Warning: Permanently added '54.89.218.183' (ED25519) to the list of known hosts.
You can reproduce this build on your computer by running:
sudo dnf install copr-rpmbuild
/usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8069528-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64
Version: 0.73
PID: 16772
Logging PID: 16773
Task:
{'allow_user_ssh': False,
'appstream': False,
'background': False,
'build_id': 8069528,
'buildroot_pkgs': [],
'chroot': 'fedora-rawhide-aarch64',
'enable_net': False,
'fedora_review': False,
'git_hash': 'e2e043b5101c7827abb3a4f77c27677225b00ac1',
'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/ljavorsk/zlib-ng-rebase-fedora/bwa',
'isolation': 'default',
'memory_reqs': 2048,
'package_name': 'bwa',
'package_version': '0.7.17-14',
'project_dirname': 'zlib-ng-rebase-fedora',
'project_name': 'zlib-ng-rebase-fedora',
'project_owner': 'ljavorsk',
'repo_priority': None,
'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/ljavorsk/zlib-ng-rebase-fedora/fedora-rawhide-aarch64/',
'id': 'copr_base',
'name': 'Copr repository',
'priority': None}],
'sandbox': 'ljavorsk/zlib-ng-rebase-fedora--ljavorsk',
'source_json': {},
'source_type': None,
'ssh_public_keys': None,
'submitter': 'ljavorsk',
'tags': [],
'task_id': '8069528-fedora-rawhide-aarch64',
'timeout': 18000,
'uses_devel_repo': False,
'with_opts': [],
'without_opts': []}
Running: git clone https://copr-dist-git.fedorainfracloud.org/git/ljavorsk/zlib-ng-rebase-fedora/bwa /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa --depth 500 --no-single-branch --recursive
cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/ljavorsk/zlib-ng-rebase-fedora/bwa', '/var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout:
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa'...
Running: git checkout e2e043b5101c7827abb3a4f77c27677225b00ac1 --
cmd: ['git', 'checkout', 'e2e043b5101c7827abb3a4f77c27677225b00ac1', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa
rc: 0
stdout:
stderr: Note: switching to 'e2e043b5101c7827abb3a4f77c27677225b00ac1'.
You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.
If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:
git switch -c <new-branch-name>
Or undo this operation with:
git switch -
Turn off this advice by setting config variable advice.detachedHead to false
HEAD is now at e2e043b automatic import of bwa
Running: copr-distgit-client sources
cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa
rc: 0
stdout:
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading bwa-0.7.17.tar.bz2
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o bwa-0.7.17.tar.bz2 --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ljavorsk/zlib-ng-rebase-fedora/bwa/bwa-0.7.17.tar.bz2/md5/82cba7ef695538e6a38b9d4156837381/bwa-0.7.17.tar.bz2
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
100 186k 100 186k 0 0 9089k 0 --:--:-- --:--:-- --:--:-- 9321k
INFO: Reading stdout from command: md5sum bwa-0.7.17.tar.bz2
Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa/bwa.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1727277661.926377 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.6 starting (python version = 3.12.1, NVR = mock-5.6-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa/bwa.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1727277661.926377 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa/bwa.spec) Config(fedora-rawhide-aarch64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.6
INFO: Mock Version: 5.6
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1727277661.926377/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1727277661.926377/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/1811ac4ffde70d7a142f548fca08095e5cad67d5b02ca184b763d6c52a090186/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/1811ac4ffde70d7a142f548fca08095e5cad67d5b02ca184b763d6c52a090186/merged) with podman image umount
INFO: Package manager dnf5 detected and used (fallback)
INFO: Not updating bootstrap chroot, bootstrap_image_ready=True
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1727277661.926377/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf5 detected and used (direct choice)
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.19.94-1.fc42.aarch64
rpm-sequoia-1.7.0-2.fc41.aarch64
dnf5-5.2.6.2-1.fc42.aarch64
dnf5-plugins-5.2.6.2-1.fc42.aarch64
Start: installing minimal buildroot with dnf5
Updating and loading repositories:
fedora 100% | 89.2 KiB/s | 7.1 KiB | 00m00s
Copr repository 100% | 102.1 KiB/s | 1.5 KiB | 00m00s
Copr repository 100% | 18.9 MiB/s | 640.1 KiB | 00m00s
Repositories loaded.
Package Arch Version Repository Size
Installing group/module packages:
bash aarch64 5.2.32-2.fc42 fedora 8.3 MiB
bzip2 aarch64 1.0.8-19.fc41 fedora 427.6 KiB
coreutils aarch64 9.5-9.fc42 fedora 20.8 MiB
cpio aarch64 2.15-2.fc41 fedora 1.2 MiB
diffutils aarch64 3.10-8.fc41 fedora 2.1 MiB
fedora-release-common noarch 42-0.3 fedora 19.4 KiB
findutils aarch64 1:4.10.0-4.fc41 fedora 2.1 MiB
gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB
glibc-minimal-langpack aarch64 2.40.9000-1.fc42 fedora 0.0 B
grep aarch64 3.11-9.fc41 fedora 1.1 MiB
gzip aarch64 1.13-2.fc41 fedora 488.9 KiB
info aarch64 7.1.1-1.fc42 fedora 613.6 KiB
patch aarch64 2.7.6-25.fc41 fedora 390.6 KiB
redhat-rpm-config noarch 295-1.fc42 fedora 186.6 KiB
rpm-build aarch64 4.19.94-1.fc42 fedora 1.4 MiB
sed aarch64 4.9-3.fc41 fedora 1.0 MiB
shadow-utils aarch64 2:4.16.0-4.fc42 fedora 7.3 MiB
tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB
unzip aarch64 6.0-64.fc41 fedora 726.7 KiB
util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB
which aarch64 2.21-42.fc41 fedora 248.2 KiB
xz aarch64 1:5.6.2-2.fc41 fedora 1.5 MiB
Installing dependencies:
add-determinism aarch64 0.3.6-1.fc41 fedora 2.0 MiB
alternatives aarch64 1.30-1.fc41 fedora 218.3 KiB
ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB
audit-libs aarch64 4.0.2-1.fc41 fedora 547.4 KiB
authselect aarch64 1.5.0-7.fc41 fedora 309.5 KiB
authselect-libs aarch64 1.5.0-7.fc41 fedora 931.9 KiB
basesystem noarch 11-21.fc41 fedora 0.0 B
binutils aarch64 2.43.50-1.fc42 copr_base 32.7 MiB
build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B
bzip2-libs aarch64 1.0.8-19.fc41 fedora 200.7 KiB
ca-certificates noarch 2024.2.69_v8.0.401-1.fc42 fedora 2.6 MiB
coreutils-common aarch64 9.5-9.fc42 fedora 11.2 MiB
cracklib aarch64 2.9.11-6.fc41 fedora 935.0 KiB
crypto-policies noarch 20240828-1.git5f66e81.fc42 fedora 136.9 KiB
curl aarch64 8.10.1-1.fc42 fedora 581.3 KiB
cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB
debugedit aarch64 5.0-17.fc41 fedora 499.2 KiB
dwz aarch64 0.15-7.fc41 fedora 386.8 KiB
ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB
efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB
elfutils aarch64 0.191-8.fc41 fedora 4.9 MiB
elfutils-debuginfod-client aarch64 0.191-8.fc41 fedora 396.9 KiB
elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB
elfutils-libelf aarch64 0.191-8.fc41 fedora 1.3 MiB
elfutils-libs aarch64 0.191-8.fc41 fedora 938.3 KiB
fedora-gpg-keys noarch 42-0.2 fedora 126.4 KiB
fedora-release noarch 42-0.3 fedora 0.0 B
fedora-release-identity-basic noarch 42-0.3 fedora 694.0 B
fedora-repos noarch 42-0.2 fedora 4.9 KiB
fedora-repos-rawhide noarch 42-0.2 fedora 2.2 KiB
file aarch64 5.45-7.fc41 fedora 267.5 KiB
file-libs aarch64 5.45-7.fc41 fedora 10.0 MiB
filesystem aarch64 3.18-29.fc42 fedora 106.0 B
fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB
forge-srpm-macros noarch 0.3.2-1.fc41 fedora 39.0 KiB
fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B
gdb-minimal aarch64 15.1-2.fc42 fedora 13.0 MiB
gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB
gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB
ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B
glibc aarch64 2.40.9000-1.fc42 fedora 9.2 MiB
glibc-common aarch64 2.40.9000-1.fc42 fedora 2.6 MiB
glibc-gconv-extra aarch64 2.40.9000-1.fc42 fedora 49.2 MiB
gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB
gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB
go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB
jansson aarch64 2.13.1-10.fc41 fedora 220.5 KiB
kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB
keyutils-libs aarch64 1.6.3-4.fc41 fedora 226.4 KiB
krb5-libs aarch64 1.21.3-2.fc41 fedora 3.3 MiB
libacl aarch64 2.3.2-2.fc41 fedora 196.1 KiB
libarchive aarch64 3.7.6-1.fc42 fedora 974.8 KiB
libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB
libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB
libbrotli aarch64 1.1.0-5.fc41 fedora 1.1 MiB
libcap aarch64 2.70-4.fc41 fedora 1.4 MiB
libcap-ng aarch64 0.8.5-3.fc41 fedora 417.2 KiB
libcom_err aarch64 1.47.1-3.fc41 fedora 239.3 KiB
libcurl aarch64 8.10.1-1.fc42 fedora 858.4 KiB
libeconf aarch64 0.6.2-3.fc41 fedora 206.1 KiB
libevent aarch64 2.1.12-14.fc41 fedora 1.5 MiB
libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB
libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB
libgcc aarch64 14.2.1-3.fc42 fedora 350.2 KiB
libgomp aarch64 14.2.1-3.fc42 fedora 567.3 KiB
libidn2 aarch64 2.3.7-2.fc41 fedora 457.2 KiB
libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB
libnghttp2 aarch64 1.63.0-1.fc42 fedora 262.2 KiB
libnsl2 aarch64 2.0.1-2.fc41 fedora 222.0 KiB
libpkgconf aarch64 2.3.0-1.fc42 fedora 198.1 KiB
libpsl aarch64 0.21.5-4.fc41 fedora 196.6 KiB
libpwquality aarch64 1.4.5-11.fc41 fedora 1.1 MiB
libselinux aarch64 3.7-6.fc42 fedora 265.1 KiB
libsemanage aarch64 3.7-3.fc42 fedora 361.6 KiB
libsepol aarch64 3.7-3.fc42 fedora 873.9 KiB
libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB
libssh aarch64 0.11.1-1.fc42 fedora 649.6 KiB
libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B
libstdc++ aarch64 14.2.1-3.fc42 fedora 2.8 MiB
libtasn1 aarch64 4.19.0-9.fc41 fedora 283.8 KiB
libtirpc aarch64 1.3.5-0.fc41 fedora 274.8 KiB
libtool-ltdl aarch64 2.4.7-12.fc41 fedora 222.2 KiB
libunistring aarch64 1.1-8.fc41 fedora 1.8 MiB
libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB
libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB
libxcrypt aarch64 4.4.36-7.fc41 fedora 399.0 KiB
libxml2 aarch64 2.12.8-2.fc41 fedora 2.1 MiB
libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB
lua-libs aarch64 5.4.6-6.fc41 fedora 393.1 KiB
lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB
lz4-libs aarch64 1.10.0-1.fc41 fedora 261.6 KiB
mpfr aarch64 4.2.1-5.fc41 fedora 818.9 KiB
ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB
ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB
ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB
openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B
openldap aarch64 2.6.8-5.fc41 fedora 952.3 KiB
openssl-libs aarch64 1:3.2.2-8.fc42 fedora 7.2 MiB
p11-kit aarch64 0.25.5-3.fc41 fedora 2.6 MiB
p11-kit-trust aarch64 0.25.5-3.fc41 fedora 655.6 KiB
package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB
pam aarch64 1.6.1-6.fc42 fedora 11.0 MiB
pam-libs aarch64 1.6.1-6.fc42 fedora 607.3 KiB
pcre2 aarch64 10.44-1.fc41.1 fedora 905.5 KiB
pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB
perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B
pkgconf aarch64 2.3.0-1.fc42 fedora 240.6 KiB
pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB
pkgconf-pkg-config aarch64 2.3.0-1.fc42 fedora 990.0 B
popt aarch64 1.19-7.fc41 fedora 272.9 KiB
publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB
pyproject-srpm-macros noarch 1.15.0-1.fc42 fedora 1.9 KiB
python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB
qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B
qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B
readline aarch64 8.2-11.fc42 fedora 753.3 KiB
rpm aarch64 4.19.94-1.fc42 fedora 3.9 MiB
rpm-build-libs aarch64 4.19.94-1.fc42 fedora 262.7 KiB
rpm-libs aarch64 4.19.94-1.fc42 fedora 798.0 KiB
rpm-sequoia aarch64 1.7.0-2.fc41 fedora 2.3 MiB
rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB
setup noarch 2.15.0-5.fc41 fedora 720.7 KiB
sqlite-libs aarch64 3.46.0-4.fc41 fedora 1.6 MiB
systemd-libs aarch64 256.5-1.fc42 fedora 2.5 MiB
util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB
xxhash-libs aarch64 0.8.2-3.fc41 fedora 212.3 KiB
xz-libs aarch64 1:5.6.2-2.fc41 fedora 266.4 KiB
zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB
zip aarch64 3.0-41.fc41 fedora 1.1 MiB
zlib-ng-compat aarch64 2.2.2-1.fc42 copr_base 197.6 KiB
zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB
Installing groups:
Buildsystem building group
Transaction Summary:
Installing: 153 packages
Total size of inbound packages is 53 MiB. Need to download 0 B.
After this operation, 303 MiB extra will be used (install 303 MiB, remove 0 B).
[1/1] tar-2:1.35-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/2] bzip2-0:1.0.8-19.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/3] redhat-rpm-config-0:295-1.fc42.no 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/4] rpm-build-0:4.19.94-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/5] unzip-0:6.0-64.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[5/5] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/6] cpio-0:2.15-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[6/6] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/7] which-0:2.21-42.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[7/7] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/8] bash-0:5.2.32-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[8/8] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/9] coreutils-0:9.5-9.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[9/9] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/10] grep-0:3.11-9.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[10/10] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/11] patch-0:2.7.6-25.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[11/11] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/12] sed-0:4.9-3.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[12/12] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/13] shadow-utils-2:4.16.0-4.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[13/13] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/14] util-linux-0:2.40.2-8.fc42.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[14/14] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/15] diffutils-0:3.10-8.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[15/15] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/16] fedora-release-common-0:42-0.3. 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[16/16] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/17] findutils-1:4.10.0-4.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[17/17] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/18] gawk-0:5.3.0-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/19] glibc-minimal-langpack-0:2.40.9 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/20] gzip-0:1.13-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/21] info-0:7.1.1-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[21/21] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/22] xz-1:5.6.2-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/23] glibc-0:2.40.9000-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/24] libacl-0:2.3.2-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/25] libselinux-0:3.7-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/26] bzip2-libs-0:1.0.8-19.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/27] ansible-srpm-macros-0:1-16.fc41 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/28] build-reproducibility-srpm-macr 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/29] dwz-0:0.15-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/30] efi-srpm-macros-0:5-12.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/31] file-0:5.45-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/32] fonts-srpm-macros-1:2.0.5-17.fc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/33] forge-srpm-macros-0:0.3.2-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/34] fpc-srpm-macros-0:1.3-13.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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>>> Already downloaded
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[ 1/36] gnat-srpm-macros-0:6-6.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/37] go-srpm-macros-0:3.6.0-3.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[37/37] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/38] kernel-srpm-macros-0:1.0-24.fc4 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/39] lua-srpm-macros-0:1-14.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/40] ocaml-srpm-macros-0:10-3.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/41] openblas-srpm-macros-0:2-18.fc4 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/42] package-notes-srpm-macros-0:0.5 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/43] perl-srpm-macros-0:1-56.fc41.no 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/44] pyproject-srpm-macros-0:1.15.0- 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/45] python-srpm-macros-0:3.13-3.fc4 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/46] qt5-srpm-macros-0:5.15.15-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/47] qt6-srpm-macros-0:6.7.2-3.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[47/47] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/48] rpm-0:4.19.94-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/49] rust-srpm-macros-0:26.3-3.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/50] zig-srpm-macros-0:1-3.fc41.noar 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[50/50] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/51] zip-0:3.0-41.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[51/51] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/52] debugedit-0:5.0-17.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/53] elfutils-0:0.191-8.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[53/53] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/54] elfutils-libelf-0:0.191-8.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/55] libarchive-0:3.7.6-1.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/56] pkgconf-pkg-config-0:2.3.0-1.fc 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/57] popt-0:1.19-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/58] readline-0:8.2-11.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/59] rpm-build-libs-0:4.19.94-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/60] rpm-libs-0:4.19.94-1.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/61] zstd-0:1.5.6-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/62] filesystem-0:3.18-29.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/63] ncurses-libs-0:6.5-2.20240629.f 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/64] coreutils-common-0:9.5-9.fc42.a 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/65] gmp-1:6.3.0-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/66] libattr-0:2.5.2-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/67] libcap-0:2.70-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/68] openssl-libs-1:3.2.2-8.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/69] systemd-libs-0:256.5-1.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/70] pcre2-0:10.44-1.fc41.1.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/71] ed-0:1.20.2-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/72] audit-libs-0:4.0.2-1.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/73] libeconf-0:0.6.2-3.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/74] libsemanage-0:3.7-3.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/75] libxcrypt-0:4.4.36-7.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/76] pam-libs-0:1.6.1-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/77] setup-0:2.15.0-5.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/78] authselect-libs-0:1.5.0-7.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/79] libblkid-0:2.40.2-8.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/80] libcap-ng-0:0.8.5-3.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/81] libfdisk-0:2.40.2-8.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/82] libmount-0:2.40.2-8.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/83] libsmartcols-0:2.40.2-8.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/84] libuuid-0:2.40.2-8.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/85] pam-0:1.6.1-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/86] util-linux-core-0:2.40.2-8.fc42 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/87] fedora-repos-0:42-0.2.noarch 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/88] mpfr-0:4.2.1-5.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/89] glibc-common-0:2.40.9000-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/90] xz-libs-1:5.6.2-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/91] glibc-gconv-extra-0:2.40.9000-1 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/92] basesystem-0:11-21.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/93] libgcc-0:14.2.1-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/94] libsepol-0:3.7-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/95] add-determinism-0:0.3.6-1.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/96] file-libs-0:5.45-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/97] curl-0:8.10.1-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/98] elfutils-libs-0:0.191-8.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/99] elfutils-debuginfod-client-0:0. 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/100] libstdc++-0:14.2.1-3.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/101] libzstd-0:1.5.6-2.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/102] libxml2-0:2.12.8-2.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/103] lz4-libs-0:1.10.0-1.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/104] pkgconf-0:2.3.0-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/105] pkgconf-m4-0:2.3.0-1.fc42.noa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/106] libgomp-0:14.2.1-3.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/107] lua-libs-0:5.4.6-6.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/108] rpm-sequoia-0:1.7.0-2.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/109] sqlite-libs-0:3.46.0-4.fc41.a 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/110] ncurses-base-0:6.5-2.20240629 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/111] ca-certificates-0:2024.2.69_v 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/112] crypto-policies-0:20240828-1. 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/113] pcre2-syntax-0:10.44-1.fc41.1 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/114] authselect-0:1.5.0-7.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/115] gdbm-1:1.23-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/116] gdbm-libs-1:1.23-7.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/117] libnsl2-0:2.0.1-2.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/118] libpwquality-0:1.4.5-11.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/119] libtirpc-0:1.3.5-0.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/120] fedora-gpg-keys-0:42-0.2.noar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/121] fedora-repos-rawhide-0:42-0.2 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[121/121] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[ 1/122] elfutils-default-yama-scope-0 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/123] libpkgconf-0:2.3.0-1.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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[ 1/124] libffi-0:3.4.6-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/125] p11-kit-0:0.25.5-3.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/126] p11-kit-trust-0:0.25.5-3.fc41 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/127] cracklib-0:2.9.11-6.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/128] krb5-libs-0:1.21.3-2.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/129] libcom_err-0:1.47.1-3.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/130] libtasn1-0:4.19.0-9.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/131] alternatives-0:1.30-1.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/132] keyutils-libs-0:1.6.3-4.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/133] libverto-0:0.3.2-9.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/134] zlib-ng-compat-0:2.2.2-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/135] binutils-0:2.43.50-1.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/136] jansson-0:2.13.1-10.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/137] fedora-release-0:42-0.3.noarc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/138] gdb-minimal-0:15.1-2.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/139] xxhash-libs-0:0.8.2-3.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/140] fedora-release-identity-basic 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/141] libcurl-0:8.10.1-1.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/142] libbrotli-0:1.1.0-5.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/143] libidn2-0:2.3.7-2.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/144] libnghttp2-0:1.63.0-1.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/145] libpsl-0:0.21.5-4.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/146] libssh-0:0.11.1-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/147] openldap-0:2.6.8-5.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/148] libunistring-0:1.1-8.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/149] publicsuffix-list-dafsa-0:202 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/150] libssh-config-0:0.11.1-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/151] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/152] libevent-0:2.1.12-14.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s
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[ 1/153] libtool-ltdl-0:2.4.7-12.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s
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Running transaction
Importing PGP key 0x105EF944:
UserID : "Fedora (42) <fedora-42-primary@fedoraproject.org>"
Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary
The key was successfully imported.
Importing PGP key 0x105EF944:
UserID : "Fedora (42) <fedora-42-primary@fedoraproject.org>"
Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary
The key was successfully imported.
Importing PGP key 0xE99D6AD1:
UserID : "Fedora (41) <fedora-41-primary@fedoraproject.org>"
Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary
The key was successfully imported.
Importing PGP key 0x31645531:
UserID : "Fedora (43) <fedora-43-primary@fedoraproject.org>"
Fingerprint: C6E7F081CF80E13146676E88829B606631645531
From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary
The key was successfully imported.
[ 1/155] Verify package files 100% | 689.0 B/s | 153.0 B | 00m00s
[ 2/155] Prepare transaction 100% | 2.4 KiB/s | 153.0 B | 00m00s
[ 3/155] Installing libgcc-0:14.2.1-3. 100% | 171.8 MiB/s | 351.9 KiB | 00m00s
[ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s
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warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[ 19/155] Installing glibc-0:2.40.9000- 100% | 237.5 MiB/s | 9.3 MiB | 00m00s
[ 20/155] Installing bash-0:5.2.32-2.fc 100% | 286.6 MiB/s | 8.3 MiB | 00m00s
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warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[ 22/155] Installing glibc-gconv-extra- 100% | 529.7 MiB/s | 49.3 MiB | 00m00s
[ 23/155] Installing zlib-ng-compat-0:2 100% | 193.8 MiB/s | 198.5 KiB | 00m00s
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[ 42/155] Installing unzip-0:6.0-64.fc4 100% | 237.7 MiB/s | 730.2 KiB | 00m00s
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[ 58/155] Installing findutils-1:4.10.0 100% | 234.2 MiB/s | 2.1 MiB | 00m00s
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[ 62/155] Installing libffi-0:3.4.6-3.f 100% | 277.2 MiB/s | 283.8 KiB | 00m00s
[ 63/155] Installing libcom_err-0:1.47. 100% | 234.8 MiB/s | 240.4 KiB | 00m00s
[ 64/155] Installing libtasn1-0:4.19.0- 100% | 139.4 MiB/s | 285.6 KiB | 00m00s
[ 65/155] Installing p11-kit-0:0.25.5-3 100% | 203.6 MiB/s | 2.6 MiB | 00m00s
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[ 67/155] Installing libunistring-0:1.1 100% | 301.5 MiB/s | 1.8 MiB | 00m00s
[ 68/155] Installing libidn2-0:2.3.7-2. 100% | 113.1 MiB/s | 463.1 KiB | 00m00s
[ 69/155] Installing libpsl-0:0.21.5-4. 100% | 193.1 MiB/s | 197.7 KiB | 00m00s
[ 70/155] Installing p11-kit-trust-0:0. 100% | 64.2 MiB/s | 657.4 KiB | 00m00s
[ 71/155] Installing zstd-0:1.5.6-2.fc4 100% | 241.6 MiB/s | 1.7 MiB | 00m00s
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[ 77/155] Installing gdbm-1:1.23-7.fc41 100% | 227.9 MiB/s | 933.4 KiB | 00m00s
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[ 94/155] Installing keyutils-libs-0:1. 100% | 222.5 MiB/s | 227.9 KiB | 00m00s
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[116/155] Installing libssh-0:0.11.1-1. 100% | 212.1 MiB/s | 651.7 KiB | 00m00s
[117/155] Installing rpm-sequoia-0:1.7. 100% | 287.1 MiB/s | 2.3 MiB | 00m00s
[118/155] Installing rpm-libs-0:4.19.94 100% | 195.2 MiB/s | 799.5 KiB | 00m00s
[119/155] Installing rpm-build-libs-0:4 100% | 128.7 MiB/s | 263.6 KiB | 00m00s
[120/155] Installing libevent-0:2.1.12- 100% | 304.7 MiB/s | 1.5 MiB | 00m00s
[121/155] Installing openldap-0:2.6.8-5 100% | 233.4 MiB/s | 956.1 KiB | 00m00s
[122/155] Installing libcurl-0:8.10.1-1 100% | 209.8 MiB/s | 859.5 KiB | 00m00s
[123/155] Installing elfutils-debuginfo 100% | 194.8 MiB/s | 398.9 KiB | 00m00s
[124/155] Installing elfutils-0:0.191-8 100% | 381.1 MiB/s | 5.0 MiB | 00m00s
[125/155] Installing binutils-0:2.43.50 100% | 321.0 MiB/s | 32.7 MiB | 00m00s
[126/155] Installing gdb-minimal-0:15.1 100% | 288.4 MiB/s | 13.0 MiB | 00m00s
[127/155] Installing debugedit-0:5.0-17 100% | 163.4 MiB/s | 502.0 KiB | 00m00s
[128/155] Installing curl-0:8.10.1-1.fc 100% | 43.9 MiB/s | 583.8 KiB | 00m00s
[129/155] Installing rpm-0:4.19.94-1.fc 100% | 134.3 MiB/s | 3.4 MiB | 00m00s
[130/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s
[131/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s
[132/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s
[133/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s
[134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s
[135/155] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s
[136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s
[137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s
[138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s
[139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s
[140/155] Installing kernel-srpm-macros 100% | 2.3 MiB/s | 2.3 KiB | 00m00s
[141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s
[142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s
[143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s
[144/155] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s
[145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s
[146/155] Installing forge-srpm-macros- 100% | 39.4 MiB/s | 40.4 KiB | 00m00s
[147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s
[148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s
[149/155] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s
[150/155] Installing rpm-build-0:4.19.9 100% | 279.4 MiB/s | 1.4 MiB | 00m00s
[151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s
[152/155] Installing util-linux-0:2.40. 100% | 346.0 MiB/s | 17.0 MiB | 00m00s
[153/155] Installing authselect-0:1.5.0 100% | 76.6 MiB/s | 313.9 KiB | 00m00s
[154/155] Installing which-0:2.21-42.fc 100% | 122.2 MiB/s | 250.4 KiB | 00m00s
warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[155/155] Installing info-0:7.1.1-1.fc4 100% | 256.4 KiB/s | 614.1 KiB | 00m02s
Warning: skipped PGP checks for 2 packages from repository: copr_base
Complete!
Finish: installing minimal buildroot with dnf5
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: add-determinism-0.3.6-1.fc41.aarch64
alternatives-1.30-1.fc41.aarch64
ansible-srpm-macros-1-16.fc41.noarch
audit-libs-4.0.2-1.fc41.aarch64
authselect-1.5.0-7.fc41.aarch64
authselect-libs-1.5.0-7.fc41.aarch64
basesystem-11-21.fc41.noarch
bash-5.2.32-2.fc42.aarch64
binutils-2.43.50-1.fc42.aarch64
build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch
bzip2-1.0.8-19.fc41.aarch64
bzip2-libs-1.0.8-19.fc41.aarch64
ca-certificates-2024.2.69_v8.0.401-1.fc42.noarch
coreutils-9.5-9.fc42.aarch64
coreutils-common-9.5-9.fc42.aarch64
cpio-2.15-2.fc41.aarch64
cracklib-2.9.11-6.fc41.aarch64
crypto-policies-20240828-1.git5f66e81.fc42.noarch
curl-8.10.1-1.fc42.aarch64
cyrus-sasl-lib-2.1.28-27.fc41.aarch64
debugedit-5.0-17.fc41.aarch64
diffutils-3.10-8.fc41.aarch64
dwz-0.15-7.fc41.aarch64
ed-1.20.2-2.fc41.aarch64
efi-srpm-macros-5-12.fc41.noarch
elfutils-0.191-8.fc41.aarch64
elfutils-debuginfod-client-0.191-8.fc41.aarch64
elfutils-default-yama-scope-0.191-8.fc41.noarch
elfutils-libelf-0.191-8.fc41.aarch64
elfutils-libs-0.191-8.fc41.aarch64
fedora-gpg-keys-42-0.2.noarch
fedora-release-42-0.3.noarch
fedora-release-common-42-0.3.noarch
fedora-release-identity-basic-42-0.3.noarch
fedora-repos-42-0.2.noarch
fedora-repos-rawhide-42-0.2.noarch
file-5.45-7.fc41.aarch64
file-libs-5.45-7.fc41.aarch64
filesystem-3.18-29.fc42.aarch64
findutils-4.10.0-4.fc41.aarch64
fonts-srpm-macros-2.0.5-17.fc41.noarch
forge-srpm-macros-0.3.2-1.fc41.noarch
fpc-srpm-macros-1.3-13.fc41.noarch
gawk-5.3.0-4.fc41.aarch64
gdb-minimal-15.1-2.fc42.aarch64
gdbm-1.23-7.fc41.aarch64
gdbm-libs-1.23-7.fc41.aarch64
ghc-srpm-macros-1.9.2-1.fc42.noarch
glibc-2.40.9000-1.fc42.aarch64
glibc-common-2.40.9000-1.fc42.aarch64
glibc-gconv-extra-2.40.9000-1.fc42.aarch64
glibc-minimal-langpack-2.40.9000-1.fc42.aarch64
gmp-6.3.0-2.fc41.aarch64
gnat-srpm-macros-6-6.fc41.noarch
go-srpm-macros-3.6.0-3.fc41.noarch
gpg-pubkey-105ef944-65ca83d1
gpg-pubkey-31645531-66b6dccf
gpg-pubkey-e99d6ad1-64d2612c
grep-3.11-9.fc41.aarch64
gzip-1.13-2.fc41.aarch64
info-7.1.1-1.fc42.aarch64
jansson-2.13.1-10.fc41.aarch64
kernel-srpm-macros-1.0-24.fc41.noarch
keyutils-libs-1.6.3-4.fc41.aarch64
krb5-libs-1.21.3-2.fc41.aarch64
libacl-2.3.2-2.fc41.aarch64
libarchive-3.7.6-1.fc42.aarch64
libattr-2.5.2-4.fc41.aarch64
libblkid-2.40.2-8.fc42.aarch64
libbrotli-1.1.0-5.fc41.aarch64
libcap-2.70-4.fc41.aarch64
libcap-ng-0.8.5-3.fc41.aarch64
libcom_err-1.47.1-3.fc41.aarch64
libcurl-8.10.1-1.fc42.aarch64
libeconf-0.6.2-3.fc41.aarch64
libevent-2.1.12-14.fc41.aarch64
libfdisk-2.40.2-8.fc42.aarch64
libffi-3.4.6-3.fc42.aarch64
libgcc-14.2.1-3.fc42.aarch64
libgomp-14.2.1-3.fc42.aarch64
libidn2-2.3.7-2.fc41.aarch64
libmount-2.40.2-8.fc42.aarch64
libnghttp2-1.63.0-1.fc42.aarch64
libnsl2-2.0.1-2.fc41.aarch64
libpkgconf-2.3.0-1.fc42.aarch64
libpsl-0.21.5-4.fc41.aarch64
libpwquality-1.4.5-11.fc41.aarch64
libselinux-3.7-6.fc42.aarch64
libsemanage-3.7-3.fc42.aarch64
libsepol-3.7-3.fc42.aarch64
libsmartcols-2.40.2-8.fc42.aarch64
libssh-0.11.1-1.fc42.aarch64
libssh-config-0.11.1-1.fc42.noarch
libstdc++-14.2.1-3.fc42.aarch64
libtasn1-4.19.0-9.fc41.aarch64
libtirpc-1.3.5-0.fc41.aarch64
libtool-ltdl-2.4.7-12.fc41.aarch64
libunistring-1.1-8.fc41.aarch64
libuuid-2.40.2-8.fc42.aarch64
libverto-0.3.2-9.fc41.aarch64
libxcrypt-4.4.36-7.fc41.aarch64
libxml2-2.12.8-2.fc41.aarch64
libzstd-1.5.6-2.fc41.aarch64
lua-libs-5.4.6-6.fc41.aarch64
lua-srpm-macros-1-14.fc41.noarch
lz4-libs-1.10.0-1.fc41.aarch64
mpfr-4.2.1-5.fc41.aarch64
ncurses-base-6.5-2.20240629.fc41.noarch
ncurses-libs-6.5-2.20240629.fc41.aarch64
ocaml-srpm-macros-10-3.fc41.noarch
openblas-srpm-macros-2-18.fc41.noarch
openldap-2.6.8-5.fc41.aarch64
openssl-libs-3.2.2-8.fc42.aarch64
p11-kit-0.25.5-3.fc41.aarch64
p11-kit-trust-0.25.5-3.fc41.aarch64
package-notes-srpm-macros-0.5-12.fc41.noarch
pam-1.6.1-6.fc42.aarch64
pam-libs-1.6.1-6.fc42.aarch64
patch-2.7.6-25.fc41.aarch64
pcre2-10.44-1.fc41.1.aarch64
pcre2-syntax-10.44-1.fc41.1.noarch
perl-srpm-macros-1-56.fc41.noarch
pkgconf-2.3.0-1.fc42.aarch64
pkgconf-m4-2.3.0-1.fc42.noarch
pkgconf-pkg-config-2.3.0-1.fc42.aarch64
popt-1.19-7.fc41.aarch64
publicsuffix-list-dafsa-20240107-4.fc41.noarch
pyproject-srpm-macros-1.15.0-1.fc42.noarch
python-srpm-macros-3.13-3.fc41.noarch
qt5-srpm-macros-5.15.15-1.fc42.noarch
qt6-srpm-macros-6.7.2-3.fc41.noarch
readline-8.2-11.fc42.aarch64
redhat-rpm-config-295-1.fc42.noarch
rpm-4.19.94-1.fc42.aarch64
rpm-build-4.19.94-1.fc42.aarch64
rpm-build-libs-4.19.94-1.fc42.aarch64
rpm-libs-4.19.94-1.fc42.aarch64
rpm-sequoia-1.7.0-2.fc41.aarch64
rust-srpm-macros-26.3-3.fc42.noarch
sed-4.9-3.fc41.aarch64
setup-2.15.0-5.fc41.noarch
shadow-utils-4.16.0-4.fc42.aarch64
sqlite-libs-3.46.0-4.fc41.aarch64
systemd-libs-256.5-1.fc42.aarch64
tar-1.35-4.fc41.aarch64
unzip-6.0-64.fc41.aarch64
util-linux-2.40.2-8.fc42.aarch64
util-linux-core-2.40.2-8.fc42.aarch64
which-2.21-42.fc41.aarch64
xxhash-libs-0.8.2-3.fc41.aarch64
xz-5.6.2-2.fc41.aarch64
xz-libs-5.6.2-2.fc41.aarch64
zig-srpm-macros-1-3.fc41.noarch
zip-3.0-41.fc41.aarch64
zlib-ng-compat-2.2.2-1.fc42.aarch64
zstd-1.5.6-2.fc41.aarch64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1722211200
Wrote: /builddir/build/SRPMS/bwa-0.7.17-14.fc42.src.rpm
Finish: rpmbuild -bs
cp: preserving permissions for ‘/var/lib/copr-rpmbuild/results/chroot_scan/var/lib/mock/fedora-rawhide-aarch64-1727277661.926377/root/var/log’: No such file or directory
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1727277661.926377/root/var/log/dnf5.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-lbvynh2b/bwa/bwa.spec) Config(child) 0 minutes 14 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/bwa-0.7.17-14.fc42.src.rpm) Config(fedora-rawhide-aarch64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1727277661.926377/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1727277661.926377/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1727277661.926377/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
rpm-4.19.94-1.fc42.aarch64
rpm-sequoia-1.7.0-2.fc41.aarch64
dnf5-5.2.6.2-1.fc42.aarch64
dnf5-plugins-5.2.6.2-1.fc42.aarch64
Finish: chroot init
Start: build phase for bwa-0.7.17-14.fc42.src.rpm
Start: build setup for bwa-0.7.17-14.fc42.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1722211200
Wrote: /builddir/build/SRPMS/bwa-0.7.17-14.fc42.src.rpm
Updating and loading repositories:
fedora 100% | 158.6 KiB/s | 7.1 KiB | 00m00s
Copr repository 100% | 117.8 KiB/s | 1.5 KiB | 00m00s
Repositories loaded.
Package Arch Version Repository Size
Installing:
gcc aarch64 14.2.1-3.fc42 fedora 93.8 MiB
make aarch64 1:4.4.1-8.fc41 fedora 1.8 MiB
perl-generators noarch 1.16-6.fc41 fedora 21.8 KiB
simde-devel noarch 0.8.2-2.fc42 fedora 7.9 MiB
zlib-ng-compat-devel aarch64 2.2.2-1.fc42 copr_base 106.8 KiB
Installing dependencies:
annobin-docs noarch 12.70-1.fc42 fedora 97.7 KiB
annobin-plugin-gcc aarch64 12.70-1.fc42 fedora 1.1 MiB
cmake-filesystem aarch64 3.28.3-7.fc41 fedora 0.0 B
cpp aarch64 14.2.1-3.fc42 fedora 31.8 MiB
gcc-plugin-annobin aarch64 14.2.1-3.fc42 fedora 197.1 KiB
glibc-devel aarch64 2.40.9000-1.fc42 fedora 2.2 MiB
groff-base aarch64 1.23.0-7.fc41 fedora 5.2 MiB
hedley-devel noarch 15-24.fc41 fedora 86.8 KiB
kernel-headers aarch64 6.11.0-63.fc42 fedora 6.3 MiB
libasan aarch64 14.2.1-3.fc42 fedora 1.6 MiB
libatomic aarch64 14.2.1-3.fc42 fedora 196.9 KiB
libmpc aarch64 1.3.1-6.fc41 fedora 280.8 KiB
libubsan aarch64 14.2.1-3.fc42 fedora 539.3 KiB
libxcrypt-devel aarch64 4.4.36-7.fc41 fedora 30.3 KiB
ncurses aarch64 6.5-2.20240629.fc41 fedora 1.7 MiB
perl-AutoLoader noarch 5.74-511.fc41 fedora 20.5 KiB
perl-B aarch64 1.89-511.fc41 fedora 606.1 KiB
perl-Carp noarch 1.54-511.fc41 fedora 46.6 KiB
perl-Class-Struct noarch 0.68-511.fc41 fedora 25.4 KiB
perl-Data-Dumper aarch64 2.189-512.fc41 fedora 263.8 KiB
perl-Digest noarch 1.20-511.fc41 fedora 35.3 KiB
perl-Digest-MD5 aarch64 2.59-5.fc41 fedora 231.9 KiB
perl-DynaLoader aarch64 1.56-511.fc41 fedora 32.1 KiB
perl-Encode aarch64 4:3.21-511.fc41 fedora 5.9 MiB
perl-Errno aarch64 1.38-511.fc41 fedora 8.4 KiB
perl-Exporter noarch 5.78-511.fc41 fedora 54.3 KiB
perl-Fcntl aarch64 1.18-511.fc41 fedora 221.1 KiB
perl-Fedora-VSP noarch 0.001-35.fc41 fedora 39.7 KiB
perl-File-Basename noarch 2.86-511.fc41 fedora 14.0 KiB
perl-File-Path noarch 2.18-511.fc41 fedora 63.5 KiB
perl-File-Temp noarch 1:0.231.100-511.fc41 fedora 162.3 KiB
perl-File-stat noarch 1.14-511.fc41 fedora 12.5 KiB
perl-FileHandle noarch 2.05-511.fc41 fedora 9.3 KiB
perl-Getopt-Long noarch 1:2.58-2.fc41 fedora 144.5 KiB
perl-Getopt-Std noarch 1.14-511.fc41 fedora 11.2 KiB
perl-HTTP-Tiny noarch 0.088-512.fc41 fedora 152.2 KiB
perl-IO aarch64 1.55-511.fc41 fedora 319.2 KiB
perl-IO-Socket-IP noarch 0.42-512.fc41 fedora 98.7 KiB
perl-IO-Socket-SSL noarch 2.089-1.fc42 fedora 703.3 KiB
perl-IPC-Open3 noarch 1.22-511.fc41 fedora 22.5 KiB
perl-MIME-Base32 noarch 1.303-21.fc41 fedora 30.7 KiB
perl-MIME-Base64 aarch64 3.16-511.fc41 fedora 222.2 KiB
perl-Mozilla-CA noarch 20240730-1.fc41 fedora 9.8 KiB
perl-Net-SSLeay aarch64 1.94-7.fc41 fedora 1.4 MiB
perl-POSIX aarch64 2.20-511.fc41 fedora 327.3 KiB
perl-PathTools aarch64 3.91-511.fc41 fedora 352.1 KiB
perl-Pod-Escapes noarch 1:1.07-511.fc41 fedora 24.9 KiB
perl-Pod-Perldoc noarch 3.28.01-512.fc41 fedora 163.7 KiB
perl-Pod-Simple noarch 1:3.45-511.fc41 fedora 560.9 KiB
perl-Pod-Usage noarch 4:2.03-511.fc41 fedora 84.8 KiB
perl-Scalar-List-Utils aarch64 5:1.66-1.fc42 fedora 278.7 KiB
perl-SelectSaver noarch 1.02-511.fc41 fedora 2.2 KiB
perl-Socket aarch64 4:2.038-511.fc41 fedora 272.1 KiB
perl-Storable aarch64 1:3.32-511.fc41 fedora 372.5 KiB
perl-Symbol noarch 1.09-511.fc41 fedora 6.8 KiB
perl-Term-ANSIColor noarch 5.01-512.fc41 fedora 97.5 KiB
perl-Term-Cap noarch 1.18-511.fc41 fedora 29.3 KiB
perl-Text-ParseWords noarch 3.31-511.fc41 fedora 13.6 KiB
perl-Text-Tabs+Wrap noarch 2024.001-511.fc41 fedora 22.6 KiB
perl-Time-Local noarch 2:1.350-511.fc41 fedora 69.0 KiB
perl-URI noarch 5.29-1.fc42 fedora 251.9 KiB
perl-base noarch 2.27-511.fc41 fedora 12.5 KiB
perl-constant noarch 1.33-512.fc41 fedora 26.2 KiB
perl-if noarch 0.61.000-511.fc41 fedora 5.8 KiB
perl-interpreter aarch64 4:5.40.0-511.fc41 fedora 302.3 KiB
perl-libnet noarch 3.15-512.fc41 fedora 289.4 KiB
perl-libs aarch64 4:5.40.0-511.fc41 fedora 10.9 MiB
perl-locale noarch 1.12-511.fc41 fedora 6.5 KiB
perl-macros noarch 4:5.40.0-511.fc41 fedora 5.5 KiB
perl-mro aarch64 1.29-511.fc41 fedora 209.7 KiB
perl-overload noarch 1.37-511.fc41 fedora 71.5 KiB
perl-overloading noarch 0.02-511.fc41 fedora 4.8 KiB
perl-parent noarch 1:0.242-1.fc42 fedora 10.0 KiB
perl-podlators noarch 1:6.0.2-2.fc41 fedora 317.5 KiB
perl-vars noarch 1.05-511.fc41 fedora 3.9 KiB
Transaction Summary:
Installing: 80 packages
Total size of inbound packages is 58 MiB. Need to download 9 MiB.
After this operation, 181 MiB extra will be used (install 181 MiB, remove 0 B).
[1/1] gcc-0:14.2.1-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
--------------------------------------------------------------------------------
[1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/2] make-1:4.4.1-8.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
--------------------------------------------------------------------------------
[2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s
[1/5] zlib-ng-compat-devel-0:2.2.2-1.fc 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
[2/6] cpp-0:14.2.1-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s
>>> Already downloaded
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--------------------------------------------------------------------------------
[80/80] Total 100% | 0.0 B/s | 0.0 B | 00m00s
Running transaction
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[32/82] Installing perl-POSIX-0:2.20-51 100% | 160.4 MiB/s | 328.5 KiB | 00m00s
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[36/82] Installing perl-SelectSaver-0:1 100% | 0.0 B/s | 2.6 KiB | 00m00s
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[45/82] Installing perl-overloading-0:0 100% | 5.4 MiB/s | 5.5 KiB | 00m00s
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[51/82] Installing perl-constant-0:1.33 100% | 26.7 MiB/s | 27.4 KiB | 00m00s
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[53/82] Installing perl-Errno-0:1.38-51 100% | 0.0 B/s | 8.8 KiB | 00m00s
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[55/82] Installing perl-overload-0:1.37 100% | 70.3 MiB/s | 71.9 KiB | 00m00s
[56/82] Installing perl-Storable-1:3.32 100% | 182.6 MiB/s | 374.1 KiB | 00m00s
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[59/82] Installing perl-Carp-0:1.54-511 100% | 46.6 MiB/s | 47.7 KiB | 00m00s
[60/82] Installing perl-Exporter-0:5.78 100% | 54.3 MiB/s | 55.6 KiB | 00m00s
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[62/82] Installing perl-PathTools-0:3.9 100% | 116.1 MiB/s | 356.6 KiB | 00m00s
[63/82] Installing perl-Encode-4:3.21-5 100% | 295.3 MiB/s | 5.9 MiB | 00m00s
[64/82] Installing perl-libs-4:5.40.0-5 100% | 195.7 MiB/s | 11.0 MiB | 00m00s
[65/82] Installing perl-interpreter-4:5 100% | 296.9 MiB/s | 304.0 KiB | 00m00s
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warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead
[82/82] Installing perl-generators-0:1. 100% | 152.5 KiB/s | 23.2 KiB | 00m00s
Warning: skipped PGP checks for 1 package from repository: copr_base
Complete!
Finish: build setup for bwa-0.7.17-14.fc42.src.rpm
Start: rpmbuild bwa-0.7.17-14.fc42.src.rpm
Building target platforms: aarch64
Building for target aarch64
setting SOURCE_DATE_EPOCH=1722211200
Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.IQgALb
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ test -d /builddir/build/BUILD/bwa-0.7.17-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/bwa-0.7.17-build
+ /usr/bin/rm -rf /builddir/build/BUILD/bwa-0.7.17-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/bwa-0.7.17-build
+ /usr/bin/mkdir -p /builddir/build/BUILD/bwa-0.7.17-build/SPECPARTS
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.CFBfGb
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ rm -rf bwa-0.7.17
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/bwa-0.7.17.tar.bz2
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd bwa-0.7.17
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ echo 'Patch #0 (bwa-fix-build-gcc10.patch):'
Patch #0 (bwa-fix-build-gcc10.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0
patching file rle.h
Patch #1 (bwa-simde.patch):
+ echo 'Patch #1 (bwa-simde.patch):'
+ /usr/bin/patch --no-backup-if-mismatch -f -p1 --fuzz=0
patching file ksw.c
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.Z7e2a6
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd bwa-0.7.17
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP'
+ /usr/bin/make -O -j4 V=1 VERBOSE=1 'CFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP'
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kstring.c -o kstring.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kthread.c -o kthread.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bntseq.c -o bntseq.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwt.c -o bwt.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS utils.c -o utils.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS ksw.c -o ksw.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwamem_pair.c -o bwamem_pair.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwa.c -o bwa.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS malloc_wrap.c -o malloc_wrap.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwamem_extra.c -o bwamem_extra.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS QSufSort.c -o QSufSort.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS rope.c -o rope.o
rope.c: In function ‘rope_restore_node’:
rope.c:282:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
282 | fread(&is_bottom, 1, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~
rope.c:283:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
283 | fread(&n, 2, 1, fp);
| ^~~~~~~~~~~~~~~~~~~
rope.c:291:25: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
291 | fread(p[i].c, 8, 6, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~
rope.c:292:25: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
292 | fread(q, 2, 1, fp);
| ^~~~~~~~~~~~~~~~~~
rope.c:293:25: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
293 | fread(q + 1, 1, *q, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~
rope.c: In function ‘rope_restore’:
rope.c:312:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
312 | fread(&r->max_nodes, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
rope.c:313:9: warning: ignoring return value of ‘fread’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
313 | fread(&r->block_len, 4, 1, fp);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS rle.c -o rle.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS is.c -o is.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtindex.c -o bwtindex.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwashm.c -o bwashm.o
bwashm.c: In function ‘bwa_shm_stage’:
bwashm.c:29:9: warning: ignoring return value of ‘ftruncate’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
29 | ftruncate(shmid, BWA_CTL_SIZE);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
bwashm.c:66:9: warning: ignoring return value of ‘ftruncate’ declared with attribute ‘warn_unused_result’ [-Wunused-result]
66 | ftruncate(shmid, idx->l_mem);
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwt_gen.c -o bwt_gen.o
bwt_gen.c: In function ‘BWTIncBuildRelativeRank’:
bwt_gen.c:879:17: warning: variable ‘oldInverseSa0RelativeRank’ set but not used [-Wunused-but-set-variable]
879 | bgint_t oldInverseSa0RelativeRank = 0;
| ^~~~~~~~~~~~~~~~~~~~~~~~~
bwt_gen.c: In function ‘BWTIncMergeBwt’:
bwt_gen.c:953:22: warning: variable ‘bitsInWordMinusBitPerChar’ set but not used [-Wunused-but-set-variable]
953 | unsigned int bitsInWordMinusBitPerChar;
| ^~~~~~~~~~~~~~~~~~~~~~~~~
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwaseqio.c -o bwaseqio.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtgap.c -o bwtgap.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bamlite.c -o bamlite.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtaln.c -o bwtaln.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwase.c -o bwase.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS kopen.c -o kopen.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS pemerge.c -o pemerge.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS maxk.c -o maxk.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_main.c -o bwtsw2_main.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwape.c -o bwape.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwt_lite.c -o bwt_lite.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwamem.c -o bwamem.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_chain.c -o bwtsw2_chain.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS fastmap.c -o fastmap.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS main.c -o main.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_pair.c -o bwtsw2_pair.o
ar -csru libbwa.a utils.o kthread.o kstring.o ksw.o bwt.o bntseq.o bwa.o bwamem.o bwamem_pair.o bwamem_extra.o malloc_wrap.o QSufSort.o bwt_gen.o rope.o rle.o is.o bwtindex.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_aux.c -o bwtsw2_aux.o
gcc -c -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwtsw2_core.c -o bwtsw2_core.o
gcc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -O3 -DUSE_SIMDE -DSIMDE_ENABLE_NATIVE_ALIASES -fopenmp-simd -DSIMDE_ENABLE_OPENMP -DHAVE_PTHREAD -DUSE_MALLOC_WRAPPERS bwashm.o bwase.o bwaseqio.o bwtgap.o bwtaln.o bamlite.o bwape.o kopen.o pemerge.o maxk.o bwtsw2_core.o bwtsw2_main.o bwtsw2_aux.o bwt_lite.o bwtsw2_chain.o fastmap.o bwtsw2_pair.o main.o -o bwa -L. -lbwa -lm -lz -lpthread -lrt
bwamem.c:1207:21: warning: type of ‘kt_for’ does not match original declaration [-Wlto-type-mismatch]
1207 | extern void kt_for(int n_threads, void (*func)(void*,int,int), void *data, int n);
| ^
kthread.c:49:6: note: type mismatch in parameter 4
49 | void kt_for(int n_threads, void (*func)(void*,long,int), void *data, long n)
| ^
kthread.c:49:6: note: type ‘long int’ should match type ‘int’
kthread.c:49:6: note: ‘kt_for’ was previously declared here
kthread.c:49:6: note: code may be misoptimized unless ‘-fno-strict-aliasing’ is used
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.uQHPA2
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ '[' /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT '!=' / ']'
+ rm -rf /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT
++ dirname /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/bwa-0.7.17-build
+ mkdir /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd bwa-0.7.17
+ rm -rf /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT
+ mkdir -p /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/bin
+ mkdir -p /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/share/bwa/bwakit
+ mkdir -p /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/share/man/man1
+ install -m 0755 bwa /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/bin
+ install -m 0755 qualfa2fq.pl /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/bin
+ install -m 0755 xa2multi.pl /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/bin
+ install -m 0755 bwakit/README.md bwakit/bwa-postalt.js bwakit/run-HLA bwakit/run-bwamem bwakit/run-gen-ref bwakit/typeHLA-selctg.js bwakit/typeHLA.js bwakit/typeHLA.sh /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/share/bwa/bwakit
+ install -m 0644 bwa.1 /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT//usr/share/man/man1/bwa.1
+ /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 0.7.17-14.fc42 --unique-debug-suffix -0.7.17-14.fc42.aarch64 --unique-debug-src-base bwa-0.7.17-14.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/bwa-0.7.17-build/bwa-0.7.17
find-debuginfo: starting
Extracting debug info from 1 files
DWARF-compressing 1 files
sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/bwa-0.7.17-14.fc42.aarch64
1068 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
mangling shebang in /usr/share/bwa/bwakit/typeHLA.sh from /bin/bash to #!/usr/bin/bash
*** WARNING: ./usr/share/bwa/bwakit/typeHLA.js is executable but has no shebang, removing executable bit
*** WARNING: ./usr/share/bwa/bwakit/typeHLA-selctg.js is executable but has no shebang, removing executable bit
mangling shebang in /usr/share/bwa/bwakit/run-gen-ref from /bin/bash to #!/usr/bin/bash
mangling shebang in /usr/share/bwa/bwakit/run-bwamem from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/share/bwa/bwakit/run-HLA from /bin/bash to #!/usr/bin/bash
*** WARNING: ./usr/share/bwa/bwakit/bwa-postalt.js is executable but has no shebang, removing executable bit
*** WARNING: ./usr/share/bwa/bwakit/README.md is executable but has no shebang, removing executable bit
mangling shebang in /usr/bin/xa2multi.pl from /usr/bin/env perl to #!/usr/bin/perl
mangling shebang in /usr/bin/qualfa2fq.pl from /usr/bin/env perl to #!/usr/bin/perl
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT
Scanned 15 directories and 69 files,
processed 0 inodes,
0 modified (0 replaced + 0 rewritten),
0 unsupported format, 0 errors
Reading /builddir/build/BUILD/bwa-0.7.17-build/SPECPARTS/rpm-debuginfo.specpart
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.6eDXmb
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd bwa-0.7.17
+ ./bwa
+ grep '^Version: 0.7.17'
Version: 0.7.17-r1188
+ RPM_EC=0
++ jobs -p
+ exit 0
Processing files: bwa-0.7.17-14.fc42.aarch64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.G3X3Gk
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ cd bwa-0.7.17
+ DOCDIR=/builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT/usr/share/doc/bwa
+ export LC_ALL=C.UTF-8
+ LC_ALL=C.UTF-8
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT/usr/share/doc/bwa
+ cp -pr /builddir/build/BUILD/bwa-0.7.17-build/bwa-0.7.17/COPYING /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT/usr/share/doc/bwa
+ cp -pr /builddir/build/BUILD/bwa-0.7.17-build/bwa-0.7.17/NEWS.md /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT/usr/share/doc/bwa
+ cp -pr /builddir/build/BUILD/bwa-0.7.17-build/bwa-0.7.17/README.md /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT/usr/share/doc/bwa
+ cp -pr /builddir/build/BUILD/bwa-0.7.17-build/bwa-0.7.17/README-alt.md /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT/usr/share/doc/bwa
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: bwa = 0.7.17-14.fc42 bwa(aarch-64) = 0.7.17-14.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /usr/bin/bash /usr/bin/perl ld-linux-aarch64.so.1()(64bit) ld-linux-aarch64.so.1(GLIBC_2.17)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.29)(64bit) libz.so.1()(64bit) perl(Getopt::Std) perl(strict) perl(warnings) rtld(GNU_HASH)
Processing files: bwa-debugsource-0.7.17-14.fc42.aarch64
Provides: bwa-debugsource = 0.7.17-14.fc42 bwa-debugsource(aarch-64) = 0.7.17-14.fc42
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: bwa-debuginfo-0.7.17-14.fc42.aarch64
Provides: bwa-debuginfo = 0.7.17-14.fc42 bwa-debuginfo(aarch-64) = 0.7.17-14.fc42 debuginfo(build-id) = 982d0a56e7c2cdde9139944cda90978f2492b6fb
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: bwa-debugsource(aarch-64) = 0.7.17-14.fc42
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/bwa-0.7.17-build/BUILDROOT
Wrote: /builddir/build/RPMS/bwa-0.7.17-14.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/bwa-debugsource-0.7.17-14.fc42.aarch64.rpm
Wrote: /builddir/build/RPMS/bwa-debuginfo-0.7.17-14.fc42.aarch64.rpm
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.EsrOGD
+ umask 022
+ cd /builddir/build/BUILD/bwa-0.7.17-build
+ test -d /builddir/build/BUILD/bwa-0.7.17-build
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/bwa-0.7.17-build
+ rm -rf /builddir/build/BUILD/bwa-0.7.17-build
+ RPM_EC=0
++ jobs -p
+ exit 0
Finish: rpmbuild bwa-0.7.17-14.fc42.src.rpm
Finish: build phase for bwa-0.7.17-14.fc42.src.rpm
INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-aarch64-1727277661.926377/root/var/log/dnf5.log
INFO: Done(/var/lib/copr-rpmbuild/results/bwa-0.7.17-14.fc42.src.rpm) Config(child) 0 minutes 16 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
"packages": [
{
"name": "bwa-debuginfo",
"epoch": null,
"version": "0.7.17",
"release": "14.fc42",
"arch": "aarch64"
},
{
"name": "bwa-debugsource",
"epoch": null,
"version": "0.7.17",
"release": "14.fc42",
"arch": "aarch64"
},
{
"name": "bwa",
"epoch": null,
"version": "0.7.17",
"release": "14.fc42",
"arch": "src"
},
{
"name": "bwa",
"epoch": null,
"version": "0.7.17",
"release": "14.fc42",
"arch": "aarch64"
}
]
}
RPMResults finished