Mock Version: 1.4.4
Mock Version: 1.4.4
Mock Version: 1.4.4
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'], chrootPath='/var/lib/mock/657183-epel-7-ppc64le-1509651057/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fff88a5d8d0>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=[]printOutput=True)
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'], chrootPath='/var/lib/mock/657183-epel-7-ppc64le-1509651057/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fff88a5d8d0>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=[]printOutput=True)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
warning: Could not canonicalize hostname: copr-builder-282219362.novalocal
warning: Could not canonicalize hostname: copr-builder-282219362.novalocal
Building target platforms: ppc64le
Building target platforms: ppc64le
Building for target ppc64le
Building for target ppc64le
Wrote: /builddir/build/SRPMS/R-pbdPROF-0.3.1-2.el7.centos.src.rpm
Wrote: /builddir/build/SRPMS/R-pbdPROF-0.3.1-2.el7.centos.src.rpm
Child return code was: 0
Child return code was: 0
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'], chrootPath='/var/lib/mock/657183-epel-7-ppc64le-1509651057/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fff88a5d8d0>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=[]printOutput=True)
ENTER ['do'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'], chrootPath='/var/lib/mock/657183-epel-7-ppc64le-1509651057/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x3fff88a5d8d0>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=[]printOutput=True)
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Executing command: ['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target ppc64le --nodeps /builddir/build/SPECS/R-pbdPROF.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'en_US.UTF-8'} and shell False
Building target platforms: ppc64le
Building target platforms: ppc64le
Building for target ppc64le
Building for target ppc64le
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.SZMkXL
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.SZMkXL
+ umask 022
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf pbdPROF
+ rm -rf pbdPROF
+ /usr/bin/mkdir -p pbdPROF
+ /usr/bin/mkdir -p pbdPROF
+ cd pbdPROF
+ cd pbdPROF
+ /usr/bin/gzip -dc /builddir/build/SOURCES/pbdPROF_0.3-1.tar.gz
+ /usr/bin/gzip -dc /builddir/build/SOURCES/pbdPROF_0.3-1.tar.gz
+ /usr/bin/tar -xf -
+ /usr/bin/tar -xf -
+ STATUS=0
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ exit 0
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.XrfN2O
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.XrfN2O
+ umask 022
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ cd pbdPROF
+ cd pbdPROF
+ exit 0
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.0cTl8R
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.0cTl8R
+ umask 022
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le '!=' / ']'
+ '[' /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
+ rm -rf /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
++ dirname /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
++ dirname /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
+ mkdir /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
+ cd pbdPROF
+ cd pbdPROF
+ mkdir -p /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library
+ mkdir -p /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library
+ . /etc/profile.d/modules.sh
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 8968 -ocomm=
++++ /bin/ps -p 8968 -ocomm=
+++ /bin/basename sh
+++ /bin/basename sh
++ shell=sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpi/openmpi-ppc64le
+ module load mpi/openmpi-ppc64le
++ /usr/bin/modulecmd sh load mpi/openmpi-ppc64le
++ /usr/bin/modulecmd sh load mpi/openmpi-ppc64le
+ eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-ppc64le' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-ppc64le' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-ppc64le' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-ppc64le' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-ppc64le' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le' ';export' '_LMFILES_;'
+ eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-ppc64le' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-ppc64le' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-ppc64le' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-ppc64le' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-ppc64le' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi-ppc64le
++ LOADEDMODULES=mpi/openmpi-ppc64le
++ export LOADEDMODULES
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man
++ MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ export MANPATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ export MPI_BIN
++ MPI_COMPILER=openmpi-ppc64le
++ MPI_COMPILER=openmpi-ppc64le
++ export MPI_COMPILER
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le
++ export MPI_FORTRAN_MOD_DIR
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/openmpi
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-ppc64le
++ MPI_INCLUDE=/usr/include/openmpi-ppc64le
++ export MPI_INCLUDE
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/openmpi/lib
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-ppc64le
++ MPI_MAN=/usr/share/man/openmpi-ppc64le
++ export MPI_MAN
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-ppc64le
++ MPI_SYSCONFIG=/etc/openmpi-ppc64le
++ export MPI_SYSCONFIG
++ export MPI_SYSCONFIG
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ export PATH
++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi
++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi
++ export PYTHONPATH
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le
++ export _LMFILES_
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library '--configure-args=--with-mpi-type=OPENMPI --with-mpi-include=/usr/include/openmpi-ppc64le --with-mpi-libpath=/usr/lib64/openmpi/lib --with-mpiP=-lmpiP' pbdPROF
+ /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library '--configure-args=--with-mpi-type=OPENMPI --with-mpi-include=/usr/include/openmpi-ppc64le --with-mpi-libpath=/usr/lib64/openmpi/lib --with-mpiP=-lmpiP' pbdPROF
* installing *source* package 'pbdPROF' ...
* installing *source* package 'pbdPROF' ...
** package 'pbdPROF' successfully unpacked and MD5 sums checked
** package 'pbdPROF' successfully unpacked and MD5 sums checked
checking for gcc... gcc -m64 -std=gnu99
checking for gcc... gcc -m64 -std=gnu99
checking whether the C compiler works... yes
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking for suffix of executables... 
checking whether we are cross compiling... no
checking whether we are cross compiling... no
checking for suffix of object files... o
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether we are using the GNU C compiler... yes
checking whether gcc -m64 -std=gnu99 accepts -g... yes
checking whether gcc -m64 -std=gnu99 accepts -g... yes
checking for gcc -m64 -std=gnu99 option to accept ISO C89... none needed
checking for gcc -m64 -std=gnu99 option to accept ISO C89... none needed
checking for sed... /usr/bin/sed
checking for sed... /usr/bin/sed
checking for mpicc... mpicc
checking for mpicc... mpicc
checking for ompi_info... ompi_info
checking for ompi_info... ompi_info
checking for openpty in -lutil... yes
checking for openpty in -lutil... yes
checking for main in -lpthread... yes
checking for main in -lpthread... yes
 
 
******************* Results of pbdPROF package configure *****************
******************* Results of pbdPROF package configure *****************
 
 
>> TMP_INC = 
>> TMP_INC = 
>> TMP_LIB = 
>> TMP_LIB = 
>> MPI_ROOT = 
>> MPI_ROOT = 
>> MPITYPE = OPENMPI
>> MPITYPE = OPENMPI
>> MPI_INCLUDE_PATH = /usr/include/openmpi-ppc64le
>> MPI_INCLUDE_PATH = /usr/include/openmpi-ppc64le
>> MPI_LIBPATH = /usr/lib64/openmpi/lib
>> MPI_LIBPATH = /usr/lib64/openmpi/lib
>> MPI_LIBS =  -lutil -lpthread
>> MPI_LIBS =  -lutil -lpthread
>> MPI_DEFS = -DMPI2
>> MPI_DEFS = -DMPI2
>> MPI_INCL2 = 
>> MPI_INCL2 = 
>> MPI_LDFLAGS = 
>> MPI_LDFLAGS = 
>> PKG_CPPFLAGS = -I/usr/include/openmpi-ppc64le  -DMPI2 -DOPENMPI
>> PKG_CPPFLAGS = -I/usr/include/openmpi-ppc64le  -DMPI2 -DOPENMPI
>> PKG_LIBS = -L/usr/lib64/openmpi/lib -lmpi  -lutil -lpthread
>> PKG_LIBS = -L/usr/lib64/openmpi/lib -lmpi  -lutil -lpthread
 
 
******************* Results of profiler configure ***********************
******************* Results of profiler configure ***********************
 
 
>> FPMPI_EXT_LINK = 
>> FPMPI_EXT_LINK = 
>> FPMPI_INTERNAL = 
>> FPMPI_INTERNAL = 
>> FPMPI_OBJS = 
>> FPMPI_OBJS = 
>> INT32 = 
>> INT32 = 
>> R_FPMPI = 
>> R_FPMPI = 
>> MPIP_EXT_LINK = -lmpiP
>> MPIP_EXT_LINK = -lmpiP
>> TAU_EXT_LINK = 
>> TAU_EXT_LINK = 
>> PROF_TYPE = mpiP
>> PROF_TYPE = mpiP
 
 
*************************************************************************
*************************************************************************
 
 
configure: creating ./config.status
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/Makevars
** libs
** libs
installing via 'install.libs.R' to /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library/pbdPROF
installing via 'install.libs.R' to /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library/pbdPROF
** R
** R
** data
** data
*** moving datasets to lazyload DB
*** moving datasets to lazyload DB
** demo
** demo
** inst
** inst
** preparing package for lazy loading
** preparing package for lazy loading
** help
** help
*** installing help indices
*** installing help indices
  converting help for package 'pbdPROF'
  converting help for package 'pbdPROF'
    finding HTML links ... done
    finding HTML links ... done
    Example-datasets                        html  
    Example-datasets                        html  
    pbdPROF-package                         html  
    pbdPROF-package                         html  
    prof-class                              html  
    prof-class                              html  
    prof-print                              html  
    prof-print                              html  
    profilers                               html  
    profilers                               html  
    read.prof                               html  
    read.prof                               html  
** building package indices
** building package indices
** installing vignettes
** installing vignettes
   'pbdPROF-guide.Rnw' 
   'pbdPROF-guide.Rnw' 
** testing if installed package can be loaded
** testing if installed package can be loaded
* DONE (pbdPROF)
* DONE (pbdPROF)
+ test -d pbdPROF/src
+ test -d pbdPROF/src
+ cd pbdPROF/src
+ cd pbdPROF/src
+ rm -f '*.o' '*.so'
+ rm -f '*.o' '*.so'
+ rm -f /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library/R.css
+ rm -f /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le/usr/lib64/R/library/R.css
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/pbdPROF
+ /usr/lib/rpm/find-debuginfo.sh --strict-build-id -m --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 /builddir/build/BUILD/pbdPROF
/usr/lib/rpm/sepdebugcrcfix: Updated 0 CRC32s, 0 CRC32s did match.
/usr/lib/rpm/sepdebugcrcfix: Updated 0 CRC32s, 0 CRC32s did match.
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/redhat/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/brp-python-bytecompile /usr/bin/python 1
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-python-hardlink
+ /usr/lib/rpm/redhat/brp-java-repack-jars
+ /usr/lib/rpm/redhat/brp-java-repack-jars
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.kxm28V
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.kxm28V
+ umask 022
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ cd pbdPROF
+ cd pbdPROF
+ . /etc/profile.d/modules.sh
+ . /etc/profile.d/modules.sh
++++ /bin/ps -p 9437 -ocomm=
++++ /bin/ps -p 9437 -ocomm=
+++ /bin/basename sh
+++ /bin/basename sh
++ shell=sh
++ shell=sh
++ '[' -f /usr/share/Modules/init/sh ']'
++ '[' -f /usr/share/Modules/init/sh ']'
++ . /usr/share/Modules/init/sh
++ . /usr/share/Modules/init/sh
+++ MODULESHOME=/usr/share/Modules
+++ MODULESHOME=/usr/share/Modules
+++ export MODULESHOME
+++ export MODULESHOME
+++ '[' '' = '' ']'
+++ '[' '' = '' ']'
+++ LOADEDMODULES=
+++ LOADEDMODULES=
+++ export LOADEDMODULES
+++ export LOADEDMODULES
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+++ '[' /usr/share/Modules/modulefiles:/etc/modulefiles = '' ']'
+ module load mpi/openmpi-ppc64le
+ module load mpi/openmpi-ppc64le
++ /usr/bin/modulecmd sh load mpi/openmpi-ppc64le
++ /usr/bin/modulecmd sh load mpi/openmpi-ppc64le
+ eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-ppc64le' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-ppc64le' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-ppc64le' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-ppc64le' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-ppc64le' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le' ';export' '_LMFILES_;'
+ eval LD_LIBRARY_PATH=/usr/lib64/openmpi/lib ';export' 'LD_LIBRARY_PATH;LOADEDMODULES=mpi/openmpi-ppc64le' ';export' 'LOADEDMODULES;MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man' ';export' 'MANPATH;MPI_BIN=/usr/lib64/openmpi/bin' ';export' 'MPI_BIN;MPI_COMPILER=openmpi-ppc64le' ';export' 'MPI_COMPILER;MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le' ';export' 'MPI_FORTRAN_MOD_DIR;MPI_HOME=/usr/lib64/openmpi' ';export' 'MPI_HOME;MPI_INCLUDE=/usr/include/openmpi-ppc64le' ';export' 'MPI_INCLUDE;MPI_LIB=/usr/lib64/openmpi/lib' ';export' 'MPI_LIB;MPI_MAN=/usr/share/man/openmpi-ppc64le' ';export' 'MPI_MAN;MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'MPI_PYTHON_SITEARCH;MPI_SUFFIX=_openmpi' ';export' 'MPI_SUFFIX;MPI_SYSCONFIG=/etc/openmpi-ppc64le' ';export' 'MPI_SYSCONFIG;PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin' ';export' 'PATH;PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi' ';export' 'PYTHONPATH;_LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le' ';export' '_LMFILES_;'
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ LD_LIBRARY_PATH=/usr/lib64/openmpi/lib
++ export LD_LIBRARY_PATH
++ export LD_LIBRARY_PATH
++ LOADEDMODULES=mpi/openmpi-ppc64le
++ LOADEDMODULES=mpi/openmpi-ppc64le
++ export LOADEDMODULES
++ export LOADEDMODULES
++ MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man
++ MANPATH=/usr/share/man/openmpi-ppc64le:/usr/share/man:/usr/local/share/man
++ export MANPATH
++ export MANPATH
++ MPI_BIN=/usr/lib64/openmpi/bin
++ MPI_BIN=/usr/lib64/openmpi/bin
++ export MPI_BIN
++ export MPI_BIN
++ MPI_COMPILER=openmpi-ppc64le
++ MPI_COMPILER=openmpi-ppc64le
++ export MPI_COMPILER
++ export MPI_COMPILER
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le
++ MPI_FORTRAN_MOD_DIR=/usr/lib64/gfortran/modules/openmpi-ppc64le
++ export MPI_FORTRAN_MOD_DIR
++ export MPI_FORTRAN_MOD_DIR
++ MPI_HOME=/usr/lib64/openmpi
++ MPI_HOME=/usr/lib64/openmpi
++ export MPI_HOME
++ export MPI_HOME
++ MPI_INCLUDE=/usr/include/openmpi-ppc64le
++ MPI_INCLUDE=/usr/include/openmpi-ppc64le
++ export MPI_INCLUDE
++ export MPI_INCLUDE
++ MPI_LIB=/usr/lib64/openmpi/lib
++ MPI_LIB=/usr/lib64/openmpi/lib
++ export MPI_LIB
++ export MPI_LIB
++ MPI_MAN=/usr/share/man/openmpi-ppc64le
++ MPI_MAN=/usr/share/man/openmpi-ppc64le
++ export MPI_MAN
++ export MPI_MAN
++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
++ MPI_PYTHON_SITEARCH=/usr/lib64/python2.7/site-packages/openmpi
++ export MPI_PYTHON_SITEARCH
++ export MPI_PYTHON_SITEARCH
++ MPI_SUFFIX=_openmpi
++ MPI_SUFFIX=_openmpi
++ export MPI_SUFFIX
++ export MPI_SUFFIX
++ MPI_SYSCONFIG=/etc/openmpi-ppc64le
++ MPI_SYSCONFIG=/etc/openmpi-ppc64le
++ export MPI_SYSCONFIG
++ export MPI_SYSCONFIG
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ PATH=/usr/lib64/openmpi/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/.local/bin:/builddir/bin
++ export PATH
++ export PATH
++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi
++ PYTHONPATH=/usr/lib64/python2.7/site-packages/openmpi
++ export PYTHONPATH
++ export PYTHONPATH
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le
++ _LMFILES_=/etc/modulefiles/mpi/openmpi-ppc64le
++ export _LMFILES_
++ export _LMFILES_
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ export 'CFLAGS= -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ CFLAGS=' -O2 -g -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector-strong --param=ssp-buffer-size=4 -grecord-gcc-switches   -m64 -mcpu=power8 -mtune=power8'
+ /usr/bin/R CMD check --no-install pbdPROF
+ /usr/bin/R CMD check --no-install pbdPROF
* using log directory '/builddir/build/BUILD/pbdPROF/pbdPROF.Rcheck'
* using log directory '/builddir/build/BUILD/pbdPROF/pbdPROF.Rcheck'
* using R version 3.4.1 (2017-06-30)
* using R version 3.4.1 (2017-06-30)
* using platform: powerpc64le-redhat-linux-gnu (64-bit)
* using platform: powerpc64le-redhat-linux-gnu (64-bit)
* using session charset: ASCII
* using session charset: ASCII
* using option '--no-install'
* using option '--no-install'
* checking for file 'pbdPROF/DESCRIPTION' ... OK
* checking for file 'pbdPROF/DESCRIPTION' ... OK
* this is package 'pbdPROF' version '0.3-1'
* this is package 'pbdPROF' version '0.3-1'
* checking if this is a source package ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking for sufficient/correct file permissions ... OK
* checking package directory ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking R files for syntax errors ... OK
* checking dependencies in R code ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking Rd contents ... OK
* checking contents of 'data' directory ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... NOTE
* checking data for non-ASCII characters ... NOTE
  Error in .requirePackage(package) : 
  Error in .requirePackage(package) : 
    unable to find required package 'pbdPROF'
    unable to find required package 'pbdPROF'
  Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
  Calls: <Anonymous> ... .extendsForS3 -> extends -> getClassDef -> .requirePackage
  Execution halted
  Execution halted
* checking data for ASCII and uncompressed saves ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... NOTE
* checking compilation flags in Makevars ... NOTE
Package has both 'src/Makevars.in' and 'src/Makevars'.
Package has both 'src/Makevars.in' and 'src/Makevars'.
Installation with --no-configure' is unlikely to work.  If you intended
Installation with --no-configure' is unlikely to work.  If you intended
'src/Makevars' to be used on Windows, rename it to 'src/Makevars.win'
'src/Makevars' to be used on Windows, rename it to 'src/Makevars.win'
otherwise remove it.  If 'configure' created 'src/Makevars', you need a
otherwise remove it.  If 'configure' created 'src/Makevars', you need a
'cleanup' script.
'cleanup' script.
* checking for GNU extensions in Makefiles ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking files in 'vignettes' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... SKIPPED
* checking examples ... SKIPPED
* checking package vignettes in 'inst/doc' ... OK
* checking package vignettes in 'inst/doc' ... OK
* checking running R code from vignettes ... SKIPPED
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* checking PDF version of manual ... OK
* DONE
* DONE
Status: 2 NOTEs
Status: 2 NOTEs
See
See
  '/builddir/build/BUILD/pbdPROF/pbdPROF.Rcheck/00check.log'
  '/builddir/build/BUILD/pbdPROF/pbdPROF.Rcheck/00check.log'
for details.
for details.
+ exit 0
+ exit 0
Processing files: R-pbdPROF-0.3.1-2.el7.centos.noarch
Processing files: R-pbdPROF-0.3.1-2.el7.centos.noarch
Provides: R-pbdPROF = 0.3.1-2.el7.centos
Provides: R-pbdPROF = 0.3.1-2.el7.centos
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Obsoletes: R-pbdPROF < 0.3.1
Obsoletes: R-pbdPROF < 0.3.1
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
Wrote: /builddir/build/RPMS/R-pbdPROF-0.3.1-2.el7.centos.noarch.rpm
Wrote: /builddir/build/RPMS/R-pbdPROF-0.3.1-2.el7.centos.noarch.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.i0hpMb
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.i0hpMb
+ umask 022
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ cd pbdPROF
+ cd pbdPROF
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/R-pbdPROF-0.3.1-2.el7.centos.ppc64le
+ exit 0
+ exit 0
Child return code was: 0
Child return code was: 0