Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c20a' (ED25519) to the list of known hosts.
Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 4733910 --chroot fedora-rawhide-ppc64le --detached
Version: 0.61
PID: 5717
Logging PID: 5718
Task:
{'appstream': True,
 'background': False,
 'bootstrap': 'off',
 'build_id': 4733910,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-ppc64le',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': '00e9239ef0d1f3ea39c07da84538bfbc7d86f9dd',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/samtools',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'samtools',
 'package_version': '1.15.1-1.fc38',
 'project_dirname': 'staging',
 'project_name': 'staging',
 'project_owner': 'jaruga',
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/jaruga/staging/fedora-rawhide-ppc64le/',
            'id': 'copr_base',
            'name': 'Copr repository'}],
 'sandbox': 'jaruga/staging--jaruga',
 'source_json': {},
 'source_type': None,
 'submitter': 'jaruga',
 'tags': [],
 'task_id': '4733910-fedora-rawhide-ppc64le',
 'timeout': 18000,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/samtools /var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/jaruga/staging/samtools', '/var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools'...

Running: git checkout 00e9239ef0d1f3ea39c07da84538bfbc7d86f9dd

cmd: ['git', 'checkout', '00e9239ef0d1f3ea39c07da84538bfbc7d86f9dd']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools
rc: 0
stdout: 
stderr: Note: switching to '00e9239ef0d1f3ea39c07da84538bfbc7d86f9dd'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at 00e9239 automatic import of samtools

Running: copr-distgit-client sources
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools/samtools.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1660573322.917606 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 3.1 starting (python version = 3.10.4, NVR = mock-3.1-1.fc35)...
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools/samtools.spec)  Config(fedora-rawhide-ppc64le)
Start: clean chroot
Finish: clean chroot
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.1
INFO: Mock Version: 3.1
Start: dnf install
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity

This system is not registered with an entitlement server. You can use subscription-manager to register.

Copr repository                                  61 kB/s |  23 kB     00:00    
fedora                                          7.6 MB/s |  60 MB     00:07    
Dependencies resolved.
================================================================================
 Package                       Arch    Version                     Repo    Size
================================================================================
Installing group/module packages:
 bash                          ppc64le 5.1.16-3.fc37               fedora 1.8 M
 bzip2                         ppc64le 1.0.8-12.fc37               fedora  53 k
 coreutils                     ppc64le 9.1-6.fc37                  fedora 1.4 M
 cpio                          ppc64le 2.13-13.fc37                fedora 283 k
 diffutils                     ppc64le 3.8-3.fc37                  fedora 389 k
 fedora-release-common         noarch  38-0.2                      fedora  22 k
 findutils                     ppc64le 1:4.9.0-2.fc37              fedora 538 k
 gawk                          ppc64le 5.1.1-4.fc37                fedora 1.0 M
 glibc-minimal-langpack        ppc64le 2.36-1.fc37                 fedora  81 k
 grep                          ppc64le 3.7-4.fc37                  fedora 283 k
 gzip                          ppc64le 1.12-2.fc37                 fedora 170 k
 info                          ppc64le 6.8-4.fc37                  fedora 252 k
 patch                         ppc64le 2.7.6-17.fc37               fedora 135 k
 redhat-rpm-config             noarch  227-1.fc37                  fedora  80 k
 rpm-build                     ppc64le 4.18.0-0.beta1.4.fc37       fedora  78 k
 sed                           ppc64le 4.8-11.fc37                 fedora 313 k
 shadow-utils                  ppc64le 2:4.11.1-4.fc37             fedora 1.2 M
 tar                           ppc64le 2:1.34-3.fc36               fedora 915 k
 unzip                         ppc64le 6.0-58.fc37                 fedora 188 k
 util-linux                    ppc64le 2.38.1-1.fc37               fedora 2.4 M
 which                         ppc64le 2.21-35.fc37                fedora  42 k
 xz                            ppc64le 5.2.5-10.fc37               fedora 227 k
Installing dependencies:
 alternatives                  ppc64le 1.19-3.fc37                 fedora  38 k
 ansible-srpm-macros           noarch  1-6.fc37                    fedora 7.5 k
 audit-libs                    ppc64le 3.0.8-3.fc37                fedora 130 k
 authselect                    ppc64le 1.4.0-3.fc37                fedora 146 k
 authselect-libs               ppc64le 1.4.0-3.fc37                fedora 254 k
 basesystem                    noarch  11-14.fc37                  fedora 7.0 k
 binutils                      ppc64le 2.38-24.fc38                fedora 6.2 M
 binutils-gold                 ppc64le 2.38-24.fc38                fedora 1.1 M
 bzip2-libs                    ppc64le 1.0.8-12.fc37               fedora  47 k
 ca-certificates               noarch  2022.2.54-5.fc37            fedora 829 k
 coreutils-common              ppc64le 9.1-6.fc37                  fedora 2.0 M
 cracklib                      ppc64le 2.9.6-28.fc36               fedora  94 k
 crypto-policies               noarch  20220802-1.gita99dfd2.fc37  fedora  86 k
 curl                          ppc64le 7.84.0-2.fc37               fedora 317 k
 cyrus-sasl-lib                ppc64le 2.1.28-7.fc37               fedora 882 k
 debugedit                     ppc64le 5.0-5.fc37                  fedora  80 k
 dwz                           ppc64le 0.14-7.fc37                 fedora 137 k
 ed                            ppc64le 1.18-2.fc37                 fedora  81 k
 efi-srpm-macros               noarch  5-6.fc37                    fedora  22 k
 elfutils                      ppc64le 0.187-6.fc37                fedora 555 k
 elfutils-debuginfod-client    ppc64le 0.187-6.fc37                fedora  40 k
 elfutils-default-yama-scope   noarch  0.187-6.fc37                fedora  17 k
 elfutils-libelf               ppc64le 0.187-6.fc37                fedora 206 k
 elfutils-libs                 ppc64le 0.187-6.fc37                fedora 291 k
 fedora-gpg-keys               noarch  38-0.2                      fedora 125 k
 fedora-release                noarch  38-0.2                      fedora  12 k
 fedora-release-identity-basic noarch  38-0.2                      fedora  12 k
 fedora-repos                  noarch  38-0.2                      fedora  10 k
 fedora-repos-rawhide          noarch  38-0.2                      fedora 9.6 k
 file                          ppc64le 5.42-4.fc37                 fedora  49 k
 file-libs                     ppc64le 5.42-4.fc37                 fedora 688 k
 filesystem                    ppc64le 3.18-2.fc37                 fedora 1.1 M
 fonts-srpm-macros             noarch  1:2.0.5-8.fc37              fedora  26 k
 fpc-srpm-macros               noarch  1.3-6.fc37                  fedora 7.7 k
 gdb-minimal                   ppc64le 12.1-4.fc37                 fedora 3.9 M
 gdbm-libs                     ppc64le 1:1.23-2.fc37               fedora  62 k
 ghc-srpm-macros               noarch  1.5.0-7.fc37                fedora 7.8 k
 glibc                         ppc64le 2.36-1.fc37                 fedora 2.2 M
 glibc-common                  ppc64le 2.36-1.fc37                 fedora 372 k
 glibc-gconv-extra             ppc64le 2.36-1.fc37                 fedora 2.0 M
 gmp                           ppc64le 1:6.2.1-3.fc37              fedora 302 k
 gnat-srpm-macros              noarch  4-16.fc37                   fedora 8.3 k
 go-srpm-macros                noarch  3.1.0-4.fc37                fedora  27 k
 jansson                       ppc64le 2.13.1-5.fc37               fedora  50 k
 kernel-srpm-macros            noarch  1.0-15.fc37                 fedora 9.4 k
 keyutils-libs                 ppc64le 1.6.1-5.fc37                fedora  32 k
 krb5-libs                     ppc64le 1.19.2-11.fc37.1            fedora 814 k
 libacl                        ppc64le 2.3.1-4.fc37                fedora  26 k
 libarchive                    ppc64le 3.6.1-2.fc37                fedora 464 k
 libattr                       ppc64le 2.5.1-5.fc37                fedora  19 k
 libblkid                      ppc64le 2.38.1-1.fc37               fedora 123 k
 libbrotli                     ppc64le 1.0.9-9.fc37                fedora 343 k
 libcap                        ppc64le 2.48-5.fc37                 fedora  72 k
 libcap-ng                     ppc64le 0.8.3-3.fc37                fedora  34 k
 libcom_err                    ppc64le 1.46.5-3.fc37               fedora  26 k
 libcurl                       ppc64le 7.84.0-2.fc37               fedora 337 k
 libdb                         ppc64le 5.3.28-53.fc37              fedora 844 k
 libeconf                      ppc64le 0.4.0-4.fc37                fedora  30 k
 libevent                      ppc64le 2.1.12-7.fc37               fedora 277 k
 libfdisk                      ppc64le 2.38.1-1.fc37               fedora 176 k
 libffi                        ppc64le 3.4.2-9.fc37                fedora  38 k
 libgcc                        ppc64le 12.1.1-4.fc38               fedora 104 k
 libgomp                       ppc64le 12.1.1-4.fc38               fedora 308 k
 libidn2                       ppc64le 2.3.3-2.fc37                fedora 117 k
 libmount                      ppc64le 2.38.1-1.fc37               fedora 154 k
 libnghttp2                    ppc64le 1.48.0-2.fc37               fedora  84 k
 libnsl2                       ppc64le 2.0.0-4.fc37                fedora  32 k
 libpkgconf                    ppc64le 1.8.0-3.fc37                fedora  40 k
 libpsl                        ppc64le 0.21.1-6.fc37               fedora  65 k
 libpwquality                  ppc64le 1.4.4-11.fc37               fedora 119 k
 librtas                       ppc64le 2.0.2-13.fc37               fedora  65 k
 libselinux                    ppc64le 3.4-5.fc37                  fedora  99 k
 libsemanage                   ppc64le 3.4-5.fc37                  fedora 131 k
 libsepol                      ppc64le 3.4-3.fc37                  fedora 356 k
 libsigsegv                    ppc64le 2.14-3.fc37                 fedora  28 k
 libsmartcols                  ppc64le 2.38.1-1.fc37               fedora  70 k
 libssh                        ppc64le 0.9.6-5.fc37                fedora 228 k
 libssh-config                 noarch  0.9.6-5.fc37                fedora 7.8 k
 libstdc++                     ppc64le 12.1.1-4.fc38               fedora 934 k
 libtasn1                      ppc64le 4.18.0-3.fc37               fedora  80 k
 libtirpc                      ppc64le 1.3.3-0.fc37                fedora 108 k
 libunistring                  ppc64le 1.0-2.fc37                  fedora 586 k
 libutempter                   ppc64le 1.2.1-7.fc37                fedora  27 k
 libuuid                       ppc64le 2.38.1-1.fc37               fedora  29 k
 libverto                      ppc64le 0.3.2-4.fc37                fedora  22 k
 libxcrypt                     ppc64le 4.4.28-3.fc38               fedora 130 k
 libxml2                       ppc64le 2.9.14-3.fc37               fedora 829 k
 libzstd                       ppc64le 1.5.2-3.fc37                fedora 316 k
 lua-libs                      ppc64le 5.4.4-4.fc37                fedora 244 k
 lua-srpm-macros               noarch  1-7.fc37                    fedora 8.8 k
 lz4-libs                      ppc64le 1.9.3-5.fc37                fedora  89 k
 mpfr                          ppc64le 4.1.0-10.fc37               fedora 340 k
 ncurses-base                  noarch  6.3-3.20220501.fc37         fedora  86 k
 ncurses-libs                  ppc64le 6.3-3.20220501.fc37         fedora 373 k
 nim-srpm-macros               noarch  3-7.fc37                    fedora 8.4 k
 ocaml-srpm-macros             noarch  7-2.fc37                    fedora  13 k
 openblas-srpm-macros          noarch  2-12.fc37                   fedora 7.5 k
 openldap                      ppc64le 2.6.2-5.fc38                fedora 287 k
 openssl-libs                  ppc64le 1:3.0.5-2.fc37              fedora 2.3 M
 p11-kit                       ppc64le 0.24.1-3.fc37               fedora 376 k
 p11-kit-trust                 ppc64le 0.24.1-3.fc37               fedora 152 k
 package-notes-srpm-macros     noarch  0.4-16.fc37                 fedora  11 k
 pam                           ppc64le 1.5.2-14.fc37               fedora 606 k
 pam-libs                      ppc64le 1.5.2-14.fc37               fedora  65 k
 pcre                          ppc64le 8.45-1.fc37.2               fedora 204 k
 pcre2                         ppc64le 10.40-1.fc37.1              fedora 240 k
 pcre2-syntax                  noarch  10.40-1.fc37.1              fedora 142 k
 perl-srpm-macros              noarch  1-46.fc37                   fedora 8.3 k
 pkgconf                       ppc64le 1.8.0-3.fc37                fedora  43 k
 pkgconf-m4                    noarch  1.8.0-3.fc37                fedora  14 k
 pkgconf-pkg-config            ppc64le 1.8.0-3.fc37                fedora  10 k
 popt                          ppc64le 1.19~rc1-3.fc37             fedora  70 k
 publicsuffix-list-dafsa       noarch  20210518-5.fc37             fedora  58 k
 python-srpm-macros            noarch  3.11-4.fc37                 fedora  25 k
 qt5-srpm-macros               noarch  5.15.5-2.fc37               fedora 8.1 k
 readline                      ppc64le 8.1-7.fc37                  fedora 227 k
 rpm                           ppc64le 4.18.0-0.beta1.4.fc37       fedora 565 k
 rpm-build-libs                ppc64le 4.18.0-0.beta1.4.fc37       fedora 102 k
 rpm-libs                      ppc64le 4.18.0-0.beta1.4.fc37       fedora 364 k
 rpmautospec-rpm-macros        noarch  0.3.0-1.fc37                fedora 8.8 k
 rust-srpm-macros              noarch  22-1.fc37                   fedora 9.5 k
 setup                         noarch  2.14.1-2.fc37               fedora 149 k
 sqlite-libs                   ppc64le 3.39.2-2.fc37               fedora 773 k
 systemd-libs                  ppc64le 251.4-51.fc37               fedora 653 k
 tzdata                        noarch  2022a-4.fc37                fedora 719 k
 util-linux-core               ppc64le 2.38.1-1.fc37               fedora 515 k
 xxhash-libs                   ppc64le 0.8.1-3.fc37                fedora  38 k
 xz-libs                       ppc64le 5.2.5-10.fc37               fedora 104 k
 zip                           ppc64le 3.0-33.fc37                 fedora 267 k
 zlib                          ppc64le 1.2.12-4.fc37               fedora 102 k
 zstd                          ppc64le 1.5.2-3.fc37                fedora 466 k
Installing Groups:
 Buildsystem building group                                                    

Transaction Summary
================================================================================
Install  153 Packages

Total download size: 55 M
Installed size: 322 M
Downloading Packages:
(1/153): ansible-srpm-macros-1-6.fc37.noarch.rp  44 kB/s | 7.5 kB     00:00    
(2/153): alternatives-1.19-3.fc37.ppc64le.rpm   134 kB/s |  38 kB     00:00    
(3/153): audit-libs-3.0.8-3.fc37.ppc64le.rpm    293 kB/s | 130 kB     00:00    
(4/153): authselect-1.4.0-3.fc37.ppc64le.rpm    452 kB/s | 146 kB     00:00    
(5/153): basesystem-11-14.fc37.noarch.rpm        91 kB/s | 7.0 kB     00:00    
(6/153): authselect-libs-1.4.0-3.fc37.ppc64le.r 745 kB/s | 254 kB     00:00    
(7/153): bash-5.1.16-3.fc37.ppc64le.rpm         4.0 MB/s | 1.8 MB     00:00    
(8/153): binutils-gold-2.38-24.fc38.ppc64le.rpm 3.4 MB/s | 1.1 MB     00:00    
(9/153): bzip2-libs-1.0.8-12.fc37.ppc64le.rpm   606 kB/s |  47 kB     00:00    
(10/153): bzip2-1.0.8-12.fc37.ppc64le.rpm       636 kB/s |  53 kB     00:00    
(11/153): binutils-2.38-24.fc38.ppc64le.rpm     9.3 MB/s | 6.2 MB     00:00    
(12/153): ca-certificates-2022.2.54-5.fc37.noar 4.3 MB/s | 829 kB     00:00    
(13/153): coreutils-9.1-6.fc37.ppc64le.rpm      6.6 MB/s | 1.4 MB     00:00    
(14/153): cpio-2.13-13.fc37.ppc64le.rpm         3.0 MB/s | 283 kB     00:00    
(15/153): cracklib-2.9.6-28.fc36.ppc64le.rpm    1.1 MB/s |  94 kB     00:00    
(16/153): coreutils-common-9.1-6.fc37.ppc64le.r  15 MB/s | 2.0 MB     00:00    
(17/153): crypto-policies-20220802-1.gita99dfd2 961 kB/s |  86 kB     00:00    
(18/153): curl-7.84.0-2.fc37.ppc64le.rpm        2.9 MB/s | 317 kB     00:00    
(19/153): cyrus-sasl-lib-2.1.28-7.fc37.ppc64le. 7.9 MB/s | 882 kB     00:00    
(20/153): debugedit-5.0-5.fc37.ppc64le.rpm      732 kB/s |  80 kB     00:00    
(21/153): diffutils-3.8-3.fc37.ppc64le.rpm      2.9 MB/s | 389 kB     00:00    
(22/153): dwz-0.14-7.fc37.ppc64le.rpm           1.3 MB/s | 137 kB     00:00    
(23/153): ed-1.18-2.fc37.ppc64le.rpm            809 kB/s |  81 kB     00:00    
(24/153): efi-srpm-macros-5-6.fc37.noarch.rpm   264 kB/s |  22 kB     00:00    
(25/153): elfutils-0.187-6.fc37.ppc64le.rpm     5.8 MB/s | 555 kB     00:00    
(26/153): elfutils-debuginfod-client-0.187-6.fc 406 kB/s |  40 kB     00:00    
(27/153): elfutils-default-yama-scope-0.187-6.f 188 kB/s |  17 kB     00:00    
(28/153): elfutils-libelf-0.187-6.fc37.ppc64le. 2.6 MB/s | 206 kB     00:00    
(29/153): elfutils-libs-0.187-6.fc37.ppc64le.rp 2.9 MB/s | 291 kB     00:00    
(30/153): fedora-gpg-keys-38-0.2.noarch.rpm     1.5 MB/s | 125 kB     00:00    
(31/153): fedora-release-38-0.2.noarch.rpm      120 kB/s |  12 kB     00:00    
(32/153): fedora-release-identity-basic-38-0.2. 157 kB/s |  12 kB     00:00    
(33/153): fedora-release-common-38-0.2.noarch.r 267 kB/s |  22 kB     00:00    
(34/153): fedora-repos-38-0.2.noarch.rpm        104 kB/s |  10 kB     00:00    
(35/153): fedora-repos-rawhide-38-0.2.noarch.rp 108 kB/s | 9.6 kB     00:00    
(36/153): file-5.42-4.fc37.ppc64le.rpm          459 kB/s |  49 kB     00:00    
(37/153): file-libs-5.42-4.fc37.ppc64le.rpm     5.8 MB/s | 688 kB     00:00    
(38/153): findutils-4.9.0-2.fc37.ppc64le.rpm    4.8 MB/s | 538 kB     00:00    
(39/153): filesystem-3.18-2.fc37.ppc64le.rpm    7.0 MB/s | 1.1 MB     00:00    
(40/153): fonts-srpm-macros-2.0.5-8.fc37.noarch 323 kB/s |  26 kB     00:00    
(41/153): fpc-srpm-macros-1.3-6.fc37.noarch.rpm 101 kB/s | 7.7 kB     00:00    
(42/153): gdbm-libs-1.23-2.fc37.ppc64le.rpm     397 kB/s |  62 kB     00:00    
(43/153): gawk-5.1.1-4.fc37.ppc64le.rpm         4.7 MB/s | 1.0 MB     00:00    
(44/153): gdb-minimal-12.1-4.fc37.ppc64le.rpm    12 MB/s | 3.9 MB     00:00    
(45/153): ghc-srpm-macros-1.5.0-7.fc37.noarch.r  71 kB/s | 7.8 kB     00:00    
(46/153): glibc-common-2.36-1.fc37.ppc64le.rpm  4.0 MB/s | 372 kB     00:00    
(47/153): glibc-gconv-extra-2.36-1.fc37.ppc64le  19 MB/s | 2.0 MB     00:00    
(48/153): glibc-2.36-1.fc37.ppc64le.rpm         9.4 MB/s | 2.2 MB     00:00    
(49/153): glibc-minimal-langpack-2.36-1.fc37.pp 1.0 MB/s |  81 kB     00:00    
(50/153): gmp-6.2.1-3.fc37.ppc64le.rpm          3.8 MB/s | 302 kB     00:00    
(51/153): gnat-srpm-macros-4-16.fc37.noarch.rpm 107 kB/s | 8.3 kB     00:00    
(52/153): go-srpm-macros-3.1.0-4.fc37.noarch.rp 339 kB/s |  27 kB     00:00    
(53/153): grep-3.7-4.fc37.ppc64le.rpm           3.1 MB/s | 283 kB     00:00    
(54/153): gzip-1.12-2.fc37.ppc64le.rpm          1.7 MB/s | 170 kB     00:00    
(55/153): info-6.8-4.fc37.ppc64le.rpm           2.5 MB/s | 252 kB     00:00    
(56/153): jansson-2.13.1-5.fc37.ppc64le.rpm     473 kB/s |  50 kB     00:00    
(57/153): kernel-srpm-macros-1.0-15.fc37.noarch  98 kB/s | 9.4 kB     00:00    
(58/153): keyutils-libs-1.6.1-5.fc37.ppc64le.rp 352 kB/s |  32 kB     00:00    
(59/153): krb5-libs-1.19.2-11.fc37.1.ppc64le.rp 7.4 MB/s | 814 kB     00:00    
(60/153): libacl-2.3.1-4.fc37.ppc64le.rpm       238 kB/s |  26 kB     00:00    
(61/153): libarchive-3.6.1-2.fc37.ppc64le.rpm   4.8 MB/s | 464 kB     00:00    
(62/153): libattr-2.5.1-5.fc37.ppc64le.rpm      236 kB/s |  19 kB     00:00    
(63/153): libblkid-2.38.1-1.fc37.ppc64le.rpm    1.5 MB/s | 123 kB     00:00    
(64/153): libbrotli-1.0.9-9.fc37.ppc64le.rpm    3.8 MB/s | 343 kB     00:00    
(65/153): libcap-2.48-5.fc37.ppc64le.rpm        922 kB/s |  72 kB     00:00    
(66/153): libcap-ng-0.8.3-3.fc37.ppc64le.rpm    438 kB/s |  34 kB     00:00    
(67/153): libcom_err-1.46.5-3.fc37.ppc64le.rpm  328 kB/s |  26 kB     00:00    
(68/153): libcurl-7.84.0-2.fc37.ppc64le.rpm     4.1 MB/s | 337 kB     00:00    
(69/153): libeconf-0.4.0-4.fc37.ppc64le.rpm     390 kB/s |  30 kB     00:00    
(70/153): libdb-5.3.28-53.fc37.ppc64le.rpm      7.4 MB/s | 844 kB     00:00    
(71/153): libevent-2.1.12-7.fc37.ppc64le.rpm    3.1 MB/s | 277 kB     00:00    
(72/153): libfdisk-2.38.1-1.fc37.ppc64le.rpm    2.1 MB/s | 176 kB     00:00    
(73/153): libffi-3.4.2-9.fc37.ppc64le.rpm       470 kB/s |  38 kB     00:00    
(74/153): libgcc-12.1.1-4.fc38.ppc64le.rpm      1.4 MB/s | 104 kB     00:00    
(75/153): libidn2-2.3.3-2.fc37.ppc64le.rpm      1.4 MB/s | 117 kB     00:00    
(76/153): libgomp-12.1.1-4.fc38.ppc64le.rpm     3.5 MB/s | 308 kB     00:00    
(77/153): libmount-2.38.1-1.fc37.ppc64le.rpm    2.0 MB/s | 154 kB     00:00    
(78/153): libnghttp2-1.48.0-2.fc37.ppc64le.rpm  1.1 MB/s |  84 kB     00:00    
(79/153): libnsl2-2.0.0-4.fc37.ppc64le.rpm      415 kB/s |  32 kB     00:00    
(80/153): libpkgconf-1.8.0-3.fc37.ppc64le.rpm   533 kB/s |  40 kB     00:00    
(81/153): libpsl-0.21.1-6.fc37.ppc64le.rpm      704 kB/s |  65 kB     00:00    
(82/153): librtas-2.0.2-13.fc37.ppc64le.rpm     731 kB/s |  65 kB     00:00    
(83/153): libpwquality-1.4.4-11.fc37.ppc64le.rp 1.2 MB/s | 119 kB     00:00    
(84/153): libselinux-3.4-5.fc37.ppc64le.rpm     1.0 MB/s |  99 kB     00:00    
(85/153): libsemanage-3.4-5.fc37.ppc64le.rpm    1.3 MB/s | 131 kB     00:00    
(86/153): libsepol-3.4-3.fc37.ppc64le.rpm       3.6 MB/s | 356 kB     00:00    
(87/153): libsigsegv-2.14-3.fc37.ppc64le.rpm    331 kB/s |  28 kB     00:00    
(88/153): libsmartcols-2.38.1-1.fc37.ppc64le.rp 658 kB/s |  70 kB     00:00    
(89/153): libssh-0.9.6-5.fc37.ppc64le.rpm       2.1 MB/s | 228 kB     00:00    
(90/153): libssh-config-0.9.6-5.fc37.noarch.rpm  73 kB/s | 7.8 kB     00:00    
(91/153): libtasn1-4.18.0-3.fc37.ppc64le.rpm    729 kB/s |  80 kB     00:00    
(92/153): libstdc++-12.1.1-4.fc38.ppc64le.rpm   7.5 MB/s | 934 kB     00:00    
(93/153): libtirpc-1.3.3-0.fc37.ppc64le.rpm     1.1 MB/s | 108 kB     00:00    
(94/153): libutempter-1.2.1-7.fc37.ppc64le.rpm  324 kB/s |  27 kB     00:00    
(95/153): libunistring-1.0-2.fc37.ppc64le.rpm   5.6 MB/s | 586 kB     00:00    
(96/153): libuuid-2.38.1-1.fc37.ppc64le.rpm     364 kB/s |  29 kB     00:00    
(97/153): libverto-0.3.2-4.fc37.ppc64le.rpm     295 kB/s |  22 kB     00:00    
(98/153): libxcrypt-4.4.28-3.fc38.ppc64le.rpm   1.2 MB/s | 130 kB     00:00    
(99/153): libxml2-2.9.14-3.fc37.ppc64le.rpm     8.4 MB/s | 829 kB     00:00    
(100/153): libzstd-1.5.2-3.fc37.ppc64le.rpm     3.7 MB/s | 316 kB     00:00    
(101/153): lua-libs-5.4.4-4.fc37.ppc64le.rpm    2.8 MB/s | 244 kB     00:00    
(102/153): lua-srpm-macros-1-7.fc37.noarch.rpm  115 kB/s | 8.8 kB     00:00    
(103/153): lz4-libs-1.9.3-5.fc37.ppc64le.rpm    1.2 MB/s |  89 kB     00:00    
(104/153): mpfr-4.1.0-10.fc37.ppc64le.rpm       3.6 MB/s | 340 kB     00:00    
(105/153): ncurses-base-6.3-3.20220501.fc37.noa 1.0 MB/s |  86 kB     00:00    
(106/153): ncurses-libs-6.3-3.20220501.fc37.ppc 4.3 MB/s | 373 kB     00:00    
(107/153): nim-srpm-macros-3-7.fc37.noarch.rpm   91 kB/s | 8.4 kB     00:00    
(108/153): ocaml-srpm-macros-7-2.fc37.noarch.rp 169 kB/s |  13 kB     00:00    
(109/153): openblas-srpm-macros-2-12.fc37.noarc  97 kB/s | 7.5 kB     00:00    
(110/153): p11-kit-0.24.1-3.fc37.ppc64le.rpm    3.2 MB/s | 376 kB     00:00    
(111/153): openldap-2.6.2-5.fc38.ppc64le.rpm    2.1 MB/s | 287 kB     00:00    
(112/153): p11-kit-trust-0.24.1-3.fc37.ppc64le. 1.9 MB/s | 152 kB     00:00    
(113/153): openssl-libs-3.0.5-2.fc37.ppc64le.rp  10 MB/s | 2.3 MB     00:00    
(114/153): package-notes-srpm-macros-0.4-16.fc3 120 kB/s |  11 kB     00:00    
(115/153): pam-1.5.2-14.fc37.ppc64le.rpm        5.8 MB/s | 606 kB     00:00    
(116/153): pam-libs-1.5.2-14.fc37.ppc64le.rpm   845 kB/s |  65 kB     00:00    
(117/153): patch-2.7.6-17.fc37.ppc64le.rpm      1.7 MB/s | 135 kB     00:00    
(118/153): pcre-8.45-1.fc37.2.ppc64le.rpm       2.6 MB/s | 204 kB     00:00    
(119/153): pcre2-10.40-1.fc37.1.ppc64le.rpm     1.9 MB/s | 240 kB     00:00    
(120/153): pcre2-syntax-10.40-1.fc37.1.noarch.r 1.1 MB/s | 142 kB     00:00    
(121/153): perl-srpm-macros-1-46.fc37.noarch.rp  90 kB/s | 8.3 kB     00:00    
(122/153): pkgconf-m4-1.8.0-3.fc37.noarch.rpm   144 kB/s |  14 kB     00:00    
(123/153): pkgconf-1.8.0-3.fc37.ppc64le.rpm     406 kB/s |  43 kB     00:00    
(124/153): pkgconf-pkg-config-1.8.0-3.fc37.ppc6 102 kB/s |  10 kB     00:00    
(125/153): publicsuffix-list-dafsa-20210518-5.f 581 kB/s |  58 kB     00:00    
(126/153): popt-1.19~rc1-3.fc37.ppc64le.rpm     680 kB/s |  70 kB     00:00    
(127/153): python-srpm-macros-3.11-4.fc37.noarc 208 kB/s |  25 kB     00:00    
(128/153): qt5-srpm-macros-5.15.5-2.fc37.noarch  92 kB/s | 8.1 kB     00:00    
(129/153): readline-8.1-7.fc37.ppc64le.rpm      2.5 MB/s | 227 kB     00:00    
(130/153): redhat-rpm-config-227-1.fc37.noarch. 892 kB/s |  80 kB     00:00    
(131/153): rpm-build-4.18.0-0.beta1.4.fc37.ppc6 794 kB/s |  78 kB     00:00    
(132/153): rpm-4.18.0-0.beta1.4.fc37.ppc64le.rp 5.1 MB/s | 565 kB     00:00    
(133/153): rpm-build-libs-4.18.0-0.beta1.4.fc37 1.0 MB/s | 102 kB     00:00    
(134/153): rpmautospec-rpm-macros-0.3.0-1.fc37.  80 kB/s | 8.8 kB     00:00    
(135/153): rpm-libs-4.18.0-0.beta1.4.fc37.ppc64 2.9 MB/s | 364 kB     00:00    
(136/153): rust-srpm-macros-22-1.fc37.noarch.rp  98 kB/s | 9.5 kB     00:00    
(137/153): setup-2.14.1-2.fc37.noarch.rpm       1.5 MB/s | 149 kB     00:00    
(138/153): sed-4.8-11.fc37.ppc64le.rpm          2.9 MB/s | 313 kB     00:00    
(139/153): shadow-utils-4.11.1-4.fc37.ppc64le.r  11 MB/s | 1.2 MB     00:00    
(140/153): systemd-libs-251.4-51.fc37.ppc64le.r 4.6 MB/s | 653 kB     00:00    
(141/153): sqlite-libs-3.39.2-2.fc37.ppc64le.rp 5.1 MB/s | 773 kB     00:00    
(142/153): tar-1.34-3.fc36.ppc64le.rpm          7.8 MB/s | 915 kB     00:00    
(143/153): unzip-6.0-58.fc37.ppc64le.rpm        2.1 MB/s | 188 kB     00:00    
(144/153): tzdata-2022a-4.fc37.noarch.rpm       6.7 MB/s | 719 kB     00:00    
(145/153): util-linux-2.38.1-1.fc37.ppc64le.rpm  14 MB/s | 2.4 MB     00:00    
(146/153): which-2.21-35.fc37.ppc64le.rpm       412 kB/s |  42 kB     00:00    
(147/153): util-linux-core-2.38.1-1.fc37.ppc64l 4.2 MB/s | 515 kB     00:00    
(148/153): xxhash-libs-0.8.1-3.fc37.ppc64le.rpm 347 kB/s |  38 kB     00:00    
(149/153): xz-5.2.5-10.fc37.ppc64le.rpm         2.4 MB/s | 227 kB     00:00    
(150/153): xz-libs-5.2.5-10.fc37.ppc64le.rpm    1.0 MB/s | 104 kB     00:00    
(151/153): zlib-1.2.12-4.fc37.ppc64le.rpm       941 kB/s | 102 kB     00:00    
(152/153): zip-3.0-33.fc37.ppc64le.rpm          2.3 MB/s | 267 kB     00:00    
(153/153): zstd-1.5.2-3.fc37.ppc64le.rpm        4.4 MB/s | 466 kB     00:00    
--------------------------------------------------------------------------------
Total                                           9.0 MB/s |  55 MB     00:06     
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0xEB10B464:
 Userid     : "Fedora (38) <fedora-38-primary@fedoraproject.org>"
 Fingerprint: 6A51 BBAB BA3D 5467 B617 1221 809A 8D7C EB10 B464
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary
Key imported successfully
fedora                                          1.6 MB/s | 1.6 kB     00:00    
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-38-primary (0xEB10B464) is already installed
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0x5323552A:
 Userid     : "Fedora (37) <fedora-37-primary@fedoraproject.org>"
 Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Running scriptlet: filesystem-3.18-2.fc37.ppc64le                         1/1 
  Preparing        :                                                        1/1 
  Installing       : libgcc-12.1.1-4.fc38.ppc64le                         1/153 
  Running scriptlet: libgcc-12.1.1-4.fc38.ppc64le                         1/153 
  Installing       : crypto-policies-20220802-1.gita99dfd2.fc37.noarc     2/153 
  Running scriptlet: crypto-policies-20220802-1.gita99dfd2.fc37.noarc     2/153 
  Installing       : fedora-release-identity-basic-38-0.2.noarch          3/153 
  Installing       : tzdata-2022a-4.fc37.noarch                           4/153 
  Installing       : rust-srpm-macros-22-1.fc37.noarch                    5/153 
  Installing       : qt5-srpm-macros-5.15.5-2.fc37.noarch                 6/153 
  Installing       : publicsuffix-list-dafsa-20210518-5.fc37.noarch       7/153 
  Installing       : pkgconf-m4-1.8.0-3.fc37.noarch                       8/153 
  Installing       : perl-srpm-macros-1-46.fc37.noarch                    9/153 
  Installing       : pcre2-syntax-10.40-1.fc37.1.noarch                  10/153 
  Installing       : openblas-srpm-macros-2-12.fc37.noarch               11/153 
  Installing       : ocaml-srpm-macros-7-2.fc37.noarch                   12/153 
  Installing       : nim-srpm-macros-3-7.fc37.noarch                     13/153 
  Installing       : ncurses-base-6.3-3.20220501.fc37.noarch             14/153 
  Installing       : libssh-config-0.9.6-5.fc37.noarch                   15/153 
  Installing       : kernel-srpm-macros-1.0-15.fc37.noarch               16/153 
  Installing       : gnat-srpm-macros-4-16.fc37.noarch                   17/153 
  Installing       : ghc-srpm-macros-1.5.0-7.fc37.noarch                 18/153 
  Installing       : fpc-srpm-macros-1.3-6.fc37.noarch                   19/153 
  Installing       : fedora-gpg-keys-38-0.2.noarch                       20/153 
  Installing       : fedora-release-38-0.2.noarch                        21/153 
  Installing       : fedora-release-common-38-0.2.noarch                 22/153 
  Installing       : fedora-repos-rawhide-38-0.2.noarch                  23/153 
  Installing       : fedora-repos-38-0.2.noarch                          24/153 
  Installing       : setup-2.14.1-2.fc37.noarch                          25/153 
warning: /etc/hosts created as /etc/hosts.rpmnew

  Running scriptlet: setup-2.14.1-2.fc37.noarch                          25/153 
  Installing       : filesystem-3.18-2.fc37.ppc64le                      26/153 
  Installing       : basesystem-11-14.fc37.noarch                        27/153 
  Installing       : glibc-gconv-extra-2.36-1.fc37.ppc64le               28/153 
  Running scriptlet: glibc-gconv-extra-2.36-1.fc37.ppc64le               28/153 
  Installing       : glibc-minimal-langpack-2.36-1.fc37.ppc64le          29/153 
  Installing       : glibc-common-2.36-1.fc37.ppc64le                    30/153 
  Running scriptlet: glibc-2.36-1.fc37.ppc64le                           31/153 
  Installing       : glibc-2.36-1.fc37.ppc64le                           31/153 
  Running scriptlet: glibc-2.36-1.fc37.ppc64le                           31/153 
  Installing       : ncurses-libs-6.3-3.20220501.fc37.ppc64le            32/153 
  Installing       : bash-5.1.16-3.fc37.ppc64le                          33/153 
  Running scriptlet: bash-5.1.16-3.fc37.ppc64le                          33/153 
  Installing       : zlib-1.2.12-4.fc37.ppc64le                          34/153 
  Installing       : xz-libs-5.2.5-10.fc37.ppc64le                       35/153 
  Installing       : bzip2-libs-1.0.8-12.fc37.ppc64le                    36/153 
  Installing       : elfutils-libelf-0.187-6.fc37.ppc64le                37/153 
  Installing       : libstdc++-12.1.1-4.fc38.ppc64le                     38/153 
  Installing       : libuuid-2.38.1-1.fc37.ppc64le                       39/153 
  Installing       : libzstd-1.5.2-3.fc37.ppc64le                        40/153 
  Installing       : popt-1.19~rc1-3.fc37.ppc64le                        41/153 
  Installing       : libblkid-2.38.1-1.fc37.ppc64le                      42/153 
  Installing       : readline-8.1-7.fc37.ppc64le                         43/153 
  Installing       : gmp-1:6.2.1-3.fc37.ppc64le                          44/153 
  Installing       : libattr-2.5.1-5.fc37.ppc64le                        45/153 
  Installing       : libacl-2.3.1-4.fc37.ppc64le                         46/153 
  Installing       : libcap-2.48-5.fc37.ppc64le                          47/153 
  Installing       : libxcrypt-4.4.28-3.fc38.ppc64le                     48/153 
  Installing       : lz4-libs-1.9.3-5.fc37.ppc64le                       49/153 
  Installing       : systemd-libs-251.4-51.fc37.ppc64le                  50/153 
  Installing       : mpfr-4.1.0-10.fc37.ppc64le                          51/153 
  Installing       : dwz-0.14-7.fc37.ppc64le                             52/153 
  Installing       : unzip-6.0-58.fc37.ppc64le                           53/153 
  Installing       : file-libs-5.42-4.fc37.ppc64le                       54/153 
  Installing       : file-5.42-4.fc37.ppc64le                            55/153 
  Installing       : sqlite-libs-3.39.2-2.fc37.ppc64le                   56/153 
  Installing       : alternatives-1.19-3.fc37.ppc64le                    57/153 
  Installing       : libcap-ng-0.8.3-3.fc37.ppc64le                      58/153 
  Installing       : audit-libs-3.0.8-3.fc37.ppc64le                     59/153 
  Installing       : libcom_err-1.46.5-3.fc37.ppc64le                    60/153 
  Installing       : libeconf-0.4.0-4.fc37.ppc64le                       61/153 
  Installing       : pam-libs-1.5.2-14.fc37.ppc64le                      62/153 
  Installing       : libsepol-3.4-3.fc37.ppc64le                         63/153 
  Installing       : libsmartcols-2.38.1-1.fc37.ppc64le                  64/153 
  Installing       : libunistring-1.0-2.fc37.ppc64le                     65/153 
  Installing       : libidn2-2.3.3-2.fc37.ppc64le                        66/153 
  Installing       : lua-libs-5.4.4-4.fc37.ppc64le                       67/153 
  Installing       : libpsl-0.21.1-6.fc37.ppc64le                        68/153 
  Installing       : zip-3.0-33.fc37.ppc64le                             69/153 
  Installing       : zstd-1.5.2-3.fc37.ppc64le                           70/153 
  Installing       : libfdisk-2.38.1-1.fc37.ppc64le                      71/153 
  Installing       : bzip2-1.0.8-12.fc37.ppc64le                         72/153 
  Installing       : libxml2-2.9.14-3.fc37.ppc64le                       73/153 
  Installing       : ed-1.18-2.fc37.ppc64le                              74/153 
  Installing       : elfutils-default-yama-scope-0.187-6.fc37.noarch     75/153 
  Running scriptlet: elfutils-default-yama-scope-0.187-6.fc37.noarch     75/153 
  Installing       : package-notes-srpm-macros-0.4-16.fc37.noarch        76/153 
  Installing       : cpio-2.13-13.fc37.ppc64le                           77/153 
  Installing       : diffutils-3.8-3.fc37.ppc64le                        78/153 
  Installing       : gdbm-libs-1:1.23-2.fc37.ppc64le                     79/153 
  Installing       : cyrus-sasl-lib-2.1.28-7.fc37.ppc64le                80/153 
  Installing       : jansson-2.13.1-5.fc37.ppc64le                       81/153 
  Installing       : keyutils-libs-1.6.1-5.fc37.ppc64le                  82/153 
  Installing       : libbrotli-1.0.9-9.fc37.ppc64le                      83/153 
  Installing       : libdb-5.3.28-53.fc37.ppc64le                        84/153 
  Installing       : libffi-3.4.2-9.fc37.ppc64le                         85/153 
  Installing       : p11-kit-0.24.1-3.fc37.ppc64le                       86/153 
  Installing       : libgomp-12.1.1-4.fc38.ppc64le                       87/153 
  Installing       : libnghttp2-1.48.0-2.fc37.ppc64le                    88/153 
  Installing       : libpkgconf-1.8.0-3.fc37.ppc64le                     89/153 
  Installing       : pkgconf-1.8.0-3.fc37.ppc64le                        90/153 
  Installing       : pkgconf-pkg-config-1.8.0-3.fc37.ppc64le             91/153 
  Installing       : librtas-2.0.2-13.fc37.ppc64le                       92/153 
  Running scriptlet: librtas-2.0.2-13.fc37.ppc64le                       92/153 
  Installing       : libsigsegv-2.14-3.fc37.ppc64le                      93/153 
  Installing       : gawk-5.1.1-4.fc37.ppc64le                           94/153 
  Installing       : libtasn1-4.18.0-3.fc37.ppc64le                      95/153 
  Installing       : p11-kit-trust-0.24.1-3.fc37.ppc64le                 96/153 
  Running scriptlet: p11-kit-trust-0.24.1-3.fc37.ppc64le                 96/153 
  Installing       : libverto-0.3.2-4.fc37.ppc64le                       97/153 
  Installing       : pcre-8.45-1.fc37.2.ppc64le                          98/153 
  Installing       : grep-3.7-4.fc37.ppc64le                             99/153 
  Installing       : xz-5.2.5-10.fc37.ppc64le                           100/153 
  Installing       : pcre2-10.40-1.fc37.1.ppc64le                       101/153 
  Installing       : libselinux-3.4-5.fc37.ppc64le                      102/153 
  Installing       : sed-4.8-11.fc37.ppc64le                            103/153 
  Installing       : findutils-1:4.9.0-2.fc37.ppc64le                   104/153 
  Installing       : libmount-2.38.1-1.fc37.ppc64le                     105/153 
  Installing       : util-linux-core-2.38.1-1.fc37.ppc64le              106/153 
  Installing       : libsemanage-3.4-5.fc37.ppc64le                     107/153 
  Installing       : shadow-utils-2:4.11.1-4.fc37.ppc64le               108/153 
  Running scriptlet: libutempter-1.2.1-7.fc37.ppc64le                   109/153 
  Installing       : libutempter-1.2.1-7.fc37.ppc64le                   109/153 
  Installing       : patch-2.7.6-17.fc37.ppc64le                        110/153 
  Installing       : tar-2:1.34-3.fc36.ppc64le                          111/153 
  Installing       : xxhash-libs-0.8.1-3.fc37.ppc64le                   112/153 
  Installing       : coreutils-common-9.1-6.fc37.ppc64le                113/153 
  Installing       : openssl-libs-1:3.0.5-2.fc37.ppc64le                114/153 
  Installing       : coreutils-9.1-6.fc37.ppc64le                       115/153 
  Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch            116/153 
  Installing       : ca-certificates-2022.2.54-5.fc37.noarch            116/153 
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  Installing       : krb5-libs-1.19.2-11.fc37.1.ppc64le                 117/153 
  Installing       : libtirpc-1.3.3-0.fc37.ppc64le                      118/153 
  Running scriptlet: authselect-libs-1.4.0-3.fc37.ppc64le               119/153 
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  Installing       : gzip-1.12-2.fc37.ppc64le                           120/153 
  Installing       : cracklib-2.9.6-28.fc36.ppc64le                     121/153 
  Installing       : libpwquality-1.4.4-11.fc37.ppc64le                 122/153 
  Installing       : authselect-1.4.0-3.fc37.ppc64le                    123/153 
  Installing       : libnsl2-2.0.0-4.fc37.ppc64le                       124/153 
  Installing       : pam-1.5.2-14.fc37.ppc64le                          125/153 
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  Installing       : libarchive-3.6.1-2.fc37.ppc64le                    127/153 
  Installing       : libevent-2.1.12-7.fc37.ppc64le                     128/153 
  Installing       : openldap-2.6.2-5.fc38.ppc64le                      129/153 
  Installing       : libcurl-7.84.0-2.fc37.ppc64le                      130/153 
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  Installing       : binutils-gold-2.38-24.fc38.ppc64le                 133/153 
  Installing       : binutils-2.38-24.fc38.ppc64le                      134/153 
  Running scriptlet: binutils-2.38-24.fc38.ppc64le                      134/153 
  Installing       : elfutils-0.187-6.fc37.ppc64le                      135/153 
  Installing       : gdb-minimal-12.1-4.fc37.ppc64le                    136/153 
  Installing       : debugedit-5.0-5.fc37.ppc64le                       137/153 
  Installing       : curl-7.84.0-2.fc37.ppc64le                         138/153 
  Running scriptlet: rpm-4.18.0-0.beta1.4.fc37.ppc64le                  139/153 
  Installing       : rpm-4.18.0-0.beta1.4.fc37.ppc64le                  139/153 
  Installing       : rpm-libs-4.18.0-0.beta1.4.fc37.ppc64le             140/153 
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  Installing       : rpmautospec-rpm-macros-0.3.0-1.fc37.noarch         144/153 
  Installing       : ansible-srpm-macros-1-6.fc37.noarch                145/153 
  Installing       : fonts-srpm-macros-1:2.0.5-8.fc37.noarch            146/153 
  Installing       : go-srpm-macros-3.1.0-4.fc37.noarch                 147/153 
  Installing       : python-srpm-macros-3.11-4.fc37.noarch              148/153 
  Installing       : redhat-rpm-config-227-1.fc37.noarch                149/153 
  Installing       : rpm-build-4.18.0-0.beta1.4.fc37.ppc64le            150/153 
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  Installing       : which-2.21-35.fc37.ppc64le                         152/153 
  Installing       : info-6.8-4.fc37.ppc64le                            153/153 
  Running scriptlet: filesystem-3.18-2.fc37.ppc64le                     153/153 
  Running scriptlet: ca-certificates-2022.2.54-5.fc37.noarch            153/153 
  Running scriptlet: authselect-libs-1.4.0-3.fc37.ppc64le               153/153 
  Running scriptlet: rpm-4.18.0-0.beta1.4.fc37.ppc64le                  153/153 
  Running scriptlet: info-6.8-4.fc37.ppc64le                            153/153 
  Verifying        : alternatives-1.19-3.fc37.ppc64le                     1/153 
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  Verifying        : audit-libs-3.0.8-3.fc37.ppc64le                      3/153 
  Verifying        : authselect-1.4.0-3.fc37.ppc64le                      4/153 
  Verifying        : authselect-libs-1.4.0-3.fc37.ppc64le                 5/153 
  Verifying        : basesystem-11-14.fc37.noarch                         6/153 
  Verifying        : bash-5.1.16-3.fc37.ppc64le                           7/153 
  Verifying        : binutils-2.38-24.fc38.ppc64le                        8/153 
  Verifying        : binutils-gold-2.38-24.fc38.ppc64le                   9/153 
  Verifying        : bzip2-1.0.8-12.fc37.ppc64le                         10/153 
  Verifying        : bzip2-libs-1.0.8-12.fc37.ppc64le                    11/153 
  Verifying        : ca-certificates-2022.2.54-5.fc37.noarch             12/153 
  Verifying        : coreutils-9.1-6.fc37.ppc64le                        13/153 
  Verifying        : coreutils-common-9.1-6.fc37.ppc64le                 14/153 
  Verifying        : cpio-2.13-13.fc37.ppc64le                           15/153 
  Verifying        : cracklib-2.9.6-28.fc36.ppc64le                      16/153 
  Verifying        : crypto-policies-20220802-1.gita99dfd2.fc37.noarc    17/153 
  Verifying        : curl-7.84.0-2.fc37.ppc64le                          18/153 
  Verifying        : cyrus-sasl-lib-2.1.28-7.fc37.ppc64le                19/153 
  Verifying        : debugedit-5.0-5.fc37.ppc64le                        20/153 
  Verifying        : diffutils-3.8-3.fc37.ppc64le                        21/153 
  Verifying        : dwz-0.14-7.fc37.ppc64le                             22/153 
  Verifying        : ed-1.18-2.fc37.ppc64le                              23/153 
  Verifying        : efi-srpm-macros-5-6.fc37.noarch                     24/153 
  Verifying        : elfutils-0.187-6.fc37.ppc64le                       25/153 
  Verifying        : elfutils-debuginfod-client-0.187-6.fc37.ppc64le     26/153 
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  Verifying        : elfutils-libelf-0.187-6.fc37.ppc64le                28/153 
  Verifying        : elfutils-libs-0.187-6.fc37.ppc64le                  29/153 
  Verifying        : fedora-gpg-keys-38-0.2.noarch                       30/153 
  Verifying        : fedora-release-38-0.2.noarch                        31/153 
  Verifying        : fedora-release-common-38-0.2.noarch                 32/153 
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  Verifying        : fedora-repos-38-0.2.noarch                          34/153 
  Verifying        : fedora-repos-rawhide-38-0.2.noarch                  35/153 
  Verifying        : file-5.42-4.fc37.ppc64le                            36/153 
  Verifying        : file-libs-5.42-4.fc37.ppc64le                       37/153 
  Verifying        : filesystem-3.18-2.fc37.ppc64le                      38/153 
  Verifying        : findutils-1:4.9.0-2.fc37.ppc64le                    39/153 
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  Verifying        : gawk-5.1.1-4.fc37.ppc64le                           42/153 
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  Verifying        : glibc-2.36-1.fc37.ppc64le                           46/153 
  Verifying        : glibc-common-2.36-1.fc37.ppc64le                    47/153 
  Verifying        : glibc-gconv-extra-2.36-1.fc37.ppc64le               48/153 
  Verifying        : glibc-minimal-langpack-2.36-1.fc37.ppc64le          49/153 
  Verifying        : gmp-1:6.2.1-3.fc37.ppc64le                          50/153 
  Verifying        : gnat-srpm-macros-4-16.fc37.noarch                   51/153 
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  Verifying        : grep-3.7-4.fc37.ppc64le                             53/153 
  Verifying        : gzip-1.12-2.fc37.ppc64le                            54/153 
  Verifying        : info-6.8-4.fc37.ppc64le                             55/153 
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  Verifying        : kernel-srpm-macros-1.0-15.fc37.noarch               57/153 
  Verifying        : keyutils-libs-1.6.1-5.fc37.ppc64le                  58/153 
  Verifying        : krb5-libs-1.19.2-11.fc37.1.ppc64le                  59/153 
  Verifying        : libacl-2.3.1-4.fc37.ppc64le                         60/153 
  Verifying        : libarchive-3.6.1-2.fc37.ppc64le                     61/153 
  Verifying        : libattr-2.5.1-5.fc37.ppc64le                        62/153 
  Verifying        : libblkid-2.38.1-1.fc37.ppc64le                      63/153 
  Verifying        : libbrotli-1.0.9-9.fc37.ppc64le                      64/153 
  Verifying        : libcap-2.48-5.fc37.ppc64le                          65/153 
  Verifying        : libcap-ng-0.8.3-3.fc37.ppc64le                      66/153 
  Verifying        : libcom_err-1.46.5-3.fc37.ppc64le                    67/153 
  Verifying        : libcurl-7.84.0-2.fc37.ppc64le                       68/153 
  Verifying        : libdb-5.3.28-53.fc37.ppc64le                        69/153 
  Verifying        : libeconf-0.4.0-4.fc37.ppc64le                       70/153 
  Verifying        : libevent-2.1.12-7.fc37.ppc64le                      71/153 
  Verifying        : libfdisk-2.38.1-1.fc37.ppc64le                      72/153 
  Verifying        : libffi-3.4.2-9.fc37.ppc64le                         73/153 
  Verifying        : libgcc-12.1.1-4.fc38.ppc64le                        74/153 
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  Verifying        : libpkgconf-1.8.0-3.fc37.ppc64le                     80/153 
  Verifying        : libpsl-0.21.1-6.fc37.ppc64le                        81/153 
  Verifying        : libpwquality-1.4.4-11.fc37.ppc64le                  82/153 
  Verifying        : librtas-2.0.2-13.fc37.ppc64le                       83/153 
  Verifying        : libselinux-3.4-5.fc37.ppc64le                       84/153 
  Verifying        : libsemanage-3.4-5.fc37.ppc64le                      85/153 
  Verifying        : libsepol-3.4-3.fc37.ppc64le                         86/153 
  Verifying        : libsigsegv-2.14-3.fc37.ppc64le                      87/153 
  Verifying        : libsmartcols-2.38.1-1.fc37.ppc64le                  88/153 
  Verifying        : libssh-0.9.6-5.fc37.ppc64le                         89/153 
  Verifying        : libssh-config-0.9.6-5.fc37.noarch                   90/153 
  Verifying        : libstdc++-12.1.1-4.fc38.ppc64le                     91/153 
  Verifying        : libtasn1-4.18.0-3.fc37.ppc64le                      92/153 
  Verifying        : libtirpc-1.3.3-0.fc37.ppc64le                       93/153 
  Verifying        : libunistring-1.0-2.fc37.ppc64le                     94/153 
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  Verifying        : libverto-0.3.2-4.fc37.ppc64le                       97/153 
  Verifying        : libxcrypt-4.4.28-3.fc38.ppc64le                     98/153 
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  Verifying        : nim-srpm-macros-3-7.fc37.noarch                    107/153 
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  Verifying        : openblas-srpm-macros-2-12.fc37.noarch              109/153 
  Verifying        : openldap-2.6.2-5.fc38.ppc64le                      110/153 
  Verifying        : openssl-libs-1:3.0.5-2.fc37.ppc64le                111/153 
  Verifying        : p11-kit-0.24.1-3.fc37.ppc64le                      112/153 
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  Verifying        : package-notes-srpm-macros-0.4-16.fc37.noarch       114/153 
  Verifying        : pam-1.5.2-14.fc37.ppc64le                          115/153 
  Verifying        : pam-libs-1.5.2-14.fc37.ppc64le                     116/153 
  Verifying        : patch-2.7.6-17.fc37.ppc64le                        117/153 
  Verifying        : pcre-8.45-1.fc37.2.ppc64le                         118/153 
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  Verifying        : perl-srpm-macros-1-46.fc37.noarch                  121/153 
  Verifying        : pkgconf-1.8.0-3.fc37.ppc64le                       122/153 
  Verifying        : pkgconf-m4-1.8.0-3.fc37.noarch                     123/153 
  Verifying        : pkgconf-pkg-config-1.8.0-3.fc37.ppc64le            124/153 
  Verifying        : popt-1.19~rc1-3.fc37.ppc64le                       125/153 
  Verifying        : publicsuffix-list-dafsa-20210518-5.fc37.noarch     126/153 
  Verifying        : python-srpm-macros-3.11-4.fc37.noarch              127/153 
  Verifying        : qt5-srpm-macros-5.15.5-2.fc37.noarch               128/153 
  Verifying        : readline-8.1-7.fc37.ppc64le                        129/153 
  Verifying        : redhat-rpm-config-227-1.fc37.noarch                130/153 
  Verifying        : rpm-4.18.0-0.beta1.4.fc37.ppc64le                  131/153 
  Verifying        : rpm-build-4.18.0-0.beta1.4.fc37.ppc64le            132/153 
  Verifying        : rpm-build-libs-4.18.0-0.beta1.4.fc37.ppc64le       133/153 
  Verifying        : rpm-libs-4.18.0-0.beta1.4.fc37.ppc64le             134/153 
  Verifying        : rpmautospec-rpm-macros-0.3.0-1.fc37.noarch         135/153 
  Verifying        : rust-srpm-macros-22-1.fc37.noarch                  136/153 
  Verifying        : sed-4.8-11.fc37.ppc64le                            137/153 
  Verifying        : setup-2.14.1-2.fc37.noarch                         138/153 
  Verifying        : shadow-utils-2:4.11.1-4.fc37.ppc64le               139/153 
  Verifying        : sqlite-libs-3.39.2-2.fc37.ppc64le                  140/153 
  Verifying        : systemd-libs-251.4-51.fc37.ppc64le                 141/153 
  Verifying        : tar-2:1.34-3.fc36.ppc64le                          142/153 
  Verifying        : tzdata-2022a-4.fc37.noarch                         143/153 
  Verifying        : unzip-6.0-58.fc37.ppc64le                          144/153 
  Verifying        : util-linux-2.38.1-1.fc37.ppc64le                   145/153 
  Verifying        : util-linux-core-2.38.1-1.fc37.ppc64le              146/153 
  Verifying        : which-2.21-35.fc37.ppc64le                         147/153 
  Verifying        : xxhash-libs-0.8.1-3.fc37.ppc64le                   148/153 
  Verifying        : xz-5.2.5-10.fc37.ppc64le                           149/153 
  Verifying        : xz-libs-5.2.5-10.fc37.ppc64le                      150/153 
  Verifying        : zip-3.0-33.fc37.ppc64le                            151/153 
  Verifying        : zlib-1.2.12-4.fc37.ppc64le                         152/153 
  Verifying        : zstd-1.5.2-3.fc37.ppc64le                          153/153 
Installed products updated.

Installed:
  alternatives-1.19-3.fc37.ppc64le                                              
  ansible-srpm-macros-1-6.fc37.noarch                                           
  audit-libs-3.0.8-3.fc37.ppc64le                                               
  authselect-1.4.0-3.fc37.ppc64le                                               
  authselect-libs-1.4.0-3.fc37.ppc64le                                          
  basesystem-11-14.fc37.noarch                                                  
  bash-5.1.16-3.fc37.ppc64le                                                    
  binutils-2.38-24.fc38.ppc64le                                                 
  binutils-gold-2.38-24.fc38.ppc64le                                            
  bzip2-1.0.8-12.fc37.ppc64le                                                   
  bzip2-libs-1.0.8-12.fc37.ppc64le                                              
  ca-certificates-2022.2.54-5.fc37.noarch                                       
  coreutils-9.1-6.fc37.ppc64le                                                  
  coreutils-common-9.1-6.fc37.ppc64le                                           
  cpio-2.13-13.fc37.ppc64le                                                     
  cracklib-2.9.6-28.fc36.ppc64le                                                
  crypto-policies-20220802-1.gita99dfd2.fc37.noarch                             
  curl-7.84.0-2.fc37.ppc64le                                                    
  cyrus-sasl-lib-2.1.28-7.fc37.ppc64le                                          
  debugedit-5.0-5.fc37.ppc64le                                                  
  diffutils-3.8-3.fc37.ppc64le                                                  
  dwz-0.14-7.fc37.ppc64le                                                       
  ed-1.18-2.fc37.ppc64le                                                        
  efi-srpm-macros-5-6.fc37.noarch                                               
  elfutils-0.187-6.fc37.ppc64le                                                 
  elfutils-debuginfod-client-0.187-6.fc37.ppc64le                               
  elfutils-default-yama-scope-0.187-6.fc37.noarch                               
  elfutils-libelf-0.187-6.fc37.ppc64le                                          
  elfutils-libs-0.187-6.fc37.ppc64le                                            
  fedora-gpg-keys-38-0.2.noarch                                                 
  fedora-release-38-0.2.noarch                                                  
  fedora-release-common-38-0.2.noarch                                           
  fedora-release-identity-basic-38-0.2.noarch                                   
  fedora-repos-38-0.2.noarch                                                    
  fedora-repos-rawhide-38-0.2.noarch                                            
  file-5.42-4.fc37.ppc64le                                                      
  file-libs-5.42-4.fc37.ppc64le                                                 
  filesystem-3.18-2.fc37.ppc64le                                                
  findutils-1:4.9.0-2.fc37.ppc64le                                              
  fonts-srpm-macros-1:2.0.5-8.fc37.noarch                                       
  fpc-srpm-macros-1.3-6.fc37.noarch                                             
  gawk-5.1.1-4.fc37.ppc64le                                                     
  gdb-minimal-12.1-4.fc37.ppc64le                                               
  gdbm-libs-1:1.23-2.fc37.ppc64le                                               
  ghc-srpm-macros-1.5.0-7.fc37.noarch                                           
  glibc-2.36-1.fc37.ppc64le                                                     
  glibc-common-2.36-1.fc37.ppc64le                                              
  glibc-gconv-extra-2.36-1.fc37.ppc64le                                         
  glibc-minimal-langpack-2.36-1.fc37.ppc64le                                    
  gmp-1:6.2.1-3.fc37.ppc64le                                                    
  gnat-srpm-macros-4-16.fc37.noarch                                             
  go-srpm-macros-3.1.0-4.fc37.noarch                                            
  grep-3.7-4.fc37.ppc64le                                                       
  gzip-1.12-2.fc37.ppc64le                                                      
  info-6.8-4.fc37.ppc64le                                                       
  jansson-2.13.1-5.fc37.ppc64le                                                 
  kernel-srpm-macros-1.0-15.fc37.noarch                                         
  keyutils-libs-1.6.1-5.fc37.ppc64le                                            
  krb5-libs-1.19.2-11.fc37.1.ppc64le                                            
  libacl-2.3.1-4.fc37.ppc64le                                                   
  libarchive-3.6.1-2.fc37.ppc64le                                               
  libattr-2.5.1-5.fc37.ppc64le                                                  
  libblkid-2.38.1-1.fc37.ppc64le                                                
  libbrotli-1.0.9-9.fc37.ppc64le                                                
  libcap-2.48-5.fc37.ppc64le                                                    
  libcap-ng-0.8.3-3.fc37.ppc64le                                                
  libcom_err-1.46.5-3.fc37.ppc64le                                              
  libcurl-7.84.0-2.fc37.ppc64le                                                 
  libdb-5.3.28-53.fc37.ppc64le                                                  
  libeconf-0.4.0-4.fc37.ppc64le                                                 
  libevent-2.1.12-7.fc37.ppc64le                                                
  libfdisk-2.38.1-1.fc37.ppc64le                                                
  libffi-3.4.2-9.fc37.ppc64le                                                   
  libgcc-12.1.1-4.fc38.ppc64le                                                  
  libgomp-12.1.1-4.fc38.ppc64le                                                 
  libidn2-2.3.3-2.fc37.ppc64le                                                  
  libmount-2.38.1-1.fc37.ppc64le                                                
  libnghttp2-1.48.0-2.fc37.ppc64le                                              
  libnsl2-2.0.0-4.fc37.ppc64le                                                  
  libpkgconf-1.8.0-3.fc37.ppc64le                                               
  libpsl-0.21.1-6.fc37.ppc64le                                                  
  libpwquality-1.4.4-11.fc37.ppc64le                                            
  librtas-2.0.2-13.fc37.ppc64le                                                 
  libselinux-3.4-5.fc37.ppc64le                                                 
  libsemanage-3.4-5.fc37.ppc64le                                                
  libsepol-3.4-3.fc37.ppc64le                                                   
  libsigsegv-2.14-3.fc37.ppc64le                                                
  libsmartcols-2.38.1-1.fc37.ppc64le                                            
  libssh-0.9.6-5.fc37.ppc64le                                                   
  libssh-config-0.9.6-5.fc37.noarch                                             
  libstdc++-12.1.1-4.fc38.ppc64le                                               
  libtasn1-4.18.0-3.fc37.ppc64le                                                
  libtirpc-1.3.3-0.fc37.ppc64le                                                 
  libunistring-1.0-2.fc37.ppc64le                                               
  libutempter-1.2.1-7.fc37.ppc64le                                              
  libuuid-2.38.1-1.fc37.ppc64le                                                 
  libverto-0.3.2-4.fc37.ppc64le                                                 
  libxcrypt-4.4.28-3.fc38.ppc64le                                               
  libxml2-2.9.14-3.fc37.ppc64le                                                 
  libzstd-1.5.2-3.fc37.ppc64le                                                  
  lua-libs-5.4.4-4.fc37.ppc64le                                                 
  lua-srpm-macros-1-7.fc37.noarch                                               
  lz4-libs-1.9.3-5.fc37.ppc64le                                                 
  mpfr-4.1.0-10.fc37.ppc64le                                                    
  ncurses-base-6.3-3.20220501.fc37.noarch                                       
  ncurses-libs-6.3-3.20220501.fc37.ppc64le                                      
  nim-srpm-macros-3-7.fc37.noarch                                               
  ocaml-srpm-macros-7-2.fc37.noarch                                             
  openblas-srpm-macros-2-12.fc37.noarch                                         
  openldap-2.6.2-5.fc38.ppc64le                                                 
  openssl-libs-1:3.0.5-2.fc37.ppc64le                                           
  p11-kit-0.24.1-3.fc37.ppc64le                                                 
  p11-kit-trust-0.24.1-3.fc37.ppc64le                                           
  package-notes-srpm-macros-0.4-16.fc37.noarch                                  
  pam-1.5.2-14.fc37.ppc64le                                                     
  pam-libs-1.5.2-14.fc37.ppc64le                                                
  patch-2.7.6-17.fc37.ppc64le                                                   
  pcre-8.45-1.fc37.2.ppc64le                                                    
  pcre2-10.40-1.fc37.1.ppc64le                                                  
  pcre2-syntax-10.40-1.fc37.1.noarch                                            
  perl-srpm-macros-1-46.fc37.noarch                                             
  pkgconf-1.8.0-3.fc37.ppc64le                                                  
  pkgconf-m4-1.8.0-3.fc37.noarch                                                
  pkgconf-pkg-config-1.8.0-3.fc37.ppc64le                                       
  popt-1.19~rc1-3.fc37.ppc64le                                                  
  publicsuffix-list-dafsa-20210518-5.fc37.noarch                                
  python-srpm-macros-3.11-4.fc37.noarch                                         
  qt5-srpm-macros-5.15.5-2.fc37.noarch                                          
  readline-8.1-7.fc37.ppc64le                                                   
  redhat-rpm-config-227-1.fc37.noarch                                           
  rpm-4.18.0-0.beta1.4.fc37.ppc64le                                             
  rpm-build-4.18.0-0.beta1.4.fc37.ppc64le                                       
  rpm-build-libs-4.18.0-0.beta1.4.fc37.ppc64le                                  
  rpm-libs-4.18.0-0.beta1.4.fc37.ppc64le                                        
  rpmautospec-rpm-macros-0.3.0-1.fc37.noarch                                    
  rust-srpm-macros-22-1.fc37.noarch                                             
  sed-4.8-11.fc37.ppc64le                                                       
  setup-2.14.1-2.fc37.noarch                                                    
  shadow-utils-2:4.11.1-4.fc37.ppc64le                                          
  sqlite-libs-3.39.2-2.fc37.ppc64le                                             
  systemd-libs-251.4-51.fc37.ppc64le                                            
  tar-2:1.34-3.fc36.ppc64le                                                     
  tzdata-2022a-4.fc37.noarch                                                    
  unzip-6.0-58.fc37.ppc64le                                                     
  util-linux-2.38.1-1.fc37.ppc64le                                              
  util-linux-core-2.38.1-1.fc37.ppc64le                                         
  which-2.21-35.fc37.ppc64le                                                    
  xxhash-libs-0.8.1-3.fc37.ppc64le                                              
  xz-5.2.5-10.fc37.ppc64le                                                      
  xz-libs-5.2.5-10.fc37.ppc64le                                                 
  zip-3.0-33.fc37.ppc64le                                                       
  zlib-1.2.12-4.fc37.ppc64le                                                    
  zstd-1.5.2-3.fc37.ppc64le                                                     

Complete!
Finish: dnf install
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: pcre-8.45-1.fc37.2.ppc64le
gdb-minimal-12.1-4.fc37.ppc64le
libssh-0.9.6-5.fc37.ppc64le
info-6.8-4.fc37.ppc64le
gmp-6.2.1-3.fc37.ppc64le
ocaml-srpm-macros-7-2.fc37.noarch
binutils-gold-2.38-24.fc38.ppc64le
systemd-libs-251.4-51.fc37.ppc64le
p11-kit-0.24.1-3.fc37.ppc64le
libnsl2-2.0.0-4.fc37.ppc64le
elfutils-libs-0.187-6.fc37.ppc64le
zlib-1.2.12-4.fc37.ppc64le
libuuid-2.38.1-1.fc37.ppc64le
fedora-gpg-keys-38-0.2.noarch
audit-libs-3.0.8-3.fc37.ppc64le
file-libs-5.42-4.fc37.ppc64le
keyutils-libs-1.6.1-5.fc37.ppc64le
pkgconf-1.8.0-3.fc37.ppc64le
fonts-srpm-macros-2.0.5-8.fc37.noarch
libzstd-1.5.2-3.fc37.ppc64le
patch-2.7.6-17.fc37.ppc64le
ansible-srpm-macros-1-6.fc37.noarch
bzip2-libs-1.0.8-12.fc37.ppc64le
bzip2-1.0.8-12.fc37.ppc64le
nim-srpm-macros-3-7.fc37.noarch
go-srpm-macros-3.1.0-4.fc37.noarch
fedora-repos-38-0.2.noarch
libxcrypt-4.4.28-3.fc38.ppc64le
gzip-1.12-2.fc37.ppc64le
rpm-build-libs-4.18.0-0.beta1.4.fc37.ppc64le
python-srpm-macros-3.11-4.fc37.noarch
xz-5.2.5-10.fc37.ppc64le
libacl-2.3.1-4.fc37.ppc64le
libeconf-0.4.0-4.fc37.ppc64le
grep-3.7-4.fc37.ppc64le
util-linux-core-2.38.1-1.fc37.ppc64le
elfutils-debuginfod-client-0.187-6.fc37.ppc64le
rpm-build-4.18.0-0.beta1.4.fc37.ppc64le
libutempter-1.2.1-7.fc37.ppc64le
rpmautospec-rpm-macros-0.3.0-1.fc37.noarch
popt-1.19~rc1-3.fc37.ppc64le
ca-certificates-2022.2.54-5.fc37.noarch
rpm-4.18.0-0.beta1.4.fc37.ppc64le
sqlite-libs-3.39.2-2.fc37.ppc64le
libssh-config-0.9.6-5.fc37.noarch
redhat-rpm-config-227-1.fc37.noarch
fpc-srpm-macros-1.3-6.fc37.noarch
lua-libs-5.4.4-4.fc37.ppc64le
jansson-2.13.1-5.fc37.ppc64le
glibc-gconv-extra-2.36-1.fc37.ppc64le
readline-8.1-7.fc37.ppc64le
openssl-libs-3.0.5-2.fc37.ppc64le
libtirpc-1.3.3-0.fc37.ppc64le
fedora-repos-rawhide-38-0.2.noarch
openblas-srpm-macros-2-12.fc37.noarch
curl-7.84.0-2.fc37.ppc64le
libsemanage-3.4-5.fc37.ppc64le
pam-1.5.2-14.fc37.ppc64le
dwz-0.14-7.fc37.ppc64le
xz-libs-5.2.5-10.fc37.ppc64le
ghc-srpm-macros-1.5.0-7.fc37.noarch
authselect-1.4.0-3.fc37.ppc64le
gnat-srpm-macros-4-16.fc37.noarch
libsigsegv-2.14-3.fc37.ppc64le
libidn2-2.3.3-2.fc37.ppc64le
libcurl-7.84.0-2.fc37.ppc64le
efi-srpm-macros-5-6.fc37.noarch
lua-srpm-macros-1-7.fc37.noarch
coreutils-common-9.1-6.fc37.ppc64le
zip-3.0-33.fc37.ppc64le
pcre2-10.40-1.fc37.1.ppc64le
libstdc++-12.1.1-4.fc38.ppc64le
gdbm-libs-1.23-2.fc37.ppc64le
tar-1.34-3.fc36.ppc64le
libsmartcols-2.38.1-1.fc37.ppc64le
sed-4.8-11.fc37.ppc64le
rust-srpm-macros-22-1.fc37.noarch
openldap-2.6.2-5.fc38.ppc64le
fedora-release-common-38-0.2.noarch
glibc-common-2.36-1.fc37.ppc64le
pam-libs-1.5.2-14.fc37.ppc64le
authselect-libs-1.4.0-3.fc37.ppc64le
perl-srpm-macros-1-46.fc37.noarch
libmount-2.38.1-1.fc37.ppc64le
libpwquality-1.4.4-11.fc37.ppc64le
libcap-2.48-5.fc37.ppc64le
elfutils-libelf-0.187-6.fc37.ppc64le
pcre2-syntax-10.40-1.fc37.1.noarch
ncurses-base-6.3-3.20220501.fc37.noarch
libevent-2.1.12-7.fc37.ppc64le
filesystem-3.18-2.fc37.ppc64le
lz4-libs-1.9.3-5.fc37.ppc64le
crypto-policies-20220802-1.gita99dfd2.fc37.noarch
which-2.21-35.fc37.ppc64le
zstd-1.5.2-3.fc37.ppc64le
package-notes-srpm-macros-0.4-16.fc37.noarch
unzip-6.0-58.fc37.ppc64le
cyrus-sasl-lib-2.1.28-7.fc37.ppc64le
elfutils-0.187-6.fc37.ppc64le
pkgconf-m4-1.8.0-3.fc37.noarch
coreutils-9.1-6.fc37.ppc64le
alternatives-1.19-3.fc37.ppc64le
libarchive-3.6.1-2.fc37.ppc64le
util-linux-2.38.1-1.fc37.ppc64le
libverto-0.3.2-4.fc37.ppc64le
libblkid-2.38.1-1.fc37.ppc64le
qt5-srpm-macros-5.15.5-2.fc37.noarch
setup-2.14.1-2.fc37.noarch
libbrotli-1.0.9-9.fc37.ppc64le
bash-5.1.16-3.fc37.ppc64le
libselinux-3.4-5.fc37.ppc64le
glibc-2.36-1.fc37.ppc64le
librtas-2.0.2-13.fc37.ppc64le
shadow-utils-4.11.1-4.fc37.ppc64le
mpfr-4.1.0-10.fc37.ppc64le
ed-1.18-2.fc37.ppc64le
cracklib-2.9.6-28.fc36.ppc64le
glibc-minimal-langpack-2.36-1.fc37.ppc64le
xxhash-libs-0.8.1-3.fc37.ppc64le
libattr-2.5.1-5.fc37.ppc64le
gpg-pubkey-eb10b464-6202d9c6
elfutils-default-yama-scope-0.187-6.fc37.noarch
libdb-5.3.28-53.fc37.ppc64le
gpg-pubkey-5323552a-6112bcdc
kernel-srpm-macros-1.0-15.fc37.noarch
fedora-release-identity-basic-38-0.2.noarch
libfdisk-2.38.1-1.fc37.ppc64le
cpio-2.13-13.fc37.ppc64le
rpm-libs-4.18.0-0.beta1.4.fc37.ppc64le
findutils-4.9.0-2.fc37.ppc64le
ncurses-libs-6.3-3.20220501.fc37.ppc64le
debugedit-5.0-5.fc37.ppc64le
libpsl-0.21.1-6.fc37.ppc64le
fedora-release-38-0.2.noarch
libunistring-1.0-2.fc37.ppc64le
libpkgconf-1.8.0-3.fc37.ppc64le
libcap-ng-0.8.3-3.fc37.ppc64le
gawk-5.1.1-4.fc37.ppc64le
libtasn1-4.18.0-3.fc37.ppc64le
libffi-3.4.2-9.fc37.ppc64le
basesystem-11-14.fc37.noarch
libcom_err-1.46.5-3.fc37.ppc64le
libxml2-2.9.14-3.fc37.ppc64le
libsepol-3.4-3.fc37.ppc64le
pkgconf-pkg-config-1.8.0-3.fc37.ppc64le
p11-kit-trust-0.24.1-3.fc37.ppc64le
binutils-2.38-24.fc38.ppc64le
libgomp-12.1.1-4.fc38.ppc64le
diffutils-3.8-3.fc37.ppc64le
file-5.42-4.fc37.ppc64le
publicsuffix-list-dafsa-20210518-5.fc37.noarch
tzdata-2022a-4.fc37.noarch
libnghttp2-1.48.0-2.fc37.ppc64le
libgcc-12.1.1-4.fc38.ppc64le
krb5-libs-1.19.2-11.fc37.1.ppc64le
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1660521600
Wrote: /builddir/build/SRPMS/samtools-1.15.1-1.fc38.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-44xgz74l/samtools/samtools.spec) Config(child) 1 minutes 32 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/samtools-1.15.1-1.fc38.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1660573322.917606 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 3.1 starting (python version = 3.10.4, NVR = mock-3.1-1.fc35)...
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/results/samtools-1.15.1-1.fc38.src.rpm)  Config(fedora-rawhide-ppc64le)
Start: clean chroot
Finish: clean chroot
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Mock Version: 3.1
INFO: Mock Version: 3.1
Start: dnf update
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity

This system is not registered with an entitlement server. You can use subscription-manager to register.

Copr repository                                  19 kB/s | 3.3 kB     00:00    
fedora                                           64 kB/s | 6.0 kB     00:00    
fedora                                          378 kB/s | 1.7 MB     00:04    
Dependencies resolved.
Nothing to do.
Complete!
Finish: dnf update
Finish: chroot init
Start: build phase for samtools-1.15.1-1.fc38.src.rpm
Start: build setup for samtools-1.15.1-1.fc38.src.rpm
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1660521600
Wrote: /builddir/build/SRPMS/samtools-1.15.1-1.fc38.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Updating Subscription Management repositories.
Unable to read consumer identity

This system is not registered with an entitlement server. You can use subscription-manager to register.

Copr repository                                  29 kB/s | 3.3 kB     00:00    
fedora                                           52 kB/s | 6.0 kB     00:00    
fedora                                          758 kB/s | 1.7 MB     00:02    
Dependencies resolved.
================================================================================
 Package                  Arch      Version                   Repository   Size
================================================================================
Installing:
 gcc                      ppc64le   12.1.1-4.fc38             fedora       29 M
 htslib-devel             ppc64le   1.15.1-1.fc38             copr_base   100 k
 htslib-tools             ppc64le   1.15.1-1.fc38             copr_base   611 k
 make                     ppc64le   1:4.3-11.fc37             fedora      554 k
 ncurses-devel            ppc64le   6.3-3.20220501.fc37       fedora      547 k
 perl-FindBin             noarch    1.53-491.fc37             fedora       18 k
 perl-Getopt-Long         noarch    1:2.52-489.fc37           fedora       60 k
 perl-interpreter         ppc64le   4:5.36.0-491.fc37         fedora       77 k
 perl-lib                 ppc64le   0.65-491.fc37             fedora       19 k
 zlib-devel               ppc64le   1.2.12-4.fc37             fedora       44 k
Installing dependencies:
 annobin-docs             noarch    10.81-1.fc38              fedora       91 k
 annobin-plugin-gcc       ppc64le   10.81-1.fc38              fedora      885 k
 cpp                      ppc64le   12.1.1-4.fc38             fedora      9.4 M
 gc                       ppc64le   8.0.6-4.fc37              fedora      113 k
 gcc-plugin-annobin       ppc64le   12.1.1-4.fc38             fedora       53 k
 glibc-devel              ppc64le   2.36-1.fc37               fedora      594 k
 groff-base               ppc64le   1.22.4-10.fc37            fedora      1.1 M
 guile22                  ppc64le   2.2.7-6.fc37              fedora      6.6 M
 htslib                   ppc64le   1.15.1-1.fc38             copr_base   559 k
 kernel-headers           ppc64le   5.19.0-1.fc37             fedora      1.5 M
 libasan                  ppc64le   12.1.1-4.fc38             fedora      459 k
 libatomic                ppc64le   12.1.1-4.fc38             fedora       40 k
 libmpc                   ppc64le   1.2.1-5.fc37              fedora       85 k
 libtool-ltdl             ppc64le   2.4.7-2.fc37              fedora       41 k
 libubsan                 ppc64le   12.1.1-4.fc38             fedora      232 k
 libxcrypt-devel          ppc64le   4.4.28-3.fc38             fedora       28 k
 ncurses                  ppc64le   6.3-3.20220501.fc37       fedora      418 k
 ncurses-c++-libs         ppc64le   6.3-3.20220501.fc37       fedora       39 k
 perl-Carp                noarch    1.52-489.fc37             fedora       29 k
 perl-Class-Struct        noarch    0.66-491.fc37             fedora       26 k
 perl-DynaLoader          ppc64le   1.52-491.fc37             fedora       30 k
 perl-Encode              ppc64le   4:3.19-491.fc37           fedora      1.7 M
 perl-Errno               ppc64le   1.36-491.fc37             fedora       19 k
 perl-Exporter            noarch    5.77-489.fc37             fedora       31 k
 perl-Fcntl               ppc64le   1.15-491.fc37             fedora       25 k
 perl-File-Basename       noarch    2.85-491.fc37             fedora       22 k
 perl-File-Path           noarch    2.18-489.fc37             fedora       35 k
 perl-File-Temp           noarch    1:0.231.100-489.fc37      fedora       59 k
 perl-File-stat           noarch    1.12-491.fc37             fedora       22 k
 perl-Getopt-Std          noarch    1.13-491.fc37             fedora       20 k
 perl-HTTP-Tiny           noarch    0.082-1.fc37              fedora       55 k
 perl-IO                  ppc64le   1.50-491.fc37             fedora       97 k
 perl-IPC-Open3           noarch    1.22-491.fc37             fedora       27 k
 perl-MIME-Base64         ppc64le   3.16-489.fc37             fedora       31 k
 perl-POSIX               ppc64le   2.03-491.fc37             fedora      123 k
 perl-PathTools           ppc64le   3.84-489.fc37             fedora       90 k
 perl-Pod-Escapes         noarch    1:1.07-489.fc37           fedora       20 k
 perl-Pod-Perldoc         noarch    3.28.01-490.fc37          fedora       90 k
 perl-Pod-Simple          noarch    1:3.43-490.fc37           fedora      225 k
 perl-Pod-Usage           noarch    4:2.03-3.fc37             fedora       40 k
 perl-Scalar-List-Utils   ppc64le   5:1.63-489.fc38           fedora       76 k
 perl-SelectSaver         noarch    1.02-491.fc37             fedora       16 k
 perl-Socket              ppc64le   4:2.035-2.fc37            fedora       56 k
 perl-Storable            ppc64le   1:3.26-489.fc37           fedora      101 k
 perl-Symbol              noarch    1.09-491.fc37             fedora       19 k
 perl-Term-ANSIColor      noarch    5.01-490.fc37             fedora       48 k
 perl-Term-Cap            noarch    1.17-489.fc37             fedora       22 k
 perl-Text-ParseWords     noarch    3.31-489.fc37             fedora       16 k
 perl-Text-Tabs+Wrap      noarch    2021.0814-489.fc37        fedora       22 k
 perl-Time-Local          noarch    2:1.300-489.fc37          fedora       33 k
 perl-constant            noarch    1.33-490.fc37             fedora       23 k
 perl-if                  noarch    0.61.000-491.fc37         fedora       18 k
 perl-libs                ppc64le   4:5.36.0-491.fc37         fedora      2.3 M
 perl-mro                 ppc64le   1.26-491.fc37             fedora       34 k
 perl-overload            noarch    1.35-491.fc37             fedora       50 k
 perl-overloading         noarch    0.02-491.fc37             fedora       17 k
 perl-parent              noarch    1:0.238-489.fc37          fedora       14 k
 perl-podlators           noarch    1:4.14-489.fc37           fedora      116 k
 perl-subs                noarch    1.04-491.fc37             fedora       16 k
 perl-vars                noarch    1.05-491.fc37             fedora       17 k

Transaction Summary
================================================================================
Install  70 Packages

Total download size: 59 M
Installed size: 210 M
Downloading Packages:
(1/70): htslib-devel-1.15.1-1.fc38.ppc64le.rpm  377 kB/s | 100 kB     00:00    
(2/70): htslib-1.15.1-1.fc38.ppc64le.rpm        1.2 MB/s | 559 kB     00:00    
(3/70): htslib-tools-1.15.1-1.fc38.ppc64le.rpm  958 kB/s | 611 kB     00:00    
(4/70): annobin-docs-10.81-1.fc38.noarch.rpm    184 kB/s |  91 kB     00:00    
(5/70): gc-8.0.6-4.fc37.ppc64le.rpm             512 kB/s | 113 kB     00:00    
(6/70): annobin-plugin-gcc-10.81-1.fc38.ppc64le 1.1 MB/s | 885 kB     00:00    
(7/70): gcc-plugin-annobin-12.1.1-4.fc38.ppc64l 602 kB/s |  53 kB     00:00    
(8/70): glibc-devel-2.36-1.fc37.ppc64le.rpm     3.7 MB/s | 594 kB     00:00    
(9/70): cpp-12.1.1-4.fc38.ppc64le.rpm           6.1 MB/s | 9.4 MB     00:01    
(10/70): guile22-2.2.7-6.fc37.ppc64le.rpm        20 MB/s | 6.6 MB     00:00    
(11/70): kernel-headers-5.19.0-1.fc37.ppc64le.r 9.4 MB/s | 1.5 MB     00:00    
(12/70): groff-base-1.22.4-10.fc37.ppc64le.rpm  873 kB/s | 1.1 MB     00:01    
(13/70): libasan-12.1.1-4.fc38.ppc64le.rpm      4.1 MB/s | 459 kB     00:00    
(14/70): libatomic-12.1.1-4.fc38.ppc64le.rpm    433 kB/s |  40 kB     00:00    
(15/70): libmpc-1.2.1-5.fc37.ppc64le.rpm        952 kB/s |  85 kB     00:00    
(16/70): libtool-ltdl-2.4.7-2.fc37.ppc64le.rpm  382 kB/s |  41 kB     00:00    
(17/70): libubsan-12.1.1-4.fc38.ppc64le.rpm     1.8 MB/s | 232 kB     00:00    
(18/70): libxcrypt-devel-4.4.28-3.fc38.ppc64le. 242 kB/s |  28 kB     00:00    
(19/70): make-4.3-11.fc37.ppc64le.rpm           3.9 MB/s | 554 kB     00:00    
(20/70): gcc-12.1.1-4.fc38.ppc64le.rpm           12 MB/s |  29 MB     00:02    
(21/70): ncurses-c++-libs-6.3-3.20220501.fc37.p 113 kB/s |  39 kB     00:00    
(22/70): ncurses-6.3-3.20220501.fc37.ppc64le.rp 1.0 MB/s | 418 kB     00:00    
(23/70): perl-Carp-1.52-489.fc37.noarch.rpm     344 kB/s |  29 kB     00:00    
(24/70): perl-Class-Struct-0.66-491.fc37.noarch 280 kB/s |  26 kB     00:00    
(25/70): ncurses-devel-6.3-3.20220501.fc37.ppc6 3.4 MB/s | 547 kB     00:00    
(26/70): perl-DynaLoader-1.52-491.fc37.ppc64le. 322 kB/s |  30 kB     00:00    
(27/70): perl-Errno-1.36-491.fc37.ppc64le.rpm   187 kB/s |  19 kB     00:00    
(28/70): perl-Exporter-5.77-489.fc37.noarch.rpm 275 kB/s |  31 kB     00:00    
(29/70): perl-Fcntl-1.15-491.fc37.ppc64le.rpm   258 kB/s |  25 kB     00:00    
(30/70): perl-File-Basename-2.85-491.fc37.noarc 255 kB/s |  22 kB     00:00    
(31/70): perl-File-Path-2.18-489.fc37.noarch.rp 394 kB/s |  35 kB     00:00    
(32/70): perl-File-Temp-0.231.100-489.fc37.noar 737 kB/s |  59 kB     00:00    
(33/70): perl-File-stat-1.12-491.fc37.noarch.rp 243 kB/s |  22 kB     00:00    
(34/70): perl-FindBin-1.53-491.fc37.noarch.rpm  234 kB/s |  18 kB     00:00    
(35/70): perl-Encode-3.19-491.fc37.ppc64le.rpm  3.5 MB/s | 1.7 MB     00:00    
(36/70): perl-Getopt-Std-1.13-491.fc37.noarch.r 227 kB/s |  20 kB     00:00    
(37/70): perl-Getopt-Long-2.52-489.fc37.noarch. 662 kB/s |  60 kB     00:00    
(38/70): perl-HTTP-Tiny-0.082-1.fc37.noarch.rpm 402 kB/s |  55 kB     00:00    
(39/70): perl-IPC-Open3-1.22-491.fc37.noarch.rp 276 kB/s |  27 kB     00:00    
(40/70): perl-IO-1.50-491.fc37.ppc64le.rpm      962 kB/s |  97 kB     00:00    
(41/70): perl-MIME-Base64-3.16-489.fc37.ppc64le 289 kB/s |  31 kB     00:00    
(42/70): perl-PathTools-3.84-489.fc37.ppc64le.r 837 kB/s |  90 kB     00:00    
(43/70): perl-POSIX-2.03-491.fc37.ppc64le.rpm   770 kB/s | 123 kB     00:00    
(44/70): perl-Pod-Escapes-1.07-489.fc37.noarch. 201 kB/s |  20 kB     00:00    
(45/70): perl-Pod-Perldoc-3.28.01-490.fc37.noar 908 kB/s |  90 kB     00:00    
(46/70): perl-Pod-Usage-2.03-3.fc37.noarch.rpm  408 kB/s |  40 kB     00:00    
(47/70): perl-Pod-Simple-3.43-490.fc37.noarch.r 1.5 MB/s | 225 kB     00:00    
(48/70): perl-Scalar-List-Utils-1.63-489.fc38.p 746 kB/s |  76 kB     00:00    
(49/70): perl-SelectSaver-1.02-491.fc37.noarch. 157 kB/s |  16 kB     00:00    
(50/70): perl-Socket-2.035-2.fc37.ppc64le.rpm   567 kB/s |  56 kB     00:00    
(51/70): perl-Storable-3.26-489.fc37.ppc64le.rp 1.0 MB/s | 101 kB     00:00    
(52/70): perl-Symbol-1.09-491.fc37.noarch.rpm   209 kB/s |  19 kB     00:00    
(53/70): perl-Term-Cap-1.17-489.fc37.noarch.rpm 250 kB/s |  22 kB     00:00    
(54/70): perl-Term-ANSIColor-5.01-490.fc37.noar 407 kB/s |  48 kB     00:00    
(55/70): perl-Text-ParseWords-3.31-489.fc37.noa 167 kB/s |  16 kB     00:00    
(56/70): perl-Text-Tabs+Wrap-2021.0814-489.fc37 224 kB/s |  22 kB     00:00    
(57/70): perl-Time-Local-1.300-489.fc37.noarch. 309 kB/s |  33 kB     00:00    
(58/70): perl-constant-1.33-490.fc37.noarch.rpm 211 kB/s |  23 kB     00:00    
(59/70): perl-if-0.61.000-491.fc37.noarch.rpm   168 kB/s |  18 kB     00:00    
(60/70): perl-interpreter-5.36.0-491.fc37.ppc64 634 kB/s |  77 kB     00:00    
(61/70): perl-lib-0.65-491.fc37.ppc64le.rpm     176 kB/s |  19 kB     00:00    
(62/70): perl-mro-1.26-491.fc37.ppc64le.rpm     342 kB/s |  34 kB     00:00    
(63/70): perl-overload-1.35-491.fc37.noarch.rpm 511 kB/s |  50 kB     00:00    
(64/70): perl-overloading-0.02-491.fc37.noarch. 194 kB/s |  17 kB     00:00    
(65/70): perl-libs-5.36.0-491.fc37.ppc64le.rpm  7.4 MB/s | 2.3 MB     00:00    
(66/70): perl-parent-0.238-489.fc37.noarch.rpm  137 kB/s |  14 kB     00:00    
(67/70): perl-podlators-4.14-489.fc37.noarch.rp 1.1 MB/s | 116 kB     00:00    
(68/70): perl-subs-1.04-491.fc37.noarch.rpm     168 kB/s |  16 kB     00:00    
(69/70): perl-vars-1.05-491.fc37.noarch.rpm     181 kB/s |  17 kB     00:00    
(70/70): zlib-devel-1.2.12-4.fc37.ppc64le.rpm   465 kB/s |  44 kB     00:00    
--------------------------------------------------------------------------------
Total                                            11 MB/s |  59 MB     00:05     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : libmpc-1.2.1-5.fc37.ppc64le                           1/70 
  Installing       : htslib-1.15.1-1.fc38.ppc64le                          2/70 
  Installing       : cpp-12.1.1-4.fc38.ppc64le                             3/70 
  Installing       : ncurses-c++-libs-6.3-3.20220501.fc37.ppc64le          4/70 
  Installing       : ncurses-6.3-3.20220501.fc37.ppc64le                   5/70 
  Installing       : libubsan-12.1.1-4.fc38.ppc64le                        6/70 
  Installing       : libtool-ltdl-2.4.7-2.fc37.ppc64le                     7/70 
  Installing       : libatomic-12.1.1-4.fc38.ppc64le                       8/70 
  Installing       : libasan-12.1.1-4.fc38.ppc64le                         9/70 
  Installing       : kernel-headers-5.19.0-1.fc37.ppc64le                 10/70 
  Installing       : libxcrypt-devel-4.4.28-3.fc38.ppc64le                11/70 
  Installing       : glibc-devel-2.36-1.fc37.ppc64le                      12/70 
  Running scriptlet: groff-base-1.22.4-10.fc37.ppc64le                    13/70 
  Installing       : groff-base-1.22.4-10.fc37.ppc64le                    13/70 
  Running scriptlet: groff-base-1.22.4-10.fc37.ppc64le                    13/70 
  Installing       : perl-Text-Tabs+Wrap-2021.0814-489.fc37.noarch        14/70 
  Installing       : perl-if-0.61.000-491.fc37.noarch                     15/70 
  Installing       : perl-Time-Local-2:1.300-489.fc37.noarch              16/70 
  Installing       : perl-File-Path-2.18-489.fc37.noarch                  17/70 
  Installing       : perl-Pod-Escapes-1:1.07-489.fc37.noarch              18/70 
  Installing       : perl-Class-Struct-0.66-491.fc37.noarch               19/70 
  Installing       : perl-POSIX-2.03-491.fc37.ppc64le                     20/70 
  Installing       : perl-Term-ANSIColor-5.01-490.fc37.noarch             21/70 
  Installing       : perl-IPC-Open3-1.22-491.fc37.noarch                  22/70 
  Installing       : perl-HTTP-Tiny-0.082-1.fc37.noarch                   23/70 
  Installing       : perl-subs-1.04-491.fc37.noarch                       24/70 
  Installing       : perl-File-Temp-1:0.231.100-489.fc37.noarch           25/70 
  Installing       : perl-Term-Cap-1.17-489.fc37.noarch                   26/70 
  Installing       : perl-Pod-Simple-1:3.43-490.fc37.noarch               27/70 
  Installing       : perl-Socket-4:2.035-2.fc37.ppc64le                   28/70 
  Installing       : perl-SelectSaver-1.02-491.fc37.noarch                29/70 
  Installing       : perl-Symbol-1.09-491.fc37.noarch                     30/70 
  Installing       : perl-File-stat-1.12-491.fc37.noarch                  31/70 
  Installing       : perl-podlators-1:4.14-489.fc37.noarch                32/70 
  Installing       : perl-Pod-Perldoc-3.28.01-490.fc37.noarch             33/70 
  Installing       : perl-Fcntl-1.15-491.fc37.ppc64le                     34/70 
  Installing       : perl-Text-ParseWords-3.31-489.fc37.noarch            35/70 
  Installing       : perl-mro-1.26-491.fc37.ppc64le                       36/70 
  Installing       : perl-IO-1.50-491.fc37.ppc64le                        37/70 
  Installing       : perl-overloading-0.02-491.fc37.noarch                38/70 
  Installing       : perl-Pod-Usage-4:2.03-3.fc37.noarch                  39/70 
  Installing       : perl-Errno-1.36-491.fc37.ppc64le                     40/70 
  Installing       : perl-File-Basename-2.85-491.fc37.noarch              41/70 
  Installing       : perl-Getopt-Std-1.13-491.fc37.noarch                 42/70 
  Installing       : perl-MIME-Base64-3.16-489.fc37.ppc64le               43/70 
  Installing       : perl-Scalar-List-Utils-5:1.63-489.fc38.ppc64le       44/70 
  Installing       : perl-constant-1.33-490.fc37.noarch                   45/70 
  Installing       : perl-Storable-1:3.26-489.fc37.ppc64le                46/70 
  Installing       : perl-overload-1.35-491.fc37.noarch                   47/70 
  Installing       : perl-parent-1:0.238-489.fc37.noarch                  48/70 
  Installing       : perl-vars-1.05-491.fc37.noarch                       49/70 
  Installing       : perl-Getopt-Long-1:2.52-489.fc37.noarch              50/70 
  Installing       : perl-Carp-1.52-489.fc37.noarch                       51/70 
  Installing       : perl-Exporter-5.77-489.fc37.noarch                   52/70 
  Installing       : perl-PathTools-3.84-489.fc37.ppc64le                 53/70 
  Installing       : perl-DynaLoader-1.52-491.fc37.ppc64le                54/70 
  Installing       : perl-Encode-4:3.19-491.fc37.ppc64le                  55/70 
  Installing       : perl-libs-4:5.36.0-491.fc37.ppc64le                  56/70 
  Installing       : perl-interpreter-4:5.36.0-491.fc37.ppc64le           57/70 
  Installing       : gc-8.0.6-4.fc37.ppc64le                              58/70 
  Installing       : guile22-2.2.7-6.fc37.ppc64le                         59/70 
  Installing       : make-1:4.3-11.fc37.ppc64le                           60/70 
  Installing       : gcc-12.1.1-4.fc38.ppc64le                            61/70 
  Running scriptlet: gcc-12.1.1-4.fc38.ppc64le                            61/70 
  Installing       : annobin-docs-10.81-1.fc38.noarch                     62/70 
  Installing       : annobin-plugin-gcc-10.81-1.fc38.ppc64le              63/70 
  Running scriptlet: annobin-plugin-gcc-10.81-1.fc38.ppc64le              63/70 
  Installing       : gcc-plugin-annobin-12.1.1-4.fc38.ppc64le             64/70 
  Installing       : perl-FindBin-1.53-491.fc37.noarch                    65/70 
  Installing       : perl-lib-0.65-491.fc37.ppc64le                       66/70 
  Installing       : ncurses-devel-6.3-3.20220501.fc37.ppc64le            67/70 
  Installing       : htslib-devel-1.15.1-1.fc38.ppc64le                   68/70 
  Installing       : htslib-tools-1.15.1-1.fc38.ppc64le                   69/70 
  Installing       : zlib-devel-1.2.12-4.fc37.ppc64le                     70/70 
  Running scriptlet: zlib-devel-1.2.12-4.fc37.ppc64le                     70/70 
  Verifying        : htslib-1.15.1-1.fc38.ppc64le                          1/70 
  Verifying        : htslib-devel-1.15.1-1.fc38.ppc64le                    2/70 
  Verifying        : htslib-tools-1.15.1-1.fc38.ppc64le                    3/70 
  Verifying        : annobin-docs-10.81-1.fc38.noarch                      4/70 
  Verifying        : annobin-plugin-gcc-10.81-1.fc38.ppc64le               5/70 
  Verifying        : cpp-12.1.1-4.fc38.ppc64le                             6/70 
  Verifying        : gc-8.0.6-4.fc37.ppc64le                               7/70 
  Verifying        : gcc-12.1.1-4.fc38.ppc64le                             8/70 
  Verifying        : gcc-plugin-annobin-12.1.1-4.fc38.ppc64le              9/70 
  Verifying        : glibc-devel-2.36-1.fc37.ppc64le                      10/70 
  Verifying        : groff-base-1.22.4-10.fc37.ppc64le                    11/70 
  Verifying        : guile22-2.2.7-6.fc37.ppc64le                         12/70 
  Verifying        : kernel-headers-5.19.0-1.fc37.ppc64le                 13/70 
  Verifying        : libasan-12.1.1-4.fc38.ppc64le                        14/70 
  Verifying        : libatomic-12.1.1-4.fc38.ppc64le                      15/70 
  Verifying        : libmpc-1.2.1-5.fc37.ppc64le                          16/70 
  Verifying        : libtool-ltdl-2.4.7-2.fc37.ppc64le                    17/70 
  Verifying        : libubsan-12.1.1-4.fc38.ppc64le                       18/70 
  Verifying        : libxcrypt-devel-4.4.28-3.fc38.ppc64le                19/70 
  Verifying        : make-1:4.3-11.fc37.ppc64le                           20/70 
  Verifying        : ncurses-6.3-3.20220501.fc37.ppc64le                  21/70 
  Verifying        : ncurses-c++-libs-6.3-3.20220501.fc37.ppc64le         22/70 
  Verifying        : ncurses-devel-6.3-3.20220501.fc37.ppc64le            23/70 
  Verifying        : perl-Carp-1.52-489.fc37.noarch                       24/70 
  Verifying        : perl-Class-Struct-0.66-491.fc37.noarch               25/70 
  Verifying        : perl-DynaLoader-1.52-491.fc37.ppc64le                26/70 
  Verifying        : perl-Encode-4:3.19-491.fc37.ppc64le                  27/70 
  Verifying        : perl-Errno-1.36-491.fc37.ppc64le                     28/70 
  Verifying        : perl-Exporter-5.77-489.fc37.noarch                   29/70 
  Verifying        : perl-Fcntl-1.15-491.fc37.ppc64le                     30/70 
  Verifying        : perl-File-Basename-2.85-491.fc37.noarch              31/70 
  Verifying        : perl-File-Path-2.18-489.fc37.noarch                  32/70 
  Verifying        : perl-File-Temp-1:0.231.100-489.fc37.noarch           33/70 
  Verifying        : perl-File-stat-1.12-491.fc37.noarch                  34/70 
  Verifying        : perl-FindBin-1.53-491.fc37.noarch                    35/70 
  Verifying        : perl-Getopt-Long-1:2.52-489.fc37.noarch              36/70 
  Verifying        : perl-Getopt-Std-1.13-491.fc37.noarch                 37/70 
  Verifying        : perl-HTTP-Tiny-0.082-1.fc37.noarch                   38/70 
  Verifying        : perl-IO-1.50-491.fc37.ppc64le                        39/70 
  Verifying        : perl-IPC-Open3-1.22-491.fc37.noarch                  40/70 
  Verifying        : perl-MIME-Base64-3.16-489.fc37.ppc64le               41/70 
  Verifying        : perl-POSIX-2.03-491.fc37.ppc64le                     42/70 
  Verifying        : perl-PathTools-3.84-489.fc37.ppc64le                 43/70 
  Verifying        : perl-Pod-Escapes-1:1.07-489.fc37.noarch              44/70 
  Verifying        : perl-Pod-Perldoc-3.28.01-490.fc37.noarch             45/70 
  Verifying        : perl-Pod-Simple-1:3.43-490.fc37.noarch               46/70 
  Verifying        : perl-Pod-Usage-4:2.03-3.fc37.noarch                  47/70 
  Verifying        : perl-Scalar-List-Utils-5:1.63-489.fc38.ppc64le       48/70 
  Verifying        : perl-SelectSaver-1.02-491.fc37.noarch                49/70 
  Verifying        : perl-Socket-4:2.035-2.fc37.ppc64le                   50/70 
  Verifying        : perl-Storable-1:3.26-489.fc37.ppc64le                51/70 
  Verifying        : perl-Symbol-1.09-491.fc37.noarch                     52/70 
  Verifying        : perl-Term-ANSIColor-5.01-490.fc37.noarch             53/70 
  Verifying        : perl-Term-Cap-1.17-489.fc37.noarch                   54/70 
  Verifying        : perl-Text-ParseWords-3.31-489.fc37.noarch            55/70 
  Verifying        : perl-Text-Tabs+Wrap-2021.0814-489.fc37.noarch        56/70 
  Verifying        : perl-Time-Local-2:1.300-489.fc37.noarch              57/70 
  Verifying        : perl-constant-1.33-490.fc37.noarch                   58/70 
  Verifying        : perl-if-0.61.000-491.fc37.noarch                     59/70 
  Verifying        : perl-interpreter-4:5.36.0-491.fc37.ppc64le           60/70 
  Verifying        : perl-lib-0.65-491.fc37.ppc64le                       61/70 
  Verifying        : perl-libs-4:5.36.0-491.fc37.ppc64le                  62/70 
  Verifying        : perl-mro-1.26-491.fc37.ppc64le                       63/70 
  Verifying        : perl-overload-1.35-491.fc37.noarch                   64/70 
  Verifying        : perl-overloading-0.02-491.fc37.noarch                65/70 
  Verifying        : perl-parent-1:0.238-489.fc37.noarch                  66/70 
  Verifying        : perl-podlators-1:4.14-489.fc37.noarch                67/70 
  Verifying        : perl-subs-1.04-491.fc37.noarch                       68/70 
  Verifying        : perl-vars-1.05-491.fc37.noarch                       69/70 
  Verifying        : zlib-devel-1.2.12-4.fc37.ppc64le                     70/70 
Installed products updated.

Installed:
  annobin-docs-10.81-1.fc38.noarch                                              
  annobin-plugin-gcc-10.81-1.fc38.ppc64le                                       
  cpp-12.1.1-4.fc38.ppc64le                                                     
  gc-8.0.6-4.fc37.ppc64le                                                       
  gcc-12.1.1-4.fc38.ppc64le                                                     
  gcc-plugin-annobin-12.1.1-4.fc38.ppc64le                                      
  glibc-devel-2.36-1.fc37.ppc64le                                               
  groff-base-1.22.4-10.fc37.ppc64le                                             
  guile22-2.2.7-6.fc37.ppc64le                                                  
  htslib-1.15.1-1.fc38.ppc64le                                                  
  htslib-devel-1.15.1-1.fc38.ppc64le                                            
  htslib-tools-1.15.1-1.fc38.ppc64le                                            
  kernel-headers-5.19.0-1.fc37.ppc64le                                          
  libasan-12.1.1-4.fc38.ppc64le                                                 
  libatomic-12.1.1-4.fc38.ppc64le                                               
  libmpc-1.2.1-5.fc37.ppc64le                                                   
  libtool-ltdl-2.4.7-2.fc37.ppc64le                                             
  libubsan-12.1.1-4.fc38.ppc64le                                                
  libxcrypt-devel-4.4.28-3.fc38.ppc64le                                         
  make-1:4.3-11.fc37.ppc64le                                                    
  ncurses-6.3-3.20220501.fc37.ppc64le                                           
  ncurses-c++-libs-6.3-3.20220501.fc37.ppc64le                                  
  ncurses-devel-6.3-3.20220501.fc37.ppc64le                                     
  perl-Carp-1.52-489.fc37.noarch                                                
  perl-Class-Struct-0.66-491.fc37.noarch                                        
  perl-DynaLoader-1.52-491.fc37.ppc64le                                         
  perl-Encode-4:3.19-491.fc37.ppc64le                                           
  perl-Errno-1.36-491.fc37.ppc64le                                              
  perl-Exporter-5.77-489.fc37.noarch                                            
  perl-Fcntl-1.15-491.fc37.ppc64le                                              
  perl-File-Basename-2.85-491.fc37.noarch                                       
  perl-File-Path-2.18-489.fc37.noarch                                           
  perl-File-Temp-1:0.231.100-489.fc37.noarch                                    
  perl-File-stat-1.12-491.fc37.noarch                                           
  perl-FindBin-1.53-491.fc37.noarch                                             
  perl-Getopt-Long-1:2.52-489.fc37.noarch                                       
  perl-Getopt-Std-1.13-491.fc37.noarch                                          
  perl-HTTP-Tiny-0.082-1.fc37.noarch                                            
  perl-IO-1.50-491.fc37.ppc64le                                                 
  perl-IPC-Open3-1.22-491.fc37.noarch                                           
  perl-MIME-Base64-3.16-489.fc37.ppc64le                                        
  perl-POSIX-2.03-491.fc37.ppc64le                                              
  perl-PathTools-3.84-489.fc37.ppc64le                                          
  perl-Pod-Escapes-1:1.07-489.fc37.noarch                                       
  perl-Pod-Perldoc-3.28.01-490.fc37.noarch                                      
  perl-Pod-Simple-1:3.43-490.fc37.noarch                                        
  perl-Pod-Usage-4:2.03-3.fc37.noarch                                           
  perl-Scalar-List-Utils-5:1.63-489.fc38.ppc64le                                
  perl-SelectSaver-1.02-491.fc37.noarch                                         
  perl-Socket-4:2.035-2.fc37.ppc64le                                            
  perl-Storable-1:3.26-489.fc37.ppc64le                                         
  perl-Symbol-1.09-491.fc37.noarch                                              
  perl-Term-ANSIColor-5.01-490.fc37.noarch                                      
  perl-Term-Cap-1.17-489.fc37.noarch                                            
  perl-Text-ParseWords-3.31-489.fc37.noarch                                     
  perl-Text-Tabs+Wrap-2021.0814-489.fc37.noarch                                 
  perl-Time-Local-2:1.300-489.fc37.noarch                                       
  perl-constant-1.33-490.fc37.noarch                                            
  perl-if-0.61.000-491.fc37.noarch                                              
  perl-interpreter-4:5.36.0-491.fc37.ppc64le                                    
  perl-lib-0.65-491.fc37.ppc64le                                                
  perl-libs-4:5.36.0-491.fc37.ppc64le                                           
  perl-mro-1.26-491.fc37.ppc64le                                                
  perl-overload-1.35-491.fc37.noarch                                            
  perl-overloading-0.02-491.fc37.noarch                                         
  perl-parent-1:0.238-489.fc37.noarch                                           
  perl-podlators-1:4.14-489.fc37.noarch                                         
  perl-subs-1.04-491.fc37.noarch                                                
  perl-vars-1.05-491.fc37.noarch                                                
  zlib-devel-1.2.12-4.fc37.ppc64le                                              

Complete!
Finish: build setup for samtools-1.15.1-1.fc38.src.rpm
Start: rpmbuild samtools-1.15.1-1.fc38.src.rpm
Building target platforms: ppc64le
Building for target ppc64le
setting SOURCE_DATE_EPOCH=1660521600
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.xGXjVz
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf samtools-1.15.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/samtools-1.15.1.tar.bz2
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd samtools-1.15.1
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ rm -f INSTALL
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.fLPjaj
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' -f /usr/lib/rpm/generate-rpm-note.sh ']'
+ /usr/lib/rpm/generate-rpm-note.sh samtools 1.15.1-1.fc38 ppc64le
+ cd samtools-1.15.1
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' '-flto=auto -ffat-lto-objectsx' '!=' x ']'
++ find . -type f -name configure -print
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
--- ./htslib-1.15.1/configure.backup	2022-04-07 15:42:52.000000000 +0000
+++ ./htslib-1.15.1/configure	2022-08-15 14:24:32.907990489 +0000
@@ -1697,7 +1697,7 @@
 #ifdef __cplusplus
 extern "C"
 #endif
-char $2 ();
+__attribute__ ((used)) char $2 ();
 /* The GNU C library defines this for functions which it implements
     to always fail with ENOSYS.  Some functions are actually named
     something starting with __ and the normal name is an alias.  */
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./htslib-1.15.1/configure
+ diff -u ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ mv ./htslib-1.15.1/configure.backup ./htslib-1.15.1/configure
+ for file in $(find . -type f -name configure -print)
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\) = /__attribute__ ((used)) char (*f) () = /g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \(\*f\) \(\);/__attribute__ ((used)) char (*f) ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed -r --in-place=.backup 's/^char \$2 \(\);/__attribute__ ((used)) char \$2 ();/g' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup '1{$!N;$!N};$!N;s/int x = 1;\nint y = 0;\nint z;\nint nan;/volatile int x = 1; volatile int y = 0; volatile int z, nan;/;P;D' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ /usr/bin/sed --in-place=.backup 's#^lt_cv_sys_global_symbol_to_cdecl=.*#lt_cv_sys_global_symbol_to_cdecl="sed -n -e '\''s/^T .* \\(.*\\)$/extern int \\1();/p'\'' -e '\''s/^$symcode* .* \\(.*\\)$/extern char \\1;/p'\''"#' ./configure
+ diff -u ./configure.backup ./configure
+ mv ./configure.backup ./configure
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ ./configure --build=powerpc64le-redhat-linux-gnu --host=powerpc64le-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection' 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld' --prefix=/usr --with-htslib=system
checking for gawk... gawk
checking for powerpc64le-redhat-linux-gnu-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for C compiler warning flags... -Wall
checking for special C compiler options needed for large files... no
checking for _FILE_OFFSET_BITS value needed for large files... no
checking for htslib/sam.h... yes
checking for hts_version in -lhts... yes
checking for NcursesW wide-character library... yes
checking for working ncursesw/curses.h... yes
checking for library containing cbreak... none required
checking for zlib.h... yes
checking for inflate in -lz... yes
checking for library containing regcomp... none required
configure: creating ./config.status
config.status: creating config.mk
config.status: creating config.h
+ /usr/bin/make -O -j2 V=1 VERBOSE=1
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_aux.o bam_aux.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam.o bam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_index.o bam_index.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_plcmd.o bam_plcmd.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sam_view.o sam_view.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_fastq.o bam_fastq.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_cat.o bam_cat.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_plbuf.o bam_plbuf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_md.o bam_md.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_reheader.o bam_reheader.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_rmdup.o bam_rmdup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_rmdupse.o bam_rmdupse.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_mate.o bam_mate.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_stat.o bam_stat.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_color.o bam_color.c
echo '#define SAMTOOLS_VERSION "1.15.1"' > version.h
echo '#define SAMTOOLS_CC "gcc"' >> version.h
echo '#define SAMTOOLS_CPPFLAGS ""' >> version.h
echo '#define SAMTOOLS_CFLAGS "-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection"' >> version.h
echo '#define SAMTOOLS_LDFLAGS "-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld"' >> version.h
echo '#define SAMTOOLS_HTSDIR ""' >> version.h
echo '#define SAMTOOLS_LIBS ""' >> version.h
echo '#define SAMTOOLS_CURSES_LIB "-lncursesw"' >> version.h
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam2bcf.o bam2bcf.c
bam2bcf.c: In function 'bcf_call_glfgen':
bam2bcf.c:81:33: warning: argument 2 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   81 |         bca->bases = (uint16_t*)realloc(bca->bases, 2 * bca->max_bases);
      |                                 ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/htslib/kstring.h:30,
                 from /usr/include/htslib/hts.h:37,
                 from bam2bcf.c:30:
/usr/include/stdlib.h:564:14: note: in a call to allocation function 'realloc' declared here
  564 | extern void *realloc (void *__ptr, size_t __size)
      |              ^~~~~~~
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sample.o sample.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o cut_target.o cut_target.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_sort.o bam_sort.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o phase.o phase.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o coverage.o coverage.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam2depth.o bam2depth.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o padding.o padding.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bedcov.o bedcov.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o faidx.o faidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bamshuf.o bamshuf.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o dict.o dict.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o stats_isize.o stats_isize.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_flags.o bam_flags.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_split.o bam_split.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_tview.o bam_tview.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o stats.o stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_tview_curses.o bam_tview_curses.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_tview_html.o bam_tview_html.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_lpileup.o bam_lpileup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_quickcheck.o bam_quickcheck.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_addrprg.o bam_addrprg.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o tmp_file.o tmp_file.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_ampliconclip.o bam_ampliconclip.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_markdup.o bam_markdup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_import.o bam_import.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_samples.o bam_samples.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o amplicon_stats.o amplicon_stats.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bam_consensus.o bam_consensus.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o consensus_pileup.o consensus_pileup.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sam_opts.o sam_opts.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o sam_utils.o sam_utils.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bedidx.o bedidx.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/ace2sam.o misc/ace2sam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DMAQ_LONGREADS -I.  -I./lz4  -c -o misc/maq2sam-long.o misc/maq2sam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/maq2sam-short.o misc/maq2sam.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/md5fa.o misc/md5fa.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/md5sum-lite.o misc/md5sum-lite.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o lz4/lz4.o lz4/lz4.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o misc/wgsim.o misc/wgsim.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/test.o test/test.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/merge/test_rtrans_build.o test/merge/test_rtrans_build.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/merge/test_bam_translate.o test/merge/test_bam_translate.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_count_rg.o test/split/test_count_rg.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_expand_format_string.o test/split/test_expand_format_string.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_filter_header_rg.o test/split/test_filter_header_rg.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/split/test_parse_args.o test/split/test_parse_args.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/vcf-miniview.o test/vcf-miniview.c
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o bamtk.o bamtk.c
ar -rcs libst.a sam_opts.o sam_utils.o bedidx.o
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o misc/ace2sam misc/ace2sam.o -lhts -lz 
gcc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o misc/maq2sam-long misc/maq2sam-long.o -lz 
gcc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o misc/maq2sam-short misc/maq2sam-short.o -lz 
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I.  -I./lz4  -c -o test/merge/test_trans_tbl_init.o test/merge/test_trans_tbl_init.c
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o misc/md5fa misc/md5fa.o -lhts -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o misc/md5sum-lite misc/md5sum-lite.o -lhts -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o misc/wgsim misc/wgsim.o -lm -lhts -lz 
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/merge/test_bam_translate test/merge/test_bam_translate.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/merge/test_rtrans_build test/merge/test_rtrans_build.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/split/test_count_rg test/split/test_count_rg.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/split/test_expand_format_string test/split/test_expand_format_string.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/split/test_filter_header_rg test/split/test_filter_header_rg.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/merge/test_trans_tbl_init test/merge/test_trans_tbl_init.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/vcf-miniview test/vcf-miniview.o -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o test/split/test_parse_args test/split/test_parse_args.o test/test.o libst.a -lhts -lz  -lpthread
gcc  -L./lz4 -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld -o samtools bam.o bam_aux.o bam_index.o bam_plcmd.o sam_view.o bam_fastq.o bam_cat.o bam_md.o bam_plbuf.o bam_reheader.o bam_sort.o bam_rmdup.o bam_rmdupse.o bam_mate.o bam_stat.o bam_color.o bamtk.o bam2bcf.o sample.o cut_target.o phase.o bam2depth.o coverage.o padding.o bedcov.o bamshuf.o faidx.o dict.o stats.o stats_isize.o bam_flags.o bam_split.o bam_tview.o bam_tview_curses.o bam_tview_html.o bam_lpileup.o bam_quickcheck.o bam_addrprg.o bam_markdup.o tmp_file.o bam_ampliconclip.o amplicon_stats.o bam_import.o bam_samples.o bam_consensus.o consensus_pileup.o ./lz4/lz4.o libst.a -lhts -lncursesw -lm -lz  -lpthread
In function 'bcf_call_glfgen',
    inlined from 'tv_pl_func' at bam_tview.c:196:9:
bam2bcf.c:81:33: warning: argument 2 range [18446744071562067968, 18446744073709551614] exceeds maximum object size 9223372036854775807 [-Walloc-size-larger-than=]
   81 |         bca->bases = (uint16_t*)realloc(bca->bases, 2 * bca->max_bases);
      |                                 ^
/usr/include/stdlib.h: In function 'tv_pl_func':
/usr/include/stdlib.h:564:14: note: in a call to allocation function 'realloc' declared here
  564 | extern void *realloc (void *__ptr, size_t __size)
      |              ^
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.zBqPjh
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le
++ dirname /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd samtools-1.15.1
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le 'INSTALL=/usr/bin/install -p'
mkdir -p -m 755 /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/man/man1
/usr/bin/install -p samtools /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin
/usr/bin/install -p misc/ace2sam misc/maq2sam-long misc/maq2sam-short misc/md5fa misc/md5sum-lite misc/wgsim /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin
/usr/bin/install -p misc/blast2sam.pl misc/bowtie2sam.pl misc/export2sam.pl misc/fasta-sanitize.pl misc/interpolate_sam.pl misc/novo2sam.pl misc/plot-ampliconstats misc/plot-bamstats misc/psl2sam.pl misc/sam2vcf.pl misc/samtools.pl misc/seq_cache_populate.pl misc/soap2sam.pl misc/wgsim_eval.pl misc/zoom2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin
/usr/bin/install -p -m 644 doc/samtools*.1 misc/wgsim.1 /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/man/man1
++ grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/ace2sam /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/blast2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/bowtie2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/export2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/fasta-sanitize.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/interpolate_sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/maq2sam-long /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/maq2sam-short /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/md5fa /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/md5sum-lite /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/novo2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/plot-ampliconstats /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/plot-bamstats /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/psl2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/sam2vcf.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/samtools /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/samtools.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/seq_cache_populate.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/soap2sam.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/wgsim /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/wgsim_eval.pl /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/zoom2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/blast2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/bowtie2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/export2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/fasta-sanitize.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/interpolate_sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/novo2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/plot-ampliconstats
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/plot-bamstats
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/psl2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/sam2vcf.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/samtools.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/seq_cache_populate.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/soap2sam.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/wgsim_eval.pl
+ for file in $(grep -l '^#!/usr/bin/env perl' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/*)
+ sed -i '1 s|/usr/bin/env perl|/usr/bin/perl|' /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/zoom2sam.pl
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.15.1-1.fc38 --unique-debug-suffix -1.15.1-1.fc38.ppc64le --unique-debug-src-base samtools-1.15.1-1.fc38.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/samtools-1.15.1
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/maq2sam-long
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/ace2sam
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/maq2sam-short
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/md5fa
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/md5sum-lite
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/samtools
extracting debug info from /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/bin/wgsim
original debug info size: 2304kB, size after compression: 2176kB
/usr/bin/sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match.
2442 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
+ /usr/lib/rpm/brp-remove-la-files
+ /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0
+ /usr/lib/rpm/redhat/brp-python-hardlink
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.p3KNRB
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/samtools-1.15.1/.package_note-samtools-1.15.1-1.fc38.ppc64le.ld'
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ '[' -f /usr/lib/rpm/generate-rpm-note.sh ']'
+ /usr/lib/rpm/generate-rpm-note.sh samtools 1.15.1-1.fc38 ppc64le
+ cd samtools-1.15.1
+ grep -E '/lib(64)?/libhts\.so\.'
+ ldd samtools
	libhts.so.3 => /lib64/libhts.so.3 (0x00007fff85150000)
+ make test
test/split/test_count_rg
test/split/test_expand_format_string
test/split/test_filter_header_rg
test/split/test_parse_args
REF_PATH=: test/test.pl --exec bgzip= ${TEST_OPTS:-}
bgzip -c -b 65272 -s 5 /tmp/UB_0CjJAjm/bgzip.dat.gz
.. ok

bgzip -c -b 979200 -s 6 /tmp/UB_0CjJAjm/bgzip.dat.gz
.. ok

bgzip -c -b 652804 -s 6 /tmp/UB_0CjJAjm/bgzip.dat.gz
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa 3:11-13 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa.gz 3:11-13 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa 2:998-1003 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa.gz 2:998-1003 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa 1:100-104 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa.gz 1:100-104 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa 1:99998-100007 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools faidx /tmp/UB_0CjJAjm/faidx.fa.gz 1:99998-100007 | grep -v '^>'
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq 3:11-13
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq.gz 3:11-13
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq 2:998-1003
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq.gz 2:998-1003
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq 1:100-104
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq.gz 1:100-104
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq 1:99998-100007
.. ok

.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools fqidx /tmp/UB_0CjJAjm/fqidx.fq.gz 1:99998-100007
.. ok

.. ok

test_dict:
	/builddir/build/BUILD/samtools-1.15.1/samtools dict -a hf37d5 -s 'Homo floresiensis' -u ftp://example.com/hf37d5.fa.gz /builddir/build/BUILD/samtools-1.15.1/test/dat/dict.fa
.. ok

test_dict:
	/builddir/build/BUILD/samtools-1.15.1/samtools dict -a hf37d5 -s 'Homo floresiensis' -u ftp://example.com/hf37d5.fa.gz /tmp/UB_0CjJAjm/dict.fa.gz
.. ok

test_dict:
	cat /builddir/build/BUILD/samtools-1.15.1/test/dat/dict.fa | /builddir/build/BUILD/samtools-1.15.1/samtools dict -a hf37d5 -s 'Homo floresiensis' -u ftp://example.com/hf37d5.fa.gz
.. ok

test_dict:
	/builddir/build/BUILD/samtools-1.15.1/samtools dict -AH < /builddir/build/BUILD/samtools-1.15.1/test/dat/dict.alias.fa
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view /tmp/UB_0CjJAjm/large_chrom.bam ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view /tmp/UB_0CjJAjm/large_chrom.bam ref2:1-541556283
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam && cat /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -X /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /tmp/UB_0CjJAjm/test_input_1_b.bam.bai ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -O sam - -X -cp -R ref2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai /tmp/UB_0CjJAjm/test_input_1_b.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.bam /tmp/UB_0CjJAjm/auto_indexed.csi && cat /tmp/UB_0CjJAjm/auto_indexed.csi
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.cram /tmp/UB_0CjJAjm/auto_indexed.crai && cat /tmp/UB_0CjJAjm/auto_indexed.crai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.sam /tmp/UB_0CjJAjm/auto_indexed.csi && cat /tmp/UB_0CjJAjm/auto_indexed.csi
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -@ 2 /tmp/UB_0CjJAjm/large_chrom.bam ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -@ 2 /tmp/UB_0CjJAjm/large_chrom.bam ref2:1-541556283
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam && cat /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -@ 2 -X /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /tmp/UB_0CjJAjm/test_input_1_b.bam.bai ref2
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -O sam - -X -cp -R ref2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam.bai /tmp/UB_0CjJAjm/test_input_1_b.bam.bai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.bam /tmp/UB_0CjJAjm/auto_indexed.csi && cat /tmp/UB_0CjJAjm/auto_indexed.csi
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.cram /tmp/UB_0CjJAjm/auto_indexed.crai && cat /tmp/UB_0CjJAjm/auto_indexed.crai
.. ok

test_index:
	/builddir/build/BUILD/samtools-1.15.1/samtools index -@ 2 -c /builddir/build/BUILD/samtools-1.15.1/test/dat/auto_indexed.tmp.sam /tmp/UB_0CjJAjm/auto_indexed.csi && cat /tmp/UB_0CjJAjm/auto_indexed.csi
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/UB_0CjJAjm/mpileup.bam.list -f /tmp/UB_0CjJAjm/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/UB_0CjJAjm/mpileup.cram.list -f /tmp/UB_0CjJAjm/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/UB_0CjJAjm/mpileup.bam.urllist -f /tmp/UB_0CjJAjm/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -b /tmp/UB_0CjJAjm/mpileup.cram.urllist -f /tmp/UB_0CjJAjm/mpileup.ref.fa.gz -r17:100-150
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -B --ff 0x14 -f /tmp/UB_0CjJAjm/mpileup.ref.fa.gz -r17:1050-1060 /tmp/UB_0CjJAjm/mpileup.1.bam | grep -v mpileup
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup -B --ff 0x14 -f /tmp/UB_0CjJAjm/mpileup.ref.fa.gz -r17:1050-1060 /tmp/UB_0CjJAjm/mpileup.1.cram | grep -v mpileup
.. ok

test_mpileup:
	/builddir/build/BUILD/samtools-1.15.1/samtools mpileup /builddir/build/BUILD/samtools-1.15.1/test/mpileup/overlap.bam | grep 128814202
test/test.pl: no IO::Pty module or can't open pty; skipping usage tests
.. ok

test_usage:
	samtools
test_view:
	Generating test data file .................. done
	1: SAM -> BAM -> SAM                                        .. ok

	2: SAM -> uncompressed BAM                                  .. ok

	3: uncompressed BAM -> SAM and compare                      .. ok

	4: SAM -> fast compressed BAM                               .. ok

	5: fast compressed BAM -> SAM and compare                   .. ok

	6: SAM -> CRAM -> SAM (UR header tags)                      .. ok

	7: SAM -> CRAM -> SAM (M5 header tags)                      .. ok

	8: BAM -> CRAM with UR -> SAM                               .. ok

	9: SAM -> BAM (M5 header tags)                              .. ok

	10: SAM -> BAM -> CRAM -> SAM (M5 header tags)              .. ok

	11: CRAM -> BAM with UR                                     .. ok

	12: CRAM -> BAM with M5                                     .. ok

	13: SAM -> SAM via stdout                                   .. ok

	14: SAM -> BAM via stdout                                   .. ok

	15: SAM -> CRAM via stdout                                  .. ok

	16: SAM from stdin -> SAM                                   .. ok

	17: BAM from stdin -> SAM                                   .. ok

	18: CRAM from stdin -> SAM                                  .. ok

	19: samtools view -H (SAM input)                            .. ok

	20: samtools view -H (BAM input)                            .. ok

	21: samtools view -H (CRAM input)                           .. ok

	22: No headers (SAM input)                                  .. ok

	23: No headers (BAM input)                                  .. ok

	24: No headers (CRAM input)                                 .. ok

	25: Filter -f 128 (SAM input)                               .. ok

	26: Count -f 128 (SAM input)                                .. ok

	27: Filter -f 128 (BAM input)                               .. ok

	28: Count -f 128 (BAM input)                                .. ok

	29: Filter -f 128 (CRAM input)                              .. ok

	30: Count -f 128 (CRAM input)                               .. ok

	31: Filter -F 128 (SAM input)                               .. ok

	32: Count -F 128 (SAM input)                                .. ok

	33: Filter -F 128 (BAM input)                               .. ok

	34: Count -F 128 (BAM input)                                .. ok

	35: Filter -F 128 (CRAM input)                              .. ok

	36: Count -F 128 (CRAM input)                               .. ok

	37: Filter -F 128 -f 2 (SAM input)                          .. ok

	38: Count -F 128 -f 2 (SAM input)                           .. ok

	39: Filter -F 128 -f 2 (BAM input)                          .. ok

	40: Count -F 128 -f 2 (BAM input)                           .. ok

	41: Filter -F 128 -f 2 (CRAM input)                         .. ok

	42: Count -F 128 -f 2 (CRAM input)                          .. ok

	43: Filter -r grp2 (SAM input)                              .. ok

	44: Count -r grp2 (SAM input)                               .. ok

	45: Filter -r grp2 (BAM input)                              .. ok

	46: Count -r grp2 (BAM input)                               .. ok

	47: Filter -r grp2 (CRAM input)                             .. ok

	48: Count -r grp2 (CRAM input)                              .. ok

	49: Filter -R /tmp/UB_0CjJAjm/view.001.fogn (SAM input)     .. ok

	50: Count -R /tmp/UB_0CjJAjm/view.001.fogn (SAM input)      .. ok

	51: Filter -R /tmp/UB_0CjJAjm/view.001.fogn (BAM input)     .. ok

	52: Count -R /tmp/UB_0CjJAjm/view.001.fogn (BAM input)      .. ok

	53: Filter -R /tmp/UB_0CjJAjm/view.001.fogn (CRAM input)    .. ok

	54: Count -R /tmp/UB_0CjJAjm/view.001.fogn (CRAM input)     .. ok

	55: Filter -R /tmp/UB_0CjJAjm/view.001.fogn -r grp2 (SAM input).. ok

	56: Count -R /tmp/UB_0CjJAjm/view.001.fogn -r grp2 (SAM input).. ok

	57: Filter -R /tmp/UB_0CjJAjm/view.001.fogn -r grp2 (BAM input).. ok

	58: Count -R /tmp/UB_0CjJAjm/view.001.fogn -r grp2 (BAM input).. ok

	59: Filter -R /tmp/UB_0CjJAjm/view.001.fogn -r grp2 (CRAM input).. ok

	60: Count -R /tmp/UB_0CjJAjm/view.001.fogn -r grp2 (CRAM input).. ok

	61: Filter -r grp2 -R /tmp/UB_0CjJAjm/view.001.fogn (SAM input).. ok

	62: Count -r grp2 -R /tmp/UB_0CjJAjm/view.001.fogn (SAM input).. ok

	63: Filter -r grp2 -R /tmp/UB_0CjJAjm/view.001.fogn (BAM input).. ok

	64: Count -r grp2 -R /tmp/UB_0CjJAjm/view.001.fogn (BAM input).. ok

	65: Filter -r grp2 -R /tmp/UB_0CjJAjm/view.001.fogn (CRAM input).. ok

	66: Count -r grp2 -R /tmp/UB_0CjJAjm/view.001.fogn (CRAM input).. ok

	67: Filter -N /tmp/UB_0CjJAjm/view.001.forn (SAM input)     .. ok

	68: Count -N /tmp/UB_0CjJAjm/view.001.forn (SAM input)      .. ok

	69: Filter -N /tmp/UB_0CjJAjm/view.001.forn (BAM input)     .. ok

	70: Count -N /tmp/UB_0CjJAjm/view.001.forn (BAM input)      .. ok

	71: Filter -N /tmp/UB_0CjJAjm/view.001.forn (CRAM input)    .. ok

	72: Count -N /tmp/UB_0CjJAjm/view.001.forn (CRAM input)     .. ok

	73: Filter -d BC (SAM input)                                .. ok

	74: Count -d BC (SAM input)                                 .. ok

	75: Filter -d BC (BAM input)                                .. ok

	76: Count -d BC (BAM input)                                 .. ok

	77: Filter -d BC (CRAM input)                               .. ok

	78: Count -d BC (CRAM input)                                .. ok

	79: Filter -d BC:TGCA (SAM input)                           .. ok

	80: Count -d BC:TGCA (SAM input)                            .. ok

	81: Filter -d BC:TGCA (BAM input)                           .. ok

	82: Count -d BC:TGCA (BAM input)                            .. ok

	83: Filter -d BC:TGCA (CRAM input)                          .. ok

	84: Count -d BC:TGCA (CRAM input)                           .. ok

	85: Filter -D BC:/tmp/UB_0CjJAjm/view.001.fobc (SAM input)  .. ok

	86: Count -D BC:/tmp/UB_0CjJAjm/view.001.fobc (SAM input)   .. ok

	87: Filter -D BC:/tmp/UB_0CjJAjm/view.001.fobc (BAM input)  .. ok

	88: Count -D BC:/tmp/UB_0CjJAjm/view.001.fobc (BAM input)   .. ok

	89: Filter -D BC:/tmp/UB_0CjJAjm/view.001.fobc (CRAM input) .. ok

	90: Count -D BC:/tmp/UB_0CjJAjm/view.001.fobc (CRAM input)  .. ok

	91: Filter -D BC:/tmp/UB_0CjJAjm/view.001.fobc -d BC:TGCA (SAM input).. ok

	92: Count -D BC:/tmp/UB_0CjJAjm/view.001.fobc -d BC:TGCA (SAM input).. ok

	93: Filter -D BC:/tmp/UB_0CjJAjm/view.001.fobc -d BC:TGCA (BAM input).. ok

	94: Count -D BC:/tmp/UB_0CjJAjm/view.001.fobc -d BC:TGCA (BAM input).. ok

	95: Filter -D BC:/tmp/UB_0CjJAjm/view.001.fobc -d BC:TGCA (CRAM input).. ok

	96: Count -D BC:/tmp/UB_0CjJAjm/view.001.fobc -d BC:TGCA (CRAM input).. ok

	97: Filter -d BC:TGCA -D BC:/tmp/UB_0CjJAjm/view.001.fobc (SAM input).. ok

	98: Count -d BC:TGCA -D BC:/tmp/UB_0CjJAjm/view.001.fobc (SAM input).. ok

	99: Filter -d BC:TGCA -D BC:/tmp/UB_0CjJAjm/view.001.fobc (BAM input).. ok

	100: Count -d BC:TGCA -D BC:/tmp/UB_0CjJAjm/view.001.fobc (BAM input).. ok

	101: Filter -d BC:TGCA -D BC:/tmp/UB_0CjJAjm/view.001.fobc (CRAM input).. ok

	102: Count -d BC:TGCA -D BC:/tmp/UB_0CjJAjm/view.001.fobc (CRAM input).. ok

	103: Filter -D RG:/tmp/UB_0CjJAjm/view.001.fogn (SAM input) .. ok

	104: Count -D RG:/tmp/UB_0CjJAjm/view.001.fogn (SAM input)  .. ok

	105: Filter -D RG:/tmp/UB_0CjJAjm/view.001.fogn (BAM input) .. ok

	106: Count -D RG:/tmp/UB_0CjJAjm/view.001.fogn (BAM input)  .. ok

	107: Filter -D RG:/tmp/UB_0CjJAjm/view.001.fogn (CRAM input).. ok

	108: Count -D RG:/tmp/UB_0CjJAjm/view.001.fogn (CRAM input) .. ok

	109: Filter -d NE:TGCA (SAM input)                          .. ok

	110: Count -d NE:TGCA (SAM input)                           .. ok

	111: Filter -d NE:TGCA (BAM input)                          .. ok

	112: Count -d NE:TGCA (BAM input)                           .. ok

	113: Filter -d NE:TGCA (CRAM input)                         .. ok

	114: Count -d NE:TGCA (CRAM input)                          .. ok

	115: Filter -d TGCA (SAM input)                             samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test115.sam -h -d TGCA /tmp/UB_0CjJAjm/view.001.sam --no-PG


.. expected failure

	116: Count -d TGCA (SAM input)                              samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d TGCA /tmp/UB_0CjJAjm/view.001.sam --no-PG


.. expected failure

	117: Filter -d TGCA (BAM input)                             samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test117.sam -h -d TGCA /tmp/UB_0CjJAjm/view.test001.bam --no-PG


.. expected failure

	118: Count -d TGCA (BAM input)                              samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d TGCA /tmp/UB_0CjJAjm/view.test001.bam --no-PG


.. expected failure

	119: Filter -d TGCA (CRAM input)                            samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test119.sam -h -d TGCA /tmp/UB_0CjJAjm/view.test006.cram --no-PG


.. expected failure

	120: Count -d TGCA (CRAM input)                             samtools view: Invalid "tag:value" option: "TGCA"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d TGCA /tmp/UB_0CjJAjm/view.test006.cram --no-PG


.. expected failure

	121: Filter -D BClong:/tmp/UB_0CjJAjm/view.001.fobc (SAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/UB_0CjJAjm/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test121.sam -h -D BClong:/tmp/UB_0CjJAjm/view.001.fobc /tmp/UB_0CjJAjm/view.001.sam --no-PG


.. expected failure

	122: Count -D BClong:/tmp/UB_0CjJAjm/view.001.fobc (SAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/UB_0CjJAjm/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -D BClong:/tmp/UB_0CjJAjm/view.001.fobc /tmp/UB_0CjJAjm/view.001.sam --no-PG


.. expected failure

	123: Filter -D BClong:/tmp/UB_0CjJAjm/view.001.fobc (BAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/UB_0CjJAjm/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test123.sam -h -D BClong:/tmp/UB_0CjJAjm/view.001.fobc /tmp/UB_0CjJAjm/view.test001.bam --no-PG


.. expected failure

	124: Count -D BClong:/tmp/UB_0CjJAjm/view.001.fobc (BAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/UB_0CjJAjm/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -D BClong:/tmp/UB_0CjJAjm/view.001.fobc /tmp/UB_0CjJAjm/view.test001.bam --no-PG


.. expected failure

	125: Filter -D BClong:/tmp/UB_0CjJAjm/view.001.fobc (CRAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/UB_0CjJAjm/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test125.sam -h -D BClong:/tmp/UB_0CjJAjm/view.001.fobc /tmp/UB_0CjJAjm/view.test006.cram --no-PG


.. expected failure

	126: Count -D BClong:/tmp/UB_0CjJAjm/view.001.fobc (CRAM input)samtools view: Invalid "tag:file" option: "BClong:/tmp/UB_0CjJAjm/view.001.fobc"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -D BClong:/tmp/UB_0CjJAjm/view.001.fobc /tmp/UB_0CjJAjm/view.test006.cram --no-PG


.. expected failure

	127: Filter -d BC:ACGT -d RG:grp2 (SAM input)               samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test127.sam -h -d BC:ACGT -d RG:grp2 /tmp/UB_0CjJAjm/view.001.sam --no-PG


.. expected failure

	128: Count -d BC:ACGT -d RG:grp2 (SAM input)                samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d BC:ACGT -d RG:grp2 /tmp/UB_0CjJAjm/view.001.sam --no-PG


.. expected failure

	129: Filter -d BC:ACGT -d RG:grp2 (BAM input)               samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test129.sam -h -d BC:ACGT -d RG:grp2 /tmp/UB_0CjJAjm/view.test001.bam --no-PG


.. expected failure

	130: Count -d BC:ACGT -d RG:grp2 (BAM input)                samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d BC:ACGT -d RG:grp2 /tmp/UB_0CjJAjm/view.test001.bam --no-PG


.. expected failure

	131: Filter -d BC:ACGT -d RG:grp2 (CRAM input)              samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -o /tmp/UB_0CjJAjm/view.test131.sam -h -d BC:ACGT -d RG:grp2 /tmp/UB_0CjJAjm/view.test006.cram --no-PG


.. expected failure

	132: Count -d BC:ACGT -d RG:grp2 (CRAM input)               samtools view: Different tag "BC" was specified before: "RG:grp2"
	Failed command:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -c -d BC:ACGT -d RG:grp2 /tmp/UB_0CjJAjm/view.test006.cram --no-PG


.. expected failure

	133: Filter -d NM:13 (SAM input)                            .. ok

	134: Count -d NM:13 (SAM input)                             .. ok

	135: Filter -d NM:13 (BAM input)                            .. ok

	136: Count -d NM:13 (BAM input)                             .. ok

	137: Filter -d NM:13 (CRAM input)                           .. ok

	138: Count -d NM:13 (CRAM input)                            .. ok

	139: Filter -d ab:z (SAM input)                             .. ok

	140: Count -d ab:z (SAM input)                              .. ok

	141: Filter -d ab:z (BAM input)                             .. ok

	142: Count -d ab:z (BAM input)                              .. ok

	143: Filter -d ab:z (CRAM input)                            .. ok

	144: Count -d ab:z (CRAM input)                             .. ok

	145: Filter -l Library 2 (SAM input)                        .. ok

	146: Count -l Library 2 (SAM input)                         .. ok

	147: Filter -l Library 2 (BAM input)                        .. ok

	148: Count -l Library 2 (BAM input)                         .. ok

	149: Filter -l Library 2 (CRAM input)                       .. ok

	150: Count -l Library 2 (CRAM input)                        .. ok

	151: Filter -l Library 3 (SAM input)                        .. ok

	152: Count -l Library 3 (SAM input)                         .. ok

	153: Filter -l Library 3 (BAM input)                        .. ok

	154: Count -l Library 3 (BAM input)                         .. ok

	155: Filter -l Library 3 (CRAM input)                       .. ok

	156: Count -l Library 3 (CRAM input)                        .. ok

	157: Filter -q 50 (SAM input)                               .. ok

	158: Count -q 50 (SAM input)                                .. ok

	159: Filter -q 50 (BAM input)                               .. ok

	160: Count -q 50 (BAM input)                                .. ok

	161: Filter -q 50 (CRAM input)                              .. ok

	162: Count -q 50 (CRAM input)                               .. ok

	163: Filter -q 99 (SAM input)                               .. ok

	164: Count -q 99 (SAM input)                                .. ok

	165: Filter -q 99 (BAM input)                               .. ok

	166: Count -q 99 (BAM input)                                .. ok

	167: Filter -q 99 (CRAM input)                              .. ok

	168: Count -q 99 (CRAM input)                               .. ok

	169: Filter -q 100 (SAM input)                              .. ok

	170: Count -q 100 (SAM input)                               .. ok

	171: Filter -q 100 (BAM input)                              .. ok

	172: Count -q 100 (BAM input)                               .. ok

	173: Filter -q 100 (CRAM input)                             .. ok

	174: Count -q 100 (CRAM input)                              .. ok

	175: Filter -x fa (SAM input)                               .. ok

	176: Count -x fa (SAM input)                                .. ok

	177: Filter -x fa (BAM input)                               .. ok

	178: Count -x fa (BAM input)                                .. ok

	179: Filter -x fa (CRAM input)                              .. ok

	180: Count -x fa (CRAM input)                               .. ok

	181: Filter -x fa -x ha (SAM input)                         .. ok

	182: Count -x fa -x ha (SAM input)                          .. ok

	183: Filter -x fa -x ha (BAM input)                         .. ok

	184: Count -x fa -x ha (BAM input)                          .. ok

	185: Filter -x fa -x ha (CRAM input)                        .. ok

	186: Count -x fa -x ha (CRAM input)                         .. ok

	187: Filter -x fa,ha (SAM input)                            .. ok

	188: Count -x fa,ha (SAM input)                             .. ok

	189: Filter -x fa,ha (BAM input)                            .. ok

	190: Count -x fa,ha (BAM input)                             .. ok

	191: Filter -x fa,ha (CRAM input)                           .. ok

	192: Count -x fa,ha (CRAM input)                            .. ok

	193: Filter -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	194: Count -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	195: Filter -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	196: Count -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	197: Filter -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	198: Count -x ^RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	199: Filter --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	200: Count --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (SAM input).. ok

	201: Filter --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	202: Count --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (BAM input).. ok

	203: Filter --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	204: Count --keep-tag RG,BC,NM,MD,H0,aa,ab,za,ba,bb,bc,bd,be,bf,bg,ia (CRAM input).. ok

	205: Filter -x fa -r grp2 (SAM input)                       .. ok

	206: Count -x fa -r grp2 (SAM input)                        .. ok

	207: Filter -x fa -r grp2 (BAM input)                       .. ok

	208: Count -x fa -r grp2 (BAM input)                        .. ok

	209: Filter -x fa -r grp2 (CRAM input)                      .. ok

	210: Count -x fa -r grp2 (CRAM input)                       .. ok

	211: Filter -x RG -r grp2 (SAM input)                       .. ok

	212: Count -x RG -r grp2 (SAM input)                        .. ok

	213: Filter -x RG -r grp2 (BAM input)                       .. ok

	214: Count -x RG -r grp2 (BAM input)                        .. ok

	215: Filter -x RG -r grp2 (CRAM input)                      .. ok

	216: Count -x RG -r grp2 (CRAM input)                       .. ok

	217: Filter -m 10 (SAM input)                               .. ok

	218: Count -m 10 (SAM input)                                .. ok

	219: Filter -m 10 (BAM input)                               .. ok

	220: Count -m 10 (BAM input)                                .. ok

	221: Filter -m 10 (CRAM input)                              .. ok

	222: Count -m 10 (CRAM input)                               .. ok

	223: Filter -m 11 (SAM input)                               .. ok

	224: Count -m 11 (SAM input)                                .. ok

	225: Filter -m 11 (BAM input)                               .. ok

	226: Count -m 11 (BAM input)                                .. ok

	227: Filter -m 11 (CRAM input)                              .. ok

	228: Count -m 11 (CRAM input)                               .. ok

	229: Filter -m 15 (SAM input)                               .. ok

	230: Count -m 15 (SAM input)                                .. ok

	231: Filter -m 15 (BAM input)                               .. ok

	232: Count -m 15 (BAM input)                                .. ok

	233: Filter -m 15 (CRAM input)                              .. ok

	234: Count -m 15 (CRAM input)                               .. ok

	235: Filter -m 16 (SAM input)                               .. ok

	236: Count -m 16 (SAM input)                                .. ok

	237: Filter -m 16 (BAM input)                               .. ok

	238: Count -m 16 (BAM input)                                .. ok

	239: Filter -m 16 (CRAM input)                              .. ok

	240: Count -m 16 (CRAM input)                               .. ok

	241: Filter -e !(flag & 128) && (flag & 2) (SAM input)      .. ok

	242: Count -e !(flag & 128) && (flag & 2) (SAM input)       .. ok

	243: Filter -e !(flag & 128) && (flag & 2) (BAM input)      .. ok

	244: Count -e !(flag & 128) && (flag & 2) (BAM input)       .. ok

	245: Filter -e !(flag & 128) && (flag & 2) (CRAM input)     .. ok

	246: Count -e !(flag & 128) && (flag & 2) (CRAM input)      .. ok

	247: Filter -e [BC] (SAM input)                             .. ok

	248: Count -e [BC] (SAM input)                              .. ok

	249: Filter -e [BC] (BAM input)                             .. ok

	250: Count -e [BC] (BAM input)                              .. ok

	251: Filter -e [BC] (CRAM input)                            .. ok

	252: Count -e [BC] (CRAM input)                             .. ok

	253: Filter -e [BC] == "ACGT" || [BC] == "AATTCCGG" (SAM input).. ok

	254: Count -e [BC] == "ACGT" || [BC] == "AATTCCGG" (SAM input).. ok

	255: Filter -e [BC] == "ACGT" || [BC] == "AATTCCGG" (BAM input).. ok

	256: Count -e [BC] == "ACGT" || [BC] == "AATTCCGG" (BAM input).. ok

	257: Filter -e [BC] == "ACGT" || [BC] == "AATTCCGG" (CRAM input).. ok

	258: Count -e [BC] == "ACGT" || [BC] == "AATTCCGG" (CRAM input).. ok

	259: Filter -e mapq >= 50 (SAM input)                       .. ok

	260: Count -e mapq >= 50 (SAM input)                        .. ok

	261: Filter -e mapq >= 50 (BAM input)                       .. ok

	262: Count -e mapq >= 50 (BAM input)                        .. ok

	263: Filter -e mapq >= 50 (CRAM input)                      .. ok

	264: Count -e mapq >= 50 (CRAM input)                       .. ok

	265: Filter -e mapq >= 99 (SAM input)                       .. ok

	266: Count -e mapq >= 99 (SAM input)                        .. ok

	267: Filter -e mapq >= 99 (BAM input)                       .. ok

	268: Count -e mapq >= 99 (BAM input)                        .. ok

	269: Filter -e mapq >= 99 (CRAM input)                      .. ok

	270: Count -e mapq >= 99 (CRAM input)                       .. ok

	271: Filter -e mapq >= 100 (SAM input)                      .. ok

	272: Count -e mapq >= 100 (SAM input)                       .. ok

	273: Filter -e mapq >= 100 (BAM input)                      .. ok

	274: Count -e mapq >= 100 (BAM input)                       .. ok

	275: Filter -e mapq >= 100 (CRAM input)                     .. ok

	276: Count -e mapq >= 100 (CRAM input)                      .. ok

	277: 1bp reads file SAM -> BAM -> SAM                       .. ok

	278: 1bp reads file SAM -> CRAM -> SAM                      .. ok

	278: Region  Z (BAM input)                                  .. ok

	279: Count  Z (BAM input)                                   .. ok

	280: Region  Z (CRAM input)                                 .. ok

	281: Count  Z (CRAM input)                                  .. ok

	282: Region  Z:30 (BAM input)                               .. ok

	283: Count  Z:30 (BAM input)                                .. ok

	284: Region  Z:30 (CRAM input)                              .. ok

	285: Count  Z:30 (CRAM input)                               .. ok

	286: Region  Z:20-40 (BAM input)                            .. ok

	287: Count  Z:20-40 (BAM input)                             .. ok

	288: Region  Z:20-40 (CRAM input)                           .. ok

	289: Count  Z:20-40 (CRAM input)                            .. ok

	290: Region  ref1 (BAM input)                               .. ok

	291: Count  ref1 (BAM input)                                .. ok

	292: Region  ref1 (CRAM input)                              .. ok

	293: Count  ref1 (CRAM input)                               .. ok

	294: Region  ref1:15 (BAM input)                            .. ok

	295: Count  ref1:15 (BAM input)                             .. ok

	296: Region  ref1:15 (CRAM input)                           .. ok

	297: Count  ref1:15 (CRAM input)                            .. ok

	298: Region  ref1:15-45 (BAM input)                         .. ok

	299: Count  ref1:15-45 (BAM input)                          .. ok

	300: Region  ref1:15-45 (CRAM input)                        .. ok

	301: Count  ref1:15-45 (CRAM input)                         .. ok

	302: Region  ref1:15-45 ref2 (BAM input)                    .. ok

	303: Count  ref1:15-45 ref2 (BAM input)                     .. ok

	304: Region  ref1:15-45 ref2 (CRAM input)                   .. ok

	305: Count  ref1:15-45 ref2 (CRAM input)                    .. ok

	306: Region  ref1:15-45 ref2:16 (BAM input)                 .. ok

	307: Count  ref1:15-45 ref2:16 (BAM input)                  .. ok

	308: Region  ref1:15-45 ref2:16 (CRAM input)                .. ok

	309: Count  ref1:15-45 ref2:16 (CRAM input)                 .. ok

	310: Region  ref1:15-45 ref2:16-31 (BAM input)              .. ok

	311: Count  ref1:15-45 ref2:16-31 (BAM input)               .. ok

	312: Region  ref1:15-45 ref2:16-31 (CRAM input)             .. ok

	313: Count  ref1:15-45 ref2:16-31 (CRAM input)              .. ok

	314: Region  ref1:15-15 ref1:45-45 (BAM input)              .. ok

	315: Count  ref1:15-15 ref1:45-45 (BAM input)               .. ok

	316: Region  ref1:15-15 ref1:45-45 (CRAM input)             .. ok

	317: Count  ref1:15-15 ref1:45-45 (CRAM input)              .. ok

	318: Region -f 128 ref1 (BAM input)                         .. ok

	319: Count -f 128 ref1 (BAM input)                          .. ok

	320: Region -f 128 ref1 (CRAM input)                        .. ok

	321: Count -f 128 ref1 (CRAM input)                         .. ok

	322: Region -q 50 ref1:15-45 (BAM input)                    .. ok

	323: Count -q 50 ref1:15-45 (BAM input)                     .. ok

	324: Region -q 50 ref1:15-45 (CRAM input)                   .. ok

	325: Count -q 50 ref1:15-45 (CRAM input)                    .. ok

	326: Region -r grp2 ref1:15-45 (BAM input)                  .. ok

	327: Count -r grp2 ref1:15-45 (BAM input)                   .. ok

	328: Region -r grp2 ref1:15-45 (CRAM input)                 .. ok

	329: Count -r grp2 ref1:15-45 (CRAM input)                  .. ok

	330: Region  * (BAM input)                                  .. ok

	331: Count  * (BAM input)                                   .. ok

	332: Region  * (CRAM input)                                 .. ok

	333: Count  * (CRAM input)                                  .. ok

	334: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (BAM input).. ok

	335: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (BAM input).. ok

	336: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (CRAM input).. ok

	337: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed  (CRAM input).. ok

	338: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (BAM input).. ok

	339: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (BAM input).. ok

	340: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (CRAM input).. ok

	341: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.02.bed  (CRAM input).. ok

	342: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (BAM input).. ok

	343: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (BAM input).. ok

	344: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (CRAM input).. ok

	345: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed  (CRAM input).. ok

	346: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (BAM input).. ok

	347: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (BAM input).. ok

	348: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (CRAM input).. ok

	349: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.02.bed  (CRAM input).. ok

	350: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (BAM input).. ok

	351: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (BAM input).. ok

	352: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (CRAM input).. ok

	353: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z (CRAM input).. ok

	354: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (BAM input).. ok

	355: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (BAM input).. ok

	356: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (CRAM input).. ok

	357: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:30 (CRAM input).. ok

	358: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (BAM input).. ok

	359: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (BAM input).. ok

	360: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (CRAM input).. ok

	361: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:10-30 (CRAM input).. ok

	362: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (BAM input).. ok

	363: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (BAM input).. ok

	364: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (CRAM input).. ok

	365: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.002.01.bed Z:25-35 (CRAM input).. ok

	366: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (BAM input).. ok

	367: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (BAM input).. ok

	368: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (CRAM input).. ok

	369: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:11-16 (CRAM input).. ok

	370: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (BAM input).. ok

	371: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (BAM input).. ok

	372: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (CRAM input).. ok

	373: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref2 (CRAM input).. ok

	374: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (BAM input).. ok

	375: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (BAM input).. ok

	376: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (CRAM input).. ok

	377: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed ref1:1-15 ref1:44-45 (CRAM input).. ok

	378: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (BAM input).. ok

	379: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (BAM input).. ok

	380: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (CRAM input).. ok

	381: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1  (CRAM input).. ok

	382: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (BAM input).. ok

	383: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (BAM input).. ok

	384: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (CRAM input).. ok

	385: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -f 128  (CRAM input).. ok

	386: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (BAM input).. ok

	387: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (BAM input).. ok

	388: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (CRAM input).. ok

	389: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -q 5  (CRAM input).. ok

	390: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (BAM input).. ok

	391: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (BAM input).. ok

	392: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (CRAM input).. ok

	393: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -r grp1 ref1:11-16 (CRAM input).. ok

	394: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (BAM input).. ok

	395: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (BAM input).. ok

	396: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (CRAM input).. ok

	397: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap  (CRAM input).. ok

	398: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (BAM input).. ok

	399: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (BAM input).. ok

	400: Region -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (CRAM input).. ok

	401: Count -L /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.01.bed -M --unmap ref1:11-30 (CRAM input).. ok

	402: Make BAM with no M5/UR tags                            .. ok

	403: Add @SQ with -t (SAM -> SAM)                           .. ok

	404: Add @SQ with -T (SAM -> SAM)                           .. ok

	405: Add @SQ with -t (BAM -> SAM)                           .. ok

	406: Add @SQ with -T (BAM -> SAM)                           .. ok

	407: Add @SQ with -t (SAM -> BAM)                           .. ok

	408: Add @SQ with -T (SAM -> BAM)                           .. ok

	409: Add @SQ with -t (BAM -> BAM)                           .. ok

	410: Add @SQ with -T (BAM -> BAM)                           .. ok

	411: Add @SQ with -t (SAM -> CRAM)                          .. ok

	412: Add @SQ with -T (SAM -> CRAM)                          .. ok

	413: Add @SQ with -t (BAM -> CRAM)                          .. ok

	414: Add @SQ with -T (BAM -> CRAM)                          .. ok

	415: Make CRAM with no UR field                             .. ok

	416: Decoding CRAM with no UR field via -T                  .. ok

	417: CIGAR B-operator removal                               .. ok

	418: Big SAM -> BAM                                         .. ok

	419: Big SAM -> BAM (2 threads)                             .. ok

	420: Big SAM -> BAM (4 threads)                             .. ok

	421: Big SAM -> CRAM                                        .. ok

	422: Big SAM -> CRAM (2 threads)                            .. ok

	423: Big SAM -> CRAM (4 threads)                            .. ok

	424: Subsample 0.2 (SAM input) ............ ok

	425: Subsample 0.5 (SAM input) ............ ok

	426: Subsample 0.8 (SAM input) ............ ok

	427: Subsample 0.2 (BAM input) ............ ok

	428: Subsample 0.5 (BAM input) ............ ok

	429: Subsample 0.8 (BAM input) ............ ok

	430: Subsample 0.2 (CRAM input) ............ ok

	431: Subsample 0.5 (CRAM input) ............ ok

	432: Subsample 0.8 (CRAM input) ............ ok

	433: SAM add PG                                             .. ok

	434: Unset dup flag, remove dt and do tags                  .. ok

	435: Unmap dup flagged reads.                               .. ok

	436: Unmap dup flagged reads.                               .. ok

	437: fetch pairs                                            .. ok

	438: fetch pairs                                            .. ok

	439: fetch pairs                                            .. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 0 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 1 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 5 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 29 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 30 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -n 0 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -n 1 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -n 5 /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_head:
	/builddir/build/BUILD/samtools-1.15.1/samtools head -h 5 -n 5 < /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.sam
.. ok

test_cat:
	Generating test data file .................. done
	Generate BAM file #1                                        .. ok

	Generate CRAM file #1                                       .. ok

	Generating test data file .................. done
	Generate BAM file #2                                        .. ok

	Generate CRAM file #2                                       .. ok

	Generating test data file .................. done
	Generate BAM file #3                                        .. ok

	Generate CRAM file #3                                       .. ok

	Generating test data file .................. done
	Generate BAM file #4                                        .. ok

	Generate CRAM file #4                                       .. ok

	1: cat BAM files                                            .. ok

	2: cat recompressed BAM files                               .. ok

	3: cat CRAM files                                           .. ok

	4: cat BAM files to stdout                                  .. ok

	5: cat recompressed BAM files to stdout                     .. ok

	6: cat CRAM files to stdout                                 .. ok

	7: cat BAM files with new header                            .. ok

	8: cat recompressed BAM files with new header               .. ok

	9: cat CRAM files with new header                           .. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -0 test/bam2fq/1.1.fq.expected  | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -s test/bam2fq/1.1.fq.expected  | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -s test/bam2fq/5.s.fq.expected  | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/5.1.fq.expected test/bam2fq/5.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -N -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -i -1 test/bam2fq/12.1.fq.expected -2 test/bam2fq/12.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -i --index-format 'i*i*' -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import --barcode-tag OX -i -1 test/bam2fq/12.1.fq.expected -2 test/bam2fq/12.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq --barcode-tag OX -i --index-format 'i*i*' -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -T "" -1 test/bam2fq/6.1.fq.expected -2 test/bam2fq/6.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -N -T RG,BC,QT -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import -T "*" -1 test/bam2fq/7.1.fq.expected -2 test/bam2fq/7.2.fq.expected | /builddir/build/BUILD/samtools-1.15.1/samtools fastq -N -T RG,BC,QT,MD,ia -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected -R rgid
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected -r ID:rgid
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/bam2fq/1.1.fq.expected test/bam2fq/1.2.fq.expected -r '@RG	ID:rgid'
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/2.interleaved.fq -T ""
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/3.interleaved.fq -i
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/4.aux.fq -T "*"
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/4.aux.fq -T ""
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import test/import/4.aux.fq -T XZ,XA,AA
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import --i1 test/import/5-i1.fq --i2  test/import/5-i2.fq --r1 test/import/5-r1.fq --r2 test/import/5-r2.fq
.. ok

test_import:
	/builddir/build/BUILD/samtools-1.15.1/samtools import --i1 test/import/5-i1.fq --i2  test/import/5-i2.fq --r1 test/import/5-r1.fq --r2 test/import/5-r2.fq --barcode-tag OX --quality-tag BZ
.. ok

test_bam2fq:
	Generate BAM file                                           .. ok

	Generate CRAM file                                          .. ok

	1: fastq  (SAM input)                                       [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	2: fastq -n (SAM input)                                     [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	3: fastq  (BAM input)                                       [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	4: fastq -n (BAM input)                                     [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	5: fastq  (CRAM input)                                      [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	6: fastq -n (CRAM input)                                    [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.002.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.003.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.010.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -N --index-format 'n*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc_split.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -t -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -t -T MD,ia -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -i --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --barcode-tag BC -i --index-format 'i*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -i --index-format 'i*i*' -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.703.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fasta  -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fa -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fa /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -o /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -N -s /tmp/UB_0CjJAjm/bam2fq.discard.s.fq -0 /tmp/UB_0CjJAjm/bam2fq.discard.0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  -T ba,bb,bc,bd,be,bf,bg /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.013.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq  --index-format 'i8n1i8' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i1.fq --i2 /builddir/build/BUILD/samtools-1.15.1/test/i2.fq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.014.sam
.. ok

test_bam2fq:
	Generate BAM file (2 threads)                               .. ok

	Generate CRAM file (2 threads)                              .. ok

	1: fastq  (SAM input) (2 threads)                           [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	2: fastq -n (SAM input) (2 threads)                         [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	3: fastq  (BAM input) (2 threads)                           [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	4: fastq -n (BAM input) (2 threads)                         [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	5: fastq  (CRAM input) (2 threads)                          [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

	6: fastq -n (CRAM input) (2 threads)                        [M::bam2fq_mainloop] discarded 0 singletons
[M::bam2fq_mainloop] processed 36 reads
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.002.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.003.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -O --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.010.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -N --index-format 'n*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/bc_split.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -t -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -t -T MD,ia -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -i --index-format 'n2i2' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.004.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --barcode-tag BC -i --index-format 'i*i*' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i.fq -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -i --index-format 'i*i*' -s /builddir/build/BUILD/samtools-1.15.1/test/s.fq -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.005.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -1 /builddir/build/BUILD/samtools-1.15.1/test/1.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/2.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.703.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fq -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fasta -@ 2 -N -1 /builddir/build/BUILD/samtools-1.15.1/test/o.fa -2 /builddir/build/BUILD/samtools-1.15.1/test/o.fa /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -o /builddir/build/BUILD/samtools-1.15.1/test/o.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -N -s /tmp/UB_0CjJAjm/bam2fq.discard.s.fq -0 /tmp/UB_0CjJAjm/bam2fq.discard.0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.001.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 -T ba,bb,bc,bd,be,bf,bg /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.013.sam
.. ok

test_bam2fq:
	/builddir/build/BUILD/samtools-1.15.1/samtools fastq -@ 2 --index-format 'i8n1i8' --i1 /builddir/build/BUILD/samtools-1.15.1/test/i1.fq --i2 /builddir/build/BUILD/samtools-1.15.1/test/i2.fq -0 /builddir/build/BUILD/samtools-1.15.1/test/0.fq /builddir/build/BUILD/samtools-1.15.1/test/dat/bam2fq.014.sam
.. ok

test_depad:
	Generate BAM file                                           .. ok

	depad  (SAM input)                                          .. ok

	depad -s (SAM input)                                        .. ok

	depad -u (SAM input)                                        .. ok

	depad -1 (SAM input)                                        .. ok

	depad  (BAM input)                                          .. ok

	depad -s (BAM input)                                        .. ok

	depad -u (BAM input)                                        .. ok

	depad -1 (BAM input)                                        .. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/1_map_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/1_map_cigar_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/2_equal_cigar_full_seq.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/2_equal_cigar_full_seq_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/3_map_cigar_equal_seq.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/3_map_cigar_equal_seq_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/4_X_cigar_full_seq.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/4_X_cigar_full_seq_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/5_insert_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/5_insert_cigar_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa -i 0 /builddir/build/BUILD/samtools-1.15.1/test/stat/5_insert_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/7_supp.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/7_supp_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/8_secondary.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/8_secondary_large.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -S RG -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/1_map_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -S RG -r /builddir/build/BUILD/samtools-1.15.1/test/stat/test.fa /builddir/build/BUILD/samtools-1.15.1/test/stat/10_map_cigar.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -t /builddir/build/BUILD/samtools-1.15.1/test/stat/11.stats.targets /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam ref1:10-24 ref1:30-46 ref1:39-56 | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -g 4 -t /builddir/build/BUILD/samtools-1.15.1/test/stat/11.stats.targets /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -g 4 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam ref1:10-24 ref1:30-46 ref1:39-56 | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_3reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -p -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_3reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_2reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/12_overlaps.bam -p -t /builddir/build/BUILD/samtools-1.15.1/test/stat/12_2reads.bed | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_ok.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_ok_ox_bz.sam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_fail_bc_length.sam | tail -n+4

	/builddir/build/BUILD/samtools-1.15.1/test/stat/13.barcodes.fail.expected: No such file or directory
.. expected failure

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_fail_hyphen.sam | tail -n+4

	/builddir/build/BUILD/samtools-1.15.1/test/stat/13.barcodes.fail.expected: No such file or directory
.. expected failure

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats /builddir/build/BUILD/samtools-1.15.1/test/stat/13_barcodes_fail_qt_length.sam | tail -n+4

	/builddir/build/BUILD/samtools-1.15.1/test/stat/13.barcodes.fail.expected: No such file or directory
.. expected failure

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I s1 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I grp2 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I grp3 /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_stats:
	/builddir/build/BUILD/samtools-1.15.1/samtools stats -I Sample /builddir/build/BUILD/samtools-1.15.1/test/stat/11_target.bam | tail -n+4
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam -b /tmp/LIi3WpNzrV - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -r -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -cp -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a_regex.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b_regex.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -o - -s 1 -O sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -p -c -t PG -O SAM - /tmp/UB_0CjJAjm/merge.tag.1.bam /tmp/UB_0CjJAjm/merge.tag.2.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -s 1 -p -c -n -t PG -O SAM - /tmp/UB_0CjJAjm/merge.tag.3.bam /tmp/UB_0CjJAjm/merge.tag.4.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge --no-PG -O SAM - /builddir/build/BUILD/samtools-1.15.1/test/merge/test_no_pg_rg_co.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge --no-PG -O SAM -L /builddir/build/BUILD/samtools-1.15.1/test/merge/merge.bed - /tmp/UB_0CjJAjm/merge.bed.1.bam /tmp/UB_0CjJAjm/merge.bed.2.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam -b /tmp/bawvRFOn7H - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -r -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -cp -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -O sam - /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a_regex.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b_regex.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -o - -s 1 -O sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_b.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_c.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -p -c -t PG -O SAM - /tmp/UB_0CjJAjm/merge.tag.1.bam /tmp/UB_0CjJAjm/merge.tag.2.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 -s 1 -p -c -n -t PG -O SAM - /tmp/UB_0CjJAjm/merge.tag.3.bam /tmp/UB_0CjJAjm/merge.tag.4.bam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 --no-PG -O SAM - /builddir/build/BUILD/samtools-1.15.1/test/merge/test_no_pg_rg_co.sam
.. ok

test_merge:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -@ 2 --no-PG -O SAM -L /builddir/build/BUILD/samtools-1.15.1/test/merge/merge.bed - /tmp/UB_0CjJAjm/merge.bed.1.bam /tmp/UB_0CjJAjm/merge.bed.2.bam
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/UB_0CjJAjm/sortout
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -f /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/UB_0CjJAjm/sortout.bam
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -o /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/UB_0CjJAjm/sorttmp
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -n -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -n -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -t AS -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -t FI -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/UB_0CjJAjm/sortout
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -f /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/UB_0CjJAjm/sortout.bam
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -o /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam /tmp/UB_0CjJAjm/sorttmp
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -n -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -n -t RG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -t AS -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_sort:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -@ 2 -t FI -m 10M /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam -O SAM -o -
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam -O /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate1.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate3.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam -f /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/1_fast_collate.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate --output-fmt=sam -f -r 4 /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/2_fast_collate_with_tmp.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam -O /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate1.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 -o /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp.sam  /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate2.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_d.sam /builddir/build/BUILD/samtools-1.15.1/test/collate/collate3.tmp
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam -f /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/1_fast_collate.sam
.. ok

test_collate:
	/builddir/build/BUILD/samtools-1.15.1/samtools collate -@ 2 --output-fmt=sam -f -r 4 /builddir/build/BUILD/samtools-1.15.1/test/collate/fast_collate.sam -o /builddir/build/BUILD/samtools-1.15.1/test/collate/2_fast_collate_with_tmp.sam
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/1_coord_sort.sam -

	ERR: [bam_mating_core] ERROR: Coordinate sorted, require grouped/sorted by queryname.

.. expected failure

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/2_isize_overflow.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/3_reverse_read_pp_lt.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/4_reverse_read_pp_equal.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/5_ct.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/6_ct_replace.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/7_two_read_mapped.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/8_isize_overflow_64bit.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/1_coord_sort.sam -

	ERR: [bam_mating_core] ERROR: Coordinate sorted, require grouped/sorted by queryname.

.. expected failure

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/2_isize_overflow.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/3_reverse_read_pp_lt.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/4_reverse_read_pp_equal.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/5_ct.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -cO sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/6_ct_replace.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/7_two_read_mapped.sam -
.. ok

test_fixmate:
	/builddir/build/BUILD/samtools-1.15.1/samtools fixmate -@ 2 -O sam /builddir/build/BUILD/samtools-1.15.1/test/fixmate/8_isize_overflow_64bit.sam -
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools calmd -uAr /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.1.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.ref.fa
.. ok

/builddir/build/BUILD/samtools-1.15.1/samtools calmd -@ 2 -uAr /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.1.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/mpileup.ref.fa
.. ok

test_idxstat:
	/builddir/build/BUILD/samtools-1.15.1/samtools idxstats /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.bam
.. ok

test_idxstat:
	/builddir/build/BUILD/samtools-1.15.1/samtools idxstats /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.cram
.. ok

test_idxstat:
	/builddir/build/BUILD/samtools-1.15.1/samtools idxstats /builddir/build/BUILD/samtools-1.15.1/test/dat/test_input_1_a.sam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/1.quickcheck.badeof.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/2.quickcheck.badheader.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/3.quickcheck.ok.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/4.quickcheck.ok.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/5.quickcheck.scramble30.truncated.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/6.quickcheck.cram21.ok.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/7.quickcheck.cram30.ok.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/8.quickcheck.cram21.truncated.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/9.quickcheck.cram30.truncated.cram
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/10.quickcheck.notargets.bam
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck -v  /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/1.quickcheck.badeof.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/2.quickcheck.badheader.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/3.quickcheck.ok.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/4.quickcheck.ok.bam /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/5.quickcheck.scramble30.truncated.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/6.quickcheck.cram21.ok.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/7.quickcheck.cram30.ok.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/8.quickcheck.cram21.truncated.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/9.quickcheck.cram30.truncated.cram /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/10.quickcheck.notargets.bam | sed 's,.*/quickcheck/,,'
.. ok

test_quickcheck:
	/builddir/build/BUILD/samtools-1.15.1/samtools quickcheck -uv /builddir/build/BUILD/samtools-1.15.1/test/quickcheck/10.quickcheck.notargets.bam | sed 's,.*/quickcheck/,,'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.bam | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v21.cram | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader --in-place /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v21.cram && /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v21.cram | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader --in-place /builddir/build/BUILD/samtools-1.15.1/test/reheader/hdr.sam /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram && /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader -c "sed 's/2014 Genome/2019 Genome/g'" /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.bam | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_reheader:
	/builddir/build/BUILD/samtools-1.15.1/samtools reheader -c "sed 's/2014 Genome/2019 Genome/g'" /builddir/build/BUILD/samtools-1.15.1/test/dat/view.001.tmp.v30.cram | /builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG | perl -pe 's/	VN:.*//'
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -m overwrite_all /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -m orphan_only /builddir/build/BUILD/samtools-1.15.1/test/addrprg/2_fixup_orphan.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -R '1#9' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -r '@RG\tID:1#8\tCN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -m overwrite_all -R '1#8' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -r 'ID:1#8' -r 'CN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -O sam -w -r '@RG\tID:1#8\tCN:Sanger\tDS:Testing the editing code.' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -m overwrite_all /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -m orphan_only /builddir/build/BUILD/samtools-1.15.1/test/addrprg/2_fixup_orphan.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -R '1#9' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -r '@RG\tID:1#8\tCN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -m overwrite_all -R '1#8' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -r 'ID:1#8' -r 'CN:SC' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/4_fixup_norg.sam
.. ok

test_addrprg:
	/builddir/build/BUILD/samtools-1.15.1/samtools addreplacerg -@ 2 -O sam -w -r '@RG\tID:1#8\tCN:Sanger\tDS:Testing the editing code.' /builddir/build/BUILD/samtools-1.15.1/test/addrprg/1_fixup.sam
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/1_name_sort.sam -

	ERR: [markdup] error: queryname sorted, must be sorted by coordinate.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/2_bad_order.sam -

	ERR: [markdup] error: not in coordinate sorted order.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/3_missing_mc.sam -

	ERR: [markdup] error: no MC tag. Please run samtools fixmate on file first.
[markdup] error: unable to assign pair hash key.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/4_missing_ms.sam -

	ERR: [markdup] error: no ms score tag. Please run samtools fixmate on file first.
[markdup] error: no ms score tag. Please run samtools fixmate on file first.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/5_markdup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -O sam -r --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/6_remove_dups.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/7_mark_supp_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 100 --mode s -t -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/8_optical_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t --include-fails -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/9_optical_dup_qcfail.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t -O sam --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+):([[:digit:]]+)$' --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+):([[:print:]]+)' --coords-order xyt --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+)' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+)$' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/12_optical_chain_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/1_name_sort.sam -

	ERR: [markdup] error: queryname sorted, must be sorted by coordinate.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/2_bad_order.sam -

	ERR: [markdup] error: not in coordinate sorted order.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/3_missing_mc.sam -

	ERR: [markdup] error: no MC tag. Please run samtools fixmate on file first.
[markdup] error: unable to assign pair hash key.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/4_missing_ms.sam -

	ERR: [markdup] error: no ms score tag. Please run samtools fixmate on file first.
[markdup] error: no ms score tag. Please run samtools fixmate on file first.

.. expected failure

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/5_markdup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -O sam -r --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/6_remove_dups.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/7_mark_supp_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 100 --mode s -t -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/8_optical_dup.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t --include-fails -O sam --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/9_optical_dup_qcfail.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t -O sam --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+):([[:digit:]]+)$' --no-PG -S /builddir/build/BUILD/samtools-1.15.1/test/markdup/10_optical_chain.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+):([[:print:]]+)' --coords-order xyt --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 100 --mode s -t -O sam --read-coords '^([0-9]+):([0-9]+)' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/11_optical_dup_regex.sam -
.. ok

test_markdup:
	/builddir/build/BUILD/samtools-1.15.1/samtools markdup -@ 2 -S -d 2500 --mode s -t -O sam --read-coords '([[:digit:]]+):([[:digit:]]+)$' --coords-order xy --no-PG /builddir/build/BUILD/samtools-1.15.1/test/markdup/12_optical_chain_regex.sam -
.. ok

test_bedcov:
	/builddir/build/BUILD/samtools-1.15.1/samtools bedcov /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bed /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bam
.. ok

test_bedcov:
	/builddir/build/BUILD/samtools-1.15.1/samtools bedcov -j /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bed /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bam
.. ok

test_bedcov:
	/builddir/build/BUILD/samtools-1.15.1/samtools bedcov -g512 -G2048 /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov_gG.bed /builddir/build/BUILD/samtools-1.15.1/test/bedcov/bedcov.bam
.. ok

test_split:
	/builddir/build/BUILD/samtools-1.15.1/samtools split  --output-fmt sam -u /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.unk.sam -f /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.%!.%. /builddir/build/BUILD/samtools-1.15.1/test/split/split.sam
.. ok

test_split:
	/builddir/build/BUILD/samtools-1.15.1/samtools split  -@ 2 --output-fmt sam -u /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.unk.sam -f /builddir/build/BUILD/samtools-1.15.1/test/split/split.tmp.%!.%. /builddir/build/BUILD/samtools-1.15.1/test/split/split.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /tmp/UB_0CjJAjm/longref.sam.gz
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG /tmp/UB_0CjJAjm/longref.sam.gz CHROMOSOME_I:10000000114-10000000168
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools view -h --no-PG -L /builddir/build/BUILD/samtools-1.15.1/test/large_pos/test.bed /tmp/UB_0CjJAjm/longref.sam.gz
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort -O sam --no-PG -m 10M /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref_name.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools merge -O sam --no-PG - /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref.sam /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref2.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools depth /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools depth -b /builddir/build/BUILD/samtools-1.15.1/test/large_pos/test.bed /builddir/build/BUILD/samtools-1.15.1/test/large_pos/longref.sam
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools tview -d T -p CHROMOSOME_I:10000000000 /tmp/UB_0CjJAjm/longref.sam.gz
.. ok

test_large_positions:
	/builddir/build/BUILD/samtools-1.15.1/samtools sort    -O sam --no-PG -n -m 10M test/large_pos/longref3.sam |
                     /builddir/build/BUILD/samtools-1.15.1/samtools fixmate -O sam --no-PG - - |
                     /builddir/build/BUILD/samtools-1.15.1/samtools sort    -O sam --no-PG -m 10M
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --hard-clip -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --strand -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --strand --filter-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --keep-tag --output-fmt=sam --strand --fail-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG  --keep-tag --output-fmt=sam --original -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip --no-PG  --keep-tag --output-fmt=sam --strand --both-ends -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/2_both_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --hard-clip -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --strand -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --strand --filter-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --keep-tag --output-fmt=sam --strand --fail-len 185 -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG  --keep-tag --output-fmt=sam --original -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG --output-fmt=sam -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_test_data.sam
.. ok

test_ampliconclip:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconclip -@ 2 --no-PG  --keep-tag --output-fmt=sam --strand --both-ends -b /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/2_both_test_data.sam
.. ok

test_ampliconstats:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconstats -@ 2 -S -t 50 -d 1,20,100 /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/ac_test.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_hard_clipped.expected.sam /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_soft_clipped.expected.sam /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/1_soft_clipped_strand.expected.sam /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/2_both_clipped.expected.sam | egrep -v 'Samtools version|Command line'
.. ok

test_ampliconstats:
	/builddir/build/BUILD/samtools-1.15.1/samtools ampliconstats -@ 2 -c 0 /builddir/build/BUILD/samtools-1.15.1/test/ampliconclip/multi_ref.bed /builddir/build/BUILD/samtools-1.15.1/test/ampliconstats/mixed_clipped.sam | egrep -v 'Samtools version|Command line'
.. ok


Number of tests:
    total            .. 807
    passed           .. 776
    failed           .. 0
    expected failure .. 31
    unexpected pass  .. 0

test/merge/test_bam_translate test/merge/test_bam_translate.tmp
test/merge/test_rtrans_build
test/merge/test_trans_tbl_init
cd test/mpileup && AWK="gawk" ../regression.sh mpileup.reg

=== Testing mpileup.reg regressions ===

EXPECTED FAIL: Task failed, but expected to fail;
when running $samtools mpileup -ABQ0 -a -l xx.bed3 xx#depth3.bam

Expected   passes:   118
Unexpected passes:   0
Expected   failures: 1
Unexpected failures: 0
=> PASS
cd test/mpileup && AWK="gawk" ../regression.sh depth.reg

=== Testing depth.reg regressions ===

EXPECTED FAIL: Task failed, but expected to fail;
when running $samtools depth -a -b xx.bed3 xx#depth3.bam

Expected   passes:   47
Unexpected passes:   0
Expected   failures: 1
Unexpected failures: 0
=> PASS
cd test/consensus && AWK="gawk" ../regression.sh consensus.reg

=== Testing consensus.reg regressions ===

Expected   passes:   62
Unexpected passes:   0
Expected   failures: 0
Unexpected failures: 0
=> PASS
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: samtools-1.15.1-1.fc38.ppc64le
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.8QkXA9
+ umask 022
+ cd /builddir/build/BUILD
+ cd samtools-1.15.1
+ DOCDIR=/builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/doc/samtools
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/doc/samtools
+ cp -pr AUTHORS /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/doc/samtools
+ cp -pr ChangeLog.old /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/doc/samtools
+ cp -pr NEWS /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/doc/samtools
+ cp -pr examples/ /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/doc/samtools
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.ICGsQ1
+ umask 022
+ cd /builddir/build/BUILD
+ cd samtools-1.15.1
+ LICENSEDIR=/builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/licenses/samtools
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/licenses/samtools
+ cp -pr LICENSE /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le/usr/share/licenses/samtools
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: samtools = 1.15.1-1.fc38 samtools(ppc-64) = 1.15.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/perl ld64.so.2()(64bit) ld64.so.2(GLIBC_2.23)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libhts.so.3()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libncursesw.so.6()(64bit) libtinfo.so.6()(64bit) libz.so.1()(64bit) rtld(GNU_HASH)
Processing files: samtools-debugsource-1.15.1-1.fc38.ppc64le
Provides: samtools-debugsource = 1.15.1-1.fc38 samtools-debugsource(ppc-64) = 1.15.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: samtools-debuginfo-1.15.1-1.fc38.ppc64le
Provides: debuginfo(build-id) = 01826cb3269a9b26821edc7a740f0b054a35fbb5 debuginfo(build-id) = 183555ead7d663404c269899ba7b23942bf4bbfd debuginfo(build-id) = 8e0ba6a14d12c4db30934b5aa7b4d62f1162a9c2 debuginfo(build-id) = c12d8acf116202ea4cb6cc345f5e311cae7f34dd debuginfo(build-id) = c2c46eb4e4d649614e83fe509f43bed784e999c8 debuginfo(build-id) = ddff380be18848c2aae591fd77690f314bff7188 debuginfo(build-id) = e7651b53c43d76314f34a8535d817cc15cc2af7e samtools-debuginfo = 1.15.1-1.fc38 samtools-debuginfo(ppc-64) = 1.15.1-1.fc38
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: samtools-debugsource(ppc-64) = 1.15.1-1.fc38
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le
Wrote: /builddir/build/RPMS/samtools-debuginfo-1.15.1-1.fc38.ppc64le.rpm
Wrote: /builddir/build/RPMS/samtools-1.15.1-1.fc38.ppc64le.rpm
Wrote: /builddir/build/RPMS/samtools-debugsource-1.15.1-1.fc38.ppc64le.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.jBrsKN
+ umask 022
+ cd /builddir/build/BUILD
+ cd samtools-1.15.1
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/samtools-1.15.1-1.fc38.ppc64le
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.BxtyPR
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf samtools-1.15.1 samtools-1.15.1.gemspec
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild samtools-1.15.1-1.fc38.src.rpm
Finish: build phase for samtools-1.15.1-1.fc38.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-ppc64le-1660573322.917606/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/samtools-1.15.1-1.fc38.src.rpm) Config(child) 3 minutes 30 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool