Mock Version: 2.3
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/mcsim.spec'], chrootPath='/var/lib/mock/epel-8-x86_64-1591545061.096411/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f03a368d310>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.thmn24qk:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.thmn24qk:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '16979853cb3348c5a77cc718416413fb', '-D', '/var/lib/mock/epel-8-x86_64-1591545061.096411/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.thmn24qk:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/mcsim.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
Wrote: /builddir/build/SRPMS/mcsim-6.2.0-1.el8.src.rpm
Child return code was: 0
ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/mcsim.spec'], chrootPath='/var/lib/mock/epel-8-x86_64-1591545061.096411/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=<mockbuild.trace_decorator.getLog object at 0x7f03a368d310>timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.thmn24qk:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True)
Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.thmn24qk:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']
Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '00aaae12f5544d9cbb9e3401fe9f24d3', '-D', '/var/lib/mock/epel-8-x86_64-1591545061.096411/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.thmn24qk:/etc/resolv.conf', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;<mock-chroot>\\007"', '--setenv=PS1=<mock-chroot> \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/mcsim.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;<mock-chroot>\\007"', 'PS1': '<mock-chroot> \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False
Building target platforms: x86_64
Building for target x86_64
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.qyjZs3
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf mcsim-6.2.0
+ /usr/bin/gzip -dc /builddir/build/SOURCES/mcsim-6.2.0.tar.gz
+ /usr/bin/tar -xof -
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd mcsim-6.2.0
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ chmod -x examples/SBML/C_periph.xml examples/SBML/C_central.xml
+ dos2unix examples/SBML/C_periph.xml examples/SBML/C_central.xml
dos2unix: converting file examples/SBML/C_periph.xml to Unix format...
dos2unix: converting file examples/SBML/C_central.xml to Unix format...
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.S7Ez8v
+ umask 022
+ cd /builddir/build/BUILD
+ cd mcsim-6.2.0
+ CFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CFLAGS
+ CXXFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection'
+ export CXXFLAGS
+ FFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FFLAGS
+ FCFLAGS='-O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules'
+ export FCFLAGS
+ LDFLAGS='-Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld'
+ export LDFLAGS
+ '[' 1 = 1 ']'
+++ dirname ./configure
++ find . -name config.guess -o -name config.sub
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.sub
+ '[' -f /usr/lib/rpm/redhat/config.sub ']'
+ /usr/bin/rm -f ./config.sub
++ basename ./config.sub
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.sub ./config.sub
'/usr/lib/rpm/redhat/config.sub' -> './config.sub'
+ for i in $(find $(dirname ./configure) -name config.guess -o -name config.sub)
++ basename ./config.guess
+ '[' -f /usr/lib/rpm/redhat/config.guess ']'
+ /usr/bin/rm -f ./config.guess
++ basename ./config.guess
+ /usr/bin/cp -fv /usr/lib/rpm/redhat/config.guess ./config.guess
'/usr/lib/rpm/redhat/config.guess' -> './config.guess'
+ '[' 1 = 1 ']'
+ '[' x '!=' 'x-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld' ']'
++ find . -name ltmain.sh
+ for i in $(find . -name ltmain.sh)
+ /usr/bin/sed -i.backup -e 's~compiler_flags=$~compiler_flags="-Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld"~' ./ltmain.sh
+ ./configure --build=x86_64-redhat-linux-gnu --host=x86_64-redhat-linux-gnu --program-prefix= --disable-dependency-tracking --prefix=/usr --exec-prefix=/usr --bindir=/usr/bin --sbindir=/usr/sbin --sysconfdir=/etc --datadir=/usr/share --includedir=/usr/include --libdir=/usr/lib64 --libexecdir=/usr/libexec --localstatedir=/var --sharedstatedir=/var/lib --mandir=/usr/share/man --infodir=/usr/share/info
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for style of include used by make... GNU
checking for x86_64-redhat-linux-gnu-gcc... no
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking dependency style of gcc... none
checking for x86_64-redhat-linux-gnu-ar... no
checking for x86_64-redhat-linux-gnu-lib... no
checking for x86_64-redhat-linux-gnu-link... no
checking for ar... ar
checking the archiver (ar) interface... ar
checking build system type... x86_64-redhat-linux-gnu
checking host system type... x86_64-redhat-linux-gnu
checking how to print strings... printf
checking for a sed that does not truncate output... /usr/bin/sed
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for fgrep... /usr/bin/grep -F
checking for ld used by gcc... /usr/bin/ld
checking if the linker (/usr/bin/ld) is GNU ld... yes
checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B
checking the name lister (/usr/bin/nm -B) interface... BSD nm
checking whether ln -s works... yes
checking the maximum length of command line arguments... 1572864
checking how to convert x86_64-redhat-linux-gnu file names to x86_64-redhat-linux-gnu format... func_convert_file_noop
checking how to convert x86_64-redhat-linux-gnu file names to toolchain format... func_convert_file_noop
checking for /usr/bin/ld option to reload object files... -r
checking for x86_64-redhat-linux-gnu-objdump... no
checking for objdump... objdump
checking how to recognize dependent libraries... pass_all
checking for x86_64-redhat-linux-gnu-dlltool... no
checking for dlltool... no
checking how to associate runtime and link libraries... printf %s\n
checking for x86_64-redhat-linux-gnu-ar... ar
checking for archiver @FILE support... @
checking for x86_64-redhat-linux-gnu-strip... no
checking for strip... strip
checking for x86_64-redhat-linux-gnu-ranlib... no
checking for ranlib... ranlib
checking command to parse /usr/bin/nm -B output from gcc object... ok
checking for sysroot... no
checking for a working dd... /usr/bin/dd
checking how to truncate binary pipes... /usr/bin/dd bs=4096 count=1
checking for x86_64-redhat-linux-gnu-mt... no
checking for mt... no
checking if : is a manifest tool... no
checking how to run the C preprocessor... gcc -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for dlfcn.h... yes
checking for objdir... .libs
checking if gcc supports -fno-rtti -fno-exceptions... no
checking for gcc option to produce PIC... -fPIC -DPIC
checking if gcc PIC flag -fPIC -DPIC works... yes
checking if gcc static flag -static works... no
checking if gcc supports -c -o file.o... yes
checking if gcc supports -c -o file.o... (cached) yes
checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes
checking whether -lc should be explicitly linked in... no
checking dynamic linker characteristics... GNU/Linux ld.so
checking how to hardcode library paths into programs... immediate
checking whether stripping libraries is possible... yes
checking if libtool supports shared libraries... yes
checking whether to build shared libraries... yes
checking whether to build static libraries... yes
checking for x86_64-redhat-linux-gnu-gcc... gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking dependency style of gcc... (cached) none
checking whether to compile using MPI... yes
checking for x86_64-redhat-linux-gnu-mpicc... (cached) gcc
checking for x86_64-redhat-linux-gnu-gcc... (cached) gcc
checking whether we are using the GNU C compiler... (cached) yes
checking whether gcc accepts -g... (cached) yes
checking for gcc option to accept ISO C89... (cached) none needed
checking whether gcc understands -c and -o together... (cached) yes
checking dependency style of gcc... (cached) none
checking for function MPI_Init... no
checking for function MPI_Init in -lmpi... no
checking for function MPI_Init in -lmpich... no
configure: No-MPI requested, won't use MPI.
checking for wish... no
checking for gnuplot... no
checking for main in -llapack... no
checking for main in -lsundials_nvecserial... no
checking for main in -lsundials_cvodes... no
checking for main in -lgslcblas... yes
checking for gsl_cdf_gamma_P in -lgsl... yes
checking for main in -lm... yes
checking for main in -lsbml... no
checking for ANSI C header files... (cached) yes
checking float.h usability... yes
checking float.h presence... yes
checking for float.h... yes
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking for an ANSI C-conforming const... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for floor... yes
checking for modf... yes
checking for pow... yes
checking for sqrt... yes
checking for strchr... yes
checking for erfc... yes
checking for nextafter... yes
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating mod/Makefile
config.status: creating sim/Makefile
config.status: creating doc/Makefile
config.status: creating sim/makemcsim
config.status: creating sim/makemcsimp
config.status: creating sim/makemcsimd
config.status: creating sim/makemcsims
config.status: creating examples/perc/Makefile
config.status: creating config.h
config.status: executing depfiles commands
config.status: executing libtool commands
+ chmod +x examples/perc/Makefile
+ /usr/bin/make -O -j2
/usr/bin/make  all-recursive
Making all in mod
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o getopt.o getopt.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lexerr.o lexerr.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lexfn.o lexfn.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lex.o lex.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o mod.o mod.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o modi.o modi.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o modd.o modd.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o modiSBML2.o modiSBML2.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o modiSBML.o modiSBML.c
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o strutil.o strutil.c
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gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o modo.o modo.c
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/bin/sh ../libtool  --tag=CC   --mode=link gcc -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o mod getopt.o lex.o lexerr.o lexfn.o mod.o modd.o modi.o modiSBML.o modiSBML2.o modo.o strutil.o  -lm -lgsl -lgslcblas 
libtool: link: gcc -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o mod getopt.o lex.o lexerr.o lexfn.o mod.o modd.o modi.o modiSBML.o modiSBML2.o modo.o strutil.o  -lm -lgsl -lgslcblas
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Making all in sim
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o delays.lo delays.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c delays.c  -fPIC -DPIC -o .libs/delays.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c delays.c -o delays.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o getopt.lo getopt.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c getopt.c  -fPIC -DPIC -o .libs/getopt.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c getopt.c -o getopt.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lexerr.lo lexerr.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lexerr.c  -fPIC -DPIC -o .libs/lexerr.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lexerr.c -o lexerr.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lex.lo lex.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lex.c  -fPIC -DPIC -o .libs/lex.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lex.c -o lex.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o list.lo list.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c list.c  -fPIC -DPIC -o .libs/list.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c list.c -o list.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lexfn.lo lexfn.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lexfn.c  -fPIC -DPIC -o .libs/lexfn.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lexfn.c -o lexfn.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lsodes2.lo lsodes2.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lsodes2.c  -fPIC -DPIC -o .libs/lsodes2.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lsodes2.c -o lsodes2.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o matutil.lo matutil.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matutil.c  -fPIC -DPIC -o .libs/matutil.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matutil.c -o matutil.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o matutilo.lo matutilo.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matutilo.c  -fPIC -DPIC -o .libs/matutilo.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c matutilo.c -o matutilo.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o lsodes1.lo lsodes1.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lsodes1.c  -fPIC -DPIC -o .libs/lsodes1.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c lsodes1.c -o lsodes1.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o modelu.lo modelu.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c modelu.c  -fPIC -DPIC -o .libs/modelu.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c modelu.c -o modelu.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o optdsign.lo optdsign.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c optdsign.c  -fPIC -DPIC -o .libs/optdsign.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c optdsign.c -o optdsign.o >/dev/null 2>&1
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/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o mh.lo mh.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mh.c  -fPIC -DPIC -o .libs/mh.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c mh.c -o mh.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o random.lo random.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c random.c  -fPIC -DPIC -o .libs/random.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c random.c -o random.o >/dev/null 2>&1
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make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o sim.lo sim.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sim.c  -fPIC -DPIC -o .libs/sim.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c sim.c -o sim.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o siminit.lo siminit.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c siminit.c  -fPIC -DPIC -o .libs/siminit.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c siminit.c -o siminit.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o simmonte.lo simmonte.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c simmonte.c  -fPIC -DPIC -o .libs/simmonte.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c simmonte.c -o simmonte.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o simo.lo simo.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c simo.c  -fPIC -DPIC -o .libs/simo.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c simo.c -o simo.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o strutil.lo strutil.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c strutil.c  -fPIC -DPIC -o .libs/strutil.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c strutil.c -o strutil.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o simi.lo simi.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c simi.c  -fPIC -DPIC -o .libs/simi.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c simi.c -o simi.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=compile gcc -DHAVE_CONFIG_H -I. -I..    -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c -o yourcode.lo yourcode.c
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c yourcode.c  -fPIC -DPIC -o .libs/yourcode.o
libtool: compile:  gcc -DHAVE_CONFIG_H -I. -I.. -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -c yourcode.c -o yourcode.o >/dev/null 2>&1
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
/bin/sh ../libtool  --tag=CC   --mode=link gcc -O3 -w -O2 -g -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -fexceptions -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection  -Wl,-z,relro  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o libmcsim.la -rpath /usr/lib64 delays.lo getopt.lo lex.lo lexerr.lo lexfn.lo list.lo lsodes1.lo lsodes2.lo matutil.lo matutilo.lo mh.lo modelu.lo optdsign.lo random.lo sim.lo simi.lo siminit.lo simmonte.lo simo.lo strutil.lo yourcode.lo  -lm -lgsl -lgslcblas 
libtool: link: gcc -shared  -fPIC -DPIC  .libs/delays.o .libs/getopt.o .libs/lex.o .libs/lexerr.o .libs/lexfn.o .libs/list.o .libs/lsodes1.o .libs/lsodes2.o .libs/matutil.o .libs/matutilo.o .libs/mh.o .libs/modelu.o .libs/optdsign.o .libs/random.o .libs/sim.o .libs/simi.o .libs/siminit.o .libs/simmonte.o .libs/simo.o .libs/strutil.o .libs/yourcode.o   -lm -lgsl -lgslcblas -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -O3 -O2 -g -fstack-protector-strong -grecord-gcc-switches -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -Wl,-z -Wl,relro -Wl,-z -Wl,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld   -Wl,-soname -Wl,libmcsim.so.0 -o .libs/libmcsim.so.0.0.0
libtool: link: (cd ".libs" && rm -f "libmcsim.so.0" && ln -s "libmcsim.so.0.0.0" "libmcsim.so.0")
libtool: link: (cd ".libs" && rm -f "libmcsim.so" && ln -s "libmcsim.so.0.0.0" "libmcsim.so")
libtool: link: ar cru .libs/libmcsim.a  delays.o getopt.o lex.o lexerr.o lexfn.o list.o lsodes1.o lsodes2.o matutil.o matutilo.o mh.o modelu.o optdsign.o random.o sim.o simi.o siminit.o simmonte.o simo.o strutil.o yourcode.o
libtool: link: ranlib .libs/libmcsim.a
libtool: link: ( cd ".libs" && rm -f "libmcsim.la" && ln -s "../libmcsim.la" "libmcsim.la" )
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
Making all in doc
make[2]: Nothing to be done for 'all'.
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.wu0mgE
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64
++ dirname /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64
+ cd mcsim-6.2.0
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64 'INSTALL=/usr/bin/install -p'
Making install in mod
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/bin'
  /bin/sh ../libtool   --mode=install /usr/bin/install -p mod '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/bin'
libtool: install: /usr/bin/install -p mod /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/bin/mod
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/mcsim/mod'
 /usr/bin/install -p -m 644 getopt.c getopt.h hungtype.h lex.c lex.h lexerr.c lexerr.h lexfn.c lexfn.h mod.c mod.h modd.c modd.h modi.c modi.h modiSBML.c modiSBML2.c modiSBML.h modo.c modo.h strutil.c strutil.h '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/mcsim/mod'
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
Making install in sim
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/bin'
 /usr/bin/install -p makemcsim makemcsims makemcsimd makemcsimp '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/bin'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64'
 /bin/sh ../libtool   --mode=install /usr/bin/install -p   libmcsim.la '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64'
libtool: install: /usr/bin/install -p .libs/libmcsim.so.0.0.0 /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64/libmcsim.so.0.0.0
libtool: install: (cd /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64 && { ln -s -f libmcsim.so.0.0.0 libmcsim.so.0 || { rm -f libmcsim.so.0 && ln -s libmcsim.so.0.0.0 libmcsim.so.0; }; })
libtool: install: (cd /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64 && { ln -s -f libmcsim.so.0.0.0 libmcsim.so || { rm -f libmcsim.so && ln -s libmcsim.so.0.0.0 libmcsim.so; }; })
libtool: install: /usr/bin/install -p .libs/libmcsim.lai /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64/libmcsim.la
libtool: install: /usr/bin/install -p .libs/libmcsim.a /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64/libmcsim.a
libtool: install: chmod 644 /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64/libmcsim.a
libtool: install: ranlib /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64/libmcsim.a
libtool: warning: remember to run 'libtool --finish /usr/lib64'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include'
 /usr/bin/install -p -m 644 delays.h matutil.h list.h lex.h sim.h lexfn.h hungtype.h modiface.h modelu.h random.h yourcode.h '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include'
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/mcsim/sim'
 /usr/bin/install -p -m 644 delays.c delays.h getopt.c getopt.h hungtype.h lex.c lex.h lexerr.c lexerr.h lexfn.c lexfn.h list.c list.h lsodes.h lsodes1.c lsodes2.c matutil.c matutil.h matutilo.c matutilo.h mh.c mh.h modelu.c modelu.h modiface.h optdsign.c optdsign.h random.c random.h sim.c sim.h simi.c simi.h siminit.c siminit.h simmonte.c simmonte.h simo.c simo.h strutil.c '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/mcsim/sim'
 /usr/bin/install -p -m 644 strutil.h yourcode.c yourcode.h '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/mcsim/sim'
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
Making install in doc
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/doc'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/doc'
make[2]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/info'
 /usr/bin/install -p -m 644 ./mcsim.info '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/info'
 install-info --info-dir='/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/info' '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/info/mcsim.info'
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/doc'
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/doc'
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0'
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0'
make[2]: Nothing to be done for 'install-exec-am'.
 /usr/bin/mkdir -p '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include'
 /usr/bin/install -p -m 644 config.h '/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include'
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0'
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0'
+ mkdir /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/mcsim
+ mv /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/config.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/delays.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/hungtype.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/lex.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/lexfn.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/list.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/matutil.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/modelu.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/modiface.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/random.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/sim.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/yourcode.h /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/include/mcsim
+ rm /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/info/dir
+ /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 6.2.0-1.el8 --unique-debug-suffix -6.2.0-1.el8.x86_64 --unique-debug-src-base mcsim-6.2.0-1.el8.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/mcsim-6.2.0
extracting debug info from /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/bin/mod
extracting debug info from /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/lib64/libmcsim.so.0.0.0
/usr/lib/rpm/sepdebugcrcfix: Updated 2 CRC32s, 0 CRC32s did match.
1963 blocks
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
/sbin/ldconfig: Warning: ignoring configuration file that cannot be opened: /etc/ld.so.conf: No such file or directory
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/brp-python-bytecompile 1
+ /usr/lib/rpm/brp-python-hardlink
+ PYTHON3=/usr/libexec/platform-python
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/lib64/libmcsim.la is executable but has empty or no shebang, removing executable bit
Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.dGTwFP
+ umask 022
+ cd /builddir/build/BUILD
+ cd mcsim-6.2.0
+ make check
Making check in mod
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/mod'
Making check in sim
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/sim'
Making check in doc
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0/doc'
make[1]: Nothing to be done for 'check'.
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0/doc'
make[1]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0'
make  check-TESTS
make[2]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0'
make[3]: Entering directory '/builddir/build/BUILD/mcsim-6.2.0'
PASS: examples/perc/Makefile
============================================================================
Testsuite summary for mcsim 6.2.0
============================================================================
# TOTAL: 1
# PASS:  1
# SKIP:  0
# XFAIL: 0
# FAIL:  0
# XPASS: 0
# ERROR: 0
============================================================================
make[3]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0'
make[2]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0'
make[1]: Leaving directory '/builddir/build/BUILD/mcsim-6.2.0'
+ rm -f examples/perc/mcsim.perc examples/perc/model.c examples/perc/Makefile examples/perc/Makefile.log examples/perc/Makefile.trs
+ exit 0
Processing files: mcsim-6.2.0-1.el8.x86_64
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.M8hun5
+ umask 022
+ cd /builddir/build/BUILD
+ cd mcsim-6.2.0
+ LICENSEDIR=/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/licenses/mcsim
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/licenses/mcsim
+ cp -pr COPYING /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/licenses/mcsim
+ exit 0
Provides: libmcsim.so.0()(64bit) mcsim = 6.2.0-1.el8 mcsim(x86-64) = 6.2.0-1.el8
Requires(interp): /bin/sh /bin/sh /sbin/ldconfig
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires(post): /bin/sh info
Requires(preun): /bin/sh info
Requires(postun): /sbin/ldconfig
Requires: libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgsl.so.23()(64bit) libgslcblas.so.0()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) rtld(GNU_HASH)
Processing files: mcsim-devel-6.2.0-1.el8.x86_64
Provides: mcsim-devel = 6.2.0-1.el8 mcsim-devel(x86-64) = 6.2.0-1.el8
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: /bin/bash libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_2.7)(64bit) libgsl.so.23()(64bit) libgslcblas.so.0()(64bit) libm.so.6()(64bit) libmcsim.so.0()(64bit) rtld(GNU_HASH)
Processing files: mcsim-doc-6.2.0-1.el8.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.dOUOJl
+ umask 022
+ cd /builddir/build/BUILD
+ cd mcsim-6.2.0
+ DOCDIR=/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/doc/mcsim-doc
+ export LC_ALL=C
+ LC_ALL=C
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/doc/mcsim-doc
+ cp -pr AUTHORS /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/doc/mcsim-doc
+ cp -pr doc/mcsim.html /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/doc/mcsim-doc
+ cp -pr doc/mcsim.pdf /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/doc/mcsim-doc
+ cp -pr examples /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/doc/mcsim-doc
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.Kd8D9B
+ umask 022
+ cd /builddir/build/BUILD
+ cd mcsim-6.2.0
+ LICENSEDIR=/builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/licenses/mcsim-doc
+ export LC_ALL=C
+ LC_ALL=C
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/licenses/mcsim-doc
+ cp -pr COPYING /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64/usr/share/licenses/mcsim-doc
+ exit 0
Provides: mcsim-doc = 6.2.0-1.el8
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: mcsim-debugsource-6.2.0-1.el8.x86_64
Provides: mcsim-debugsource = 6.2.0-1.el8 mcsim-debugsource(x86-64) = 6.2.0-1.el8
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: mcsim-debuginfo-6.2.0-1.el8.x86_64
Provides: debuginfo(build-id) = 5ce90b16cb5478a949be07e90b29991f1cf2ce2b mcsim-debuginfo = 6.2.0-1.el8 mcsim-debuginfo(x86-64) = 6.2.0-1.el8
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: mcsim-debugsource(x86-64) = 6.2.0-1.el8
Processing files: mcsim-devel-debuginfo-6.2.0-1.el8.x86_64
Provides: debuginfo(build-id) = 5d13b7de2de3240f7c5d82bd0d952ba64d3fd4ed mcsim-devel-debuginfo = 6.2.0-1.el8 mcsim-devel-debuginfo(x86-64) = 6.2.0-1.el8
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: mcsim-debugsource(x86-64) = 6.2.0-1.el8
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64
Wrote: /builddir/build/RPMS/mcsim-6.2.0-1.el8.x86_64.rpm
Wrote: /builddir/build/RPMS/mcsim-devel-6.2.0-1.el8.x86_64.rpm
Wrote: /builddir/build/RPMS/mcsim-doc-6.2.0-1.el8.noarch.rpm
Wrote: /builddir/build/RPMS/mcsim-debugsource-6.2.0-1.el8.x86_64.rpm
Wrote: /builddir/build/RPMS/mcsim-debuginfo-6.2.0-1.el8.x86_64.rpm
Wrote: /builddir/build/RPMS/mcsim-devel-debuginfo-6.2.0-1.el8.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.maBcZX
+ umask 022
+ cd /builddir/build/BUILD
+ cd mcsim-6.2.0
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/mcsim-6.2.0-1.el8.x86_64
+ exit 0
Child return code was: 0