, __s2, __n));
      |                                                         ^
/usr/include/boost/iostreams/write.hpp: In function 'write_long.constprop':
/usr/include/boost/iostreams/write.hpp:43:6: note: source object 'c' of size 1
   43 | bool put(T& t, typename char_type_of<T>::type c)
      |      ^
In function 'move',
    inlined from '_S_move' at /usr/include/c++/12/bits/basic_string.h:433:21,
    inlined from '_M_replace' at /usr/include/c++/12/bits/basic_string.tcc:531:22,
    inlined from 'replace' at /usr/include/c++/12/bits/basic_string.h:2171:19,
    inlined from 'replace' at /usr/include/c++/12/bits/basic_string.h:2380:22,
    inlined from 'insert' at /usr/include/c++/12/bits/basic_string.h:1798:17,
    inlined from 'write' at /usr/include/boost/iostreams/device/back_inserter.hpp:28:26,
    inlined from 'put' at /usr/include/boost/iostreams/write.hpp:112:21,
    inlined from 'put' at /usr/include/boost/iostreams/write.hpp:44:43,
    inlined from 'write_long.constprop' at /usr/include/boost/iostreams/filter/gzip.hpp:285:30:
/usr/include/c++/12/bits/char_traits.h:419:57: warning: '__builtin_memmove' reading 2 or more bytes from a region of size 1 [-Wstringop-overread]
  419 |         return static_cast<char_type*>(__builtin_memmove(__s1, __s2, __n));
      |                                                         ^
/usr/include/boost/iostreams/write.hpp: In function 'write_long.constprop':
/usr/include/boost/iostreams/write.hpp:43:6: note: source object 'c' of size 1
   43 | bool put(T& t, typename char_type_of<T>::type c)
      |      ^
mmdiff.cpp: In function 'void parse_mmseq(std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >, std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >&, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<double>&, int, int, double, bool)':
mmdiff.cpp:100:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  100 |   for(int i=0; i < filenames.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:111:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  111 |     for(int j=0; j < tokens.size(); j++) {
      |                  ~~^~~~~~~~~~~~~~~
mmdiff.cpp:138:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  138 |       if(k + 1 > features.size()) {
      |          ~~~~~~^~~~~~~~~~~~~~~~~
mmdiff.cpp:147:14: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  147 |       if(k+1 > y.n_rows) {
      |          ~~~~^~~~~~~~~~
mmdiff.cpp:152:20: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
  152 |       if(!useprops && tokens[lmg_ind]=="NA" || useprops && tokens[mp_ind]=="NA") {
      |          ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:173:62: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  173 |   if(range_start >=0 && range_end > range_start && range_end < y.n_rows) {
      |                                                    ~~~~~~~~~~^~~~~~~~~~
mmdiff.cpp:94:46: warning: variable 'mcse_ind' set but not used [-Wunused-but-set-variable]
   94 |   int feature_ind=-1, lmg_ind=-1, sd_ind=-1, mcse_ind=-1, iact_ind=-1, mp_ind=-1, sp_ind=-1, uh_ind=-1;
      |                                              ^~~~~~~~
mmdiff.cpp:94:59: warning: variable 'iact_ind' set but not used [-Wunused-but-set-variable]
   94 |   int feature_ind=-1, lmg_ind=-1, sd_ind=-1, mcse_ind=-1, iact_ind=-1, mp_ind=-1, sp_ind=-1, uh_ind=-1;
      |                                                           ^~~~~~~~
mmdiff.cpp: In function 'void apply_normalisation(std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >, arma::Mat<double>&, arma::Mat<double>&, double)':
mmdiff.cpp:212:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  212 |   for(int i=0; i < uh.n_rows; i++) {
      |                ~~^~~~~~~~~~~
mmdiff.cpp:214:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  214 |     for(int j=0; j < uh.n_cols; j++) {
      |                  ~~^~~~~~~~~~~
mmdiff.cpp:230:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  230 |   for(int i=0; i < use.size(); i++) {
      |                ~~^~~~~~~~~~~~
mmdiff.cpp:232:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  232 |     for(int j=0; j < y.n_cols; j++) {
      |                  ~~^~~~~~~~~~
mmdiff.cpp:239:28: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  239 |   for(int sample=0; sample < y.n_cols; sample++) {
      |                     ~~~~~~~^~~~~~~~~~
mmdiff.cpp:241:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  241 |     for(int i=0; i < use.size(); i++) {
      |                  ~~^~~~~~~~~~~~
mmdiff.cpp:246:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  246 |     for(int i=0; i < y.n_rows; i++) {
      |                  ~~^~~~~~~~~~
mmdiff.cpp: In function 'void apply_permutation(arma::Mat<double>&, arma::Mat<double>&)':
mmdiff.cpp:257:17: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  257 |   for(int j=0; j< y.n_cols; j++) randinds.push_back(j);
      |                ~^~~~~~~~~~
mmdiff.cpp:258:18: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  258 |   for(int i=0; i < y.n_rows; i++) {
      |                ~~^~~~~~~~~~
mmdiff.cpp:260:20: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  260 |     for(int j=0; j < y.n_cols; j++) {
      |                  ~~^~~~~~~~~~
mmdiff.cpp: In function 'void parse_matrices(std::string, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<double>&, arma::Mat<int>&, int)':
mmdiff.cpp:310:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  310 |     for(int t=0; t < tokens.size(); t++) {
      |                  ~~^~~~~~~~~~~~~~~
mmdiff.cpp: In function 'int main(int, char**)':
mmdiff.cpp:420:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  420 |       for(int i=0; i < arguments.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:431:22: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  431 |       for(int i=0; i < arguments.size(); i++) {
      |                    ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:439:16: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  439 |       while(ss < arguments.size()) {
      |             ~~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:451:13: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  451 |       if(ss != arguments.size()) {
      |          ~~~^~~~~~~~~~~~~~~~~~~
mmdiff.cpp:578:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  578 |   for(int i=0; i < arguments.size(); i++) {
      |                ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:640:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<int, std::allocator<int> >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  640 |     for(int i=0; i < simple_de.size(); i++) {
      |                  ~~^~~~~~~~~~~~~~~~~~
mmdiff.cpp:759:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
  759 |     if(inburnin && iter == OUTLEN/10 || !inburnin && iter==tuneiters) {
      |        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:764:32: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  764 |     for(int feature=0; feature < features.size(); feature++) {
      |                        ~~~~~~~~^~~~~~~~~~~~~~~~~
mmdiff.cpp:837:17: warning: suggest parentheses around '&&' within '||' [-Wparentheses]
  837 |     if(inburnin && iter % subsample_burnin ==0 || !inburnin && iter >= tuneiters && (iter - tuneiters) % subsample_iter == 0) {
      |        ~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:886:22: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  886 |       for(int l=0; l < M.n_cols; l++) {
      |                    ~~^~~~~~~~~~
mmdiff.cpp:898:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  898 |   for(int f=0; f < samplenames.size(); f++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:902:22: warning: comparison of integer expressions of different signedness: 'int' and 'const std::__cxx11::basic_string<char>::size_type' {aka 'const long unsigned int'} [-Wsign-compare]
  902 |       found2 = found2==string::npos ? -1 : found2;
      |                ~~~~~~^~~~~~~~~~~~~~
mmdiff.cpp:907:18: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  907 |   for(int f=0; f < samplenames.size(); f++) {
      |                ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:909:10: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  909 |     if(f < samplenames.size()-1) cout << "\t";
      |        ~~^~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:914:30: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  914 |   for(int feature=0; feature < features.size(); feature++) {
      |                      ~~~~~~~~^~~~~~~~~~~~~~~~~
mmdiff.cpp:926:24: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const long long unsigned int'} [-Wsign-compare]
  926 |         for(int l=0; l < M.n_cols; l++) {
      |                      ~~^~~~~~~~~~
mmdiff.cpp:936:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  936 |     for(int f=0; f < samplenames.size(); f++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:939:20: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  939 |     for(int f=0; f < samplenames.size(); f++) {
      |                  ~~^~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:941:12: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  941 |       if(f < samplenames.size()-1) cout << "\t";
      |          ~~^~~~~~~~~~~~~~~~~~~~~~
mmdiff.cpp:951:34: warning: comparison of integer expressions of different signedness: 'int' and 'std::vector<std::__cxx11::basic_string<char>, std::allocator<std::__cxx11::basic_string<char> > >::size_type' {aka 'long unsigned int'} [-Wsign-compare]
  951 |       for(int feature=0; feature < features.size(); feature++) {
      |                          ~~~~~~~~^~~~~~~~~~~~~~~~~
/usr/bin/ld: /tmp/ccAwhh3G.ltrans1.ltrans.o: in function `main':
/builddir/build/BUILD/mmseq-1.0.11/src/bam2hits.cpp:653: warning: the use of `tmpnam' is dangerous, better use `mkstemp'
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.5CHR1r
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64
++ dirname /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/mmseq-1.0.11/.package_note-mmseq-1.0.11-5.fc38.aarch64.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd mmseq-1.0.11
+ rm -rf /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64
+ mkdir -p /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/bam2hits /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/extract_transcripts /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/hitstools /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/mmcollapse /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/mmdiff /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/mmseq /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/offsetGTF /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/t2g_hits /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/fastagrep.sh bin/mouse_strain_transcriptome.sh bin/usage.sh /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/filterGTF.rb bin/haploref.rb bin/testregexp.rb /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ install -p -m 0755 bin/ensembl_gtf_to_gff.pl /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 1.0.11-5.fc38 --unique-debug-suffix -1.0.11-5.fc38.aarch64 --unique-debug-src-base mmseq-1.0.11-5.fc38.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/mmseq-1.0.11
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/hitstools
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/bam2hits
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/mmcollapse
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/extract_transcripts
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/mmdiff
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/mmseq
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/offsetGTF
extracting debug info from /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/bin/t2g_hits
original debug info size: 22060kB, size after compression: 17912kB
/usr/bin/sepdebugcrcfix: Updated 8 CRC32s, 0 CRC32s did match.
542 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/bin/ensembl_gtf_to_gff.pl from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/testregexp.rb from /usr/bin/env ruby to #!/usr/bin/ruby
mangling shebang in /usr/bin/haploref.rb from /usr/bin/env ruby to #!/usr/bin/ruby
mangling shebang in /usr/bin/filterGTF.rb from /usr/bin/env ruby to #!/usr/bin/ruby
mangling shebang in /usr/bin/usage.sh from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/bin/mouse_strain_transcriptome.sh from /bin/sh to #!/usr/bin/sh
mangling shebang in /usr/bin/fastagrep.sh from /bin/bash to #!/usr/bin/bash
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.gllaNY
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/mmseq-1.0.11/.package_note-mmseq-1.0.11-5.fc38.aarch64.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' -f /usr/lib/rpm/generate-rpm-note.sh ']'
+ /usr/lib/rpm/generate-rpm-note.sh mmseq 1.0.11-5.fc38 aarch64
+ cd mmseq-1.0.11
++ bin/mmseq --version
++ true
+ test mmseq-1.0.11 = mmseq-1.0.11
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: mmseq-1.0.11-5.fc38.aarch64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.E6rdmN
+ umask 022
+ cd /builddir/build/BUILD
+ cd mmseq-1.0.11
+ DOCDIR=/builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/share/doc/mmseq
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/share/doc/mmseq
+ cp -pr README.md /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/share/doc/mmseq
+ cp -pr COPYING /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/share/doc/mmseq
+ cp -pr doc/ /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64/usr/share/doc/mmseq
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: mmseq = 1.0.11-5.fc38 mmseq(aarch-64) = 1.0.11-5.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/perl /usr/bin/ruby /usr/bin/sh ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libboost_iostreams.so.1.78.0()(64bit) libboost_regex.so.1.78.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libflexiblas.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgomp.so.1()(64bit) libgomp.so.1(GOMP_1.0)(64bit) libgomp.so.1(GOMP_4.0)(64bit) libgomp.so.1(OMP_1.0)(64bit) libgsl.so.25()(64bit) libgslcblas.so.0()(64bit) libhts.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) perl(strict) rtld(GNU_HASH)
Processing files: mmseq-debugsource-1.0.11-5.fc38.aarch64
Provides: mmseq-debugsource = 1.0.11-5.fc38 mmseq-debugsource(aarch-64) = 1.0.11-5.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: mmseq-debuginfo-1.0.11-5.fc38.aarch64
Provides: debuginfo(build-id) = 109918712df6c154f77578ab9509614b6f42d2a2 debuginfo(build-id) = 21e3cba36197e23eb2e835f86cb2a5b77e0acd69 debuginfo(build-id) = 2c12fb0b8591a1d20f77a757d24b586486fbdd2a debuginfo(build-id) = 782a4dfc682718ea38ef7168393d14e0371dcede debuginfo(build-id) = 792b7738b52a585a00449e41e265ee9bf5386b3b debuginfo(build-id) = a5fefe7494d196eeedd000a0b0e58d715d4270de debuginfo(build-id) = d6dfb6868d8187d1adefa3d9ab35e6997e245094 debuginfo(build-id) = fcbf1d29cd06d4626ab0005de10ec55d683abb2a mmseq-debuginfo = 1.0.11-5.fc38 mmseq-debuginfo(aarch-64) = 1.0.11-5.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: mmseq-debugsource(aarch-64) = 1.0.11-5.fc38
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64
Wrote: /builddir/build/RPMS/mmseq-debugsource-1.0.11-5.fc38.aarch64.rpm
Wrote: /builddir/build/RPMS/mmseq-1.0.11-5.fc38.aarch64.rpm
Wrote: /builddir/build/RPMS/mmseq-debuginfo-1.0.11-5.fc38.aarch64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.ldfJfS
+ umask 022
+ cd /builddir/build/BUILD
+ cd mmseq-1.0.11
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/mmseq-1.0.11-5.fc38.aarch64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.1nby05
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf mmseq-1.0.11 mmseq-1.0.11.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild mmseq-1.0.11-5.fc38.src.rpm
Finish: build phase for mmseq-1.0.11-5.fc38.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-aarch64-1660558476.360431/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/mmseq-1.0.11-5.fc38.src.rpm) Config(child) 2 minutes 46 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool