Warning: Permanently added '2620:52:6:1161:dead:beef:cafe:c126' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/10426601-fedora-44-x86_64 --chroot fedora-44-x86_64 Version: 1.8 PID: 27123 Logging PID: 27125 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 10426601, 'buildroot_pkgs': [], 'chroot': 'fedora-44-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'c5ef68ba974b9c31a341ffea8183842269c20a20', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/mrtrix3', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'mrtrix3', 'package_version': '3.0.8-3', 'project_dirname': 'neurofedora', 'project_name': 'neurofedora', 'project_owner': 'mhough', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/mhough/neurofedora/fedora-44-x86_64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'mhough/neurofedora--mhough', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'mhough', 'tags': [], 'task_id': '10426601-fedora-44-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/mrtrix3 /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3 --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/mhough/neurofedora/mrtrix3', '/var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3'... Running: git checkout c5ef68ba974b9c31a341ffea8183842269c20a20 -- cmd: ['git', 'checkout', 'c5ef68ba974b9c31a341ffea8183842269c20a20', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3 rc: 0 stdout: stderr: Note: switching to 'c5ef68ba974b9c31a341ffea8183842269c20a20'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at c5ef68b automatic import of mrtrix3 Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3 rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading eigen-3.4.0.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o eigen-3.4.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/mrtrix3/eigen-3.4.0.tar.gz/md5/4c527a9171d71a72a9d4186e65bea559/eigen-3.4.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 2641k 100 2641k 0 0 21.2M 0 --:--:-- --:--:-- --:--:-- 21.1M INFO: Reading stdout from command: md5sum eigen-3.4.0.tar.gz INFO: Downloading mrtrix3-3.0.8.tar.gz INFO: Calling: curl -H Pragma: -H 'Accept-Encoding: identity' -o mrtrix3-3.0.8.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/mhough/neurofedora/mrtrix3/mrtrix3-3.0.8.tar.gz/md5/0c77980d9c5d01ebbfea44f437bf942a/mrtrix3-3.0.8.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 3962k 100 3962k 0 0 24.6M 0 --:--:-- --:--:-- --:--:-- 24.8M INFO: Reading stdout from command: md5sum mrtrix3-3.0.8.tar.gz tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3/mrtrix3.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3 --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1777994715.390577 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 6.7 starting (python version = 3.14.2, NVR = mock-6.7-1.fc43), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3/mrtrix3.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3 --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1777994715.390577 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3/mrtrix3.spec) Config(fedora-44-x86_64) Start: clean chroot Finish: clean chroot Mock Version: 6.7 INFO: Mock Version: 6.7 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-bootstrap-1777994715.390577/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using container image: registry.fedoraproject.org/fedora:44 INFO: Pulling image: registry.fedoraproject.org/fedora:44 INFO: Tagging container image as mock-bootstrap-ea3a034b-9a50-4b8d-9120-0ff90ac749ff INFO: Checking that 12bff14068ede24c4bb2f69bc733ece669022f6ecfbb86449586fe8341a5599a image matches host's architecture INFO: Copy content of container 12bff14068ede24c4bb2f69bc733ece669022f6ecfbb86449586fe8341a5599a to /var/lib/mock/fedora-44-x86_64-bootstrap-1777994715.390577/root INFO: mounting 12bff14068ede24c4bb2f69bc733ece669022f6ecfbb86449586fe8341a5599a with podman image mount INFO: image 12bff14068ede24c4bb2f69bc733ece669022f6ecfbb86449586fe8341a5599a as /var/lib/containers/storage/overlay/e0737090a730e7c83f4d754211b3c4967f9480397db33a7f8321d6a97812b4ad/merged INFO: umounting image 12bff14068ede24c4bb2f69bc733ece669022f6ecfbb86449586fe8341a5599a (/var/lib/containers/storage/overlay/e0737090a730e7c83f4d754211b3c4967f9480397db33a7f8321d6a97812b4ad/merged) with podman image umount INFO: Removing image mock-bootstrap-ea3a034b-9a50-4b8d-9120-0ff90ac749ff INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-1777994715.390577/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.1-2.fc44.x86_64 rpm-sequoia-1.10.2-1.fc44.x86_64 dnf5-5.4.2.0-1.fc44.x86_64 dnf5-plugins-5.4.2.0-1.fc44.x86_64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: updates 100% | 6.2 MiB/s | 4.5 MiB | 00m01s Copr repository 100% | 80.1 KiB/s | 64.0 KiB | 00m01s fedora 100% | 31.6 MiB/s | 36.7 MiB | 00m01s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash x86_64 0:5.3.9-3.fc44 fedora 8.5 MiB bzip2 x86_64 0:1.0.8-23.fc44 fedora 95.0 KiB coreutils x86_64 0:9.10-3.fc44 fedora 5.6 MiB cpio x86_64 0:2.15-9.fc44 fedora 1.1 MiB diffutils x86_64 0:3.12-5.fc44 fedora 1.6 MiB fedora-release-common noarch 0:44-17 fedora 20.6 KiB findutils x86_64 1:4.10.0-7.fc44 fedora 1.9 MiB gawk x86_64 0:5.3.2-3.fc44 fedora 1.8 MiB glibc-minimal-langpack x86_64 0:2.43-4.fc44 updates 0.0 B grep x86_64 0:3.12-3.fc44 fedora 1.0 MiB gzip x86_64 0:1.14-2.fc44 fedora 401.6 KiB info x86_64 0:7.2-9.fc44 fedora 365.6 KiB patch x86_64 0:2.8-4.fc44 fedora 226.6 KiB redhat-rpm-config noarch 0:343-19.fc44 fedora 183.6 KiB rpm-build x86_64 0:6.0.1-2.fc44 fedora 294.6 KiB sed x86_64 0:4.9-7.fc44 fedora 857.2 KiB shadow-utils x86_64 2:4.19.0-7.fc44 updates 4.0 MiB tar x86_64 2:1.35-8.fc44 fedora 3.0 MiB unzip x86_64 0:6.0-69.fc44 fedora 445.8 KiB util-linux x86_64 0:2.41.4-7.fc44 updates 3.5 MiB which x86_64 0:2.23-4.fc44 fedora 83.4 KiB xz x86_64 1:5.8.2-2.fc44 fedora 1.3 MiB Installing dependencies: R-srpm-macros noarch 0:1.3.7-1.fc44 updates 3.5 KiB add-determinism x86_64 0:0.7.3-2.fc44 updates 2.2 MiB alternatives x86_64 0:1.33-5.fc44 fedora 62.1 KiB ansible-srpm-macros noarch 0:1-20.1.fc44 fedora 35.7 KiB audit-libs x86_64 0:4.1.4-1.fc44 fedora 390.5 KiB binutils x86_64 0:2.46-1.fc44 fedora 27.2 MiB build-reproducibility-srpm-macros noarch 0:0.7.3-2.fc44 updates 1.2 KiB bzip2-libs x86_64 0:1.0.8-23.fc44 fedora 80.5 KiB ca-certificates noarch 0:2025.2.80_v9.0.304-7.fc44 updates 2.7 MiB cmake-srpm-macros noarch 0:4.3.0-1.fc44 fedora 524.0 B coreutils-common x86_64 0:9.10-3.fc44 fedora 10.7 MiB crypto-policies noarch 0:20251128-3.git19878fe.fc44 fedora 132.6 KiB curl x86_64 0:8.18.0-6.fc44 updates 480.0 KiB cyrus-sasl-lib x86_64 0:2.1.28-35.fc44 fedora 2.3 MiB debugedit x86_64 0:5.3-2.fc44 updates 220.8 KiB dwz x86_64 0:0.16-3.fc44 fedora 290.9 KiB ed x86_64 0:1.22.5-2.fc44 fedora 149.7 KiB efi-srpm-macros noarch 0:6-6.fc44 fedora 40.2 KiB elfutils x86_64 0:0.195-1.fc44 updates 3.0 MiB elfutils-debuginfod-client x86_64 0:0.195-1.fc44 updates 83.8 KiB elfutils-default-yama-scope noarch 0:0.195-1.fc44 updates 1.8 KiB elfutils-libelf x86_64 0:0.195-1.fc44 updates 1.2 MiB elfutils-libs x86_64 0:0.195-1.fc44 updates 715.3 KiB fedora-gpg-keys noarch 0:44-1 fedora 133.4 KiB fedora-release noarch 0:44-17 fedora 0.0 B fedora-release-identity-basic noarch 0:44-17 fedora 629.0 B fedora-repos noarch 0:44-1 fedora 4.9 KiB file x86_64 0:5.46-10.fc44 updates 100.1 KiB file-libs x86_64 0:5.46-10.fc44 updates 11.9 MiB filesystem x86_64 0:3.18-52.fc44 fedora 112.0 B filesystem-srpm-macros noarch 0:3.18-52.fc44 fedora 38.2 KiB fonts-srpm-macros noarch 1:5.0.0-2.fc44 fedora 55.8 KiB forge-srpm-macros noarch 0:0.4.0-4.fc44 fedora 38.9 KiB fpc-srpm-macros noarch 0:1.3-16.fc44 fedora 144.0 B gap-srpm-macros noarch 0:2-2.fc44 fedora 2.1 KiB gdb-minimal x86_64 0:17.1-4.fc44 fedora 14.2 MiB gdbm-libs x86_64 1:1.23-11.fc44 fedora 129.6 KiB ghc-srpm-macros noarch 0:1.10-1.fc44 fedora 792.0 B glibc x86_64 0:2.43-4.fc44 updates 6.9 MiB glibc-common x86_64 0:2.43-4.fc44 updates 1.0 MiB glibc-gconv-extra x86_64 0:2.43-4.fc44 updates 7.4 MiB gmp x86_64 1:6.3.0-5.fc44 fedora 815.2 KiB gnat-srpm-macros noarch 0:7-2.fc44 fedora 1.0 KiB gnulib-l10n noarch 0:20241231-2.fc44 fedora 655.0 KiB gnupg2 x86_64 0:2.4.9-7.fc44 updates 6.5 MiB gnupg2-dirmngr x86_64 0:2.4.9-7.fc44 updates 634.0 KiB gnupg2-gpg-agent x86_64 0:2.4.9-7.fc44 updates 686.6 KiB gnupg2-gpgconf x86_64 0:2.4.9-7.fc44 updates 249.7 KiB gnupg2-keyboxd x86_64 0:2.4.9-7.fc44 updates 201.2 KiB gnupg2-verify x86_64 0:2.4.9-7.fc44 updates 360.3 KiB gnutls x86_64 0:3.8.12-1.fc44 fedora 3.7 MiB go-srpm-macros noarch 0:3.8.0-2.fc44 fedora 61.9 KiB gpgverify noarch 0:2.2-4.fc44 fedora 8.7 KiB ima-evm-utils-libs x86_64 0:1.6.2-8.fc44 fedora 60.6 KiB jansson x86_64 0:2.14-4.fc44 fedora 88.9 KiB java-srpm-macros noarch 0:1-8.fc44 fedora 870.0 B json-c x86_64 0:0.18-8.fc44 fedora 82.6 KiB kernel-srpm-macros noarch 0:1.0-28.fc44 fedora 1.9 KiB keyutils-libs x86_64 0:1.6.3-7.fc44 fedora 54.2 KiB krb5-libs x86_64 0:1.22.2-4.fc44 updates 2.4 MiB libacl x86_64 0:2.3.2-6.fc44 fedora 35.8 KiB libarchive x86_64 0:3.8.7-1.fc44 updates 1.0 MiB libassuan x86_64 0:2.5.7-5.fc44 fedora 163.8 KiB libattr x86_64 0:2.5.2-8.fc44 fedora 24.3 KiB libblkid x86_64 0:2.41.4-7.fc44 updates 274.3 KiB libbrotli x86_64 0:1.2.0-3.fc44 fedora 865.0 KiB libcap x86_64 0:2.78-1.fc44 updates 212.1 KiB libcap-ng x86_64 0:0.9.3-1.fc44 updates 68.8 KiB libcbor x86_64 0:0.13.0-2.fc44 fedora 79.5 KiB libcom_err x86_64 0:1.47.3-4.fc44 fedora 63.0 KiB libcurl x86_64 0:8.18.0-6.fc44 updates 1.0 MiB libeconf x86_64 0:0.7.9-3.fc44 fedora 64.8 KiB libevent x86_64 0:2.1.12-17.fc44 fedora 978.7 KiB libfdisk x86_64 0:2.41.4-7.fc44 updates 388.3 KiB libffi x86_64 0:3.5.2-2.fc44 fedora 87.7 KiB libfido2 x86_64 0:1.16.0-5.fc44 fedora 246.4 KiB libfsverity x86_64 0:1.6-4.fc44 fedora 28.4 KiB libgcc x86_64 0:16.1.1-1.fc44 updates 270.6 KiB libgcrypt x86_64 0:1.12.2-1.fc44 updates 1.7 MiB libgomp x86_64 0:16.1.1-1.fc44 updates 581.4 KiB libgpg-error x86_64 0:1.58-2.fc44 fedora 941.6 KiB libidn2 x86_64 0:2.3.8-3.fc44 fedora 556.4 KiB libksba x86_64 0:1.6.7-5.fc44 fedora 414.4 KiB liblastlog2 x86_64 0:2.41.4-7.fc44 updates 37.6 KiB libmount x86_64 0:2.41.4-7.fc44 updates 388.6 KiB libnghttp2 x86_64 0:1.68.0-3.fc44 fedora 166.1 KiB libnghttp3 x86_64 0:1.15.0-1.fc44 fedora 159.2 KiB libpkgconf x86_64 0:2.5.1-1.fc44 fedora 90.1 KiB libpsl x86_64 0:0.21.5-7.fc44 fedora 76.3 KiB libselinux x86_64 0:3.10-1.fc44 fedora 201.0 KiB libselinux-utils x86_64 0:3.10-1.fc44 fedora 305.7 KiB libsemanage x86_64 0:3.10-1.fc44 fedora 312.3 KiB libsepol x86_64 0:3.10-1.fc44 fedora 870.0 KiB libsmartcols x86_64 0:2.41.4-7.fc44 updates 188.3 KiB libssh x86_64 0:0.12.0-1.fc44 fedora 719.1 KiB libssh-config noarch 0:0.12.0-1.fc44 fedora 277.0 B libstdc++ x86_64 0:16.1.1-1.fc44 updates 3.1 MiB libtasn1 x86_64 0:4.21.0-1.fc44 fedora 180.6 KiB libtool-ltdl x86_64 0:2.5.4-10.fc44 fedora 70.0 KiB libunistring x86_64 0:1.1-11.fc44 fedora 1.7 MiB libusb1 x86_64 0:1.0.29-5.fc44 fedora 175.2 KiB libuuid x86_64 0:2.41.4-7.fc44 updates 37.2 KiB libverto x86_64 0:0.3.2-12.fc44 fedora 25.3 KiB libxcrypt x86_64 0:4.5.2-3.fc44 fedora 293.2 KiB libxml2 x86_64 0:2.12.10-6.fc44 fedora 1.8 MiB libzstd x86_64 0:1.5.7-5.fc44 fedora 956.1 KiB linkdupes x86_64 0:0.7.3-2.fc44 updates 780.9 KiB lua-libs x86_64 0:5.4.8-5.fc44 fedora 281.7 KiB lua-srpm-macros noarch 0:1-17.fc44 fedora 1.3 KiB lz4-libs x86_64 0:1.10.0-4.fc44 fedora 157.3 KiB mpfr x86_64 0:4.2.2-3.fc44 fedora 849.1 KiB ncurses-base noarch 0:6.6-1.fc44 fedora 329.7 KiB ncurses-libs x86_64 0:6.6-1.fc44 fedora 968.9 KiB nettle x86_64 0:3.10.1-3.fc44 fedora 794.3 KiB ngtcp2 x86_64 0:1.22.1-1.fc44 updates 338.2 KiB ngtcp2-crypto-ossl x86_64 0:1.22.1-1.fc44 updates 51.6 KiB npth x86_64 0:1.8-4.fc44 fedora 49.5 KiB ocaml-srpm-macros noarch 0:11-3.fc44 fedora 1.9 KiB openblas-srpm-macros noarch 0:2-21.fc44 fedora 112.0 B openldap x86_64 0:2.6.13-1.fc44 fedora 669.9 KiB openssl-libs x86_64 1:3.5.5-2.fc44 updates 9.2 MiB p11-kit x86_64 0:0.26.2-1.fc44 fedora 2.6 MiB p11-kit-trust x86_64 0:0.26.2-1.fc44 fedora 478.3 KiB package-notes-srpm-macros noarch 0:0.5-16.fc44 fedora 1.6 KiB pam-libs x86_64 0:1.7.2-1.fc44 fedora 130.5 KiB pcre2 x86_64 0:10.47-1.fc44.1 fedora 718.6 KiB pcre2-syntax noarch 0:10.47-1.fc44.1 fedora 281.9 KiB perl-srpm-macros noarch 0:1-61.fc44 fedora 861.0 B pkgconf x86_64 0:2.5.1-1.fc44 fedora 92.7 KiB pkgconf-m4 noarch 0:2.5.1-1.fc44 fedora 14.3 KiB pkgconf-pkg-config x86_64 0:2.5.1-1.fc44 fedora 989.0 B policycoreutils x86_64 0:3.10-1.fc44 fedora 884.1 KiB popt x86_64 0:1.19-10.fc44 fedora 132.6 KiB publicsuffix-list-dafsa noarch 0:20260116-1.fc44 fedora 70.4 KiB pyproject-srpm-macros noarch 0:1.21.0-1.fc44 updates 3.0 KiB python-srpm-macros noarch 0:3.14-12.fc44 fedora 51.6 KiB qt5-srpm-macros noarch 0:5.15.18-2.fc44 fedora 500.0 B qt6-srpm-macros noarch 0:6.10.3-1.fc44 updates 472.0 B readline x86_64 0:8.3-4.fc44 fedora 519.5 KiB rpm x86_64 0:6.0.1-2.fc44 fedora 3.1 MiB rpm-build-libs x86_64 0:6.0.1-2.fc44 fedora 276.3 KiB rpm-libs x86_64 0:6.0.1-2.fc44 fedora 961.2 KiB rpm-plugin-selinux x86_64 0:6.0.1-2.fc44 fedora 11.9 KiB rpm-sequoia x86_64 0:1.10.2-1.fc44 updates 2.4 MiB rpm-sign-libs x86_64 0:6.0.1-2.fc44 fedora 39.6 KiB rust-srpm-macros noarch 0:28.4-3.fc44 fedora 5.5 KiB selinux-policy noarch 0:44.1-1.fc44 updates 32.0 KiB selinux-policy-targeted noarch 0:44.1-1.fc44 updates 18.6 MiB setup noarch 0:2.15.0-28.fc44 fedora 724.9 KiB sqlite-libs x86_64 0:3.51.2-1.fc44 fedora 1.6 MiB systemd-libs x86_64 0:259.5-1.fc44 fedora 2.4 MiB systemd-standalone-sysusers x86_64 0:259.5-1.fc44 fedora 305.7 KiB tpm2-tss x86_64 0:4.1.3-9.fc44 fedora 1.6 MiB tree-sitter-srpm-macros noarch 0:0.4.2-2.fc44 fedora 8.3 KiB util-linux-core x86_64 0:2.41.4-7.fc44 updates 1.5 MiB xxhash-libs x86_64 0:0.8.3-4.fc44 fedora 94.0 KiB xz-libs x86_64 1:5.8.2-2.fc44 fedora 217.7 KiB zig-srpm-macros noarch 0:1-8.fc44 fedora 1.3 KiB zip x86_64 0:3.0-45.fc44 fedora 698.0 KiB zlib-ng-compat x86_64 0:2.3.3-3.fc44 fedora 165.6 KiB zstd x86_64 0:1.5.7-5.fc44 fedora 502.4 KiB Installing groups: Buildsystem building group Transaction Summary: Installing: 183 packages Total size of inbound packages is 69 MiB. Need to download 69 MiB. After this operation, 223 MiB extra will be used (install 223 MiB, remove 0 B). [ 1/183] bzip2-0:1.0.8-23.fc44.x86_64 100% | 2.5 MiB/s | 52.1 KiB | 00m00s [ 2/183] cpio-0:2.15-9.fc44.x86_64 100% | 71.6 MiB/s | 293.3 KiB | 00m00s [ 3/183] bash-0:5.3.9-3.fc44.x86_64 100% | 72.8 MiB/s | 1.9 MiB | 00m00s [ 4/183] coreutils-0:9.10-3.fc44.x86_6 100% | 42.4 MiB/s | 1.2 MiB | 00m00s [ 5/183] diffutils-0:3.12-5.fc44.x86_6 100% | 96.5 MiB/s | 395.3 KiB | 00m00s [ 6/183] fedora-release-common-0:44-17 100% | 11.5 MiB/s | 23.7 KiB | 00m00s [ 7/183] findutils-1:4.10.0-7.fc44.x86 100% | 134.9 MiB/s | 552.5 KiB | 00m00s [ 8/183] grep-0:3.12-3.fc44.x86_64 100% | 73.6 MiB/s | 301.6 KiB | 00m00s [ 9/183] gzip-0:1.14-2.fc44.x86_64 100% | 35.0 MiB/s | 179.1 KiB | 00m00s [ 10/183] info-0:7.2-9.fc44.x86_64 100% | 60.8 MiB/s | 186.7 KiB | 00m00s [ 11/183] patch-0:2.8-4.fc44.x86_64 100% | 37.5 MiB/s | 115.2 KiB | 00m00s [ 12/183] redhat-rpm-config-0:343-19.fc 100% | 38.8 MiB/s | 79.4 KiB | 00m00s [ 13/183] rpm-build-0:6.0.1-2.fc44.x86_ 100% | 45.5 MiB/s | 139.9 KiB | 00m00s [ 14/183] sed-0:4.9-7.fc44.x86_64 100% | 103.9 MiB/s | 319.2 KiB | 00m00s [ 15/183] tar-2:1.35-8.fc44.x86_64 100% | 169.6 MiB/s | 868.2 KiB | 00m00s [ 16/183] unzip-0:6.0-69.fc44.x86_64 100% | 65.0 MiB/s | 199.6 KiB | 00m00s [ 17/183] which-0:2.23-4.fc44.x86_64 100% | 6.9 MiB/s | 42.2 KiB | 00m00s [ 18/183] xz-1:5.8.2-2.fc44.x86_64 100% | 98.8 MiB/s | 607.2 KiB | 00m00s [ 19/183] gawk-0:5.3.2-3.fc44.x86_64 100% | 162.2 MiB/s | 1.1 MiB | 00m00s [ 20/183] glibc-minimal-langpack-0:2.43 100% | 26.2 MiB/s | 80.5 KiB | 00m00s [ 21/183] util-linux-0:2.41.4-7.fc44.x8 100% | 150.6 MiB/s | 1.2 MiB | 00m00s [ 22/183] shadow-utils-2:4.19.0-7.fc44. 100% | 118.0 MiB/s | 1.3 MiB | 00m00s [ 23/183] filesystem-0:3.18-52.fc44.x86 100% | 121.3 MiB/s | 1.3 MiB | 00m00s [ 24/183] ncurses-libs-0:6.6-1.fc44.x86 100% | 84.0 MiB/s | 344.1 KiB | 00m00s [ 25/183] bzip2-libs-0:1.0.8-23.fc44.x8 100% | 14.3 MiB/s | 43.8 KiB | 00m00s [ 26/183] gmp-1:6.3.0-5.fc44.x86_64 100% | 63.0 MiB/s | 322.5 KiB | 00m00s [ 27/183] libacl-0:2.3.2-6.fc44.x86_64 100% | 8.1 MiB/s | 24.8 KiB | 00m00s [ 28/183] coreutils-common-0:9.10-3.fc4 100% | 237.0 MiB/s | 2.1 MiB | 00m00s [ 29/183] libattr-0:2.5.2-8.fc44.x86_64 100% | 5.8 MiB/s | 17.9 KiB | 00m00s [ 30/183] libselinux-0:3.10-1.fc44.x86_ 100% | 33.2 MiB/s | 102.0 KiB | 00m00s [ 31/183] fedora-repos-0:44-1.noarch 100% | 9.0 MiB/s | 9.2 KiB | 00m00s [ 32/183] systemd-libs-0:259.5-1.fc44.x 100% | 169.5 MiB/s | 868.0 KiB | 00m00s [ 33/183] pcre2-0:10.47-1.fc44.1.x86_64 100% | 54.2 MiB/s | 277.7 KiB | 00m00s [ 34/183] ed-0:1.22.5-2.fc44.x86_64 100% | 16.7 MiB/s | 85.4 KiB | 00m00s [ 35/183] ansible-srpm-macros-0:1-20.1. 100% | 19.6 MiB/s | 20.1 KiB | 00m00s [ 36/183] efi-srpm-macros-0:6-6.fc44.no 100% | 11.0 MiB/s | 22.6 KiB | 00m00s [ 37/183] cmake-srpm-macros-0:4.3.0-1.f 100% | 5.1 MiB/s | 10.4 KiB | 00m00s [ 38/183] dwz-0:0.16-3.fc44.x86_64 100% | 45.2 MiB/s | 138.9 KiB | 00m00s [ 39/183] filesystem-srpm-macros-0:3.18 100% | 26.0 MiB/s | 26.6 KiB | 00m00s [ 40/183] fonts-srpm-macros-1:5.0.0-2.f 100% | 26.7 MiB/s | 27.4 KiB | 00m00s [ 41/183] forge-srpm-macros-0:0.4.0-4.f 100% | 19.5 MiB/s | 20.0 KiB | 00m00s [ 42/183] fpc-srpm-macros-0:1.3-16.fc44 100% | 7.8 MiB/s | 7.9 KiB | 00m00s [ 43/183] gap-srpm-macros-0:2-2.fc44.no 100% | 8.9 MiB/s | 9.1 KiB | 00m00s [ 44/183] ghc-srpm-macros-0:1.10-1.fc44 100% | 8.6 MiB/s | 8.8 KiB | 00m00s [ 45/183] gnat-srpm-macros-0:7-2.fc44.n 100% | 8.5 MiB/s | 8.7 KiB | 00m00s [ 46/183] go-srpm-macros-0:3.8.0-2.fc44 100% | 27.6 MiB/s | 28.2 KiB | 00m00s [ 47/183] java-srpm-macros-0:1-8.fc44.n 100% | 7.9 MiB/s | 8.1 KiB | 00m00s [ 48/183] kernel-srpm-macros-0:1.0-28.f 100% | 8.8 MiB/s | 9.0 KiB | 00m00s [ 49/183] lua-srpm-macros-0:1-17.fc44.n 100% | 8.7 MiB/s | 8.9 KiB | 00m00s [ 50/183] ocaml-srpm-macros-0:11-3.fc44 100% | 9.1 MiB/s | 9.3 KiB | 00m00s [ 51/183] openblas-srpm-macros-0:2-21.f 100% | 7.6 MiB/s | 7.8 KiB | 00m00s [ 52/183] package-notes-srpm-macros-0:0 100% | 8.9 MiB/s | 9.1 KiB | 00m00s [ 53/183] python-srpm-macros-0:3.14-12. 100% | 11.7 MiB/s | 24.0 KiB | 00m00s [ 54/183] perl-srpm-macros-0:1-61.fc44. 100% | 2.7 MiB/s | 8.4 KiB | 00m00s [ 55/183] qt5-srpm-macros-0:5.15.18-2.f 100% | 2.1 MiB/s | 8.7 KiB | 00m00s [ 56/183] rust-srpm-macros-0:28.4-3.fc4 100% | 5.4 MiB/s | 11.1 KiB | 00m00s [ 57/183] zig-srpm-macros-0:1-8.fc44.no 100% | 8.6 MiB/s | 8.8 KiB | 00m00s [ 58/183] tree-sitter-srpm-macros-0:0.4 100% | 4.4 MiB/s | 13.5 KiB | 00m00s [ 59/183] rpm-0:6.0.1-2.fc44.x86_64 100% | 94.1 MiB/s | 578.3 KiB | 00m00s [ 60/183] popt-0:1.19-10.fc44.x86_64 100% | 32.7 MiB/s | 66.9 KiB | 00m00s [ 61/183] zip-0:3.0-45.fc44.x86_64 100% | 86.1 MiB/s | 264.4 KiB | 00m00s [ 62/183] rpm-build-libs-0:6.0.1-2.fc44 100% | 64.5 MiB/s | 132.2 KiB | 00m00s [ 63/183] readline-0:8.3-4.fc44.x86_64 100% | 56.1 MiB/s | 229.8 KiB | 00m00s [ 64/183] rpm-libs-0:6.0.1-2.fc44.x86_6 100% | 101.4 MiB/s | 415.5 KiB | 00m00s [ 65/183] xz-libs-1:5.8.2-2.fc44.x86_64 100% | 38.0 MiB/s | 116.8 KiB | 00m00s [ 66/183] zstd-0:1.5.7-5.fc44.x86_64 100% | 37.6 MiB/s | 192.5 KiB | 00m00s [ 67/183] mpfr-0:4.2.2-3.fc44.x86_64 100% | 116.5 MiB/s | 357.8 KiB | 00m00s [ 68/183] glibc-common-0:2.43-4.fc44.x8 100% | 121.3 MiB/s | 372.7 KiB | 00m00s [ 69/183] audit-libs-0:4.1.4-1.fc44.x86 100% | 46.1 MiB/s | 141.6 KiB | 00m00s [ 70/183] libeconf-0:0.7.9-3.fc44.x86_6 100% | 8.8 MiB/s | 36.2 KiB | 00m00s [ 71/183] libsemanage-0:3.10-1.fc44.x86 100% | 41.4 MiB/s | 127.3 KiB | 00m00s [ 72/183] libxcrypt-0:4.5.2-3.fc44.x86_ 100% | 64.1 MiB/s | 131.2 KiB | 00m00s [ 73/183] pam-libs-0:1.7.2-1.fc44.x86_6 100% | 28.8 MiB/s | 59.1 KiB | 00m00s [ 74/183] setup-0:2.15.0-28.fc44.noarch 100% | 76.7 MiB/s | 157.2 KiB | 00m00s [ 75/183] util-linux-core-0:2.41.4-7.fc 100% | 136.1 MiB/s | 557.5 KiB | 00m00s [ 76/183] ncurses-base-0:6.6-1.fc44.noa 100% | 43.0 MiB/s | 88.0 KiB | 00m00s [ 77/183] zlib-ng-compat-0:2.3.3-3.fc44 100% | 29.7 MiB/s | 91.1 KiB | 00m00s [ 78/183] libsepol-0:3.10-1.fc44.x86_64 100% | 119.7 MiB/s | 367.6 KiB | 00m00s [ 79/183] gnulib-l10n-0:20241231-2.fc44 100% | 48.9 MiB/s | 150.3 KiB | 00m00s [ 80/183] fedora-gpg-keys-0:44-1.noarch 100% | 46.0 MiB/s | 141.4 KiB | 00m00s [ 81/183] pcre2-syntax-0:10.47-1.fc44.1 100% | 80.4 MiB/s | 164.7 KiB | 00m00s [ 82/183] rpm-sign-libs-0:6.0.1-2.fc44. 100% | 13.7 MiB/s | 28.0 KiB | 00m00s [ 83/183] lua-libs-0:5.4.8-5.fc44.x86_6 100% | 66.7 MiB/s | 136.6 KiB | 00m00s [ 84/183] libzstd-0:1.5.7-5.fc44.x86_64 100% | 118.5 MiB/s | 364.2 KiB | 00m00s [ 85/183] ima-evm-utils-libs-0:1.6.2-8. 100% | 14.6 MiB/s | 30.0 KiB | 00m00s [ 86/183] sqlite-libs-0:3.51.2-1.fc44.x 100% | 195.1 MiB/s | 799.2 KiB | 00m00s [ 87/183] libfsverity-0:1.6-4.fc44.x86_ 100% | 9.4 MiB/s | 19.2 KiB | 00m00s [ 88/183] tpm2-tss-0:4.1.3-9.fc44.x86_6 100% | 71.8 MiB/s | 440.9 KiB | 00m00s [ 89/183] glibc-gconv-extra-0:2.43-4.fc 100% | 162.7 MiB/s | 1.6 MiB | 00m00s [ 90/183] json-c-0:0.18-8.fc44.x86_64 100% | 11.3 MiB/s | 46.3 KiB | 00m00s [ 91/183] glibc-0:2.43-4.fc44.x86_64 100% | 148.1 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gnupg2-gpg-agent-0:2.4.9-7.fc 100% | 55.0 MiB/s | 281.7 KiB | 00m00s [105/183] gnupg2-keyboxd-0:2.4.9-7.fc44 100% | 47.5 MiB/s | 97.3 KiB | 00m00s [106/183] libassuan-0:2.5.7-5.fc44.x86_ 100% | 33.6 MiB/s | 68.9 KiB | 00m00s [107/183] gnupg2-verify-0:2.4.9-7.fc44. 100% | 57.6 MiB/s | 176.9 KiB | 00m00s [108/183] libgpg-error-0:1.58-2.fc44.x8 100% | 82.7 MiB/s | 254.1 KiB | 00m00s [109/183] npth-0:1.8-4.fc44.x86_64 100% | 8.4 MiB/s | 25.8 KiB | 00m00s [110/183] gnutls-0:3.8.12-1.fc44.x86_64 100% | 175.4 MiB/s | 1.4 MiB | 00m00s [111/183] libksba-0:1.6.7-5.fc44.x86_64 100% | 23.3 MiB/s | 167.4 KiB | 00m00s [112/183] openldap-0:2.6.13-1.fc44.x86_ 100% | 37.9 MiB/s | 271.6 KiB | 00m00s [113/183] libtasn1-0:4.21.0-1.fc44.x86_ 100% | 37.1 MiB/s | 76.0 KiB | 00m00s [114/183] libidn2-0:2.3.8-3.fc44.x86_64 100% | 57.1 MiB/s | 175.6 KiB | 00m00s [115/183] libunistring-0:1.1-11.fc44.x8 100% | 89.2 MiB/s | 547.8 KiB | 00m00s [116/183] nettle-0:3.10.1-3.fc44.x86_64 100% | 69.7 MiB/s | 428.0 KiB | 00m00s [117/183] p11-kit-0:0.26.2-1.fc44.x86_6 100% | 90.4 MiB/s | 555.7 KiB | 00m00s [118/183] cyrus-sasl-lib-0:2.1.28-35.fc 100% | 195.5 MiB/s | 800.7 KiB | 00m00s [119/183] libtool-ltdl-0:2.5.4-10.fc44. 100% | 18.1 MiB/s | 37.0 KiB | 00m00s [120/183] libevent-0:2.1.12-17.fc44.x86 100% | 70.2 MiB/s | 287.4 KiB | 00m00s [121/183] libffi-0:3.5.2-2.fc44.x86_64 100% | 20.7 MiB/s | 42.4 KiB | 00m00s [122/183] gdbm-libs-1:1.23-11.fc44.x86_ 100% | 28.7 MiB/s | 58.8 KiB | 00m00s [123/183] libcap-0:2.78-1.fc44.x86_64 100% | 43.0 MiB/s | 88.1 KiB | 00m00s [124/183] elfutils-libelf-0:0.195-1.fc4 100% | 102.5 MiB/s | 210.0 KiB | 00m00s [125/183] elfutils-libs-0:0.195-1.fc44. 100% | 92.1 MiB/s | 283.0 KiB | 00m00s [126/183] rpm-sequoia-0:1.10.2-1.fc44.x 100% | 149.1 MiB/s | 916.2 KiB | 00m00s [127/183] elfutils-debuginfod-client-0: 100% | 22.6 MiB/s | 46.2 KiB | 00m00s [128/183] elfutils-0:0.195-1.fc44.x86_6 100% | 143.6 MiB/s | 588.4 KiB | 00m00s [129/183] file-0:5.46-10.fc44.x86_64 100% | 23.8 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curl-0:8.18.0-6.fc44.x86_64 100% | 78.1 MiB/s | 240.0 KiB | 00m00s [143/183] R-srpm-macros-0:1.3.7-1.fc44. 100% | 3.6 MiB/s | 11.0 KiB | 00m00s [144/183] binutils-0:2.46-1.fc44.x86_64 100% | 305.3 MiB/s | 6.1 MiB | 00m00s [145/183] build-reproducibility-srpm-ma 100% | 1.9 MiB/s | 13.3 KiB | 00m00s [146/183] add-determinism-0:0.7.3-2.fc4 100% | 104.3 MiB/s | 854.6 KiB | 00m00s [147/183] pyproject-srpm-macros-0:1.21. 100% | 7.2 MiB/s | 14.8 KiB | 00m00s [148/183] linkdupes-0:0.7.3-2.fc44.x86_ 100% | 112.2 MiB/s | 344.8 KiB | 00m00s [149/183] p11-kit-trust-0:0.26.2-1.fc44 100% | 71.5 MiB/s | 146.4 KiB | 00m00s [150/183] qt6-srpm-macros-0:6.10.3-1.fc 100% | 4.5 MiB/s | 9.2 KiB | 00m00s [151/183] libcap-ng-0:0.9.3-1.fc44.x86_ 100% | 16.7 MiB/s | 34.2 KiB | 00m00s [152/183] libsmartcols-0:2.41.4-7.fc44. 100% | 42.4 MiB/s | 86.9 KiB | 00m00s [153/183] libfdisk-0:2.41.4-7.fc44.x86_ 100% | 54.8 MiB/s | 168.3 KiB | 00m00s [154/183] liblastlog2-0:2.41.4-7.fc44.x 100% | 11.5 MiB/s | 23.5 KiB | 00m00s [155/183] ca-certificates-0:2025.2.80_v 100% | 238.0 MiB/s | 974.8 KiB | 00m00s [156/183] elfutils-default-yama-scope-0 100% | 3.7 MiB/s | 11.2 KiB | 00m00s [157/183] libgcrypt-0:1.12.2-1.fc44.x86 100% | 123.0 MiB/s | 629.8 KiB | 00m00s [158/183] fedora-release-0:44-17.noarch 100% | 12.2 MiB/s | 12.5 KiB | 00m00s [159/183] systemd-standalone-sysusers-0 100% | 73.7 MiB/s | 151.0 KiB | 00m00s [160/183] xxhash-libs-0:0.8.3-4.fc44.x8 100% | 20.1 MiB/s | 41.2 KiB | 00m00s [161/183] fedora-release-identity-basic 100% | 13.0 MiB/s | 13.3 KiB | 00m00s [162/183] libbrotli-0:1.2.0-3.fc44.x86_ 100% | 113.2 MiB/s | 347.8 KiB | 00m00s [163/183] libcurl-0:8.18.0-6.fc44.x86_6 100% | 88.8 MiB/s | 454.8 KiB | 00m00s [164/183] libnghttp2-0:1.68.0-3.fc44.x8 100% | 37.7 MiB/s | 77.2 KiB | 00m00s [165/183] libnghttp3-0:1.15.0-1.fc44.x8 100% | 36.1 MiB/s | 73.9 KiB | 00m00s [166/183] libpsl-0:0.21.5-7.fc44.x86_64 100% | 31.9 MiB/s | 65.3 KiB | 00m00s [167/183] libssh-0:0.12.0-1.fc44.x86_64 100% | 143.4 MiB/s | 293.8 KiB | 00m00s [168/183] publicsuffix-list-dafsa-0:202 100% | 58.9 MiB/s | 60.3 KiB | 00m00s [169/183] libfido2-0:1.16.0-5.fc44.x86_ 100% | 51.0 MiB/s | 104.5 KiB | 00m00s [170/183] libssh-config-0:0.12.0-1.fc44 100% | 4.6 MiB/s | 9.4 KiB | 00m00s [171/183] gdb-minimal-0:17.1-4.fc44.x86 100% | 215.1 MiB/s | 4.7 MiB | 00m00s [172/183] libcbor-0:0.13.0-2.fc44.x86_6 100% | 7.0 MiB/s | 36.0 KiB | 00m00s [173/183] selinux-policy-0:44.1-1.fc44. 100% | 23.9 MiB/s | 73.3 KiB | 00m00s [174/183] policycoreutils-0:3.10-1.fc44 100% | 63.2 MiB/s | 258.7 KiB | 00m00s [175/183] rpm-plugin-selinux-0:6.0.1-2. 100% | 9.4 MiB/s | 19.2 KiB | 00m00s [176/183] libselinux-utils-0:3.10-1.fc4 100% | 38.9 MiB/s | 119.6 KiB | 00m00s [177/183] keyutils-libs-0:1.6.3-7.fc44. 100% | 15.4 MiB/s | 31.5 KiB | 00m00s [178/183] krb5-libs-0:1.22.2-4.fc44.x86 100% | 156.8 MiB/s | 802.6 KiB | 00m00s [179/183] libcom_err-0:1.47.3-4.fc44.x8 100% | 26.5 MiB/s | 27.1 KiB | 00m00s [180/183] libverto-0:0.3.2-12.fc44.x86_ 100% | 20.6 MiB/s | 21.1 KiB | 00m00s [181/183] selinux-policy-targeted-0:44. 100% | 262.4 MiB/s | 6.8 MiB | 00m00s [182/183] ngtcp2-crypto-ossl-0:1.22.1-1 100% | 3.9 MiB/s | 27.8 KiB | 00m00s [183/183] ngtcp2-0:1.22.1-1.fc44.x86_64 100% | 17.1 MiB/s | 157.4 KiB | 00m00s -------------------------------------------------------------------------------- [183/183] Total 100% | 229.7 MiB/s | 68.9 MiB | 00m00s Running transaction Importing OpenPGP key 0x6D9F90A6: UserID : "Fedora (44) " Fingerprint: 36F612DCF27F7D1A48A835E4DBFCF71C6D9F90A6 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-44-primary The key was successfully imported. [ 1/185] Verify package files 100% | 655.0 B/s | 183.0 B | 00m00s [ 2/185] Prepare transaction 100% | 2.4 KiB/s | 183.0 B | 00m00s [ 3/185] Installing libgcc-0:16.1.1-1. 100% | 266.0 MiB/s | 272.3 KiB | 00m00s [ 4/185] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/185] Installing publicsuffix-list- 100% | 0.0 B/s | 71.1 KiB | 00m00s [ 6/185] Installing fedora-release-ide 100% | 0.0 B/s | 888.0 B | 00m00s [ 7/185] Installing fedora-gpg-keys-0: 100% | 29.6 MiB/s | 182.1 KiB | 00m00s [ 8/185] Installing fedora-repos-0:44- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 9/185] Installing fedora-release-com 100% | 24.3 MiB/s | 24.9 KiB | 00m00s [ 10/185] Installing fedora-release-0:4 100% | 13.5 KiB/s | 124.0 B | 00m00s >>> Running sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch >>> Finished sysusers scriptlet: setup-0:2.15.0-28.fc44.noarch >>> Scriptlet output: >>> Creating group 'adm' with GID 4. >>> Creating group 'audio' with GID 63. >>> Creating group 'cdrom' with GID 11. >>> Creating group 'clock' with GID 103. >>> Creating group 'dialout' with GID 18. >>> Creating group 'disk' with GID 6. >>> Creating group 'floppy' with GID 19. >>> Creating group 'ftp' with GID 50. >>> Creating group 'games' with GID 20. >>> Creating group 'input' with GID 104. >>> Creating group 'kmem' with GID 9. >>> Creating group 'kvm' with GID 36. >>> Creating group 'lock' with GID 54. >>> Creating group 'lp' with GID 7. >>> Creating group 'mail' with GID 12. >>> Creating group 'man' with GID 15. >>> Creating group 'mem' with GID 8. >>> Creating group 'nobody' with GID 65534. >>> Creating group 'render' with GID 105. >>> Creating group 'root' with GID 0. >>> Creating group 'sgx' with GID 106. >>> Creating group 'sys' with GID 3. >>> Creating group 'tape' with GID 33. >>> Creating group 'tty' with GID 5. >>> Creating group 'users' with GID 100. >>> Creating group 'utmp' with GID 22. >>> Creating group 'video' with GID 39. >>> Creating group 'wheel' with GID 10. >>> Creating user 'adm' (adm) with UID 3 and GID 4. >>> Creating group 'bin' with GID 1. >>> Creating user 'bin' (bin) with UID 1 and GID 1. >>> Creating group 'daemon' with GID 2. >>> Creating user 'daemon' (daemon) with UID 2 and GID 2. >>> Creating user 'ftp' (FTP User) with UID 14 and GID 50. >>> Creating user 'games' (games) with UID 12 and GID 100. >>> Creating user 'halt' (halt) with UID 7 and GID 0. >>> Creating user 'lp' (lp) with UID 4 and GID 7. >>> Creating user 'mail' (mail) with UID 8 and GID 12. >>> Creating user 'nobody' (Kernel Overflow User) with UID 65534 and GID 65534. >>> Creating user 'operator' (operator) with UID 11 and GID 0. >>> Creating user 'root' (Super User) with UID 0 and GID 0. >>> Creating user 'shutdown' (shutdown) with UID 6 and GID 0. >>> Creating user 'sync' (sync) with UID 5 and GID 0. >>> [ 11/185] Installing setup-0:2.15.0-28. 100% | 44.6 MiB/s | 730.6 KiB | 00m00s >>> [RPM] /etc/hosts created as /etc/hosts.rpmnew [ 12/185] Installing filesystem-0:3.18- 100% | 2.1 MiB/s | 212.8 KiB | 00m00s [ 13/185] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 748.0 B | 00m00s [ 14/185] Installing pkgconf-m4-0:2.5.1 100% | 0.0 B/s | 14.7 KiB | 00m00s [ 15/185] Installing pcre2-syntax-0:10. 100% | 277.7 MiB/s | 284.3 KiB | 00m00s [ 16/185] Installing gnulib-l10n-0:2024 100% | 161.6 MiB/s | 661.9 KiB | 00m00s [ 17/185] Installing coreutils-common-0 100% | 314.3 MiB/s | 10.7 MiB | 00m00s [ 18/185] Installing ncurses-base-0:6.6 100% | 57.8 MiB/s | 355.3 KiB | 00m00s [ 19/185] Installing bash-0:5.3.9-3.fc4 100% | 249.4 MiB/s | 8.5 MiB | 00m00s [ 20/185] Installing glibc-common-0:2.4 100% | 60.2 MiB/s | 1.0 MiB | 00m00s [ 21/185] Installing glibc-gconv-extra- 100% | 219.6 MiB/s | 7.5 MiB | 00m00s [ 22/185] Installing glibc-0:2.43-4.fc4 100% | 173.6 MiB/s | 6.9 MiB | 00m00s [ 23/185] Installing ncurses-libs-0:6.6 100% | 238.1 MiB/s | 975.4 KiB | 00m00s [ 24/185] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 25/185] Installing zlib-ng-compat-0:2 100% | 162.6 MiB/s | 166.5 KiB | 00m00s [ 26/185] Installing bzip2-libs-0:1.0.8 100% | 79.7 MiB/s | 81.6 KiB | 00m00s [ 27/185] Installing libgpg-error-0:1.5 100% | 57.8 MiB/s | 947.5 KiB | 00m00s [ 28/185] Installing libstdc++-0:16.1.1 100% | 343.7 MiB/s | 3.1 MiB | 00m00s [ 29/185] Installing libassuan-0:2.5.7- 100% | 161.8 MiB/s | 165.7 KiB | 00m00s [ 30/185] Installing libgcrypt-0:1.12.2 100% | 331.7 MiB/s | 1.7 MiB | 00m00s [ 31/185] Installing readline-0:8.3-4.f 100% | 254.7 MiB/s | 521.6 KiB | 00m00s [ 32/185] Installing gmp-1:6.3.0-5.fc44 100% | 266.1 MiB/s | 817.5 KiB | 00m00s [ 33/185] Installing xz-libs-1:5.8.2-2. 100% | 213.7 MiB/s | 218.8 KiB | 00m00s [ 34/185] Installing libuuid-0:2.41.4-7 100% | 37.4 MiB/s | 38.3 KiB | 00m00s [ 35/185] Installing systemd-libs-0:259 100% | 305.3 MiB/s | 2.4 MiB | 00m00s [ 36/185] Installing popt-0:1.19-10.fc4 100% | 45.3 MiB/s | 139.3 KiB | 00m00s [ 37/185] Installing libzstd-0:1.5.7-5. 100% | 311.6 MiB/s | 957.4 KiB | 00m00s [ 38/185] Installing elfutils-libelf-0: 100% | 387.3 MiB/s | 1.2 MiB | 00m00s [ 39/185] Installing npth-0:1.8-4.fc44. 100% | 49.4 MiB/s | 50.6 KiB | 00m00s [ 40/185] Installing libblkid-0:2.41.4- 100% | 268.8 MiB/s | 275.3 KiB | 00m00s [ 41/185] Installing libxcrypt-0:4.5.2- 100% | 144.5 MiB/s | 295.9 KiB | 00m00s [ 42/185] Installing libsepol-0:3.10-1. 100% | 283.5 MiB/s | 871.0 KiB | 00m00s [ 43/185] Installing sqlite-libs-0:3.51 100% | 318.1 MiB/s | 1.6 MiB | 00m00s [ 44/185] Installing gnupg2-gpgconf-0:2 100% | 18.9 MiB/s | 251.8 KiB | 00m00s [ 45/185] Installing libattr-0:2.5.2-8. 100% | 0.0 B/s | 25.2 KiB | 00m00s [ 46/185] Installing libacl-0:2.3.2-6.f 100% | 0.0 B/s | 36.6 KiB | 00m00s [ 47/185] Installing pcre2-0:10.47-1.fc 100% | 351.6 MiB/s | 720.0 KiB | 00m00s [ 48/185] Installing libselinux-0:3.10- 100% | 197.5 MiB/s | 202.3 KiB | 00m00s [ 49/185] Installing grep-0:3.12-3.fc44 100% | 59.0 MiB/s | 1.0 MiB | 00m00s [ 50/185] Installing sed-0:4.9-7.fc44.x 100% | 52.8 MiB/s | 865.4 KiB | 00m00s [ 51/185] Installing findutils-1:4.10.0 100% | 98.4 MiB/s | 1.9 MiB | 00m00s [ 52/185] Installing libtasn1-0:4.21.0- 100% | 178.2 MiB/s | 182.4 KiB | 00m00s [ 53/185] Installing libunistring-0:1.1 100% | 289.1 MiB/s | 1.7 MiB | 00m00s [ 54/185] Installing libidn2-0:2.3.8-3. 100% | 45.8 MiB/s | 562.6 KiB | 00m00s [ 55/185] Installing crypto-policies-0: 100% | 22.0 MiB/s | 157.7 KiB | 00m00s [ 56/185] Installing xz-1:5.8.2-2.fc44. 100% | 68.5 MiB/s | 1.4 MiB | 00m00s [ 57/185] Installing libmount-0:2.41.4- 100% | 190.3 MiB/s | 389.7 KiB | 00m00s [ 58/185] Installing gnupg2-verify-0:2. 100% | 27.2 MiB/s | 361.7 KiB | 00m00s [ 59/185] Installing dwz-0:0.16-3.fc44. 100% | 23.8 MiB/s | 292.3 KiB | 00m00s [ 60/185] Installing mpfr-0:4.2.2-3.fc4 100% | 276.9 MiB/s | 850.8 KiB | 00m00s [ 61/185] Installing gawk-0:5.3.2-3.fc4 100% | 96.5 MiB/s | 1.8 MiB | 00m00s [ 62/185] Installing libksba-0:1.6.7-5. 100% | 203.6 MiB/s | 416.9 KiB | 00m00s [ 63/185] Installing unzip-0:6.0-69.fc4 100% | 33.8 MiB/s | 449.3 KiB | 00m00s [ 64/185] Installing file-libs-0:5.46-1 100% | 593.2 MiB/s | 11.9 MiB | 00m00s [ 65/185] Installing file-0:5.46-10.fc4 100% | 8.3 MiB/s | 101.6 KiB | 00m00s [ 66/185] Installing diffutils-0:3.12-5 100% | 87.4 MiB/s | 1.6 MiB | 00m00s [ 67/185] Installing libeconf-0:0.7.9-3 100% | 64.9 MiB/s | 66.4 KiB | 00m00s [ 68/185] Installing lua-libs-0:5.4.8-5 100% | 276.6 MiB/s | 283.2 KiB | 00m00s [ 69/185] Installing json-c-0:0.18-8.fc 100% | 81.9 MiB/s | 83.9 KiB | 00m00s [ 70/185] Installing libffi-0:3.5.2-2.f 100% | 87.0 MiB/s | 89.1 KiB | 00m00s [ 71/185] Installing p11-kit-0:0.26.2-1 100% | 117.9 MiB/s | 2.6 MiB | 00m00s [ 72/185] Installing alternatives-0:1.3 100% | 5.2 MiB/s | 63.6 KiB | 00m00s [ 73/185] Installing p11-kit-trust-0:0. 100% | 21.3 MiB/s | 480.0 KiB | 00m00s [ 74/185] Installing libcap-ng-0:0.9.3- 100% | 69.0 MiB/s | 70.6 KiB | 00m00s [ 75/185] Installing audit-libs-0:4.1.4 100% | 191.9 MiB/s | 393.0 KiB | 00m00s [ 76/185] Installing pam-libs-0:1.7.2-1 100% | 129.8 MiB/s | 132.9 KiB | 00m00s [ 77/185] Installing libcap-0:2.78-1.fc 100% | 15.2 MiB/s | 217.2 KiB | 00m00s [ 78/185] Installing openssl-libs-1:3.5 100% | 353.4 MiB/s | 9.2 MiB | 00m00s [ 79/185] Installing coreutils-0:9.10-3 100% | 149.8 MiB/s | 5.7 MiB | 00m00s [ 80/185] Installing ca-certificates-0: 100% | 1.5 MiB/s | 2.5 MiB | 00m02s [ 81/185] Installing libsemanage-0:3.10 100% | 153.4 MiB/s | 314.1 KiB | 00m00s [ 82/185] Installing libsmartcols-0:2.4 100% | 184.9 MiB/s | 189.3 KiB | 00m00s [ 83/185] Installing ngtcp2-0:1.22.1-1. 100% | 165.9 MiB/s | 339.8 KiB | 00m00s [ 84/185] Installing ngtcp2-crypto-ossl 100% | 51.2 MiB/s | 52.5 KiB | 00m00s [ 85/185] Installing util-linux-core-0: 100% | 74.1 MiB/s | 1.5 MiB | 00m00s [ 86/185] Installing gzip-0:1.14-2.fc44 100% | 28.4 MiB/s | 407.1 KiB | 00m00s [ 87/185] Installing libfsverity-0:1.6- 100% | 28.7 MiB/s | 29.4 KiB | 00m00s [ 88/185] Installing libevent-0:2.1.12- 100% | 239.9 MiB/s | 982.4 KiB | 00m00s [ 89/185] Installing rpm-sequoia-0:1.10 100% | 295.5 MiB/s | 2.4 MiB | 00m00s [ 90/185] Installing zip-0:3.0-45.fc44. 100% | 49.0 MiB/s | 701.9 KiB | 00m00s [ 91/185] Installing gnupg2-keyboxd-0:2 100% | 24.7 MiB/s | 202.5 KiB | 00m00s [ 92/185] Installing libpsl-0:0.21.5-7. 100% | 75.6 MiB/s | 77.4 KiB | 00m00s [ 93/185] Installing tar-2:1.35-8.fc44. 100% | 129.5 MiB/s | 3.0 MiB | 00m00s [ 94/185] Installing linkdupes-0:0.7.3- 100% | 50.9 MiB/s | 782.3 KiB | 00m00s [ 95/185] Installing libselinux-utils-0 100% | 20.8 MiB/s | 320.1 KiB | 00m00s [ 96/185] Installing liblastlog2-0:2.41 100% | 4.9 MiB/s | 39.8 KiB | 00m00s [ 97/185] Installing systemd-standalone 100% | 21.4 MiB/s | 306.2 KiB | 00m00s [ 98/185] Installing rpm-libs-0:6.0.1-2 100% | 235.0 MiB/s | 962.8 KiB | 00m00s [ 99/185] Installing libfdisk-0:2.41.4- 100% | 126.7 MiB/s | 389.3 KiB | 00m00s [100/185] Installing util-linux-0:2.41. 100% | 83.3 MiB/s | 3.6 MiB | 00m00s [101/185] Installing policycoreutils-0: 100% | 28.7 MiB/s | 912.6 KiB | 00m00s [102/185] Installing selinux-policy-0:4 100% | 1.2 MiB/s | 33.6 KiB | 00m00s [103/185] Installing selinux-policy-tar 100% | 134.2 MiB/s | 14.9 MiB | 00m00s [104/185] Installing zstd-0:1.5.7-5.fc4 100% | 32.9 MiB/s | 506.0 KiB | 00m00s [105/185] Installing libusb1-0:1.0.29-5 100% | 15.7 MiB/s | 176.9 KiB | 00m00s >>> Running sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.x86_64 >>> Finished sysusers scriptlet: tpm2-tss-0:4.1.3-9.fc44.x86_64 >>> Scriptlet output: >>> Creating group 'tss' with GID 59. >>> Creating user 'tss' (Account used for TPM access) with UID 59 and GID 59. >>> [106/185] Installing tpm2-tss-0:4.1.3-9 100% | 233.3 MiB/s | 1.6 MiB | 00m00s [107/185] Installing ima-evm-utils-libs 100% | 60.4 MiB/s | 61.9 KiB | 00m00s [108/185] Installing gnupg2-gpg-agent-0 100% | 29.3 MiB/s | 690.5 KiB | 00m00s [109/185] Installing libxml2-0:2.12.10- 100% | 98.4 MiB/s | 1.8 MiB | 00m00s [110/185] Installing nettle-0:3.10.1-3. 100% | 259.6 MiB/s | 797.4 KiB | 00m00s [111/185] Installing gnutls-0:3.8.12-1. 100% | 287.4 MiB/s | 3.7 MiB | 00m00s [112/185] Installing bzip2-0:1.0.8-23.f 100% | 7.5 MiB/s | 99.5 KiB | 00m00s [113/185] Installing add-determinism-0: 100% | 121.2 MiB/s | 2.2 MiB | 00m00s [114/185] Installing build-reproducibil 100% | 0.0 B/s | 1.5 KiB | 00m00s [115/185] Installing cpio-0:2.15-9.fc44 100% | 64.9 MiB/s | 1.1 MiB | 00m00s [116/185] Installing ed-0:1.22.5-2.fc44 100% | 12.4 MiB/s | 152.0 KiB | 00m00s [117/185] Installing patch-0:2.8-4.fc44 100% | 18.6 MiB/s | 228.1 KiB | 00m00s [118/185] Installing libtool-ltdl-0:2.5 100% | 69.5 MiB/s | 71.1 KiB | 00m00s [119/185] Installing gdbm-libs-1:1.23-1 100% | 128.3 MiB/s | 131.3 KiB | 00m00s [120/185] Installing cyrus-sasl-lib-0:2 100% | 121.6 MiB/s | 2.3 MiB | 00m00s [121/185] Installing openldap-0:2.6.13- 100% | 164.5 MiB/s | 673.7 KiB | 00m00s [122/185] Installing gnupg2-dirmngr-0:2 100% | 28.3 MiB/s | 636.7 KiB | 00m00s [123/185] Installing gnupg2-0:2.4.9-7.f 100% | 197.1 MiB/s | 6.5 MiB | 00m00s [124/185] Installing rpm-sign-libs-0:6. 100% | 39.5 MiB/s | 40.5 KiB | 00m00s [125/185] Installing gpgverify-0:2.2-4. 100% | 9.2 MiB/s | 9.4 KiB | 00m00s [126/185] Installing libgomp-0:16.1.1-1 100% | 284.6 MiB/s | 582.8 KiB | 00m00s [127/185] Installing lz4-libs-0:1.10.0- 100% | 154.6 MiB/s | 158.4 KiB | 00m00s [128/185] Installing libarchive-0:3.8.7 100% | 244.5 MiB/s | 1.0 MiB | 00m00s [129/185] Installing jansson-0:2.14-4.f 100% | 88.2 MiB/s | 90.3 KiB | 00m00s [130/185] Installing libpkgconf-0:2.5.1 100% | 89.1 MiB/s | 91.3 KiB | 00m00s [131/185] Installing pkgconf-0:2.5.1-1. 100% | 7.2 MiB/s | 95.2 KiB | 00m00s [132/185] Installing pkgconf-pkg-config 100% | 147.8 KiB/s | 1.8 KiB | 00m00s [133/185] Installing xxhash-libs-0:0.8. 100% | 93.2 MiB/s | 95.4 KiB | 00m00s [134/185] Installing libbrotli-0:1.2.0- 100% | 282.3 MiB/s | 867.3 KiB | 00m00s [135/185] Installing libnghttp2-0:1.68. 100% | 163.3 MiB/s | 167.3 KiB | 00m00s [136/185] Installing libnghttp3-0:1.15. 100% | 156.8 MiB/s | 160.6 KiB | 00m00s [137/185] Installing libcbor-0:0.13.0-2 100% | 79.0 MiB/s | 80.9 KiB | 00m00s [138/185] Installing libfido2-0:1.16.0- 100% | 121.1 MiB/s | 247.9 KiB | 00m00s [139/185] Installing keyutils-libs-0:1. 100% | 54.3 MiB/s | 55.6 KiB | 00m00s [140/185] Installing libcom_err-0:1.47. 100% | 62.6 MiB/s | 64.1 KiB | 00m00s [141/185] Installing libverto-0:0.3.2-1 100% | 26.4 MiB/s | 27.1 KiB | 00m00s [142/185] Installing krb5-libs-0:1.22.2 100% | 239.5 MiB/s | 2.4 MiB | 00m00s [143/185] Installing libssh-0:0.12.0-1. 100% | 234.8 MiB/s | 721.2 KiB | 00m00s [144/185] Installing libcurl-0:8.18.0-6 100% | 249.5 MiB/s | 1.0 MiB | 00m00s [145/185] Installing curl-0:8.18.0-6.fc 100% | 19.6 MiB/s | 482.6 KiB | 00m00s [146/185] Installing rpm-0:6.0.1-2.fc44 100% | 65.4 MiB/s | 2.6 MiB | 00m00s [147/185] Installing cmake-srpm-macros- 100% | 0.0 B/s | 804.0 B | 00m00s [148/185] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [149/185] Installing java-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [150/185] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [151/185] Installing tree-sitter-srpm-m 100% | 0.0 B/s | 9.3 KiB | 00m00s [152/185] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [153/185] Installing filesystem-srpm-ma 100% | 0.0 B/s | 38.9 KiB | 00m00s [154/185] Installing elfutils-default-y 100% | 291.9 KiB/s | 2.0 KiB | 00m00s [155/185] Installing elfutils-libs-0:0. 100% | 175.1 MiB/s | 717.1 KiB | 00m00s [156/185] Installing elfutils-debuginfo 100% | 6.5 MiB/s | 86.1 KiB | 00m00s [157/185] Installing elfutils-0:0.195-1 100% | 135.3 MiB/s | 3.0 MiB | 00m00s [158/185] Installing binutils-0:2.46-1. 100% | 287.1 MiB/s | 27.3 MiB | 00m00s [159/185] Installing gdb-minimal-0:17.1 100% | 240.6 MiB/s | 14.2 MiB | 00m00s [160/185] Installing debugedit-0:5.3-2. 100% | 16.8 MiB/s | 224.0 KiB | 00m00s [161/185] Installing rpm-build-libs-0:6 100% | 135.3 MiB/s | 277.1 KiB | 00m00s [162/185] Installing rust-srpm-macros-0 100% | 0.0 B/s | 6.4 KiB | 00m00s [163/185] Installing qt5-srpm-macros-0: 100% | 0.0 B/s | 776.0 B | 00m00s [164/185] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [165/185] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [166/185] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [167/185] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.1 KiB | 00m00s [168/185] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [169/185] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [170/185] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [171/185] Installing gap-srpm-macros-0: 100% | 0.0 B/s | 2.7 KiB | 00m00s [172/185] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [173/185] Installing ansible-srpm-macro 100% | 35.4 MiB/s | 36.2 KiB | 00m00s [174/185] Installing redhat-rpm-config- 100% | 92.7 MiB/s | 189.9 KiB | 00m00s [175/185] Installing forge-srpm-macros- 100% | 7.9 MiB/s | 40.3 KiB | 00m00s [176/185] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [177/185] Installing go-srpm-macros-0:3 100% | 61.6 MiB/s | 63.0 KiB | 00m00s [178/185] Installing rpm-build-0:6.0.1- 100% | 19.8 MiB/s | 303.7 KiB | 00m00s [179/185] Installing pyproject-srpm-mac 100% | 0.0 B/s | 3.6 KiB | 00m00s [180/185] Installing python-srpm-macros 100% | 51.7 MiB/s | 52.9 KiB | 00m00s [181/185] Installing R-srpm-macros-0:1. 100% | 0.0 B/s | 4.4 KiB | 00m00s [182/185] Installing rpm-plugin-selinux 100% | 12.6 MiB/s | 12.9 KiB | 00m00s [183/185] Installing shadow-utils-2:4.1 100% | 111.9 MiB/s | 4.0 MiB | 00m00s [184/185] Installing which-0:2.23-4.fc4 100% | 6.4 MiB/s | 85.6 KiB | 00m00s [185/185] Installing info-0:7.2-9.fc44. 100% | 44.0 KiB/s | 366.0 KiB | 00m08s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: R-srpm-macros-1.3.7-1.fc44.noarch add-determinism-0.7.3-2.fc44.x86_64 alternatives-1.33-5.fc44.x86_64 ansible-srpm-macros-1-20.1.fc44.noarch audit-libs-4.1.4-1.fc44.x86_64 bash-5.3.9-3.fc44.x86_64 binutils-2.46-1.fc44.x86_64 build-reproducibility-srpm-macros-0.7.3-2.fc44.noarch bzip2-1.0.8-23.fc44.x86_64 bzip2-libs-1.0.8-23.fc44.x86_64 ca-certificates-2025.2.80_v9.0.304-7.fc44.noarch cmake-srpm-macros-4.3.0-1.fc44.noarch coreutils-9.10-3.fc44.x86_64 coreutils-common-9.10-3.fc44.x86_64 cpio-2.15-9.fc44.x86_64 crypto-policies-20251128-3.git19878fe.fc44.noarch curl-8.18.0-6.fc44.x86_64 cyrus-sasl-lib-2.1.28-35.fc44.x86_64 debugedit-5.3-2.fc44.x86_64 diffutils-3.12-5.fc44.x86_64 dwz-0.16-3.fc44.x86_64 ed-1.22.5-2.fc44.x86_64 efi-srpm-macros-6-6.fc44.noarch elfutils-0.195-1.fc44.x86_64 elfutils-debuginfod-client-0.195-1.fc44.x86_64 elfutils-default-yama-scope-0.195-1.fc44.noarch elfutils-libelf-0.195-1.fc44.x86_64 elfutils-libs-0.195-1.fc44.x86_64 fedora-gpg-keys-44-1.noarch fedora-release-44-17.noarch fedora-release-common-44-17.noarch fedora-release-identity-basic-44-17.noarch fedora-repos-44-1.noarch file-5.46-10.fc44.x86_64 file-libs-5.46-10.fc44.x86_64 filesystem-3.18-52.fc44.x86_64 filesystem-srpm-macros-3.18-52.fc44.noarch findutils-4.10.0-7.fc44.x86_64 fonts-srpm-macros-5.0.0-2.fc44.noarch forge-srpm-macros-0.4.0-4.fc44.noarch fpc-srpm-macros-1.3-16.fc44.noarch gap-srpm-macros-2-2.fc44.noarch gawk-5.3.2-3.fc44.x86_64 gdb-minimal-17.1-4.fc44.x86_64 gdbm-libs-1.23-11.fc44.x86_64 ghc-srpm-macros-1.10-1.fc44.noarch glibc-2.43-4.fc44.x86_64 glibc-common-2.43-4.fc44.x86_64 glibc-gconv-extra-2.43-4.fc44.x86_64 glibc-minimal-langpack-2.43-4.fc44.x86_64 gmp-6.3.0-5.fc44.x86_64 gnat-srpm-macros-7-2.fc44.noarch gnulib-l10n-20241231-2.fc44.noarch gnupg2-2.4.9-7.fc44.x86_64 gnupg2-dirmngr-2.4.9-7.fc44.x86_64 gnupg2-gpg-agent-2.4.9-7.fc44.x86_64 gnupg2-gpgconf-2.4.9-7.fc44.x86_64 gnupg2-keyboxd-2.4.9-7.fc44.x86_64 gnupg2-verify-2.4.9-7.fc44.x86_64 gnutls-3.8.12-1.fc44.x86_64 go-srpm-macros-3.8.0-2.fc44.noarch gpg-pubkey-36f612dcf27f7d1a48a835e4dbfcf71c6d9f90a6-6786af3b gpgverify-2.2-4.fc44.noarch grep-3.12-3.fc44.x86_64 gzip-1.14-2.fc44.x86_64 ima-evm-utils-libs-1.6.2-8.fc44.x86_64 info-7.2-9.fc44.x86_64 jansson-2.14-4.fc44.x86_64 java-srpm-macros-1-8.fc44.noarch json-c-0.18-8.fc44.x86_64 kernel-srpm-macros-1.0-28.fc44.noarch keyutils-libs-1.6.3-7.fc44.x86_64 krb5-libs-1.22.2-4.fc44.x86_64 libacl-2.3.2-6.fc44.x86_64 libarchive-3.8.7-1.fc44.x86_64 libassuan-2.5.7-5.fc44.x86_64 libattr-2.5.2-8.fc44.x86_64 libblkid-2.41.4-7.fc44.x86_64 libbrotli-1.2.0-3.fc44.x86_64 libcap-2.78-1.fc44.x86_64 libcap-ng-0.9.3-1.fc44.x86_64 libcbor-0.13.0-2.fc44.x86_64 libcom_err-1.47.3-4.fc44.x86_64 libcurl-8.18.0-6.fc44.x86_64 libeconf-0.7.9-3.fc44.x86_64 libevent-2.1.12-17.fc44.x86_64 libfdisk-2.41.4-7.fc44.x86_64 libffi-3.5.2-2.fc44.x86_64 libfido2-1.16.0-5.fc44.x86_64 libfsverity-1.6-4.fc44.x86_64 libgcc-16.1.1-1.fc44.x86_64 libgcrypt-1.12.2-1.fc44.x86_64 libgomp-16.1.1-1.fc44.x86_64 libgpg-error-1.58-2.fc44.x86_64 libidn2-2.3.8-3.fc44.x86_64 libksba-1.6.7-5.fc44.x86_64 liblastlog2-2.41.4-7.fc44.x86_64 libmount-2.41.4-7.fc44.x86_64 libnghttp2-1.68.0-3.fc44.x86_64 libnghttp3-1.15.0-1.fc44.x86_64 libpkgconf-2.5.1-1.fc44.x86_64 libpsl-0.21.5-7.fc44.x86_64 libselinux-3.10-1.fc44.x86_64 libselinux-utils-3.10-1.fc44.x86_64 libsemanage-3.10-1.fc44.x86_64 libsepol-3.10-1.fc44.x86_64 libsmartcols-2.41.4-7.fc44.x86_64 libssh-0.12.0-1.fc44.x86_64 libssh-config-0.12.0-1.fc44.noarch libstdc++-16.1.1-1.fc44.x86_64 libtasn1-4.21.0-1.fc44.x86_64 libtool-ltdl-2.5.4-10.fc44.x86_64 libunistring-1.1-11.fc44.x86_64 libusb1-1.0.29-5.fc44.x86_64 libuuid-2.41.4-7.fc44.x86_64 libverto-0.3.2-12.fc44.x86_64 libxcrypt-4.5.2-3.fc44.x86_64 libxml2-2.12.10-6.fc44.x86_64 libzstd-1.5.7-5.fc44.x86_64 linkdupes-0.7.3-2.fc44.x86_64 lua-libs-5.4.8-5.fc44.x86_64 lua-srpm-macros-1-17.fc44.noarch lz4-libs-1.10.0-4.fc44.x86_64 mpfr-4.2.2-3.fc44.x86_64 ncurses-base-6.6-1.fc44.noarch ncurses-libs-6.6-1.fc44.x86_64 nettle-3.10.1-3.fc44.x86_64 ngtcp2-1.22.1-1.fc44.x86_64 ngtcp2-crypto-ossl-1.22.1-1.fc44.x86_64 npth-1.8-4.fc44.x86_64 ocaml-srpm-macros-11-3.fc44.noarch openblas-srpm-macros-2-21.fc44.noarch openldap-2.6.13-1.fc44.x86_64 openssl-libs-3.5.5-2.fc44.x86_64 p11-kit-0.26.2-1.fc44.x86_64 p11-kit-trust-0.26.2-1.fc44.x86_64 package-notes-srpm-macros-0.5-16.fc44.noarch pam-libs-1.7.2-1.fc44.x86_64 patch-2.8-4.fc44.x86_64 pcre2-10.47-1.fc44.1.x86_64 pcre2-syntax-10.47-1.fc44.1.noarch perl-srpm-macros-1-61.fc44.noarch pkgconf-2.5.1-1.fc44.x86_64 pkgconf-m4-2.5.1-1.fc44.noarch pkgconf-pkg-config-2.5.1-1.fc44.x86_64 policycoreutils-3.10-1.fc44.x86_64 popt-1.19-10.fc44.x86_64 publicsuffix-list-dafsa-20260116-1.fc44.noarch pyproject-srpm-macros-1.21.0-1.fc44.noarch python-srpm-macros-3.14-12.fc44.noarch qt5-srpm-macros-5.15.18-2.fc44.noarch qt6-srpm-macros-6.10.3-1.fc44.noarch readline-8.3-4.fc44.x86_64 redhat-rpm-config-343-19.fc44.noarch rpm-6.0.1-2.fc44.x86_64 rpm-build-6.0.1-2.fc44.x86_64 rpm-build-libs-6.0.1-2.fc44.x86_64 rpm-libs-6.0.1-2.fc44.x86_64 rpm-plugin-selinux-6.0.1-2.fc44.x86_64 rpm-sequoia-1.10.2-1.fc44.x86_64 rpm-sign-libs-6.0.1-2.fc44.x86_64 rust-srpm-macros-28.4-3.fc44.noarch sed-4.9-7.fc44.x86_64 selinux-policy-44.1-1.fc44.noarch selinux-policy-targeted-44.1-1.fc44.noarch setup-2.15.0-28.fc44.noarch shadow-utils-4.19.0-7.fc44.x86_64 sqlite-libs-3.51.2-1.fc44.x86_64 systemd-libs-259.5-1.fc44.x86_64 systemd-standalone-sysusers-259.5-1.fc44.x86_64 tar-1.35-8.fc44.x86_64 tpm2-tss-4.1.3-9.fc44.x86_64 tree-sitter-srpm-macros-0.4.2-2.fc44.noarch unzip-6.0-69.fc44.x86_64 util-linux-2.41.4-7.fc44.x86_64 util-linux-core-2.41.4-7.fc44.x86_64 which-2.23-4.fc44.x86_64 xxhash-libs-0.8.3-4.fc44.x86_64 xz-5.8.2-2.fc44.x86_64 xz-libs-5.8.2-2.fc44.x86_64 zig-srpm-macros-1-8.fc44.noarch zip-3.0-45.fc44.x86_64 zlib-ng-compat-2.3.3-3.fc44.x86_64 zstd-1.5.7-5.fc44.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1777939200 Wrote: /builddir/build/SRPMS/mrtrix3-3.0.8-3.fc44.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-44-x86_64-1777994715.390577/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-dnaoelf0/mrtrix3/mrtrix3.spec) Config(child) 0 minutes 29 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/mrtrix3-3.0.8-3.fc44.src.rpm) Config(fedora-44-x86_64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-bootstrap-1777994715.390577/root. INFO: reusing tmpfs at /var/lib/mock/fedora-44-x86_64-bootstrap-1777994715.390577/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-44-x86_64-1777994715.390577/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-6.0.1-2.fc44.x86_64 rpm-sequoia-1.10.2-1.fc44.x86_64 dnf5-5.4.2.0-1.fc44.x86_64 dnf5-plugins-5.4.2.0-1.fc44.x86_64 Finish: chroot init Start: build phase for mrtrix3-3.0.8-3.fc44.src.rpm Start: build setup for mrtrix3-3.0.8-3.fc44.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1777939200 Wrote: /builddir/build/SRPMS/mrtrix3-3.0.8-3.fc44.src.rpm Updating and loading repositories: updates 100% | 204.4 KiB/s | 46.6 KiB | 00m00s fedora 100% | 219.3 KiB/s | 45.2 KiB | 00m00s Copr repository 100% | 8.2 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: fftw-devel x86_64 0:3.3.10-17.fc44 fedora 283.1 KiB gcc-c++ x86_64 0:16.1.1-1.fc44 updates 46.3 MiB git x86_64 0:2.54.0-1.fc44 updates 57.7 KiB libpng-devel x86_64 2:1.6.56-1.fc44 updates 905.1 KiB libtiff-devel x86_64 0:4.7.1-2.fc44 fedora 805.2 KiB mesa-libGL-devel x86_64 0:26.0.5-3.fc44 updates 80.8 KiB mesa-libGLU-devel x86_64 0:9.0.3-8.fc44 fedora 17.0 KiB python3 x86_64 0:3.14.4-2.fc44 updates 28.7 KiB python3-devel x86_64 0:3.14.4-2.fc44 updates 2.0 MiB qt5-qtbase-devel x86_64 0:5.15.18-2.fc44 fedora 19.0 MiB qt5-qtsvg-devel x86_64 0:5.15.18-2.fc44 fedora 83.6 KiB zlib-ng-compat-devel x86_64 0:2.3.3-3.fc44 fedora 107.0 KiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0:0.301-17.fc44 fedora 192.7 KiB annobin-docs noarch 0:13.14-1.fc44 updates 99.3 KiB annobin-plugin-gcc x86_64 0:13.14-1.fc44 updates 699.3 KiB avahi-libs x86_64 0:0.9~rc2-8.fc44 fedora 179.2 KiB cmake x86_64 0:4.3.0-1.fc44 fedora 40.5 MiB cmake-data noarch 0:4.3.0-1.fc44 fedora 9.4 MiB cmake-filesystem x86_64 0:4.3.0-1.fc44 fedora 0.0 B cmake-rpm-macros noarch 0:4.3.0-1.fc44 fedora 8.4 KiB cpp x86_64 0:16.1.1-1.fc44 updates 42.1 MiB cups-filesystem noarch 1:2.4.18-1.fc44 updates 0.0 B cups-libs x86_64 1:2.4.18-1.fc44 updates 634.6 KiB dbus-libs x86_64 1:1.16.2-1.fc44 fedora 357.4 KiB default-fonts-core-sans noarch 0:4.3-1.fc44 fedora 11.9 KiB double-conversion x86_64 0:3.4.0-3.fc44 fedora 101.8 KiB duktape x86_64 0:2.7.0-11.fc44 fedora 623.6 KiB emacs-filesystem x86_64 1:30.2-2.fc44 fedora 0.0 B expat x86_64 0:2.7.3-2.fc44 fedora 316.8 KiB fftw x86_64 0:3.3.10-17.fc44 fedora 181.4 KiB fftw-libs x86_64 0:3.3.10-17.fc44 fedora 0.0 B fftw-libs-double x86_64 0:3.3.10-17.fc44 fedora 3.4 MiB fftw-libs-long x86_64 0:3.3.10-17.fc44 fedora 1.5 MiB fftw-libs-quad x86_64 0:3.3.10-17.fc44 fedora 2.5 MiB fftw-libs-single x86_64 0:3.3.10-17.fc44 fedora 3.6 MiB fontconfig x86_64 0:2.17.0-4.fc44 fedora 776.4 KiB fonts-filesystem noarch 1:5.0.0-2.fc44 fedora 0.0 B freetype x86_64 0:2.14.3-1.fc44 updates 918.3 KiB gcc x86_64 0:16.1.1-1.fc44 updates 120.8 MiB gcc-plugin-annobin x86_64 0:16.1.1-1.fc44 updates 57.1 KiB git-core x86_64 0:2.54.0-1.fc44 updates 25.1 MiB git-core-doc noarch 0:2.54.0-1.fc44 updates 18.7 MiB glib2 x86_64 0:2.88.0-1.fc44 fedora 15.3 MiB glibc-devel x86_64 0:2.43-4.fc44 updates 2.3 MiB glx-utils x86_64 0:9.0.0-11.fc44 fedora 418.0 KiB google-noto-fonts-common noarch 0:20251201-2.fc44 fedora 17.7 KiB google-noto-sans-vf-fonts noarch 0:20251201-2.fc44 fedora 1.4 MiB graphite2 x86_64 0:1.3.14-20.fc44 fedora 191.5 KiB groff-base x86_64 0:1.23.0-12.fc44 fedora 3.9 MiB harfbuzz x86_64 0:14.1.0-2.fc44 updates 2.8 MiB hwdata noarch 0:0.406-1.fc44 updates 9.9 MiB jbigkit-libs x86_64 0:2.1-33.fc44 fedora 117.2 KiB jsoncpp x86_64 0:1.9.6-3.fc44 fedora 285.6 KiB kernel-headers x86_64 0:6.19.6-300.fc44 fedora 6.9 MiB less x86_64 0:692-5.fc44 updates 466.8 KiB libICE x86_64 0:1.1.2-4.fc44 fedora 198.3 KiB libSM x86_64 0:1.2.5-4.fc44 fedora 100.9 KiB libX11 x86_64 0:1.8.13-1.fc44 fedora 1.3 MiB libX11-common noarch 0:1.8.13-1.fc44 fedora 1.1 MiB libX11-devel x86_64 0:1.8.13-1.fc44 fedora 1.0 MiB libX11-xcb x86_64 0:1.8.13-1.fc44 fedora 10.8 KiB libXau x86_64 0:1.0.12-4.fc44 fedora 72.8 KiB libXau-devel x86_64 0:1.0.12-4.fc44 fedora 7.3 KiB libXext x86_64 0:1.3.6-5.fc44 fedora 89.8 KiB libXxf86vm x86_64 0:1.1.6-4.fc44 fedora 25.1 KiB libatomic x86_64 0:16.1.1-1.fc44 updates 45.5 KiB libdrm x86_64 0:2.4.133-1.fc44 updates 405.8 KiB libdrm-devel x86_64 0:2.4.133-1.fc44 updates 742.7 KiB libedit x86_64 0:3.1-58.20251016cvs.fc44 fedora 248.1 KiB libevdev x86_64 0:1.13.6-2.fc44 fedora 89.9 KiB libglvnd x86_64 1:1.7.0-9.fc44 fedora 526.5 KiB libglvnd-core-devel x86_64 1:1.7.0-9.fc44 fedora 40.3 KiB libglvnd-devel x86_64 1:1.7.0-9.fc44 fedora 2.1 MiB libglvnd-egl x86_64 1:1.7.0-9.fc44 fedora 68.6 KiB libglvnd-gles x86_64 1:1.7.0-9.fc44 fedora 97.7 KiB libglvnd-glx x86_64 1:1.7.0-9.fc44 fedora 601.0 KiB libglvnd-opengl x86_64 1:1.7.0-9.fc44 fedora 144.7 KiB libgudev x86_64 0:238-9.fc44 fedora 91.7 KiB libicu x86_64 0:77.1-2.fc44 fedora 36.6 MiB libinput x86_64 0:1.31.1-1.fc44 updates 695.1 KiB libjpeg-turbo x86_64 0:3.1.3-1.fc44 fedora 818.2 KiB libjpeg-turbo-devel x86_64 0:3.1.3-1.fc44 fedora 353.9 KiB liblerc x86_64 0:4.0.0-10.fc44 fedora 647.9 KiB liblerc-devel x86_64 0:4.0.0-10.fc44 fedora 4.3 MiB libmpc x86_64 0:1.4.1-1.fc44 updates 168.7 KiB libpciaccess x86_64 0:0.16-17.fc44 fedora 48.4 KiB libpciaccess-devel x86_64 0:0.16-17.fc44 fedora 15.3 KiB libpng x86_64 2:1.6.56-1.fc44 updates 249.6 KiB libproxy x86_64 0:0.5.12-2.fc44 fedora 102.1 KiB libquadmath x86_64 0:16.1.1-1.fc44 updates 325.9 KiB libstdc++-devel x86_64 0:16.1.1-1.fc44 updates 41.2 MiB libtiff x86_64 0:4.7.1-2.fc44 fedora 640.2 KiB libuv x86_64 1:1.51.0-3.fc44 fedora 582.8 KiB libwacom x86_64 0:2.18.0-1.fc44 fedora 109.8 KiB libwacom-data noarch 0:2.18.0-1.fc44 fedora 1.4 MiB libwayland-client x86_64 0:1.24.0-3.fc44 fedora 61.9 KiB libwebp x86_64 0:1.6.0-3.fc44 fedora 968.0 KiB libwebp-devel x86_64 0:1.6.0-3.fc44 fedora 121.7 KiB libxcb x86_64 0:1.17.0-7.fc44 fedora 1.1 MiB libxcb-devel x86_64 0:1.17.0-7.fc44 fedora 2.6 MiB libxcrypt-devel x86_64 0:4.5.2-3.fc44 fedora 31.0 KiB libxkbcommon x86_64 0:1.13.1-2.fc44 fedora 432.2 KiB libxkbcommon-x11 x86_64 0:1.13.1-2.fc44 fedora 35.4 KiB libxshmfence x86_64 0:1.3.2-8.fc44 fedora 12.3 KiB libzstd-devel x86_64 0:1.5.7-5.fc44 fedora 217.6 KiB llvm-filesystem x86_64 0:22.1.4-1.fc44 updates 0.0 B llvm-libs x86_64 0:22.1.4-1.fc44 updates 140.5 MiB lm_sensors-libs x86_64 0:3.6.0-24.fc44 fedora 85.7 KiB make x86_64 1:4.4.1-12.fc44 fedora 1.8 MiB mesa-dri-drivers x86_64 0:26.0.5-3.fc44 updates 51.2 MiB mesa-filesystem x86_64 0:26.0.5-3.fc44 updates 3.6 KiB mesa-libEGL x86_64 0:26.0.5-3.fc44 updates 394.4 KiB mesa-libGL x86_64 0:26.0.5-3.fc44 updates 370.0 KiB mesa-libGLU x86_64 0:9.0.3-8.fc44 fedora 369.8 KiB mesa-libgbm x86_64 0:26.0.5-3.fc44 updates 19.5 KiB mpdecimal x86_64 0:4.0.1-3.fc44 fedora 217.1 KiB mtdev x86_64 0:1.1.6-12.fc44 fedora 29.1 KiB ncurses x86_64 0:6.6-1.fc44 fedora 611.4 KiB ninja-build x86_64 0:1.13.2-2.fc44 fedora 496.5 KiB openssh x86_64 0:10.2p1-10.fc44 updates 1.4 MiB openssh-clients x86_64 0:10.2p1-10.fc44 updates 2.7 MiB pcre2-utf16 x86_64 0:10.47-1.fc44.1 fedora 655.2 KiB perl-AutoLoader noarch 0:5.74-524.fc44 updates 20.6 KiB perl-B x86_64 0:1.89-524.fc44 updates 501.2 KiB perl-Carp noarch 0:1.54-521.fc44 fedora 46.6 KiB perl-Class-Struct noarch 0:0.68-524.fc44 updates 25.4 KiB perl-Data-Dumper x86_64 0:2.191-522.fc44 fedora 115.5 KiB perl-Digest noarch 0:1.20-521.fc44 fedora 35.3 KiB perl-Digest-MD5 x86_64 0:2.59-521.fc44 fedora 59.6 KiB perl-DynaLoader x86_64 0:1.57-524.fc44 updates 32.1 KiB perl-Encode x86_64 4:3.21-521.fc44 fedora 4.7 MiB perl-English noarch 0:1.11-524.fc44 updates 6.2 KiB perl-Errno x86_64 0:1.38-524.fc44 updates 8.4 KiB perl-Error noarch 1:0.17030-3.fc44 fedora 76.8 KiB perl-Exporter noarch 0:5.79-521.fc44 fedora 54.3 KiB perl-Fcntl x86_64 0:1.20-524.fc44 updates 48.7 KiB perl-File-Basename noarch 0:2.86-524.fc44 updates 14.0 KiB perl-File-Find noarch 0:1.44-524.fc44 updates 42.0 KiB perl-File-Path noarch 0:2.18-522.fc44 fedora 63.5 KiB perl-File-Temp noarch 1:0.231.200-2.fc44 fedora 163.7 KiB perl-File-stat noarch 0:1.14-524.fc44 updates 12.5 KiB perl-FileHandle noarch 0:2.05-524.fc44 updates 9.4 KiB perl-Getopt-Long noarch 1:2.58-521.fc44 fedora 144.5 KiB perl-Getopt-Std noarch 0:1.14-524.fc44 updates 11.2 KiB perl-Git noarch 0:2.54.0-1.fc44 updates 64.4 KiB perl-HTTP-Tiny noarch 0:0.092-2.fc44 fedora 157.6 KiB perl-IO x86_64 0:1.55-524.fc44 updates 147.3 KiB perl-IO-Socket-IP noarch 0:0.43-522.fc44 fedora 100.3 KiB perl-IO-Socket-SSL noarch 0:2.098-2.fc44 fedora 723.5 KiB perl-IPC-Open3 noarch 0:1.24-524.fc44 updates 27.7 KiB perl-MIME-Base32 noarch 0:1.303-25.fc44 fedora 30.7 KiB perl-MIME-Base64 x86_64 0:3.16-521.fc44 fedora 41.9 KiB perl-Net-SSLeay x86_64 0:1.94-12.fc44 fedora 1.3 MiB perl-POSIX x86_64 0:2.23-524.fc44 updates 229.4 KiB perl-PathTools x86_64 0:3.94-521.fc44 fedora 179.9 KiB perl-Pod-Escapes noarch 1:1.07-521.fc44 fedora 24.9 KiB perl-Pod-Perldoc noarch 0:3.28.01-522.fc44 fedora 163.7 KiB perl-Pod-Simple noarch 1:3.47-4.fc44 fedora 565.3 KiB perl-Pod-Usage noarch 4:2.05-521.fc44 fedora 86.3 KiB perl-Scalar-List-Utils x86_64 5:1.70-2.fc44 fedora 144.8 KiB perl-SelectSaver noarch 0:1.02-524.fc44 updates 2.2 KiB perl-Socket x86_64 4:2.040-3.fc44 fedora 120.1 KiB perl-Storable x86_64 1:3.37-522.fc44 fedora 235.1 KiB perl-Symbol noarch 0:1.09-524.fc44 updates 6.8 KiB perl-Term-ANSIColor noarch 0:5.01-522.fc44 fedora 97.5 KiB perl-Term-Cap noarch 0:1.18-521.fc44 fedora 29.3 KiB perl-TermReadKey x86_64 0:2.38-27.fc44 fedora 63.9 KiB perl-Text-ParseWords noarch 0:3.31-521.fc44 fedora 13.6 KiB perl-Text-Tabs+Wrap noarch 0:2024.001-521.fc44 fedora 22.6 KiB perl-Time-HiRes x86_64 4:1.9778-521.fc44 fedora 115.6 KiB perl-Time-Local noarch 2:1.350-521.fc44 fedora 69.0 KiB perl-URI noarch 0:5.34-3.fc44 fedora 268.0 KiB perl-base noarch 0:2.27-524.fc44 updates 12.6 KiB perl-constant noarch 0:1.33-522.fc44 fedora 26.2 KiB perl-if noarch 0:0.61.000-524.fc44 updates 5.8 KiB perl-interpreter x86_64 4:5.42.2-524.fc44 updates 118.7 KiB perl-lib x86_64 0:0.65-524.fc44 updates 8.5 KiB perl-libnet noarch 0:3.15-522.fc44 fedora 289.4 KiB perl-libs x86_64 4:5.42.2-524.fc44 updates 11.6 MiB perl-locale noarch 0:1.13-524.fc44 updates 6.1 KiB perl-mro x86_64 0:1.29-524.fc44 updates 41.4 KiB perl-overload noarch 0:1.40-524.fc44 updates 71.6 KiB perl-overloading noarch 0:0.02-524.fc44 updates 4.9 KiB perl-parent noarch 1:0.244-521.fc44 fedora 10.3 KiB perl-podlators noarch 1:6.0.2-521.fc44 fedora 317.5 KiB perl-vars noarch 0:1.05-524.fc44 updates 3.9 KiB pyproject-rpm-macros noarch 0:1.21.0-1.fc44 updates 133.8 KiB python-pip-wheel noarch 0:26.0.1-2.fc44 fedora 1.2 MiB python-rpm-macros noarch 0:3.14-12.fc44 fedora 28.0 KiB python3-libs x86_64 0:3.14.4-2.fc44 updates 43.8 MiB python3-packaging noarch 0:25.0-8.fc44 fedora 607.4 KiB python3-rpm-generators noarch 0:14-14.fc44 fedora 81.7 KiB python3-rpm-macros noarch 0:3.14-12.fc44 fedora 6.5 KiB qt-settings noarch 0:43.101-3.fc44 fedora 1.1 KiB qt5-filesystem x86_64 0:5.15.18-2.fc44 fedora 0.0 B qt5-qtbase x86_64 0:5.15.18-2.fc44 fedora 9.9 MiB qt5-qtbase-common noarch 0:5.15.18-2.fc44 fedora 78.0 B qt5-qtbase-gui x86_64 0:5.15.18-2.fc44 fedora 20.4 MiB qt5-qtsvg x86_64 0:5.15.18-2.fc44 fedora 627.0 KiB qt5-rpm-macros noarch 0:5.15.18-2.fc44 fedora 1.6 KiB rhash x86_64 0:1.4.5-4.fc44 fedora 354.8 KiB spirv-tools-libs x86_64 0:2026.1-1.fc44 fedora 6.1 MiB tzdata noarch 0:2026a-1.fc44 fedora 1.2 MiB vim-filesystem noarch 2:9.2.390-1.fc44 updates 40.0 B vulkan-headers noarch 0:1.4.341.0-1.fc44 fedora 36.1 MiB vulkan-loader x86_64 0:1.4.341.0-1.fc44 fedora 577.6 KiB vulkan-loader-devel x86_64 0:1.4.341.0-1.fc44 fedora 8.0 KiB xcb-util x86_64 0:0.4.1-9.fc44 fedora 26.1 KiB xcb-util-image x86_64 0:0.4.1-9.fc44 fedora 22.0 KiB xcb-util-keysyms x86_64 0:0.4.1-9.fc44 fedora 16.6 KiB xcb-util-renderutil x86_64 0:0.3.10-9.fc44 fedora 24.2 KiB xcb-util-wm x86_64 0:0.4.2-9.fc44 fedora 81.0 KiB xkeyboard-config noarch 0:2.47-1.fc44 fedora 6.4 MiB xml-common noarch 0:0.6.3-68.fc44 fedora 78.4 KiB xorg-x11-proto-devel noarch 0:2025.1-2.fc44 fedora 1.8 MiB Transaction Summary: Installing: 215 packages Total size of inbound packages is 235 MiB. Need to download 235 MiB. After this operation, 843 MiB extra will be used (install 843 MiB, remove 0 B). [ 1/215] fftw-devel-0:3.3.10-17.fc44.x 100% | 7.7 MiB/s | 134.1 KiB | 00m00s [ 2/215] git-0:2.54.0-1.fc44.x86_64 100% | 2.2 MiB/s | 41.3 KiB | 00m00s [ 3/215] libpng-devel-2:1.6.56-1.fc44. 100% | 98.6 MiB/s | 302.8 KiB | 00m00s [ 4/215] libtiff-devel-0:4.7.1-2.fc44. 100% | 90.1 MiB/s | 276.9 KiB | 00m00s [ 5/215] mesa-libGL-devel-0:26.0.5-3.f 100% | 12.8 MiB/s | 26.2 KiB | 00m00s [ 6/215] python3-0:3.14.4-2.fc44.x86_6 100% | 27.8 MiB/s | 28.5 KiB | 00m00s [ 7/215] mesa-libGLU-devel-0:9.0.3-8.f 100% | 5.8 MiB/s | 11.9 KiB | 00m00s [ 8/215] python3-devel-0:3.14.4-2.fc44 100% | 142.5 MiB/s | 437.8 KiB | 00m00s [ 9/215] qt5-qtsvg-devel-0:5.15.18-2.f 100% | 7.6 MiB/s | 31.1 KiB | 00m00s [ 10/215] zlib-ng-compat-devel-0:2.3.3- 100% | 18.6 MiB/s | 38.1 KiB | 00m00s [ 11/215] fftw-0:3.3.10-17.fc44.x86_64 100% | 22.2 MiB/s | 45.5 KiB | 00m00s [ 12/215] fftw-libs-0:3.3.10-17.fc44.x8 100% | 3.9 MiB/s | 7.9 KiB | 00m00s [ 13/215] qt5-qtbase-devel-0:5.15.18-2. 100% | 95.7 MiB/s | 3.5 MiB | 00m00s [ 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libedit-0:3.1-58.20251016cvs. 100% | 35.7 MiB/s | 109.7 KiB | 00m00s [193/215] libpciaccess-devel-0:0.16-17. 100% | 4.1 MiB/s | 12.5 KiB | 00m00s [194/215] less-0:692-5.fc44.x86_64 100% | 107.9 MiB/s | 221.0 KiB | 00m00s [195/215] kernel-headers-0:6.19.6-300.f 100% | 192.3 MiB/s | 1.7 MiB | 00m00s [196/215] openssh-clients-0:10.2p1-10.f 100% | 152.0 MiB/s | 778.4 KiB | 00m00s [197/215] openssh-0:10.2p1-10.fc44.x86_ 100% | 86.8 MiB/s | 355.6 KiB | 00m00s [198/215] perl-lib-0:0.65-524.fc44.x86_ 100% | 14.4 MiB/s | 14.7 KiB | 00m00s [199/215] libmpc-0:1.4.1-1.fc44.x86_64 100% | 73.7 MiB/s | 75.5 KiB | 00m00s [200/215] glibc-devel-0:2.43-4.fc44.x86 100% | 120.0 MiB/s | 614.3 KiB | 00m00s [201/215] libxcrypt-devel-0:4.5.2-3.fc4 100% | 29.3 MiB/s | 30.0 KiB | 00m00s [202/215] libatomic-0:16.1.1-1.fc44.x86 100% | 48.2 MiB/s | 49.4 KiB | 00m00s [203/215] libXau-devel-0:1.0.12-4.fc44. 100% | 6.8 MiB/s | 14.0 KiB | 00m00s [204/215] gcc-plugin-annobin-0:16.1.1-1 100% | 51.7 MiB/s | 52.9 KiB | 00m00s [205/215] cmake-rpm-macros-0:4.3.0-1.fc 100% | 6.7 MiB/s | 13.8 KiB | 00m00s [206/215] pyproject-rpm-macros-0:1.21.0 100% | 48.3 MiB/s | 49.5 KiB | 00m00s [207/215] python-rpm-macros-0:3.14-12.f 100% | 19.5 MiB/s | 20.0 KiB | 00m00s [208/215] python3-rpm-generators-0:14-1 100% | 14.0 MiB/s | 28.6 KiB | 00m00s [209/215] python3-rpm-macros-0:3.14-12. 100% | 6.1 MiB/s | 12.4 KiB | 00m00s [210/215] ninja-build-0:1.13.2-2.fc44.x 100% | 49.8 MiB/s | 203.9 KiB | 00m00s [211/215] python3-packaging-0:25.0-8.fc 100% | 52.5 MiB/s | 161.2 KiB | 00m00s [212/215] annobin-plugin-gcc-0:13.14-1. 100% | 167.1 MiB/s | 684.4 KiB | 00m00s [213/215] annobin-docs-0:13.14-1.fc44.n 100% | 42.3 MiB/s | 86.7 KiB | 00m00s [214/215] libstdc++-devel-0:16.1.1-1.fc 100% | 126.9 MiB/s | 6.0 MiB | 00m00s [215/215] llvm-libs-0:22.1.4-1.fc44.x86 100% | 293.9 MiB/s | 34.1 MiB | 00m00s -------------------------------------------------------------------------------- [215/215] Total 100% | 348.8 MiB/s | 234.7 MiB | 00m01s Running transaction [ 1/217] Verify package files 100% | 249.0 B/s | 215.0 B | 00m01s [ 2/217] Prepare transaction 100% | 1.0 KiB/s | 215.0 B | 00m00s [ 3/217] Installing cmake-filesystem-0 100% | 4.6 MiB/s | 9.4 KiB | 00m00s [ 4/217] Installing expat-0:2.7.3-2.fc 100% | 20.8 MiB/s | 318.9 KiB | 00m00s [ 5/217] Installing glib2-0:2.88.0-1.f 100% | 259.1 MiB/s | 15.3 MiB | 00m00s [ 6/217] Installing libX11-xcb-0:1.8.1 100% | 0.0 B/s | 11.6 KiB | 00m00s [ 7/217] Installing libglvnd-1:1.7.0-9 100% | 257.7 MiB/s | 527.8 KiB | 00m00s [ 8/217] Installing python-rpm-macros- 100% | 0.0 B/s | 28.9 KiB | 00m00s [ 9/217] Installing libmpc-0:1.4.1-1.f 100% | 166.4 MiB/s | 170.4 KiB | 00m00s [ 10/217] Installing fonts-filesystem-1 100% | 0.0 B/s | 788.0 B | 00m00s [ 11/217] Installing libjpeg-turbo-0:3. 100% | 266.9 MiB/s | 819.9 KiB | 00m00s [ 12/217] Installing libpng-2:1.6.56-1. 100% | 245.0 MiB/s | 250.9 KiB | 00m00s [ 13/217] Installing python3-rpm-macros 100% | 0.0 B/s | 6.8 KiB | 00m00s [ 14/217] Installing libglvnd-opengl-1: 100% | 142.1 MiB/s | 145.5 KiB | 00m00s [ 15/217] Installing zlib-ng-compat-dev 100% | 35.3 MiB/s | 108.6 KiB | 00m00s [ 16/217] Installing kernel-headers-0:6 100% | 152.8 MiB/s | 7.0 MiB | 00m00s [ 17/217] Installing glibc-devel-0:2.43 100% | 125.5 MiB/s | 2.4 MiB | 00m00s [ 18/217] Installing libxcrypt-devel-0: 100% | 32.5 MiB/s | 33.3 KiB | 00m00s [ 19/217] Installing libedit-0:3.1-58.2 100% | 122.0 MiB/s | 249.8 KiB | 00m00s [ 20/217] Installing vim-filesystem-2:9 100% | 4.7 MiB/s | 4.8 KiB | 00m00s [ 21/217] Installing libevdev-0:1.13.6- 100% | 88.8 MiB/s | 91.0 KiB | 00m00s [ 22/217] Installing libXau-0:1.0.12-4. 100% | 72.6 MiB/s | 74.3 KiB | 00m00s [ 23/217] Installing libxcb-0:1.17.0-7. 100% | 153.9 MiB/s | 1.1 MiB | 00m00s [ 24/217] Installing xorg-x11-proto-dev 100% | 199.5 MiB/s | 1.8 MiB | 00m00s [ 25/217] Installing libICE-0:1.1.2-4.f 100% | 195.0 MiB/s | 199.7 KiB | 00m00s [ 26/217] Installing dbus-libs-1:1.16.2 100% | 175.1 MiB/s | 358.5 KiB | 00m00s [ 27/217] Installing libwebp-0:1.6.0-3. 100% | 237.3 MiB/s | 972.1 KiB | 00m00s [ 28/217] Installing liblerc-0:4.0.0-10 100% | 317.1 MiB/s | 649.4 KiB | 00m00s [ 29/217] Installing make-1:4.4.1-12.fc 100% | 94.7 MiB/s | 1.8 MiB | 00m00s [ 30/217] Installing fftw-libs-single-0 100% | 328.6 MiB/s | 3.6 MiB | 00m00s [ 31/217] Installing fftw-libs-long-0:3 100% | 309.6 MiB/s | 1.5 MiB | 00m00s [ 32/217] Installing fftw-libs-double-0 100% | 342.4 MiB/s | 3.4 MiB | 00m00s [ 33/217] Installing liblerc-devel-0:4. 100% | 428.7 MiB/s | 4.3 MiB | 00m00s [ 34/217] Installing libwebp-devel-0:1. 100% | 122.4 MiB/s | 125.4 KiB | 00m00s [ 35/217] Installing avahi-libs-0:0.9~r 100% | 88.8 MiB/s | 181.8 KiB | 00m00s [ 36/217] Installing libSM-0:1.2.5-4.fc 100% | 99.9 MiB/s | 102.2 KiB | 00m00s [ 37/217] Installing libXau-devel-0:1.0 100% | 1.5 MiB/s | 9.1 KiB | 00m00s [ 38/217] Installing libxcb-devel-0:1.1 100% | 56.9 MiB/s | 3.0 MiB | 00m00s [ 39/217] Installing xcb-util-keysyms-0 100% | 17.3 MiB/s | 17.7 KiB | 00m00s [ 40/217] Installing xcb-util-renderuti 100% | 25.1 MiB/s | 25.7 KiB | 00m00s [ 41/217] Installing xcb-util-wm-0:0.4. 100% | 81.0 MiB/s | 83.0 KiB | 00m00s [ 42/217] Installing xcb-util-0:0.4.1-9 100% | 26.9 MiB/s | 27.5 KiB | 00m00s [ 43/217] Installing xcb-util-image-0:0 100% | 22.9 MiB/s | 23.5 KiB | 00m00s [ 44/217] Installing mesa-libGLU-0:9.0. 100% | 180.9 MiB/s | 370.6 KiB | 00m00s [ 45/217] Installing pyproject-rpm-macr 100% | 132.9 MiB/s | 136.1 KiB | 00m00s [ 46/217] Installing libjpeg-turbo-deve 100% | 348.1 MiB/s | 356.5 KiB | 00m00s [ 47/217] Installing abattis-cantarell- 100% | 189.9 MiB/s | 194.4 KiB | 00m00s [ 48/217] Installing cpp-0:16.1.1-1.fc4 100% | 309.3 MiB/s | 42.1 MiB | 00m00s [ 49/217] Installing libgudev-0:238-9.f 100% | 91.0 MiB/s | 93.2 KiB | 00m00s [ 50/217] Installing libzstd-devel-0:1. 100% | 214.0 MiB/s | 219.1 KiB | 00m00s [ 51/217] Installing annobin-docs-0:13. 100% | 98.1 MiB/s | 100.5 KiB | 00m00s [ 52/217] Installing libatomic-0:16.1.1 100% | 22.8 MiB/s | 46.7 KiB | 00m00s [ 53/217] Installing gcc-0:16.1.1-1.fc4 100% | 347.3 MiB/s | 120.9 MiB | 00m00s [ 54/217] Installing libstdc++-devel-0: 100% | 375.6 MiB/s | 41.3 MiB | 00m00s [ 55/217] Installing gcc-c++-0:16.1.1-1 100% | 286.0 MiB/s | 46.3 MiB | 00m00s [ 56/217] Installing openssh-0:10.2p1-1 100% | 84.3 MiB/s | 1.4 MiB | 00m00s [ 57/217] Installing openssh-clients-0: 100% | 103.5 MiB/s | 2.7 MiB | 00m00s [ 58/217] Installing less-0:692-5.fc44. 100% | 28.7 MiB/s | 470.4 KiB | 00m00s [ 59/217] Installing git-core-0:2.54.0- 100% | 310.6 MiB/s | 25.2 MiB | 00m00s [ 60/217] Installing git-core-doc-0:2.5 100% | 282.0 MiB/s | 18.9 MiB | 00m00s [ 61/217] Installing llvm-filesystem-0: 100% | 0.0 B/s | 1.1 KiB | 00m00s [ 62/217] Installing llvm-libs-0:22.1.4 100% | 389.1 MiB/s | 140.5 MiB | 00m00s [ 63/217] Installing libquadmath-0:16.1 100% | 159.8 MiB/s | 327.2 KiB | 00m00s [ 64/217] Installing fftw-libs-quad-0:3 100% | 313.1 MiB/s | 2.5 MiB | 00m00s [ 65/217] Installing fftw-0:3.3.10-17.f 100% | 12.9 MiB/s | 184.2 KiB | 00m00s [ 66/217] Installing fftw-libs-0:3.3.10 100% | 0.0 B/s | 124.0 B | 00m00s [ 67/217] Installing hwdata-0:0.406-1.f 100% | 470.0 MiB/s | 9.9 MiB | 00m00s [ 68/217] Installing libpciaccess-0:0.1 100% | 48.6 MiB/s | 49.8 KiB | 00m00s [ 69/217] Installing libdrm-0:2.4.133-1 100% | 200.0 MiB/s | 409.7 KiB | 00m00s [ 70/217] Installing libpciaccess-devel 100% | 0.0 B/s | 15.9 KiB | 00m00s [ 71/217] Installing libdrm-devel-0:2.4 100% | 183.5 MiB/s | 751.8 KiB | 00m00s [ 72/217] Installing vulkan-loader-0:1. 100% | 283.3 MiB/s | 580.2 KiB | 00m00s [ 73/217] Installing spirv-tools-libs-0 100% | 358.6 MiB/s | 6.1 MiB | 00m00s [ 74/217] Installing lm_sensors-libs-0: 100% | 84.8 MiB/s | 86.8 KiB | 00m00s [ 75/217] Installing libxshmfence-0:1.3 100% | 0.0 B/s | 13.4 KiB | 00m00s [ 76/217] Installing mesa-filesystem-0: 100% | 0.0 B/s | 4.3 KiB | 00m00s [ 77/217] Installing mesa-dri-drivers-0 100% | 387.7 MiB/s | 51.2 MiB | 00m00s [ 78/217] Installing mesa-libgbm-0:26.0 100% | 19.9 MiB/s | 20.4 KiB | 00m00s [ 79/217] Installing libwayland-client- 100% | 20.5 MiB/s | 63.1 KiB | 00m00s [ 80/217] Installing libwacom-data-0:2. 100% | 69.8 MiB/s | 1.5 MiB | 00m00s [ 81/217] Installing mtdev-0:1.1.6-12.f 100% | 29.6 MiB/s | 30.3 KiB | 00m00s [ 82/217] Installing graphite2-0:1.3.14 100% | 13.5 MiB/s | 193.6 KiB | 00m00s [ 83/217] Installing freetype-0:2.14.3- 100% | 224.6 MiB/s | 920.0 KiB | 00m00s [ 84/217] Installing harfbuzz-0:14.1.0- 100% | 312.5 MiB/s | 2.8 MiB | 00m00s [ 85/217] Installing cups-filesystem-1: 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [ 86/217] Installing cups-libs-1:2.4.18 100% | 207.1 MiB/s | 636.2 KiB | 00m00s [ 87/217] Installing emacs-filesystem-1 100% | 0.0 B/s | 812.0 B | 00m00s [ 88/217] Installing rhash-0:1.4.5-4.fc 100% | 23.4 MiB/s | 360.1 KiB | 00m00s [ 89/217] Installing libuv-1:1.51.0-3.f 100% | 190.6 MiB/s | 585.6 KiB | 00m00s [ 90/217] Installing jsoncpp-0:1.9.6-3. 100% | 140.2 MiB/s | 287.1 KiB | 00m00s [ 91/217] Installing google-noto-fonts- 100% | 0.0 B/s | 18.5 KiB | 00m00s [ 92/217] Installing google-noto-sans-v 100% | 278.3 MiB/s | 1.4 MiB | 00m00s [ 93/217] Installing default-fonts-core 100% | 8.9 MiB/s | 18.2 KiB | 00m00s [ 94/217] Installing ncurses-0:6.6-1.fc 100% | 27.4 MiB/s | 618.0 KiB | 00m00s [ 95/217] Installing groff-base-0:1.23. 100% | 102.5 MiB/s | 3.9 MiB | 00m00s [ 96/217] Installing perl-Digest-0:1.20 100% | 36.2 MiB/s | 37.1 KiB | 00m00s [ 97/217] Installing perl-FileHandle-0: 100% | 0.0 B/s | 9.8 KiB | 00m00s [ 98/217] Installing perl-B-0:1.89-524. 100% | 164.2 MiB/s | 504.5 KiB | 00m00s [ 99/217] Installing perl-Digest-MD5-0: 100% | 60.0 MiB/s | 61.5 KiB | 00m00s [100/217] Installing perl-libnet-0:3.15 100% | 143.9 MiB/s | 294.7 KiB | 00m00s [101/217] Installing perl-Data-Dumper-0 100% | 114.7 MiB/s | 117.4 KiB | 00m00s [102/217] Installing perl-MIME-Base32-0 100% | 31.4 MiB/s | 32.2 KiB | 00m00s [103/217] Installing perl-URI-0:5.34-3. 100% | 68.8 MiB/s | 281.8 KiB | 00m00s [104/217] Installing perl-IO-Socket-IP- 100% | 99.8 MiB/s | 102.2 KiB | 00m00s [105/217] Installing perl-AutoLoader-0: 100% | 0.0 B/s | 21.0 KiB | 00m00s [106/217] Installing perl-IO-Socket-SSL 100% | 236.9 MiB/s | 727.6 KiB | 00m00s [107/217] Installing perl-locale-0:1.13 100% | 6.4 MiB/s | 6.5 KiB | 00m00s [108/217] Installing perl-Net-SSLeay-0: 100% | 192.4 MiB/s | 1.3 MiB | 00m00s [109/217] Installing perl-if-0:0.61.000 100% | 0.0 B/s | 6.2 KiB | 00m00s [110/217] Installing perl-Pod-Escapes-1 100% | 25.3 MiB/s | 25.9 KiB | 00m00s [111/217] Installing perl-File-Path-0:2 100% | 63.0 MiB/s | 64.5 KiB | 00m00s [112/217] Installing perl-Text-Tabs+Wra 100% | 23.3 MiB/s | 23.9 KiB | 00m00s [113/217] Installing perl-Time-Local-2: 100% | 68.9 MiB/s | 70.6 KiB | 00m00s [114/217] Installing perl-Time-HiRes-4: 100% | 114.9 MiB/s | 117.7 KiB | 00m00s [115/217] Installing perl-Class-Struct- 100% | 25.3 MiB/s | 25.9 KiB | 00m00s [116/217] Installing perl-IPC-Open3-0:1 100% | 0.0 B/s | 28.5 KiB | 00m00s [117/217] Installing perl-HTTP-Tiny-0:0 100% | 155.9 MiB/s | 159.7 KiB | 00m00s [118/217] Installing perl-File-Temp-1:0 100% | 161.6 MiB/s | 165.5 KiB | 00m00s [119/217] Installing perl-POSIX-0:2.23- 100% | 225.2 MiB/s | 230.6 KiB | 00m00s [120/217] Installing perl-Pod-Simple-1: 100% | 187.1 MiB/s | 574.9 KiB | 00m00s [121/217] Installing perl-Term-Cap-0:1. 100% | 29.9 MiB/s | 30.6 KiB | 00m00s [122/217] Installing perl-Term-ANSIColo 100% | 96.9 MiB/s | 99.2 KiB | 00m00s [123/217] Installing perl-File-stat-0:1 100% | 0.0 B/s | 13.1 KiB | 00m00s [124/217] Installing perl-Pod-Perldoc-0 100% | 11.8 MiB/s | 169.2 KiB | 00m00s [125/217] Installing perl-podlators-1:6 100% | 22.4 MiB/s | 321.4 KiB | 00m00s [126/217] Installing perl-SelectSaver-0 100% | 2.6 MiB/s | 2.6 KiB | 00m00s [127/217] Installing perl-Symbol-0:1.09 100% | 7.1 MiB/s | 7.3 KiB | 00m00s [128/217] Installing perl-Socket-4:2.04 100% | 59.7 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Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1777939200 Wrote: /builddir/build/SRPMS/mrtrix3-3.0.8-3.fc44.src.rpm Updating and loading repositories: updates 100% | 224.1 KiB/s | 46.6 KiB | 00m00s fedora 100% | 242.9 KiB/s | 45.2 KiB | 00m00s Copr repository 100% | 9.2 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package "fftw-devel-3.3.10-17.fc44.x86_64" is already installed. Nothing to do. Package "gcc-c++-16.1.1-1.fc44.x86_64" is already installed. Package "git-2.54.0-1.fc44.x86_64" is already installed. Package "libpng-devel-2:1.6.56-1.fc44.x86_64" is already installed. Package "libtiff-devel-4.7.1-2.fc44.x86_64" is already installed. Package "mesa-libGL-devel-26.0.5-3.fc44.x86_64" is already installed. Package "mesa-libGLU-devel-9.0.3-8.fc44.x86_64" is already installed. Package "python3-3.14.4-2.fc44.x86_64" is already installed. Package "python3-devel-3.14.4-2.fc44.x86_64" is already installed. Package "qt5-qtbase-devel-5.15.18-2.fc44.x86_64" is already installed. Package "qt5-qtsvg-devel-5.15.18-2.fc44.x86_64" is already installed. Package "zlib-ng-compat-devel-2.3.3-3.fc44.x86_64" is already installed. Finish: build setup for mrtrix3-3.0.8-3.fc44.src.rpm Start: rpmbuild mrtrix3-3.0.8-3.fc44.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1777939200 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.LMYxJL Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.50G5fp + umask 022 + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + rm -rf mrtrix3-3.0.8 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/mrtrix3-3.0.8.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd mrtrix3-3.0.8 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + tar -xf /builddir/build/SOURCES/eigen-3.4.0.tar.gz + mv eigen-3.4.0 .eigen-3.4.0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.eeeAiE + umask 022 + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd mrtrix3-3.0.8 + sed -i 's|#!/usr/bin/env python|#!/usr/bin/python3|' configure build ++ echo '-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer' ++ sed s/-flto=auto// + export 'CXXFLAGS=-O2 -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -g' + CXXFLAGS='-O2 -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -std=c++17 -include cstdint -g' + export 'LDFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export 'LINKFLAGS=-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + LINKFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export ARCH=native + ARCH=native + export 'EIGEN_CFLAGS=-isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0' + EIGEN_CFLAGS='-isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0' + export QMAKE=/usr/bin/qmake-qt5 + QMAKE=/usr/bin/qmake-qt5 + export MOC=/usr/bin/moc-qt5 + MOC=/usr/bin/moc-qt5 + export RCC=/usr/bin/rcc-qt5 + RCC=/usr/bin/rcc-qt5 + ./configure -debug MRtrix build type requested: debug version with nooptim Detecting OS: linux Machine architecture set by ARCH environment variable to: native Looking for compiler [g++]: g++ (GCC) 16.1.1 20260501 (Red Hat 16.1.1-1) Checking for C++11 compliance: ok Checking shared library generation: ok Detecting pointer size: 64 bit Detecting byte order: little-endian Checking for variable-length array support: ok Checking for non-POD variable-length array support: ok Checking for ::max_align_t: 16 bytes Checking for std::max_align_t: 16 bytes Checking for Eigen3 library: 3.4.0 Checking for Eigen3 Unsupported: Present Checking for zlib compression library: 1.3.1.zlib-ng Checking for "JSON for Modern C++" requirements: ok Checking for TIFF library: LIBTIFF, Version 4.7.1 Checking for PNG library: Header: 1.6.56; library: 1.6.56 Checking for FFTW library: fftw-3.3.10-sse2-avx-avx2-avx2_128 Checking for Qt moc: /usr/bin/moc-qt5 (version 5.15.18) Checking for Qt qmake: /usr/bin/qmake-qt5 (version 5.15.18) Checking for Qt rcc: /usr/bin/rcc-qt5 (version 5.15.18) Checking for Qt: 5.15.18 writing configuration to file './config': ok + ./build /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/./build:540: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (config_file, mode='r', encoding='utf-8') as f: /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/./build:1023: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (current_file, mode='r', encoding='utf-8') as fd: /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/./build:857: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (modify_path (self.name, strip=cpp_suffix, add=h_suffix), mode='r', encoding='utf-8') as fd: ( 1/548) [CC] tmp/core/algo/histogram.o ( 2/548) [CC] tmp/core/stride.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/stride.cpp -o tmp/core/stride.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from core/app.h:20, from core/stride.h:20, from core/stride.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 3/548) [CC] tmp/core/file/png.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/algo/histogram.cpp -o tmp/core/algo/histogram.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from ./core/algo/histogram.h:20, from core/algo/histogram.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 4/548) [CC] tmp/core/datatype.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/datatype.cpp -o tmp/core/datatype.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from core/app.h:20, from core/datatype.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 5/548) [CC] tmp/core/math/stats/fwe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/png.cpp -o tmp/core/file/png.o: In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/limits.h:26, from /usr/lib/gcc/x86_64-redhat-linux/16/include/limits.h:210, from /usr/lib/gcc/x86_64-redhat-linux/16/include/syslimits.h:9, from /usr/lib/gcc/x86_64-redhat-linux/16/include/limits.h:34, from /usr/include/libpng16/pngconf.h:30, from /usr/include/libpng16/png.h:333, from ./core/file/png.h:22, from core/file/png.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 6/548) [CC] tmp/core/math/SH.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/stats/fwe.cpp -o tmp/core/math/stats/fwe.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from ./core/math/stats/typedefs.h:20, from ./core/math/stats/fwe.h:21, from core/math/stats/fwe.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 7/548) [CC] tmp/core/image_io/null.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/SH.cpp -o tmp/core/math/SH.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from ./core/math/math.h:20, from ./core/math/legendre.h:20, from ./core/math/SH.h:20, from core/math/SH.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 8/548) [CC] tmp/core/formats/par.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/null.cpp -o tmp/core/image_io/null.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cassert:45, from ./core/image_io/base.h:20, from ./core/image_io/null.h:20, from core/image_io/null.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 9/548) [CC] tmp/core/formats/list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/list.cpp -o tmp/core/formats/list.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdlib:46, from core/formats/list.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 10/548) [CC] tmp/core/file/dicom/dict.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/dict.cpp -o tmp/core/file/dicom/dict.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/unordered_map:36, from ./core/file/dicom/element.h:20, from core/file/dicom/dict.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 11/548) [CC] tmp/core/math/bessel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/par.cpp -o tmp/core/formats/par.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/numeric:62, from core/formats/par.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 12/548) [CC] tmp/core/formats/pipe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/bessel.cpp -o tmp/core/math/bessel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from ./core/math/bessel.h:20, from core/math/bessel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 13/548) [CC] tmp/core/file/dicom/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/pipe.cpp -o tmp/core/formats/pipe.o: In file included from /usr/include/unistd.h:25, from core/formats/pipe.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 14/548) [CC] tmp/core/math/stats/import.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/mapper.cpp -o tmp/core/file/dicom/mapper.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/stl_algobase.h:59, from /usr/include/c++/16/algorithm:62, from core/file/dicom/mapper.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 15/548) [CC] tmp/core/header.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/stats/import.cpp -o tmp/core/math/stats/import.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from ./core/math/stats/import.h:19, from core/math/stats/import.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 16/548) [CC] tmp/core/file/ofstream.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/ofstream.cpp -o tmp/core/file/ofstream.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from ./core/file/ofstream.h:21, from core/file/ofstream.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 17/548) [CC] tmp/core/metadata/bids.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/metadata/bids.cpp -o tmp/core/metadata/bids.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from ./core/metadata/bids.h:20, from core/metadata/bids.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 18/548) [CC] tmp/core/image_io/fetch_store.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/fetch_store.cpp -o tmp/core/image_io/fetch_store.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/atomic:51, from ./core/raw.h:23, from ./core/image_io/fetch_store.h:20, from core/image_io/fetch_store.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 19/548) [CC] tmp/core/image_io/variable_scaling.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/variable_scaling.cpp -o tmp/core/image_io/variable_scaling.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from core/image_io/variable_scaling.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 20/548) [CC] tmp/core/formats/nifti1_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/nifti1_gz.cpp -o tmp/core/formats/nifti1_gz.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from ./core/file/nifti_utils.h:20, from core/formats/nifti1_gz.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 21/548) [CC] tmp/core/formats/mgz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/header.cpp -o tmp/core/header.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from core/header.h:20, from core/header.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 22/548) [CC] tmp/core/formats/nifti1.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/nifti1.cpp -o tmp/core/formats/nifti1.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from ./core/file/nifti_utils.h:20, from core/formats/nifti1.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 23/548) [CC] tmp/core/file/dicom/quick_scan.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mgz.cpp -o tmp/core/formats/mgz.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from ./core/file/utils.h:20, from core/formats/mgz.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 24/548) [CC] tmp/core/image_io/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/quick_scan.cpp -o tmp/core/file/dicom/quick_scan.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/dicom/quick_scan.h:20, from core/file/dicom/quick_scan.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 25/548) [CC] tmp/core/formats/mrtrix_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/base.cpp -o tmp/core/image_io/base.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cassert:45, from ./core/image_io/base.h:20, from core/image_io/base.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 26/548) [CC] tmp/core/math/stats/glm.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix_gz.cpp -o tmp/core/formats/mrtrix_gz.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from ./core/file/utils.h:20, from core/formats/mrtrix_gz.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 27/548) [CC] tmp/core/file/mgh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/mgh.cpp -o tmp/core/file/mgh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cctype:46, from core/file/mgh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 28/548) [CC] tmp/core/math/erfinv.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/erfinv.cpp -o tmp/core/math/erfinv.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from ./core/math/math.h:20, from ./core/math/erfinv.h:18, from core/math/erfinv.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 29/548) [CC] tmp/core/math/zstatistic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/zstatistic.cpp -o tmp/core/math/zstatistic.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/math/zstatistic.h:21, from core/math/zstatistic.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 30/548) [CC] tmp/core/file/dicom/select_cmdline.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/select_cmdline.cpp -o tmp/core/file/dicom/select_cmdline.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/file/dicom/image.h:20, from core/file/dicom/select_cmdline.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 31/548) [CC] tmp/core/file/dicom/study.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/study.cpp -o tmp/core/file/dicom/study.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from ./core/file/dicom/patient.h:20, from core/file/dicom/study.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 32/548) [CC] tmp/core/signal_handler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/signal_handler.cpp -o tmp/core/signal_handler.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from core/signal_handler.h:20, from core/signal_handler.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 33/548) [CC] tmp/core/file/dicom/tree.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/tree.cpp -o tmp/core/file/dicom/tree.o: In file included from /usr/include/sys/types.h:25, from ./core/file/path.h:20, from core/file/dicom/tree.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 34/548) [CC] tmp/core/formats/nifti2_gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/nifti2_gz.cpp -o tmp/core/formats/nifti2_gz.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from ./core/file/nifti_utils.h:20, from core/formats/nifti2_gz.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 35/548) [CC] tmp/core/image_io/pipe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/pipe.cpp -o tmp/core/image_io/pipe.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from core/image_io/pipe.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 36/548) [CC] tmp/core/file/tiff.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/tiff.cpp -o tmp/core/file/tiff.o: In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/x86_64-redhat-linux/16/include/stdint.h:11, from /usr/include/tiffconf-64.h:19, from /usr/include/tiffconf.h:9, from /usr/include/tiff.h:28, from /usr/include/tiffio.h:31, from ./core/file/tiff.h:20, from core/file/tiff.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 37/548) [CC] tmp/core/formats/ram.o ( 38/548) [CC] tmp/core/misc/bitset.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/misc/bitset.cpp -o tmp/core/misc/bitset.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/atomic:51, from ./core/misc/bitset.h:21, from core/misc/bitset.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 39/548) [CC] tmp/core/app.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/app.cpp -o tmp/core/app.o: In file included from /usr/include/unistd.h:25, from core/app.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 40/548) [CC] tmp/core/image_io/default.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/default.cpp -o tmp/core/image_io/default.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from core/image_io/default.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 41/548) [CC] tmp/core/stats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/stats.cpp -o tmp/core/stats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from core/app.h:20, from core/stats.h:21, from core/stats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 42/548) [CC] tmp/core/file/dicom/element.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/element.cpp -o tmp/core/file/dicom/element.o: In file included from /usr/include/sys/types.h:25, from ./core/file/path.h:20, from core/file/dicom/element.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 43/548) [CC] tmp/core/formats/png.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/png.cpp -o tmp/core/formats/png.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from ./core/formats/list.h:20, from core/formats/png.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 44/548) [CC] tmp/core/progressbar.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/progressbar.cpp -o tmp/core/progressbar.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from core/app.h:20, from core/progressbar.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 45/548) [CC] tmp/core/formats/mrtrix_sparse_legacy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix_sparse_legacy.cpp -o tmp/core/formats/mrtrix_sparse_legacy.o: In file included from /usr/include/unistd.h:25, from core/formats/mrtrix_sparse_legacy.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 46/548) [CC] tmp/core/formats/xds.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/xds.cpp -o tmp/core/formats/xds.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from ./core/file/ofstream.h:21, from core/formats/xds.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 47/548) [CC] tmp/core/image_io/ram.o ( 48/548) [CC] tmp/core/formats/mgh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/stats/glm.cpp -o tmp/core/math/stats/glm.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/math/stats/glm.h:20, from core/math/stats/glm.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ./core/math/stats/glm.h: In member function ‘MR::Math::Stats::GLM::Hypothesis::Hypothesis(Eigen::Matrix const&, unsigned long)’: ./core/math/stats/glm.h:91:17: warning: ‘this_6(D)’ may be used uninitialized [-Wmaybe-uninitialized] 91 | c (check_rank (in, index)), | ^~~~~~~~~~~~~~~~~~~~~~~~~~ core/math/stats/glm.cpp:524:21: note: by argument 1 of type ‘const struct Hypothesis *’ to ‘MR::Math::Stats::GLM::Hypothesis::check_rank(Eigen::Matrix const&, unsigned long) const’ declared here 524 | matrix_type Hypothesis::check_rank (const matrix_type& in, const size_t index) const | ^~~~~~~~~~ ( 49/548) [CC] tmp/core/file/mmap.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mgh.cpp -o tmp/core/formats/mgh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from core/formats/mgh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 50/548) [CC] tmp/core/image_io/mosaic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/mmap.cpp -o tmp/core/file/mmap.o: In file included from /usr/include/fcntl.h:25, from core/file/mmap.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 51/548) [CC] tmp/core/image_io/sparse.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/mosaic.cpp -o tmp/core/image_io/mosaic.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from core/image_io/mosaic.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 52/548) [CC] tmp/core/metadata/slice_encoding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/sparse.cpp -o tmp/core/image_io/sparse.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from core/image_io/sparse.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 53/548) [CC] tmp/core/formats/mrtrix.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/metadata/slice_encoding.cpp -o tmp/core/metadata/slice_encoding.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from ./core/metadata/slice_encoding.h:20, from core/metadata/slice_encoding.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 54/548) [CC] tmp/core/file/key_value.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix.cpp -o tmp/core/formats/mrtrix.o: In file included from /usr/include/unistd.h:25, from core/formats/mrtrix.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 55/548) [CC] tmp/core/image_io/png.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/key_value.cpp -o tmp/core/file/key_value.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from core/file/key_value.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 56/548) [CC] tmp/core/file/dicom/image.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/png.cpp -o tmp/core/image_io/png.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from ./core/image_io/png.h:22, from core/image_io/png.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 57/548) [CC] tmp/core/mrtrix.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/mrtrix.cpp -o tmp/core/mrtrix.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from core/mrtrix.h:20, from core/mrtrix.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 58/548) [CC] tmp/core/image_io/tiff.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/image.cpp -o tmp/core/file/dicom/image.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cerrno:46, from ./core/exception.h:20, from core/file/dicom/image.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 59/548) [CC] tmp/core/formats/tiff.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/tiff.cpp -o tmp/core/image_io/tiff.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from core/image_io/tiff.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 60/548) [CC] tmp/core/thread.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/tiff.cpp -o tmp/core/formats/tiff.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from core/formats/tiff.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 61/548) [CC] tmp/core/image_io/scratch.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/thread.cpp -o tmp/core/thread.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/thread:36, from core/thread.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 62/548) [CC] tmp/core/image_io/gz.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/scratch.cpp -o tmp/core/image_io/scratch.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from core/image_io/scratch.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 63/548) [CC] tmp/core/file/dicom/patient.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/image_io/gz.cpp -o tmp/core/image_io/gz.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from core/image_io/gz.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 64/548) [CC] tmp/core/axes.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/axes.cpp -o tmp/core/axes.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/compare:40, from /usr/include/c++/16/array:40, from core/axes.h:21, from core/axes.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 65/548) [CC] tmp/core/formats/nifti2.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/patient.cpp -o tmp/core/file/dicom/patient.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from ./core/file/dicom/patient.h:20, from core/file/dicom/patient.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 66/548) [CC] tmp/core/formats/mri.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/nifti2.cpp -o tmp/core/formats/nifti2.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from ./core/file/nifti_utils.h:20, from core/formats/nifti2.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 67/548) [CC] tmp/core/exception.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mri.cpp -o tmp/core/formats/mri.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from core/formats/mri.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 68/548) [CC] tmp/core/math/average_space.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/exception.cpp -o tmp/core/exception.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from core/app.h:20, from core/exception.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 69/548) [CC] tmp/core/version.o ( 70/548) [CC] tmp/core/metadata/phase_encoding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/metadata/phase_encoding.cpp -o tmp/core/metadata/phase_encoding.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Dense:1, from ./core/metadata/phase_encoding.h:20, from core/metadata/phase_encoding.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 71/548) [CC] tmp/core/formats/dicom.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/dicom.cpp -o tmp/core/formats/dicom.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from core/formats/dicom.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 72/548) [CC] tmp/core/file/dicom/series.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/dicom/series.cpp -o tmp/core/file/dicom/series.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from ./core/file/dicom/series.h:20, from core/file/dicom/series.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 73/548) [CC] tmp/core/math/stats/shuffle.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/stats/shuffle.cpp -o tmp/core/math/stats/shuffle.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/math/stats/shuffle.h:21, from core/math/stats/shuffle.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 74/548) [CC] tmp/core/filter/connected_components.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/filter/connected_components.cpp -o tmp/core/filter/connected_components.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from ./core/filter/connected_components.h:21, from core/filter/connected_components.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 75/548) [CC] tmp/core/formats/mrtrix_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/formats/mrtrix_utils.cpp -o tmp/core/formats/mrtrix_utils.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from ./core/formats/mrtrix_utils.h:20, from core/formats/mrtrix_utils.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 76/548) [CC] tmp/core/file/name_parser.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/name_parser.cpp -o tmp/core/file/name_parser.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/stl_algobase.h:59, from /usr/include/c++/16/algorithm:62, from core/file/name_parser.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 77/548) [CC] tmp/core/adapter/reslice.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/adapter/reslice.cpp -o tmp/core/adapter/reslice.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from ./core/adapter/reslice.h:20, from core/adapter/reslice.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 78/548) [CC] tmp/core/file/config.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/config.cpp -o tmp/core/file/config.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from core/file/config.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 79/548) [CC] tmp/core/dwi/shells.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/dwi/shells.cpp -o tmp/core/dwi/shells.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from ./core/dwi/shells.h:21, from core/dwi/shells.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 80/548) [CC] tmp/core/file/json_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/json_utils.cpp -o tmp/core/file/json_utils.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from core/file/json_utils.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 81/548) [CC] tmp/core/file/nifti_utils.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/file/nifti_utils.cpp -o tmp/core/file/nifti_utils.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from core/file/nifti_utils.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 82/548) [CC] tmp/core/dwi/gradient.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/average_space.cpp -o tmp/core/math/average_space.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cfloat:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/unsupported/Eigen/MatrixFunctions:14, from ./core/math/average_space.h:20, from core/math/average_space.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 83/548) [CC] tmp/core/math/betainc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/math/betainc.cpp -o tmp/core/math/betainc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /usr/include/c++/16/math.h:36, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/unsupported/Eigen/SpecialFunctions:13, from ./core/math/betainc.h:21, from core/math/betainc.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 84/548) [CC] tmp/src/exec_version.o ( 85/548) [CC] tmp/cmd/warpinvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE core/dwi/gradient.cpp -o tmp/core/dwi/gradient.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/dwi/gradient.h:20, from core/dwi/gradient.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 86/548) [LD] lib/libmrtrix.so g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/warpinvert.cpp -o tmp/cmd/warpinvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/warpinvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 87/548) [CC] tmp/cmd/warpinit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/warpinit.cpp -o tmp/cmd/warpinit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/warpinit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 88/548) [CC] tmp/cmd/warpcorrect.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/warpcorrect.cpp -o tmp/cmd/warpcorrect.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/warpcorrect.cpp:16: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 89/548) [CC] tmp/cmd/warpconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/warpconvert.cpp -o tmp/cmd/warpconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/warpconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 90/548) [CC] tmp/cmd/warp2metric.o ( 91/548) [LB] bin/warpinvert ( 92/548) [LB] bin/warpinit ( 93/548) [LB] bin/warpcorrect ( 94/548) [LB] bin/warpconvert g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/warp2metric.cpp -o tmp/cmd/warp2metric.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/warp2metric.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 95/548) [LB] bin/warp2metric ( 96/548) [CC] tmp/src/surface/polygon.o ( 97/548) [CC] tmp/src/connectome/lut.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/polygon.cpp -o tmp/src/surface/polygon.o: In file included from /usr/include/assert.h:35, from src/surface/polygon.h:20, from src/surface/polygon.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 98/548) [CC] tmp/src/surface/mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/connectome/lut.cpp -o tmp/src/connectome/lut.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/connectome/lut.h:20, from src/connectome/lut.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ ( 99/548) [CC] tmp/src/surface/scalar.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/mesh.cpp -o tmp/src/surface/mesh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from src/surface/mesh.h:21, from src/surface/mesh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (100/548) [CC] tmp/src/surface/freesurfer.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/scalar.cpp -o tmp/src/surface/scalar.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from src/surface/mesh.h:21, from src/surface/scalar.h:21, from src/surface/scalar.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (101/548) [CC] tmp/cmd/voxel2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/freesurfer.cpp -o tmp/src/surface/freesurfer.o: In file included from /usr/include/bits/libc-header-start.h:33, from /usr/include/stdint.h:26, from /usr/lib/gcc/x86_64-redhat-linux/16/include/stdint.h:11, from src/surface/freesurfer.h:20, from src/surface/freesurfer.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (102/548) [CC] tmp/src/connectome/connectome.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/connectome/connectome.cpp -o tmp/src/connectome/connectome.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Dense:1, from src/connectome/connectome.h:21, from src/connectome/connectome.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (103/548) [CC] tmp/cmd/voxel2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/voxel2mesh.cpp -o tmp/cmd/voxel2mesh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/voxel2mesh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (104/548) [LB] bin/voxel2mesh g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/voxel2fixel.cpp -o tmp/cmd/voxel2fixel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/voxel2fixel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (105/548) [LB] bin/voxel2fixel (106/548) [CC] tmp/cmd/vectorstats.o (107/548) [CC] tmp/src/stats/permtest.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/vectorstats.cpp -o tmp/cmd/vectorstats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/vectorstats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (108/548) [CC] tmp/src/dwi/tractography/file_base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/stats/permtest.cpp -o tmp/src/stats/permtest.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/stats/permtest.h:20, from src/stats/permtest.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (109/548) [LB] bin/vectorstats (110/548) [CC] tmp/src/dwi/tractography/seeding/list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/file_base.cpp -o tmp/src/dwi/tractography/file_base.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/iomanip:43, from src/dwi/tractography/file_base.h:20, from src/dwi/tractography/file_base.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (111/548) [CC] tmp/src/dwi/tractography/properties.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/list.cpp -o tmp/src/dwi/tractography/seeding/list.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/dwi/tractography/seeding/list.h:21, from src/dwi/tractography/seeding/list.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (112/548) [CC] tmp/cmd/tsfvalidate.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/properties.cpp -o tmp/src/dwi/tractography/properties.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/dwi/tractography/properties.h:20, from src/dwi/tractography/properties.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (113/548) [CC] tmp/src/dwi/tractography/rng.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/rng.cpp -o tmp/src/dwi/tractography/rng.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/random:36, from ./core/math/rng.h:20, from src/dwi/tractography/rng.h:20, from src/dwi/tractography/rng.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (114/548) [CC] tmp/src/dwi/tractography/roi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tsfvalidate.cpp -o tmp/cmd/tsfvalidate.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tsfvalidate.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (115/548) [CC] tmp/cmd/tsfthreshold.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tsfthreshold.cpp -o tmp/cmd/tsfthreshold.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tsfthreshold.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (116/548) [CC] tmp/cmd/tsfsmooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/roi.cpp -o tmp/src/dwi/tractography/roi.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/dwi/tractography/properties.h:20, from src/dwi/tractography/roi.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (117/548) [LB] bin/tsfvalidate (118/548) [LB] bin/tsfthreshold (119/548) [CC] tmp/cmd/tsfmult.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tsfsmooth.cpp -o tmp/cmd/tsfsmooth.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tsfsmooth.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (120/548) [LB] bin/tsfsmooth (121/548) [CC] tmp/cmd/tsfinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tsfmult.cpp -o tmp/cmd/tsfmult.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tsfmult.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (122/548) [LB] bin/tsfmult (123/548) [CC] tmp/cmd/tsfdivide.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tsfinfo.cpp -o tmp/cmd/tsfinfo.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tsfinfo.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (124/548) [LB] bin/tsfinfo (125/548) [CC] tmp/cmd/transformconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tsfdivide.cpp -o tmp/cmd/tsfdivide.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tsfdivide.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (126/548) [LB] bin/tsfdivide (127/548) [CC] tmp/cmd/transformcompose.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/transformconvert.cpp -o tmp/cmd/transformconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cfloat:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/unsupported/Eigen/MatrixFunctions:14, from cmd/transformconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (128/548) [LB] bin/transformconvert (129/548) [CC] tmp/cmd/transformcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/transformcompose.cpp -o tmp/cmd/transformcompose.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/transformcompose.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (130/548) [LB] bin/transformcompose (131/548) [CC] tmp/cmd/tensor2metric.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tensor2metric.cpp -o tmp/cmd/tensor2metric.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tensor2metric.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (132/548) [LB] bin/tensor2metric (133/548) [CC] tmp/cmd/tcktransform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tcktransform.cpp -o tmp/cmd/tcktransform.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tcktransform.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (134/548) [LB] bin/tcktransform (135/548) [CC] tmp/cmd/tckstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckstats.cpp -o tmp/cmd/tckstats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tckstats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (136/548) [CC] tmp/src/dwi/tractography/weights.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/weights.cpp -o tmp/src/dwi/tractography/weights.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cassert:45, from ./core/cmdline_option.h:20, from src/dwi/tractography/weights.h:20, from src/dwi/tractography/weights.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (137/548) [LB] bin/tckstats (138/548) [CC] tmp/cmd/tcksift2.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/transformcalc.cpp -o tmp/cmd/transformcalc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Geometry:11, from cmd/transformcalc.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (139/548) [LB] bin/transformcalc g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tcksift2.cpp -o tmp/cmd/tcksift2.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tcksift2.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/mapping/fixel_td_map.h:21, from cmd/tcksift2.cpp:26: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (140/548) [CC] tmp/src/dwi/directions/mask.o (141/548) [CC] tmp/src/dwi/directions/predefined.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/directions/mask.cpp -o tmp/src/dwi/directions/mask.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from src/dwi/directions/mask.h:21, from src/dwi/directions/mask.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (142/548) [CC] tmp/src/dwi/tractography/SIFT2/line_search.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/directions/predefined.cpp -o tmp/src/dwi/directions/predefined.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/dwi/directions/predefined.h:21, from src/dwi/directions/predefined.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (143/548) [CC] tmp/src/dwi/tractography/ACT/act.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/ACT/act.cpp -o tmp/src/dwi/tractography/ACT/act.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/ACT/act.h:20, from src/dwi/tractography/ACT/act.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (144/548) [CC] tmp/src/dwi/tractography/resampling/fixed_num_points.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/line_search.cpp -o tmp/src/dwi/tractography/SIFT2/line_search.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/dwi/tractography/SIFT2/line_search.h:21, from src/dwi/tractography/SIFT2/line_search.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/line_search.cpp:19: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (145/548) [CC] tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/fixed_num_points.cpp -o tmp/src/dwi/tractography/resampling/fixed_num_points.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/resampling/resampling.h:21, from src/dwi/tractography/resampling/fixed_num_points.h:21, from src/dwi/tractography/resampling/fixed_num_points.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (146/548) [CC] tmp/src/dwi/tractography/mapping/twi_stats.o (147/548) [CC] tmp/src/dwi/directions/set.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/directions/set.cpp -o tmp/src/dwi/directions/set.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from src/dwi/directions/set.h:21, from src/dwi/directions/set.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (148/548) [CC] tmp/src/dwi/tractography/SIFT/sift.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/sift.cpp -o tmp/src/dwi/tractography/SIFT/sift.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/SIFT/sift.h:20, from src/dwi/tractography/SIFT/sift.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (149/548) [CC] tmp/src/dwi/tractography/SIFT/track_index_range.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/track_index_range.cpp -o tmp/src/dwi/tractography/SIFT/track_index_range.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from ./core/progressbar.h:20, from src/dwi/tractography/SIFT/track_index_range.h:20, from src/dwi/tractography/SIFT/track_index_range.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (150/548) [CC] tmp/src/dwi/fmls.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/coeff_optimiser.cpp -o tmp/src/dwi/tractography/SIFT2/coeff_optimiser.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/mutex:36, from src/dwi/tractography/SIFT2/coeff_optimiser.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/coeff_optimiser.cpp:21: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (151/548) [CC] tmp/src/dwi/tractography/mapping/fixel_td_map.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/fixel_td_map.cpp -o tmp/src/dwi/tractography/mapping/fixel_td_map.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/dwi/fixel_map.h:21, from src/dwi/tractography/mapping/fixel_td_map.h:21, from src/dwi/tractography/mapping/fixel_td_map.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (152/548) [CC] tmp/src/dwi/tractography/mapping/mapping.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/mapping.cpp -o tmp/src/dwi/tractography/mapping/mapping.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/dwi/tractography/mapping/mapping.h:20, from src/dwi/tractography/mapping/mapping.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (153/548) [CC] tmp/src/dwi/tractography/SIFT2/fixel_updater.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/fmls.cpp -o tmp/src/dwi/fmls.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/dwi/fmls.h:20, from src/dwi/fmls.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (154/548) [CC] tmp/src/dwi/tractography/SIFT2/reg_calculator.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/fixel_updater.cpp -o tmp/src/dwi/tractography/SIFT2/fixel_updater.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/mutex:36, from src/dwi/tractography/SIFT2/fixel_updater.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/fixel_updater.cpp:20: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (155/548) [CC] tmp/src/dwi/tractography/mapping/voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/voxel.cpp -o tmp/src/dwi/tractography/mapping/voxel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from src/dwi/tractography/mapping/voxel.h:22, from src/dwi/tractography/mapping/voxel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (156/548) [CC] tmp/src/dwi/tractography/resampling/downsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/reg_calculator.cpp -o tmp/src/dwi/tractography/SIFT2/reg_calculator.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/mutex:36, from src/dwi/tractography/SIFT2/reg_calculator.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/reg_calculator.cpp:20: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (157/548) [CC] tmp/src/dwi/tractography/resampling/upsampler.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/downsampler.cpp -o tmp/src/dwi/tractography/resampling/downsampler.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/tracking/types.h:21, from src/dwi/tractography/tracking/generated_track.h:21, from src/dwi/tractography/resampling/downsampler.h:21, from src/dwi/tractography/resampling/downsampler.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (158/548) [CC] tmp/src/dwi/tractography/resampling/fixed_step_size.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/fixed_step_size.cpp -o tmp/src/dwi/tractography/resampling/fixed_step_size.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/resampling/resampling.h:21, from src/dwi/tractography/resampling/fixed_step_size.h:21, from src/dwi/tractography/resampling/fixed_step_size.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (159/548) [CC] tmp/src/dwi/tractography/SIFT/proc_mask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/upsampler.cpp -o tmp/src/dwi/tractography/resampling/upsampler.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/resampling/resampling.h:21, from src/dwi/tractography/resampling/upsampler.h:21, from src/dwi/tractography/resampling/upsampler.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (160/548) [CC] tmp/src/dwi/tractography/mapping/mapper_plugins.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/proc_mask.cpp -o tmp/src/dwi/tractography/SIFT/proc_mask.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cassert:45, from ./core/cmdline_option.h:20, from src/dwi/tractography/SIFT/proc_mask.h:20, from src/dwi/tractography/SIFT/proc_mask.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (161/548) [CC] tmp/src/dwi/tractography/SIFT2/tckfactor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/mapper_plugins.cpp -o tmp/src/dwi/tractography/mapping/mapper_plugins.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/mapping/mapper_plugins.h:21, from src/dwi/tractography/mapping/mapper_plugins.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (162/548) [CC] tmp/src/dwi/tractography/SIFT/track_contribution.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/track_contribution.cpp -o tmp/src/dwi/tractography/SIFT/track_contribution.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from src/dwi/tractography/SIFT/track_contribution.h:21, from src/dwi/tractography/SIFT/track_contribution.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (163/548) [CC] tmp/src/dwi/tractography/mapping/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/tckfactor.cpp -o tmp/src/dwi/tractography/SIFT2/tckfactor.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/dwi/tractography/SIFT2/tckfactor.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model.h:25, from src/dwi/tractography/SIFT2/tckfactor.h:30, from src/dwi/tractography/SIFT2/tckfactor.cpp:31: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT2/tckfactor.h:59:38: required from here 59 | class TckFactor : public SIFT::Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/model.h:38: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT2::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (164/548) [CC] tmp/src/dwi/tractography/SIFT2/streamline_stats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/mapper.cpp -o tmp/src/dwi/tractography/mapping/mapper.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/mapping/mapper.h:21, from src/dwi/tractography/mapping/mapper.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (165/548) [CC] tmp/src/dwi/tractography/resampling/arc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT2/streamline_stats.cpp -o tmp/src/dwi/tractography/SIFT2/streamline_stats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cassert:45, from src/dwi/tractography/SIFT2/streamline_stats.h:21, from src/dwi/tractography/SIFT2/streamline_stats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (166/548) [CC] tmp/src/dwi/tractography/resampling/resampling.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/resampling.cpp -o tmp/src/dwi/tractography/resampling/resampling.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/resampling/resampling.h:21, from src/dwi/tractography/resampling/resampling.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (167/548) [CC] tmp/src/dwi/tractography/resampling/endpoints.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/endpoints.cpp -o tmp/src/dwi/tractography/resampling/endpoints.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/resampling/resampling.h:21, from src/dwi/tractography/resampling/endpoints.h:21, from src/dwi/tractography/resampling/endpoints.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (168/548) [CC] tmp/cmd/tcksift.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/resampling/arc.cpp -o tmp/src/dwi/tractography/resampling/arc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/resampling/resampling.h:21, from src/dwi/tractography/resampling/arc.h:21, from src/dwi/tractography/resampling/arc.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (169/548) [LB] bin/tcksift2 (170/548) [CC] tmp/src/dwi/tractography/SIFT/sifter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tcksift.cpp -o tmp/cmd/tcksift.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tcksift.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/sifter.h:27, from cmd/tcksift.cpp:27: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT/sifter.h:48:29: required from here 48 | class SIFTer : public Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/fixel.h:23, from src/dwi/tractography/SIFT/sifter.h:29: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (171/548) [CC] tmp/src/dwi/tractography/SIFT/gradient_sort.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/gradient_sort.cpp -o tmp/src/dwi/tractography/SIFT/gradient_sort.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from src/dwi/tractography/SIFT/gradient_sort.h:21, from src/dwi/tractography/SIFT/gradient_sort.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (172/548) [CC] tmp/cmd/tcksample.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/SIFT/sifter.cpp -o tmp/src/dwi/tractography/SIFT/sifter.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/SIFT/sifter.h:22, from src/dwi/tractography/SIFT/sifter.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/sifter.h:27: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/SIFT/model.h:58:13: required from ‘class MR::DWI::Tractography::SIFT::Model’ 58 | class Model : public ModelBase | ^~~~~ src/dwi/tractography/SIFT/sifter.h:48:29: required from here 48 | class SIFTer : public Model | ^~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30, from src/dwi/tractography/SIFT/fixel.h:23, from src/dwi/tractography/SIFT/sifter.h:29: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::SIFT::Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (173/548) [LB] bin/tcksift g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tcksample.cpp -o tmp/cmd/tcksample.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tcksample.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (174/548) [LB] bin/tcksample (175/548) [CC] tmp/cmd/tckresample.o (176/548) [CC] tmp/src/dwi/tractography/mapping/gaussian/mapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckresample.cpp -o tmp/cmd/tckresample.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tckresample.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (177/548) [LB] bin/tckresample g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/gaussian/mapper.cpp -o tmp/src/dwi/tractography/mapping/gaussian/mapper.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/mapping/gaussian/mapper.h:21, from src/dwi/tractography/mapping/gaussian/mapper.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (178/548) [CC] tmp/cmd/tckmap.o (179/548) [CC] tmp/src/dwi/tractography/mapping/writer.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/mapping/writer.cpp -o tmp/src/dwi/tractography/mapping/writer.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from src/dwi/tractography/mapping/writer.h:20, from src/dwi/tractography/mapping/writer.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (180/548) [CC] tmp/cmd/tckinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckinfo.cpp -o tmp/cmd/tckinfo.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tckinfo.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (181/548) [LB] bin/tckinfo (182/548) [CC] tmp/src/dwi/tractography/GT/gt.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/gt.cpp -o tmp/src/dwi/tractography/GT/gt.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/iostream:40, from src/dwi/tractography/GT/gt.h:24, from src/dwi/tractography/GT/gt.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (183/548) [CC] tmp/src/dwi/tractography/GT/externalenergy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/externalenergy.cpp -o tmp/src/dwi/tractography/GT/externalenergy.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/GT/externalenergy.h:20, from src/dwi/tractography/GT/externalenergy.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (184/548) [CC] tmp/cmd/tckglobal.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckmap.cpp -o tmp/cmd/tckmap.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from cmd/tckmap.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (185/548) [LB] bin/tckmap g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckglobal.cpp -o tmp/cmd/tckglobal.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tckglobal.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (186/548) [CC] tmp/src/dwi/tractography/GT/mhsampler.o (187/548) [CC] tmp/src/dwi/tractography/GT/internalenergy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/mhsampler.cpp -o tmp/src/dwi/tractography/GT/mhsampler.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/dwi/tractography/GT/mhsampler.h:20, from src/dwi/tractography/GT/mhsampler.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (188/548) [CC] tmp/src/dwi/tractography/GT/particlegrid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/internalenergy.cpp -o tmp/src/dwi/tractography/GT/internalenergy.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/dwi/tractography/GT/internalenergy.h:20, from src/dwi/tractography/GT/internalenergy.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (189/548) [CC] tmp/src/dwi/tractography/GT/particle.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/particle.cpp -o tmp/src/dwi/tractography/GT/particle.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/dwi/tractography/GT/particle.h:20, from src/dwi/tractography/GT/particle.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (190/548) [CC] tmp/src/dwi/tractography/algorithms/iFOD2.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/GT/particlegrid.cpp -o tmp/src/dwi/tractography/GT/particlegrid.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/mutex:36, from src/dwi/tractography/GT/particlegrid.h:20, from src/dwi/tractography/GT/particlegrid.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (191/548) [LB] bin/tckglobal g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/algorithms/iFOD2.cpp -o tmp/src/dwi/tractography/algorithms/iFOD2.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/stl_algobase.h:59, from /usr/include/c++/16/algorithm:62, from src/dwi/tractography/algorithms/iFOD2.h:20, from src/dwi/tractography/algorithms/iFOD2.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (192/548) [CC] tmp/src/dwi/tractography/tracking/method.o (193/548) [CC] tmp/src/dwi/tractography/tracking/early_exit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/method.cpp -o tmp/src/dwi/tractography/tracking/method.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from src/dwi/tractography/tracking/method.h:20, from src/dwi/tractography/tracking/method.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (194/548) [CC] tmp/src/dwi/tractography/seeding/gmwmi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/early_exit.cpp -o tmp/src/dwi/tractography/tracking/early_exit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from src/dwi/tractography/tracking/early_exit.h:20, from src/dwi/tractography/tracking/early_exit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (195/548) [CC] tmp/src/dwi/tractography/tracking/write_kernel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/write_kernel.cpp -o tmp/src/dwi/tractography/tracking/write_kernel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from src/dwi/tractography/tracking/write_kernel.h:20, from src/dwi/tractography/tracking/write_kernel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (196/548) [CC] tmp/src/dwi/tractography/ACT/gmwmi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/gmwmi.cpp -o tmp/src/dwi/tractography/seeding/gmwmi.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/seeding/gmwmi.h:21, from src/dwi/tractography/seeding/gmwmi.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (197/548) [CC] tmp/src/dwi/tractography/tracking/tractography.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/tractography.cpp -o tmp/src/dwi/tractography/tracking/tractography.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/tracking/tractography.h:20, from src/dwi/tractography/tracking/tractography.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (198/548) [CC] tmp/src/dwi/tractography/seeding/dynamic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/ACT/gmwmi.cpp -o tmp/src/dwi/tractography/ACT/gmwmi.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/dwi/tractography/ACT/gmwmi.h:21, from src/dwi/tractography/ACT/gmwmi.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (199/548) [CC] tmp/src/dwi/tractography/tracking/shared.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/tracking/shared.cpp -o tmp/src/dwi/tractography/tracking/shared.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/atomic:51, from src/dwi/tractography/tracking/shared.h:20, from src/dwi/tractography/tracking/shared.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (200/548) [CC] tmp/cmd/tckgen.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/dynamic.cpp -o tmp/src/dwi/tractography/seeding/dynamic.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from src/dwi/tractography/seeding/dynamic.h:20, from src/dwi/tractography/seeding/dynamic.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (201/548) [CC] tmp/src/dwi/tractography/seeding/seeding.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/seeding.cpp -o tmp/src/dwi/tractography/seeding/seeding.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/dwi/tractography/properties.h:20, from src/dwi/tractography/seeding/seeding.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/seeding/seeding.h:23, from src/dwi/tractography/seeding/seeding.cpp:18: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (202/548) [CC] tmp/src/dwi/tractography/seeding/basic.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/seeding/basic.cpp -o tmp/src/dwi/tractography/seeding/basic.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/roi.h:20, from src/dwi/tractography/seeding/basic.h:20, from src/dwi/tractography/seeding/basic.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (203/548) [CC] tmp/src/dwi/tractography/algorithms/iFOD1.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/algorithms/iFOD1.cpp -o tmp/src/dwi/tractography/algorithms/iFOD1.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from ./core/math/math.h:20, from ./core/math/legendre.h:20, from ./core/math/SH.h:20, from src/dwi/tractography/algorithms/iFOD1.h:20, from src/dwi/tractography/algorithms/iFOD1.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (204/548) [CC] tmp/src/dwi/tractography/editing/receiver.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/editing/receiver.cpp -o tmp/src/dwi/tractography/editing/receiver.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from src/dwi/tractography/editing/receiver.h:21, from src/dwi/tractography/editing/receiver.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (205/548) [CC] tmp/src/dwi/tractography/editing/worker.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckgen.cpp -o tmp/cmd/tckgen.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tckgen.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:21, from src/dwi/tractography/seeding/dynamic.h:32, from src/dwi/tractography/tracking/exec.h:36, from cmd/tckgen.cpp:23: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ src/dwi/tractography/seeding/dynamic.h:207:49: required from here 207 | class Dynamic : public Base, public SIFT::ModelBase | ^~~~~~~~~~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = MR::DWI::Tractography::Seeding::Fixel_TD_seed]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (206/548) [LB] bin/tckgen g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/editing/worker.cpp -o tmp/src/dwi/tractography/editing/worker.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from src/dwi/tractography/editing/worker.h:21, from src/dwi/tractography/editing/worker.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (207/548) [CC] tmp/src/dwi/tractography/editing/editing.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/editing/editing.cpp -o tmp/src/dwi/tractography/editing/editing.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/tractography/editing/editing.h:20, from src/dwi/tractography/editing/editing.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (208/548) [CC] tmp/cmd/tckedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckedit.cpp -o tmp/cmd/tckedit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from cmd/tckedit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (209/548) [LB] bin/tckedit (210/548) [CC] tmp/cmd/tckdfc.o (211/548) [CC] tmp/cmd/tckconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckdfc.cpp -o tmp/cmd/tckdfc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tckdfc.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (212/548) [LB] bin/tckdfc g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tckconvert.cpp -o tmp/cmd/tckconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdio:46, from cmd/tckconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (213/548) [LB] bin/tckconvert (214/548) [CC] tmp/cmd/tck2fixel.o (215/548) [CC] tmp/src/dwi/tractography/connectome/matrix.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/matrix.cpp -o tmp/src/dwi/tractography/connectome/matrix.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from src/dwi/tractography/connectome/matrix.h:20, from src/dwi/tractography/connectome/matrix.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (216/548) [CC] tmp/cmd/tck2connectome.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tck2connectome.cpp -o tmp/cmd/tck2connectome.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from cmd/tck2connectome.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (217/548) [CC] tmp/src/dwi/tractography/connectome/tck2nodes.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/tck2fixel.cpp -o tmp/cmd/tck2fixel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/tck2fixel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (218/548) [LB] bin/tck2fixel g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/tck2nodes.cpp -o tmp/src/dwi/tractography/connectome/tck2nodes.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/dwi/tractography/connectome/tck2nodes.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (219/548) [CC] tmp/src/dwi/tractography/connectome/connectome.o (220/548) [CC] tmp/src/gui/dialog/report_exception.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/connectome.cpp -o tmp/src/dwi/tractography/connectome/connectome.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from src/dwi/tractography/connectome/connectome.h:20, from src/dwi/tractography/connectome/connectome.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (221/548) [LB] bin/tck2connectome g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/report_exception.cpp -o tmp/src/gui/dialog/report_exception.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from src/gui/dialog/report_exception.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (222/548) [CC] tmp/src/gui/dwi/renderer.o (223/548) [CC] tmp/src/gui/opengl/lighting.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/opengl/lighting.cpp -o tmp/src/gui/opengl/lighting.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/opengl/lighting.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (224/548) [CC] tmp/src/gui/dialog/list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/list.cpp -o tmp/src/gui/dialog/list.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from src/gui/dialog/list.h:20, from src/gui/dialog/list.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (225/548) [CC] tmp/src/gui/dwi/render_frame.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dwi/renderer.cpp -o tmp/src/gui/dwi/renderer.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/gui/dwi/renderer.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (226/548) [MOC] tmp/src/gui/color_button_moc.cpp (227/548) [CC] tmp/src/gui/color_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/color_button_moc.cpp -o tmp/src/gui/color_button_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/color_button_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (228/548) [CC] tmp/src/gui/dialog/dialog.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dwi/render_frame.cpp -o tmp/src/gui/dwi/render_frame.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from src/gui/dwi/render_frame.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (229/548) [CC] tmp/src/gui/shapes/halfsphere.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/dialog.cpp -o tmp/src/gui/dialog/dialog.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/gui/dialog/dialog.cpp:19: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (230/548) [CC] tmp/cmd/shview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/shapes/halfsphere.cpp -o tmp/src/gui/shapes/halfsphere.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/gui/shapes/halfsphere.h:20, from src/gui/shapes/halfsphere.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (231/548) [CC] tmp/src/gui/lighting_dock.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ cmd/shview.cpp -o tmp/cmd/shview.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from cmd/shview.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (232/548) [RCC] tmp/src/gui/shview/icons.cpp /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/./build:746: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (self.cmd[1], mode='w', encoding='utf-8') as fd: (233/548) [CC] tmp/src/gui/shview/icons.o (234/548) [CC] tmp/src/gui/shview/render_window.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/lighting_dock.cpp -o tmp/src/gui/lighting_dock.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/lighting_dock.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (235/548) [MOC] tmp/src/gui/dwi/render_frame_moc.cpp (236/548) [CC] tmp/src/gui/dwi/render_frame_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/dwi/render_frame_moc.cpp -o tmp/src/gui/dwi/render_frame_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/dwi/render_frame_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (237/548) [MOC] tmp/src/gui/lighting_dock_moc.cpp (238/548) [CC] tmp/src/gui/lighting_dock_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/shview/render_window.cpp -o tmp/src/gui/shview/render_window.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/gui/shview/render_window.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (239/548) [MOC] tmp/src/gui/opengl/lighting_moc.cpp (240/548) [CC] tmp/src/gui/opengl/lighting_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/lighting_dock_moc.cpp -o tmp/src/gui/lighting_dock_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/lighting_dock_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (241/548) [CC] tmp/src/gui/shview/file_open.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/opengl/lighting_moc.cpp -o tmp/src/gui/opengl/lighting_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/opengl/lighting_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (242/548) [CC] tmp/src/gui/gui.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/shview/file_open.cpp -o tmp/src/gui/shview/file_open.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from src/gui/shview/file_open.h:20, from src/gui/shview/file_open.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (243/548) [CC] tmp/src/gui/opengl/font.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/gui.cpp -o tmp/src/gui/gui.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/locale:40, from src/gui/gui.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (244/548) [CC] tmp/src/gui/color_button.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/opengl/font.cpp -o tmp/src/gui/opengl/font.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/iostream:40, from ./core/debug.h:20, from src/gui/opengl/font.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (245/548) [CC] tmp/src/gui/dialog/dicom.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/color_button.cpp -o tmp/src/gui/color_button.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/color_button.h:20, from src/gui/color_button.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (246/548) [CC] tmp/src/gui/opengl/shader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/opengl/shader.cpp -o tmp/src/gui/opengl/shader.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/opengl/shader.h:20, from src/gui/opengl/shader.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (247/548) [CC] tmp/src/gui/projection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/dicom.cpp -o tmp/src/gui/dialog/dicom.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from ./core/file/dicom/tree.h:20, from src/gui/dialog/dicom.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (248/548) [CC] tmp/src/gui/opengl/gl.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/projection.cpp -o tmp/src/gui/projection.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from src/gui/projection.h:20, from src/gui/projection.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (249/548) [CC] tmp/src/gui/dialog/progress.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/opengl/gl.cpp -o tmp/src/gui/opengl/gl.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/opengl/gl.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (250/548) [CC] tmp/src/gui/crosshair.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/progress.cpp -o tmp/src/gui/dialog/progress.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cassert:45, from src/gui/dialog/progress.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (251/548) [CC] tmp/src/gui/opengl/gl_core_3_3.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/opengl/gl_core_3_3.cpp -o tmp/src/gui/opengl/gl_core_3_3.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/stl_algobase.h:59, from /usr/include/c++/16/algorithm:62, from src/gui/opengl/gl_core_3_3.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (252/548) [MOC] tmp/src/gui/shview/render_window_moc.cpp (253/548) [CC] tmp/src/gui/shview/render_window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/crosshair.cpp -o tmp/src/gui/crosshair.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/gui/crosshair.h:21, from src/gui/crosshair.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (254/548) [CC] tmp/src/gui/dialog/file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/file.cpp -o tmp/src/gui/dialog/file.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qmessagebox.h:43, from /usr/include/qt5/QtWidgets/QMessageBox:1, from src/gui/dialog/file.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (255/548) [CC] tmp/cmd/shconv.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/shview/render_window_moc.cpp -o tmp/src/gui/shview/render_window_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/shview/render_window_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (256/548) [LB] bin/shview (257/548) [CC] tmp/cmd/shbasis.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/shconv.cpp -o tmp/cmd/shconv.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/shconv.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (258/548) [LB] bin/shconv (259/548) [CC] tmp/cmd/sh2response.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/shbasis.cpp -o tmp/cmd/shbasis.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from cmd/shbasis.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (260/548) [LB] bin/shbasis g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/sh2response.cpp -o tmp/cmd/sh2response.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/sh2response.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (261/548) [LB] bin/sh2response (262/548) [CC] tmp/cmd/sh2power.o (263/548) [CC] tmp/cmd/sh2peaks.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/sh2power.cpp -o tmp/cmd/sh2power.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/sh2power.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (264/548) [LB] bin/sh2power (265/548) [CC] tmp/src/dwi/directions/file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/sh2peaks.cpp -o tmp/cmd/sh2peaks.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/sh2peaks.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (266/548) [LB] bin/sh2peaks g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/directions/file.cpp -o tmp/src/dwi/directions/file.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from ./core/math/sphere.h:20, from src/dwi/directions/file.h:20, from src/dwi/directions/file.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (267/548) [CC] tmp/cmd/sh2amp.o (268/548) [CC] tmp/cmd/peaks2fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/peaks2fixel.cpp -o tmp/cmd/peaks2fixel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/peaks2fixel.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (269/548) [LB] bin/peaks2fixel g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/sh2amp.cpp -o tmp/cmd/sh2amp.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/sstream:40, from cmd/sh2amp.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (270/548) [LB] bin/sh2amp (271/548) [CC] tmp/cmd/peaks2amp.o (272/548) [CC] tmp/cmd/mtnormalise.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/peaks2amp.cpp -o tmp/cmd/peaks2amp.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/peaks2amp.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (273/548) [LB] bin/peaks2amp (274/548) [MOC] tmp/src/gui/mrview/sync/localsocketreader_moc.cpp (275/548) [CC] tmp/src/gui/mrview/sync/localsocketreader_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/localsocketreader_moc.cpp -o tmp/src/gui/mrview/sync/localsocketreader_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/sync/localsocketreader_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (276/548) [MOC] tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp (277/548) [CC] tmp/src/gui/mrview/tool/fixel/fixel_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mtnormalise.cpp -o tmp/cmd/mtnormalise.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mtnormalise.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (278/548) [LB] bin/mtnormalise g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp -o tmp/src/gui/mrview/tool/fixel/fixel_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/fixel/fixel_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (279/548) [CC] tmp/src/gui/mrview/tool/tractography/tractography.o (280/548) [CC] tmp/src/gui/mrview/tool/odf/model.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/tractography.cpp -o tmp/src/gui/mrview/tool/tractography/tractography.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/tool/tractography/tractography.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (281/548) [CC] tmp/src/gui/mrview/colourbars.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/colourbars.cpp -o tmp/src/gui/mrview/colourbars.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/mrview/colourbars.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (282/548) [CC] tmp/src/gui/mrview/mode/volume.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/model.cpp -o tmp/src/gui/mrview/tool/odf/model.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/gui/mrview/tool/odf/model.h:20, from src/gui/mrview/tool/odf/model.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (283/548) [MOC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp (284/548) [CC] tmp/src/gui/mrview/tool/tractography/tractogram_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/mode/volume.cpp -o tmp/src/gui/mrview/mode/volume.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/mrview/mode/volume.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (285/548) [MOC] tmp/src/gui/mrview/displayable_moc.cpp (286/548) [CC] tmp/src/gui/mrview/displayable_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/tractography/tractogram_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (287/548) [CC] tmp/src/gui/mrview/tool/roi_editor/model.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/displayable_moc.cpp -o tmp/src/gui/mrview/displayable_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/displayable_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (288/548) [MOC] tmp/src/gui/mrview/window_moc.cpp (289/548) [CC] tmp/src/gui/mrview/window_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/model.cpp -o tmp/src/gui/mrview/tool/roi_editor/model.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/gui/mrview/window.h:20, from src/gui/mrview/tool/roi_editor/model.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (290/548) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/window_moc.cpp -o tmp/src/gui/mrview/window_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/window_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (291/548) [CC] tmp/src/gui/mrview/tool/tractography/tractogram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/track_scalar_file.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/adjust_button.h:20, from src/gui/mrview/tool/tractography/track_scalar_file.h:20, from src/gui/mrview/tool/tractography/track_scalar_file.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (292/548) [CC] tmp/src/gui/mrview/mode/lightbox.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/tractography/tractogram.cpp -o tmp/src/gui/mrview/tool/tractography/tractogram.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from ./core/progressbar.h:20, from src/gui/mrview/tool/tractography/tractogram.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (293/548) [MOC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp (294/548) [CC] tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/mode/lightbox.cpp -o tmp/src/gui/mrview/mode/lightbox.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/gui/mrview/mode/slice.h:20, from src/gui/mrview/mode/lightbox.h:20, from src/gui/mrview/mode/lightbox.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (295/548) [CC] tmp/src/gui/mrview/tool/fixel/directory.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp -o tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/tractography/track_scalar_file_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (296/548) [MOC] tmp/src/gui/mrview/sync/syncmanager_moc.cpp (297/548) [CC] tmp/src/gui/mrview/sync/syncmanager_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/syncmanager_moc.cpp -o tmp/src/gui/mrview/sync/syncmanager_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/sync/syncmanager_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (298/548) [MOC] tmp/src/gui/mrview/tool/connectome/selection_moc.cpp (299/548) [CC] tmp/src/gui/mrview/tool/connectome/selection_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/selection_moc.cpp -o tmp/src/gui/mrview/tool/connectome/selection_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/connectome/selection_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (300/548) [MOC] tmp/src/gui/mrview/tool/odf/preview_moc.cpp (301/548) [CC] tmp/src/gui/mrview/tool/odf/preview_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/directory.cpp -o tmp/src/gui/mrview/tool/fixel/directory.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/unordered_map:36, from src/gui/mrview/tool/fixel/base_fixel.h:20, from src/gui/mrview/tool/fixel/directory.h:20, from src/gui/mrview/tool/fixel/directory.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (302/548) [CC] tmp/src/gui/mrview/sync/client.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/sync/client.cpp -o tmp/src/gui/mrview/sync/client.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtCore/QtCore:4, from /usr/include/qt5/QtNetwork/QtNetworkDepends:3, from /usr/include/qt5/QtNetwork/QtNetwork:3, from src/gui/mrview/sync/client.cpp:16: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (303/548) [CC] tmp/src/gui/shapes/sphere.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/odf/preview_moc.cpp -o tmp/src/gui/mrview/tool/odf/preview_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/odf/preview_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (304/548) [MOC] tmp/src/gui/mrview/tool/odf/odf_moc.cpp (305/548) [CC] tmp/src/gui/mrview/tool/odf/odf_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/shapes/sphere.cpp -o tmp/src/gui/shapes/sphere.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/gui/shapes/sphere.h:20, from src/gui/shapes/sphere.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (306/548) [CC] tmp/src/gui/mrview/sync/interprocesscommunicator.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/sync/interprocesscommunicator.cpp -o tmp/src/gui/mrview/sync/interprocesscommunicator.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/mrview/sync/interprocesscommunicator.cpp:16: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (307/548) [CC] tmp/cmd/mrview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/odf/odf_moc.cpp -o tmp/src/gui/mrview/tool/odf/odf_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/odf/odf_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (308/548) [MOC] tmp/src/gui/mrview/tool/view_moc.cpp (309/548) [CC] tmp/src/gui/mrview/tool/view_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/view_moc.cpp -o tmp/src/gui/mrview/tool/view_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/view_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (310/548) [CC] tmp/src/gui/mrview/sync/syncmanager.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ cmd/mrview.cpp -o tmp/cmd/mrview.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from cmd/mrview.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (311/548) [MOC] tmp/src/gui/dialog/image_properties_moc.cpp (312/548) [CC] tmp/src/gui/dialog/image_properties_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/sync/syncmanager.cpp -o tmp/src/gui/mrview/sync/syncmanager.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/gui/mrview/window.h:20, from src/gui/mrview/sync/syncmanager.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (313/548) [CC] tmp/src/gui/mrview/tool/connectome/edge.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/dialog/image_properties_moc.cpp -o tmp/src/gui/dialog/image_properties_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/dialog/image_properties_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (314/548) [MOC] tmp/src/gui/mrview/tool/overlay_moc.cpp (315/548) [CC] tmp/src/gui/mrview/tool/overlay_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/overlay_moc.cpp -o tmp/src/gui/mrview/tool/overlay_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/overlay_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (316/548) [CC] tmp/src/gui/mrview/tool/view.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/edge.cpp -o tmp/src/gui/mrview/tool/connectome/edge.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/gui/mrview/tool/connectome/edge.h:20, from src/gui/mrview/tool/connectome/edge.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (317/548) [CC] tmp/src/gui/mrview/adjust_button.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/adjust_button.cpp -o tmp/src/gui/mrview/adjust_button.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/adjust_button.h:20, from src/gui/mrview/adjust_button.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (318/548) [CC] tmp/src/gui/shapes/cube.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/view.cpp -o tmp/src/gui/mrview/tool/view.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/mrview/tool/base.h:20, from src/gui/mrview/tool/view.h:20, from src/gui/mrview/tool/view.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (319/548) [CC] tmp/src/gui/mrview/tool/fixel/base_fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/shapes/cube.cpp -o tmp/src/gui/shapes/cube.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/shapes/cube.h:20, from src/gui/shapes/cube.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (320/548) [CC] tmp/src/gui/mrview/tool/roi_editor/item.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/item.cpp -o tmp/src/gui/mrview/tool/roi_editor/item.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/iomanip:43, from src/gui/mrview/tool/roi_editor/item.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (321/548) [MOC] tmp/src/gui/mrview/tool/transform_moc.cpp (322/548) [CC] tmp/src/gui/mrview/tool/transform_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/base_fixel.cpp -o tmp/src/gui/mrview/tool/fixel/base_fixel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/unordered_map:36, from src/gui/mrview/tool/fixel/base_fixel.h:20, from src/gui/mrview/tool/fixel/base_fixel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (323/548) [CC] tmp/src/gui/mrview/gui_image.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/transform_moc.cpp -o tmp/src/gui/mrview/tool/transform_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/transform_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (324/548) [MOC] tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp (325/548) [CC] tmp/src/gui/mrview/tool/tractography/tractography_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp -o tmp/src/gui/mrview/tool/tractography/tractography_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/tractography/tractography_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (326/548) [CC] tmp/src/gui/mrview/sync/localsocketreader.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/gui_image.cpp -o tmp/src/gui/mrview/gui_image.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/gui/mrview/gui_image.h:20, from src/gui/mrview/gui_image.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (327/548) [CC] tmp/src/gui/mrview/tool/connectome/selection.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/sync/localsocketreader.cpp -o tmp/src/gui/mrview/sync/localsocketreader.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cerrno:46, from ./core/exception.h:20, from src/gui/mrview/sync/localsocketreader.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (328/548) [CC] tmp/src/gui/mrview/tool/odf/preview.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/selection.cpp -o tmp/src/gui/mrview/tool/connectome/selection.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/tool/connectome/selection.h:20, from src/gui/mrview/tool/connectome/selection.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (329/548) [CC] tmp/src/gui/mrview/tool/odf/odf.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/preview.cpp -o tmp/src/gui/mrview/tool/odf/preview.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from ./core/memory.h:20, from src/gui/dwi/render_frame.h:20, from src/gui/mrview/tool/odf/preview.h:20, from src/gui/mrview/tool/odf/preview.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (330/548) [CC] tmp/src/gui/dialog/image_properties.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/image_properties.cpp -o tmp/src/gui/dialog/image_properties.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/gui/dialog/image_properties.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (331/548) [CC] tmp/src/gui/mrview/sync/processlock.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/sync/processlock.cpp -o tmp/src/gui/mrview/sync/processlock.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtCore/qatomic.h:41, from /usr/include/qt5/QtCore/qrefcount.h:43, from /usr/include/qt5/QtCore/qbytearray.h:44, from /usr/include/qt5/QtCore/qcryptographichash.h:44, from /usr/include/qt5/QtCore/QCryptographicHash:1, from src/gui/mrview/sync/processlock.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (332/548) [CC] tmp/src/gui/mrview/tool/connectome/file_data_vector.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/file_data_vector.cpp -o tmp/src/gui/mrview/tool/connectome/file_data_vector.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtCore/qchar.h:43, from /usr/include/qt5/QtCore/qstring.h:49, from /usr/include/qt5/QtCore/QString:1, from src/gui/mrview/tool/connectome/file_data_vector.h:20, from src/gui/mrview/tool/connectome/file_data_vector.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (333/548) [MOC] tmp/src/gui/mrview/mode/lightbox_moc.cpp (334/548) [CC] tmp/src/gui/mrview/mode/lightbox_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/odf.cpp -o tmp/src/gui/mrview/tool/odf/odf.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/tool/odf/odf.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (335/548) [CC] tmp/src/gui/mrview/tool/transform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/mode/lightbox_moc.cpp -o tmp/src/gui/mrview/mode/lightbox_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/mode/lightbox_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (336/548) [MOC] tmp/src/gui/mrview/combo_box_error_moc.cpp (337/548) [CC] tmp/src/gui/mrview/combo_box_error_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/combo_box_error_moc.cpp -o tmp/src/gui/mrview/combo_box_error_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/combo_box_error_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (338/548) [CC] tmp/src/gui/mrview/tool/connectome/node.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/transform.cpp -o tmp/src/gui/mrview/tool/transform.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/mrview/tool/base.h:20, from src/gui/mrview/tool/transform.h:21, from src/gui/mrview/tool/transform.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (339/548) [MOC] tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp (340/548) [CC] tmp/src/gui/mrview/tool/connectome/connectome_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node.cpp -o tmp/src/gui/mrview/tool/connectome/node.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/gui/mrview/window.h:20, from src/gui/mrview/tool/connectome/node.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (341/548) [CC] tmp/src/gui/mrview/tool/fixel/legacy.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp -o tmp/src/gui/mrview/tool/connectome/connectome_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/connectome/connectome_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (342/548) [CC] tmp/src/gui/mrview/colourmap_button.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/colourmap_button.cpp -o tmp/src/gui/mrview/colourmap_button.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/random:36, from ./core/math/rng.h:20, from src/gui/mrview/colourmap_button.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (343/548) [CC] tmp/src/gui/mrview/combo_box_error.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/combo_box_error.cpp -o tmp/src/gui/mrview/combo_box_error.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/combo_box_error.h:20, from src/gui/mrview/combo_box_error.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (344/548) [MOC] tmp/src/gui/mrview/adjust_button_moc.cpp (345/548) [CC] tmp/src/gui/mrview/adjust_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/legacy.cpp -o tmp/src/gui/mrview/tool/fixel/legacy.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/unordered_map:36, from src/gui/mrview/tool/fixel/base_fixel.h:20, from src/gui/mrview/tool/fixel/legacy.h:20, from src/gui/mrview/tool/fixel/legacy.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (346/548) [CC] tmp/src/gui/mrview/window.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/adjust_button_moc.cpp -o tmp/src/gui/mrview/adjust_button_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/adjust_button_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (347/548) [CC] tmp/src/gui/mrview/displayable.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/displayable.cpp -o tmp/src/gui/mrview/displayable.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from ./core/math/math.h:20, from src/gui/mrview/displayable.h:20, from src/gui/mrview/displayable.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (348/548) [CC] tmp/src/gui/mrview/tool/overlay.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/window.cpp -o tmp/src/gui/mrview/window.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtCore/qalgorithms.h:43, from /usr/include/qt5/QtCore/qdebug.h:44, from /usr/include/qt5/QtCore/QDebug:1, from src/gui/mrview/window.cpp:16: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (349/548) [CC] tmp/src/gui/mrview/volume.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/overlay.cpp -o tmp/src/gui/mrview/tool/overlay.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/mrview/mode/base.h:20, from src/gui/mrview/tool/overlay.h:20, from src/gui/mrview/tool/overlay.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (350/548) [CC] tmp/src/gui/mrview/tool/connectome/colourmap_observers.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/volume.cpp -o tmp/src/gui/mrview/volume.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/gui/mrview/volume.h:20, from src/gui/mrview/volume.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (351/548) [CC] tmp/src/gui/mrview/tool/connectome/node_overlay.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/colourmap_observers.cpp -o tmp/src/gui/mrview/tool/connectome/colourmap_observers.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/mrview/colourmap_button.h:20, from src/gui/mrview/tool/connectome/colourmap_observers.h:20, from src/gui/mrview/tool/connectome/colourmap_observers.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (352/548) [CC] tmp/src/gui/mrview/tool/roi_editor/undoentry.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node_overlay.cpp -o tmp/src/gui/mrview/tool/connectome/node_overlay.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/gui/mrview/tool/connectome/node_overlay.h:20, from src/gui/mrview/tool/connectome/node_overlay.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (353/548) [CC] tmp/src/gui/mrview/tool/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/undoentry.cpp -o tmp/src/gui/mrview/tool/roi_editor/undoentry.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from src/gui/mrview/tool/roi_editor/undoentry.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (354/548) [MOC] tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp (355/548) [CC] tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp -o tmp/src/gui/mrview/sync/interprocesscommunicator_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/sync/interprocesscommunicator_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (356/548) [CC] tmp/src/gui/mrview/mode/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/base.cpp -o tmp/src/gui/mrview/tool/base.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/gui/mrview/tool/base.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (357/548) [CC] tmp/src/gui/mrview/tool/fixel/fixel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/mode/base.cpp -o tmp/src/gui/mrview/mode/base.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/mrview/mode/base.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (358/548) [CC] tmp/src/gui/mrview/file_open.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/fixel.cpp -o tmp/src/gui/mrview/tool/fixel/fixel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/file/config.h:20, from src/gui/mrview/tool/base.h:20, from src/gui/mrview/tool/fixel/fixel.h:20, from src/gui/mrview/tool/fixel/fixel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (359/548) [MOC] tmp/src/gui/mrview/mode/ortho_moc.cpp (360/548) [CC] tmp/src/gui/mrview/mode/ortho_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/file_open.cpp -o tmp/src/gui/mrview/file_open.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from src/gui/mrview/file_open.h:20, from src/gui/mrview/file_open.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (361/548) [CC] tmp/src/gui/mrview/tool/screen_capture.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/mode/ortho_moc.cpp -o tmp/src/gui/mrview/mode/ortho_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/mode/ortho_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (362/548) [CC] tmp/src/gui/cursor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/cursor.cpp -o tmp/src/gui/cursor.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/cursor.h:20, from src/gui/cursor.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (363/548) [CC] tmp/src/gui/mrview/tool/roi_editor/roi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/screen_capture.cpp -o tmp/src/gui/mrview/tool/screen_capture.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Geometry:11, from src/gui/mrview/tool/screen_capture.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (364/548) [MOC] tmp/src/gui/mrview/colourmap_button_moc.cpp (365/548) [CC] tmp/src/gui/mrview/colourmap_button_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/colourmap_button_moc.cpp -o tmp/src/gui/mrview/colourmap_button_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/colourmap_button_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (366/548) [MOC] tmp/src/gui/mrview/spin_box_moc.cpp (367/548) [CC] tmp/src/gui/mrview/spin_box_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/spin_box_moc.cpp -o tmp/src/gui/mrview/spin_box_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/spin_box_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (368/548) [CC] tmp/src/colourmap.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/colourmap.cpp -o tmp/src/colourmap.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from src/colourmap.h:20, from src/colourmap.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (369/548) [CC] tmp/src/gui/mrview/tool/connectome/matrix_list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/roi_editor/roi.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from src/gui/mrview/tool/roi_editor/roi.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (370/548) [CC] tmp/src/gui/mrview/mode/ortho.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/mode/ortho.cpp -o tmp/src/gui/mrview/mode/ortho.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/gui/mrview/mode/ortho.h:20, from src/gui/mrview/mode/ortho.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (371/548) [CC] tmp/src/gui/mrview/tool/connectome/connectome.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/matrix_list.cpp -o tmp/src/gui/mrview/tool/connectome/matrix_list.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/gui/mrview/tool/connectome/matrix_list.h:20, from src/gui/mrview/tool/connectome/matrix_list.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (372/548) [MOC] tmp/src/gui/mrview/tool/screen_capture_moc.cpp (373/548) [CC] tmp/src/gui/mrview/tool/screen_capture_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/screen_capture_moc.cpp -o tmp/src/gui/mrview/tool/screen_capture_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/screen_capture_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (374/548) [CC] tmp/src/gui/shapes/cylinder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/shapes/cylinder.cpp -o tmp/src/gui/shapes/cylinder.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/climits:46, from ./core/mrtrix.h:20, from src/gui/opengl/gl.h:20, from src/gui/shapes/cylinder.h:20, from src/gui/shapes/cylinder.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (375/548) [MOC] tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp (376/548) [CC] tmp/src/gui/mrview/tool/connectome/node_list_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp -o tmp/src/gui/mrview/tool/connectome/node_list_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/connectome/node_list_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (377/548) [CC] tmp/src/gui/mrview/mode/slice.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/connectome.cpp -o tmp/src/gui/mrview/tool/connectome/connectome.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from src/gui/mrview/tool/connectome/connectome.h:20, from src/gui/mrview/tool/connectome/connectome.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (378/548) [CC] tmp/src/surface/mesh_multi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/mesh_multi.cpp -o tmp/src/surface/mesh_multi.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Dense:1, from src/connectome/connectome.h:21, from src/surface/types.h:21, from src/surface/mesh_multi.h:21, from src/surface/mesh_multi.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (379/548) [CC] tmp/src/gui/mrview/tool/odf/item.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/mode/slice.cpp -o tmp/src/gui/mrview/mode/slice.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/gui/mrview/mode/slice.h:20, from src/gui/mrview/mode/slice.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (380/548) [CC] tmp/src/gui/mrview/tool/connectome/shaders.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/shaders.cpp -o tmp/src/gui/mrview/tool/connectome/shaders.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/gui/mrview/window.h:20, from src/gui/mrview/tool/connectome/shaders.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (381/548) [CC] tmp/src/gui/mrview/tool/fixel/image4D.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/odf/item.cpp -o tmp/src/gui/mrview/tool/odf/item.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/gui/mrview/tool/odf/item.h:20, from src/gui/mrview/tool/odf/item.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (382/548) [RCC] tmp/src/gui/mrview/icons.cpp /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/./build:746: DeprecationWarning: codecs.open() is deprecated. Use open() instead. with codecs.open (self.cmd[1], mode='w', encoding='utf-8') as fd: (383/548) [CC] tmp/src/gui/mrview/icons.o (384/548) [CC] tmp/src/gui/dialog/opengl.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/dialog/opengl.cpp -o tmp/src/gui/dialog/opengl.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/qt5/QtCore/qglobal.h:45, from /usr/include/qt5/QtGui/qtguiglobal.h:43, from /usr/include/qt5/QtWidgets/qtwidgetsglobal.h:43, from /usr/include/qt5/QtWidgets/qapplication.h:43, from /usr/include/qt5/QtWidgets/QApplication:1, from src/gui/gui.h:20, from src/gui/dialog/list.h:20, from src/gui/dialog/opengl.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (385/548) [MOC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp (386/548) [CC] tmp/src/gui/mrview/tool/roi_editor/roi_moc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/fixel/image4D.cpp -o tmp/src/gui/mrview/tool/fixel/image4D.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/unordered_map:36, from src/gui/mrview/tool/fixel/base_fixel.h:20, from src/gui/mrview/tool/fixel/image4D.h:20, from src/gui/mrview/tool/fixel/image4D.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (387/548) [CC] tmp/src/gui/mrview/tool/connectome/node_list.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp -o tmp/src/gui/mrview/tool/roi_editor/roi_moc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from tmp/src/gui/mrview/tool/roi_editor/roi_moc.cpp:9: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (388/548) [CC] tmp/cmd/mrtransform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE -DQT_OPENGL_LIB -DQT_SVG_LIB -DQT_WIDGETS_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_CORE_LIB -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtOpenGL -isystem /usr/include/qt5/QtSvg -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtNetwork -isystem /usr/include/qt5/QtCore -isystem /../lib64/qt5/mkspecs/linux-g++ src/gui/mrview/tool/connectome/node_list.cpp -o tmp/src/gui/mrview/tool/connectome/node_list.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/gui/mrview/tool/connectome/node_list.h:20, from src/gui/mrview/tool/connectome/node_list.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (389/548) [LB] bin/mrview (390/548) [CC] tmp/src/registration/multi_contrast.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/multi_contrast.cpp -o tmp/src/registration/multi_contrast.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/vector:62, from src/registration/multi_contrast.h:20, from src/registration/multi_contrast.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (391/548) [CC] tmp/cmd/mrthreshold.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrthreshold.cpp -o tmp/cmd/mrthreshold.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrthreshold.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (392/548) [LB] bin/mrthreshold (393/548) [CC] tmp/cmd/mrstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrstats.cpp -o tmp/cmd/mrstats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/iomanip:43, from cmd/mrstats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (394/548) [LB] bin/mrstats (395/548) [CC] tmp/src/registration/transform/affine.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrtransform.cpp -o tmp/cmd/mrtransform.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrtransform.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (396/548) [LB] bin/mrtransform (397/548) [CC] tmp/src/registration/linear.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/transform/affine.cpp -o tmp/src/registration/transform/affine.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/iterator:62, from src/registration/transform/affine.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (398/548) [CC] tmp/cmd/mrregister.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/linear.cpp -o tmp/src/registration/linear.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/iostream:40, from src/registration/linear.h:20, from src/registration/linear.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (399/548) [CC] tmp/src/registration/transform/rigid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/transform/rigid.cpp -o tmp/src/registration/transform/rigid.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/deque:62, from src/registration/transform/rigid.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (400/548) [CC] tmp/src/registration/nonlinear.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/nonlinear.cpp -o tmp/src/registration/nonlinear.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/registration/nonlinear.h:20, from src/registration/nonlinear.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (401/548) [CC] tmp/src/registration/transform/convergence_check.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/transform/convergence_check.cpp -o tmp/src/registration/transform/convergence_check.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/iterator:62, from src/registration/transform/convergence_check.h:17, from src/registration/transform/convergence_check.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (402/548) [CC] tmp/src/registration/transform/initialiser_helpers.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrregister.cpp -o tmp/cmd/mrregister.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrregister.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (403/548) [CC] tmp/src/registration/transform/initialiser.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/transform/initialiser.cpp -o tmp/src/registration/transform/initialiser.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/registration/transform/initialiser.h:20, from src/registration/transform/initialiser.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (404/548) [CC] tmp/cmd/mrmetric.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/registration/transform/initialiser_helpers.cpp -o tmp/src/registration/transform/initialiser_helpers.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Geometry:11, from src/registration/transform/initialiser_helpers.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (405/548) [LB] bin/mrregister g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrmetric.cpp -o tmp/cmd/mrmetric.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrmetric.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (406/548) [LB] bin/mrmetric (407/548) [CC] tmp/cmd/mrmath.o (408/548) [CC] tmp/cmd/mrinfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrinfo.cpp -o tmp/cmd/mrinfo.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from cmd/mrinfo.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (409/548) [LB] bin/mrinfo (410/548) [CC] tmp/cmd/mrhistogram.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrhistogram.cpp -o tmp/cmd/mrhistogram.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrhistogram.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (411/548) [LB] bin/mrhistogram (412/548) [CC] tmp/cmd/mrhistmatch.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrhistmatch.cpp -o tmp/cmd/mrhistmatch.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/stl_algobase.h:59, from /usr/include/c++/16/algorithm:62, from cmd/mrhistmatch.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (413/548) [LB] bin/mrhistmatch (414/548) [CC] tmp/cmd/mrgrid.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrmath.cpp -o tmp/cmd/mrmath.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from cmd/mrmath.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (415/548) [LB] bin/mrmath g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrgrid.cpp -o tmp/cmd/mrgrid.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from cmd/mrgrid.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (416/548) [LB] bin/mrgrid (417/548) [CC] tmp/cmd/mrfilter.o (418/548) [CC] tmp/cmd/mredit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mredit.cpp -o tmp/cmd/mredit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/set:62, from cmd/mredit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (419/548) [LB] bin/mredit (420/548) [CC] tmp/cmd/mrdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrfilter.cpp -o tmp/cmd/mrfilter.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/complex:46, from cmd/mrfilter.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (421/548) [LB] bin/mrfilter g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrdump.cpp -o tmp/cmd/mrdump.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrdump.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (422/548) [LB] bin/mrdump (423/548) [CC] tmp/cmd/mrdegibbs.o (424/548) [CC] tmp/cmd/mrconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrdegibbs.cpp -o tmp/cmd/mrdegibbs.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/complex:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/unsupported/Eigen/FFT:13, from cmd/mrdegibbs.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (425/548) [LB] bin/mrdegibbs (426/548) [CC] tmp/cmd/mrcolour.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrcolour.cpp -o tmp/cmd/mrcolour.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrcolour.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (427/548) [LB] bin/mrcolour (428/548) [CC] tmp/cmd/mrclusterstats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrclusterstats.cpp -o tmp/cmd/mrclusterstats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrclusterstats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/stats/tfce.h:24, from src/stats/cluster.h:23, from cmd/mrclusterstats.cpp:30: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (429/548) [CC] tmp/src/stats/tfce.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/stats/tfce.cpp -o tmp/src/stats/tfce.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/stack:62, from ./core/thread_queue.h:20, from src/stats/tfce.h:20, from src/stats/tfce.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/stats/tfce.h:24: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (430/548) [CC] tmp/src/stats/cluster.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrconvert.cpp -o tmp/cmd/mrconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/compare:40, from /usr/include/c++/16/array:40, from ./core/axes.h:21, from cmd/mrconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (431/548) [LB] bin/mrconvert g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/stats/cluster.cpp -o tmp/src/stats/cluster.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from ./core/filter/connected_components.h:21, from src/stats/cluster.h:20, from src/stats/cluster.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/stats/tfce.h:24, from src/stats/cluster.h:23: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (432/548) [LB] bin/mrclusterstats (433/548) [CC] tmp/cmd/mrcheckerboardmask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrcheckerboardmask.cpp -o tmp/cmd/mrcheckerboardmask.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from cmd/mrcheckerboardmask.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (434/548) [LB] bin/mrcheckerboardmask (435/548) [CC] tmp/cmd/mrcentroid.o (436/548) [CC] tmp/cmd/mrcat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrcentroid.cpp -o tmp/cmd/mrcentroid.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrcentroid.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (437/548) [LB] bin/mrcentroid (438/548) [CC] tmp/cmd/mrcalc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrcat.cpp -o tmp/cmd/mrcat.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrcat.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (439/548) [LB] bin/mrcat g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mrcalc.cpp -o tmp/cmd/mrcalc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mrcalc.cpp:182: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (440/548) [LB] bin/mrcalc (441/548) [CC] tmp/cmd/mraverageheader.o (442/548) [CC] tmp/cmd/meshfilter.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/meshfilter.cpp -o tmp/cmd/meshfilter.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/meshfilter.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (443/548) [CC] tmp/src/surface/filter/smooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/filter/smooth.cpp -o tmp/src/surface/filter/smooth.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from src/surface/mesh.h:21, from src/surface/filter/smooth.h:20, from src/surface/filter/smooth.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (444/548) [CC] tmp/src/surface/filter/base.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/filter/base.cpp -o tmp/src/surface/filter/base.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/string:40, from ./core/progressbar.h:20, from src/surface/filter/base.h:20, from src/surface/filter/base.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (445/548) [LB] bin/meshfilter (446/548) [CC] tmp/cmd/meshconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/meshconvert.cpp -o tmp/cmd/meshconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/meshconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (447/548) [CC] tmp/src/surface/filter/vertex_transform.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mraverageheader.cpp -o tmp/cmd/mraverageheader.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mraverageheader.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (448/548) [LB] bin/mraverageheader g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/filter/vertex_transform.cpp -o tmp/src/surface/filter/vertex_transform.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/surface/filter/vertex_transform.h:20, from src/surface/filter/vertex_transform.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (449/548) [LB] bin/meshconvert (450/548) [CC] tmp/src/surface/algo/mesh2image.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/surface/algo/mesh2image.cpp -o tmp/src/surface/algo/mesh2image.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/surface/algo/mesh2image.h:21, from src/surface/algo/mesh2image.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (451/548) [CC] tmp/cmd/mesh2voxel.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/mesh2voxel.cpp -o tmp/cmd/mesh2voxel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/mesh2voxel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (452/548) [LB] bin/mesh2voxel (453/548) [CC] tmp/cmd/maskfilter.o (454/548) [CC] tmp/cmd/maskdump.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/maskdump.cpp -o tmp/cmd/maskdump.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/maskdump.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (455/548) [LB] bin/maskdump g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/maskfilter.cpp -o tmp/cmd/maskfilter.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/maskfilter.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (456/548) [LB] bin/maskfilter (457/548) [CC] tmp/cmd/labelstats.o (458/548) [CC] tmp/cmd/labelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/labelstats.cpp -o tmp/cmd/labelstats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/labelstats.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (459/548) [LB] bin/labelstats (460/548) [CC] tmp/cmd/label2mesh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/labelconvert.cpp -o tmp/cmd/labelconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/labelconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (461/548) [LB] bin/labelconvert (462/548) [CC] tmp/cmd/label2colour.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/label2mesh.cpp -o tmp/cmd/label2mesh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/mutex:36, from cmd/label2mesh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (463/548) [LB] bin/label2mesh g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/label2colour.cpp -o tmp/cmd/label2colour.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from cmd/label2colour.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (464/548) [LB] bin/label2colour (465/548) [CC] tmp/cmd/fod2fixel.o (466/548) [CC] tmp/cmd/fod2dec.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fod2fixel.cpp -o tmp/cmd/fod2fixel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fod2fixel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (467/548) [LB] bin/fod2fixel g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fod2dec.cpp -o tmp/cmd/fod2dec.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/sstream:40, from cmd/fod2dec.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (468/548) [LB] bin/fod2dec (469/548) [CC] tmp/cmd/fixelreorient.o (470/548) [CC] tmp/src/fixel/filter/smooth.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelreorient.cpp -o tmp/cmd/fixelreorient.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelreorient.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (471/548) [LB] bin/fixelreorient g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/fixel/filter/smooth.cpp -o tmp/src/fixel/filter/smooth.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/fixel/matrix.h:21, from src/fixel/filter/smooth.h:21, from src/fixel/filter/smooth.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (472/548) [CC] tmp/cmd/fixelfilter.o (473/548) [CC] tmp/src/fixel/matrix.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelfilter.cpp -o tmp/cmd/fixelfilter.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelfilter.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (474/548) [CC] tmp/src/fixel/filter/connect.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/fixel/filter/connect.cpp -o tmp/src/fixel/filter/connect.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/fixel/filter/connect.h:21, from src/fixel/filter/connect.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (475/548) [CC] tmp/src/stats/cfe.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/fixel/matrix.cpp -o tmp/src/fixel/matrix.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/functional:50, from ./core/image.h:20, from src/fixel/matrix.h:21, from src/fixel/matrix.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (476/548) [CC] tmp/src/fixel/index_remapper.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/fixel/index_remapper.cpp -o tmp/src/fixel/index_remapper.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/limits:49, from src/fixel/index_remapper.h:21, from src/fixel/index_remapper.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (477/548) [CC] tmp/cmd/fixelcrop.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/stats/cfe.cpp -o tmp/src/stats/cfe.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/cstdint:40, from /usr/include/c++/16/cinttypes:40, from ./core/types.h:20, from src/stats/cfe.h:20, from src/stats/cfe.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (478/548) [LB] bin/fixelfilter g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelcrop.cpp -o tmp/cmd/fixelcrop.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelcrop.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (479/548) [LB] bin/fixelcrop (480/548) [CC] tmp/cmd/fixelcorrespondence.o (481/548) [CC] tmp/cmd/fixelconvert.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelcorrespondence.cpp -o tmp/cmd/fixelcorrespondence.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelcorrespondence.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (482/548) [LB] bin/fixelcorrespondence g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelconvert.cpp -o tmp/cmd/fixelconvert.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelconvert.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (483/548) [LB] bin/fixelconvert (484/548) [CC] tmp/cmd/fixelconnectivity.o (485/548) [CC] tmp/cmd/fixelcfestats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelconnectivity.cpp -o tmp/cmd/fixelconnectivity.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelconnectivity.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (486/548) [LB] bin/fixelconnectivity g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixelcfestats.cpp -o tmp/cmd/fixelcfestats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixelcfestats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (487/548) [LB] bin/fixelcfestats (488/548) [CC] tmp/cmd/fixel2voxel.o (489/548) [CC] tmp/cmd/fixel2tsf.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixel2voxel.cpp -o tmp/cmd/fixel2voxel.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/type_traits:40, from /usr/include/c++/16/bits/stl_pair.h:60, from /usr/include/c++/16/tuple:40, from ./core/apply.h:20, from cmd/fixel2voxel.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (490/548) [LB] bin/fixel2voxel (491/548) [CC] tmp/cmd/fixel2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixel2tsf.cpp -o tmp/cmd/fixel2tsf.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixel2tsf.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (492/548) [LB] bin/fixel2tsf g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixel2sh.cpp -o tmp/cmd/fixel2sh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixel2sh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (493/548) [LB] bin/fixel2sh (494/548) [CC] tmp/cmd/fixel2peaks.o (495/548) [CC] tmp/cmd/dwiextract.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/fixel2peaks.cpp -o tmp/cmd/fixel2peaks.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/fixel2peaks.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (496/548) [LB] bin/fixel2peaks (497/548) [CC] tmp/cmd/dwidenoise.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dwiextract.cpp -o tmp/cmd/dwiextract.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwiextract.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (498/548) [LB] bin/dwiextract (499/548) [CC] tmp/cmd/dwi2tensor.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dwi2tensor.cpp -o tmp/cmd/dwi2tensor.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwi2tensor.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (500/548) [LB] bin/dwi2tensor (501/548) [CC] tmp/cmd/dwi2mask.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dwi2mask.cpp -o tmp/cmd/dwi2mask.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwi2mask.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (502/548) [LB] bin/dwi2mask (503/548) [CC] tmp/cmd/dwi2fod.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dwidenoise.cpp -o tmp/cmd/dwidenoise.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwidenoise.cpp:18: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (504/548) [LB] bin/dwidenoise g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dwi2fod.cpp -o tmp/cmd/dwi2fod.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwi2fod.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (505/548) [CC] tmp/src/dwi/sdeconv/msmt_csd.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/sdeconv/msmt_csd.cpp -o tmp/src/dwi/sdeconv/msmt_csd.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/map:62, from ./core/header.h:20, from src/dwi/sdeconv/msmt_csd.h:20, from src/dwi/sdeconv/msmt_csd.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (506/548) [CC] tmp/src/dwi/sdeconv/csd.o (507/548) [CC] tmp/cmd/dwi2adc.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/sdeconv/csd.cpp -o tmp/src/dwi/sdeconv/csd.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from src/dwi/sdeconv/csd.h:20, from src/dwi/sdeconv/csd.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (508/548) [LB] bin/dwi2fod (509/548) [CC] tmp/cmd/dirstat.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dwi2adc.cpp -o tmp/cmd/dwi2adc.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dwi2adc.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (510/548) [LB] bin/dwi2adc (511/548) [CC] tmp/cmd/dirsplit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dirsplit.cpp -o tmp/cmd/dirsplit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dirsplit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (512/548) [LB] bin/dirsplit (513/548) [CC] tmp/cmd/dirorder.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dirstat.cpp -o tmp/cmd/dirstat.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dirstat.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (514/548) [LB] bin/dirstat (515/548) [CC] tmp/cmd/dirmerge.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dirmerge.cpp -o tmp/cmd/dirmerge.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dirmerge.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (516/548) [LB] bin/dirmerge (517/548) [CC] tmp/cmd/dirgen.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dirorder.cpp -o tmp/cmd/dirorder.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dirorder.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (518/548) [LB] bin/dirorder g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dirgen.cpp -o tmp/cmd/dirgen.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dirgen.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (519/548) [LB] bin/dirgen (520/548) [CC] tmp/cmd/dirflip.o (521/548) [CC] tmp/cmd/dcminfo.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dcminfo.cpp -o tmp/cmd/dcminfo.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dcminfo.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (522/548) [LB] bin/dcminfo (523/548) [CC] tmp/cmd/dcmedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dirflip.cpp -o tmp/cmd/dirflip.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dirflip.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (524/548) [LB] bin/dirflip (525/548) [CC] tmp/cmd/connectomestats.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/dcmedit.cpp -o tmp/cmd/dcmedit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/dcmedit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (526/548) [LB] bin/dcmedit (527/548) [CC] tmp/src/connectome/enhance.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/connectome/enhance.cpp -o tmp/src/connectome/enhance.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/memoryfwd.h:50, from /usr/include/c++/16/memory:65, from src/connectome/enhance.h:20, from src/connectome/enhance.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/connectome/enhance.h:26: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (528/548) [CC] tmp/cmd/connectomeedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/connectomestats.cpp -o tmp/cmd/connectomestats.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/connectomestats.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/connectome/enhance.h:26, from cmd/connectomestats.cpp:28: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (529/548) [LB] bin/connectomestats g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/connectomeedit.cpp -o tmp/cmd/connectomeedit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/connectomeedit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/connectome/enhance.h:26, from cmd/connectomeedit.cpp:18: src/stats/enhance.h:49:22: warning: ‘virtual void MR::Stats::EnhancerBase::operator()(in_column_type, out_column_type) const’ was hidden [-Woverloaded-virtual=] 49 | virtual void operator() (in_column_type, out_column_type) const = 0; | ^~~~~~~~ In file included from src/connectome/enhance.h:27: src/stats/tfce.h:51:24: note: by ‘virtual void MR::Stats::TFCE::EnhancerBase::operator()(MR::Stats::EnhancerBase::in_column_type, MR::Stats::TFCE::value_type, MR::Stats::EnhancerBase::out_column_type) const’ 51 | virtual void operator() (in_column_type /*input_statistics*/, const value_type /*threshold*/, out_column_type /*enhanced_statistics*/) const = 0; | ^~~~~~~~ (530/548) [LB] bin/connectomeedit (531/548) [CC] tmp/src/dwi/tractography/connectome/extract.o (532/548) [CC] tmp/cmd/connectome2tck.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/extract.cpp -o tmp/src/dwi/tractography/connectome/extract.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/fstream:40, from ./core/file/ofstream.h:21, from src/dwi/tractography/connectome/extract.h:21, from src/dwi/tractography/connectome/extract.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (533/548) [CC] tmp/src/dwi/tractography/connectome/exemplar.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE src/dwi/tractography/connectome/exemplar.cpp -o tmp/src/dwi/tractography/connectome/exemplar.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/mutex:36, from src/dwi/tractography/connectome/exemplar.h:20, from src/dwi/tractography/connectome/exemplar.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (534/548) [CC] tmp/cmd/amp2sh.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/connectome2tck.cpp -o tmp/cmd/connectome2tck.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/sstream:40, from cmd/connectome2tck.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (535/548) [LB] bin/connectome2tck (536/548) [CC] tmp/cmd/amp2response.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/amp2sh.cpp -o tmp/cmd/amp2sh.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/amp2sh.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (537/548) [LB] bin/amp2sh g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/amp2response.cpp -o tmp/cmd/amp2response.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/requires_hosted.h:31, from /usr/include/c++/16/cmath:46, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/src/Core/util/Macros.h:679, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Core:19, from /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0/Eigen/Dense:1, from cmd/amp2response.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (538/548) [LB] bin/amp2response (539/548) [CC] tmp/cmd/afdconnectivity.o (540/548) [CC] tmp/cmd/5ttedit.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/5ttedit.cpp -o tmp/cmd/5ttedit.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/5ttedit.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (541/548) [LB] bin/5ttedit (542/548) [CC] tmp/cmd/5ttcheck.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/afdconnectivity.cpp -o tmp/cmd/afdconnectivity.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/afdconnectivity.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:21, from cmd/afdconnectivity.cpp:26: src/dwi/tractography/mapping/fixel_td_map.h: In instantiation of ‘class MR::DWI::Tractography::Mapping::Fixel_TD_map’: src/dwi/tractography/SIFT/model_base.h:124:15: required from ‘class MR::DWI::Tractography::SIFT::ModelBase’ 124 | class ModelBase : public Mapping::Fixel_TD_map | ^~~~~~~~~ cmd/afdconnectivity.cpp:123:57: required from here 123 | class AFDConnectivity : public DWI::Tractography::SIFT::ModelBase | ^~~~~~~~~~~~~~~~ src/dwi/fixel_map.h:187:10: warning: ‘bool MR::DWI::Fixel_map::operator()(const MR::DWI::FMLS::FOD_lobes&) [with Fixel = Fixel]’ was hidden [-Woverloaded-virtual=] 187 | bool Fixel_map::operator() (const FMLS::FOD_lobes& in) | ^~~~~~~~~~~~~~~~ In file included from src/dwi/tractography/SIFT/model_base.h:30: src/dwi/tractography/mapping/fixel_td_map.h:70:14: note: by ‘bool MR::DWI::Tractography::Mapping::Fixel_TD_map::operator()(const MR::DWI::Tractography::Mapping::SetDixel&) [with Fixel = Fixel]’ 70 | bool Fixel_TD_map::operator() (const SetDixel& in) | ^~~~~~~~~~~~~~~~~~~ (543/548) [LB] bin/afdconnectivity g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/5ttcheck.cpp -o tmp/cmd/5ttcheck.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from cmd/5ttcheck.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (544/548) [LB] bin/5ttcheck (545/548) [CC] tmp/cmd/5tt2vis.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/5tt2vis.cpp -o tmp/cmd/5tt2vis.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/5tt2vis.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (546/548) [LB] bin/5tt2vis (547/548) [CC] tmp/cmd/5tt2gmwmi.o g++ -c -std=c++11 -DMRTRIX_BUILD_TYPE="debug version with nooptim" -pthread -fPIC -march=native -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DMRTRIX_WORD64 -DMRTRIX_HAVE_EIGEN_UNSUPPORTED_SPECIAL_FUNCTIONS -DWITH_GZFILEOP -DMRTRIX_TIFF_SUPPORT -isystem /usr/include/webp -DWITH_GZFILEOP -DMRTRIX_PNG_SUPPORT -isystem /usr/include/libpng16 -DWITH_GZFILEOP -DEIGEN_FFTW_DEFAULT -Wall -g -O0 -Isrc -I./core -Icmd -isystem /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/.eigen-3.4.0 -DEIGEN_DONT_PARALLELIZE cmd/5tt2gmwmi.cpp -o tmp/cmd/5tt2gmwmi.o: In file included from /usr/include/c++/16/x86_64-redhat-linux/bits/os_defines.h:39, from /usr/include/c++/16/x86_64-redhat-linux/bits/c++config.h:2677, from /usr/include/c++/16/bits/version.h:51, from /usr/include/c++/16/cstring:47, from ./core/app.h:20, from ./core/command.h:25, from cmd/5tt2gmwmi.cpp:17: /usr/include/features.h:451:4: warning: #warning _FORTIFY_SOURCE requires compiling with optimization (-O) [-Wcpp] 451 | # warning _FORTIFY_SOURCE requires compiling with optimization (-O) | ^~~~~~~ (548/548) [LB] bin/5tt2gmwmi + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.gfC0qY + umask 022 + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + '[' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT ++ dirname /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT + mkdir -p /builddir/build/BUILD/mrtrix3-3.0.8-build + mkdir /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=x86-64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -mtls-dialect=gnu2 -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-hardened-ld-errors -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd mrtrix3-3.0.8 + mkdir -p /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3 + mkdir -p /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin + cp -a bin /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/ + cp -a lib /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/ + cp -a share /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/ + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5tt2gmwmi + binary_name=5tt2gmwmi + '[' 5tt2gmwmi '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/5tt2gmwmi /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/5tt2gmwmi + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5tt2vis + binary_name=5tt2vis + '[' 5tt2vis '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/5tt2vis /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/5tt2vis + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttcheck + binary_name=5ttcheck + '[' 5ttcheck '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/5ttcheck /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/5ttcheck + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttedit + binary_name=5ttedit + '[' 5ttedit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/5ttedit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/5ttedit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttgen + binary_name=5ttgen + '[' 5ttgen '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/5ttgen /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/5ttgen + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/afdconnectivity + binary_name=afdconnectivity + '[' afdconnectivity '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/afdconnectivity /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/afdconnectivity + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/amp2response + binary_name=amp2response + '[' amp2response '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/amp2response /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/amp2response + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/amp2sh + binary_name=amp2sh + '[' amp2sh '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/amp2sh /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/amp2sh + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/blend + binary_name=blend + '[' blend '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/blend /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/blend + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectome2tck + binary_name=connectome2tck + '[' connectome2tck '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/connectome2tck /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/connectome2tck + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectomeedit + binary_name=connectomeedit + '[' connectomeedit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/connectomeedit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/connectomeedit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectomestats + binary_name=connectomestats + '[' connectomestats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/connectomestats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/connectomestats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/convert_bruker + binary_name=convert_bruker + '[' convert_bruker '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/convert_bruker /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/convert_bruker + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dcmedit + binary_name=dcmedit + '[' dcmedit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dcmedit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dcmedit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dcminfo + binary_name=dcminfo + '[' dcminfo '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dcminfo /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dcminfo + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirflip + binary_name=dirflip + '[' dirflip '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dirflip /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dirflip + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirgen + binary_name=dirgen + '[' dirgen '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dirgen /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dirgen + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirmerge + binary_name=dirmerge + '[' dirmerge '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dirmerge /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dirmerge + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirorder + binary_name=dirorder + '[' dirorder '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dirorder /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dirorder + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirsplit + binary_name=dirsplit + '[' dirsplit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dirsplit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dirsplit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirstat + binary_name=dirstat + '[' dirstat '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dirstat /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dirstat + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2adc + binary_name=dwi2adc + '[' dwi2adc '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwi2adc /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwi2adc + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2fod + binary_name=dwi2fod + '[' dwi2fod '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwi2fod /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwi2fod + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2mask + binary_name=dwi2mask + '[' dwi2mask '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwi2mask /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwi2mask + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2response + binary_name=dwi2response + '[' dwi2response '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwi2response /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwi2response + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2tensor + binary_name=dwi2tensor + '[' dwi2tensor '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwi2tensor /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwi2tensor + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwibiascorrect + binary_name=dwibiascorrect + '[' dwibiascorrect '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwibiascorrect /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwibiascorrect + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwicat + binary_name=dwicat + '[' dwicat '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwicat /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwicat + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwidenoise + binary_name=dwidenoise + '[' dwidenoise '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwidenoise /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwidenoise + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwiextract + binary_name=dwiextract + '[' dwiextract '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwiextract /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwiextract + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwifslpreproc + binary_name=dwifslpreproc + '[' dwifslpreproc '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwifslpreproc /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwifslpreproc + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwigradcheck + binary_name=dwigradcheck + '[' dwigradcheck '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwigradcheck /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwigradcheck + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwinormalise + binary_name=dwinormalise + '[' dwinormalise '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwinormalise /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwinormalise + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwishellmath + binary_name=dwishellmath + '[' dwishellmath '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/dwishellmath /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/dwishellmath + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2peaks + binary_name=fixel2peaks + '[' fixel2peaks '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixel2peaks /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixel2peaks + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2sh + binary_name=fixel2sh + '[' fixel2sh '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixel2sh /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixel2sh + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2tsf + binary_name=fixel2tsf + '[' fixel2tsf '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixel2tsf /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixel2tsf + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2voxel + binary_name=fixel2voxel + '[' fixel2voxel '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixel2voxel /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixel2voxel + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcfestats + binary_name=fixelcfestats + '[' fixelcfestats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelcfestats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelcfestats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelconnectivity + binary_name=fixelconnectivity + '[' fixelconnectivity '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelconnectivity /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelconnectivity + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelconvert + binary_name=fixelconvert + '[' fixelconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcorrespondence + binary_name=fixelcorrespondence + '[' fixelcorrespondence '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelcorrespondence /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelcorrespondence + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcrop + binary_name=fixelcrop + '[' fixelcrop '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelcrop /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelcrop + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelfilter + binary_name=fixelfilter + '[' fixelfilter '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelfilter /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelfilter + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelreorient + binary_name=fixelreorient + '[' fixelreorient '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fixelreorient /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fixelreorient + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fod2dec + binary_name=fod2dec + '[' fod2dec '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fod2dec /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fod2dec + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fod2fixel + binary_name=fod2fixel + '[' fod2fixel '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/fod2fixel /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/fod2fixel + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/for_each + binary_name=for_each + '[' for_each '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/for_each /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/for_each + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/gen_scheme + binary_name=gen_scheme + '[' gen_scheme '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/gen_scheme /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/gen_scheme + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/label2colour + binary_name=label2colour + '[' label2colour '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/label2colour /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/label2colour + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/label2mesh + binary_name=label2mesh + '[' label2mesh '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/label2mesh /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/label2mesh + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelconvert + binary_name=labelconvert + '[' labelconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/labelconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/labelconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelsgmfix + binary_name=labelsgmfix + '[' labelsgmfix '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/labelsgmfix /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/labelsgmfix + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelstats + binary_name=labelstats + '[' labelstats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/labelstats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/labelstats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/maskdump + binary_name=maskdump + '[' maskdump '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/maskdump /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/maskdump + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/maskfilter + binary_name=maskfilter + '[' maskfilter '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/maskfilter /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/maskfilter + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mesh2voxel + binary_name=mesh2voxel + '[' mesh2voxel '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mesh2voxel /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mesh2voxel + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/meshconvert + binary_name=meshconvert + '[' meshconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/meshconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/meshconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/meshfilter + binary_name=meshfilter + '[' meshfilter '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/meshfilter /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/meshfilter + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mraverageheader + binary_name=mraverageheader + '[' mraverageheader '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mraverageheader /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mraverageheader + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcalc + binary_name=mrcalc + '[' mrcalc '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrcalc /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrcalc + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcat + binary_name=mrcat + '[' mrcat '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrcat /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrcat + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcentroid + binary_name=mrcentroid + '[' mrcentroid '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrcentroid /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrcentroid + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcheckerboardmask + binary_name=mrcheckerboardmask + '[' mrcheckerboardmask '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrcheckerboardmask /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrcheckerboardmask + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrclusterstats + binary_name=mrclusterstats + '[' mrclusterstats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrclusterstats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrclusterstats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcolour + binary_name=mrcolour + '[' mrcolour '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrcolour /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrcolour + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrconvert + binary_name=mrconvert + '[' mrconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrdegibbs + binary_name=mrdegibbs + '[' mrdegibbs '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrdegibbs /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrdegibbs + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrdump + binary_name=mrdump + '[' mrdump '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrdump /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrdump + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mredit + binary_name=mredit + '[' mredit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mredit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mredit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrfilter + binary_name=mrfilter + '[' mrfilter '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrfilter /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrfilter + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrgrid + binary_name=mrgrid + '[' mrgrid '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrgrid /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrgrid + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrhistmatch + binary_name=mrhistmatch + '[' mrhistmatch '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrhistmatch /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrhistmatch + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrhistogram + binary_name=mrhistogram + '[' mrhistogram '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrhistogram /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrhistogram + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrinfo + binary_name=mrinfo + '[' mrinfo '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrinfo /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrinfo + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrmath + binary_name=mrmath + '[' mrmath '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrmath /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrmath + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrmetric + binary_name=mrmetric + '[' mrmetric '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrmetric /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrmetric + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrregister + binary_name=mrregister + '[' mrregister '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrregister /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrregister + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrstats + binary_name=mrstats + '[' mrstats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrstats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrstats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrthreshold + binary_name=mrthreshold + '[' mrthreshold '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrthreshold /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrthreshold + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtransform + binary_name=mrtransform + '[' mrtransform '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrtransform /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrtransform + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix3.py + binary_name=mrtrix3.py + '[' mrtrix3.py '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrtrix3.py /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrtrix3.py + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix_cleanup + binary_name=mrtrix_cleanup + '[' mrtrix_cleanup '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrtrix_cleanup /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrtrix_cleanup + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrview + binary_name=mrview + '[' mrview '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mrview /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mrview + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mtnormalise + binary_name=mtnormalise + '[' mtnormalise '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/mtnormalise /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/mtnormalise + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/notfound + binary_name=notfound + '[' notfound '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/notfound /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/notfound + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/peaks2amp + binary_name=peaks2amp + '[' peaks2amp '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/peaks2amp /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/peaks2amp + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/peaks2fixel + binary_name=peaks2fixel + '[' peaks2fixel '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/peaks2fixel /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/peaks2fixel + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/population_template + binary_name=population_template + '[' population_template '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/population_template /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/population_template + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/responsemean + binary_name=responsemean + '[' responsemean '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/responsemean /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/responsemean + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2amp + binary_name=sh2amp + '[' sh2amp '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/sh2amp /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/sh2amp + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2peaks + binary_name=sh2peaks + '[' sh2peaks '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/sh2peaks /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/sh2peaks + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2power + binary_name=sh2power + '[' sh2power '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/sh2power /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/sh2power + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2response + binary_name=sh2response + '[' sh2response '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/sh2response /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/sh2response + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shbasis + binary_name=shbasis + '[' shbasis '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/shbasis /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/shbasis + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shconv + binary_name=shconv + '[' shconv '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/shconv /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/shconv + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shview + binary_name=shview + '[' shview '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/shview /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/shview + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tck2connectome + binary_name=tck2connectome + '[' tck2connectome '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tck2connectome /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tck2connectome + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tck2fixel + binary_name=tck2fixel + '[' tck2fixel '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tck2fixel /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tck2fixel + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckconvert + binary_name=tckconvert + '[' tckconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckdfc + binary_name=tckdfc + '[' tckdfc '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckdfc /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckdfc + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckedit + binary_name=tckedit + '[' tckedit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckedit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckedit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckgen + binary_name=tckgen + '[' tckgen '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckgen /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckgen + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckglobal + binary_name=tckglobal + '[' tckglobal '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckglobal /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckglobal + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckinfo + binary_name=tckinfo + '[' tckinfo '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckinfo /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckinfo + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckmap + binary_name=tckmap + '[' tckmap '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckmap /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckmap + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckresample + binary_name=tckresample + '[' tckresample '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckresample /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckresample + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksample + binary_name=tcksample + '[' tcksample '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tcksample /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tcksample + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksift + binary_name=tcksift + '[' tcksift '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tcksift /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tcksift + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksift2 + binary_name=tcksift2 + '[' tcksift2 '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tcksift2 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tcksift2 + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckstats + binary_name=tckstats + '[' tckstats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tckstats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tckstats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcktransform + binary_name=tcktransform + '[' tcktransform '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tcktransform /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tcktransform + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tensor2metric + binary_name=tensor2metric + '[' tensor2metric '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tensor2metric /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tensor2metric + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformcalc + binary_name=transformcalc + '[' transformcalc '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/transformcalc /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/transformcalc + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformcompose + binary_name=transformcompose + '[' transformcompose '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/transformcompose /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/transformcompose + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformconvert + binary_name=transformconvert + '[' transformconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/transformconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/transformconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfdivide + binary_name=tsfdivide + '[' tsfdivide '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tsfdivide /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tsfdivide + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfinfo + binary_name=tsfinfo + '[' tsfinfo '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tsfinfo /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tsfinfo + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfmult + binary_name=tsfmult + '[' tsfmult '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tsfmult /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tsfmult + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfsmooth + binary_name=tsfsmooth + '[' tsfsmooth '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tsfsmooth /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tsfsmooth + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfthreshold + binary_name=tsfthreshold + '[' tsfthreshold '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tsfthreshold /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tsfthreshold + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfvalidate + binary_name=tsfvalidate + '[' tsfvalidate '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/tsfvalidate /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/tsfvalidate + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/vectorstats + binary_name=vectorstats + '[' vectorstats '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/vectorstats /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/vectorstats + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/voxel2fixel + binary_name=voxel2fixel + '[' voxel2fixel '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/voxel2fixel /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/voxel2fixel + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/voxel2mesh + binary_name=voxel2mesh + '[' voxel2mesh '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/voxel2mesh /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/voxel2mesh + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warp2metric + binary_name=warp2metric + '[' warp2metric '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/warp2metric /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/warp2metric + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpconvert + binary_name=warpconvert + '[' warpconvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/warpconvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/warpconvert + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpcorrect + binary_name=warpcorrect + '[' warpcorrect '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/warpcorrect /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/warpcorrect + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpinit + binary_name=warpinit + '[' warpinit '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/warpinit /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/warpinit + for b in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* ++ basename /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpinvert + binary_name=warpinvert + '[' warpinvert '!=' python ']' + ln -s /usr/lib64/mrtrix3/bin/warpinvert /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/bin/warpinvert + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5tt2gmwmi ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5tt2gmwmi + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5tt2vis ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5tt2vis + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttcheck ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttcheck + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttedit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttedit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttgen ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttgen + grep -q python + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttgen' Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttgen + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/5ttgen + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/afdconnectivity ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/afdconnectivity + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/amp2response ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/amp2response + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/amp2sh ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/amp2sh + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/blend ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/blend + grep -q python + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/blend' Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/blend + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/blend + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectome2tck ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectome2tck + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectomeedit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectomeedit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectomestats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/connectomestats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/convert_bruker ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/convert_bruker + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/convert_bruker + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/convert_bruker' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/convert_bruker + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dcmedit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dcmedit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dcminfo ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dcminfo + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirflip ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirflip + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirgen ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirgen + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirmerge ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirmerge + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirorder ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirorder + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirsplit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirsplit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirstat ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dirstat + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2adc ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2adc + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2fod ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2fod + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2mask ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2mask + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2response ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2response + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2response + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2response' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2response + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2tensor ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwi2tensor + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwibiascorrect ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwibiascorrect + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwibiascorrect + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwibiascorrect' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwibiascorrect + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwicat ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwicat + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwicat + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwicat' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwicat + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwidenoise ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwidenoise + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwiextract ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwiextract + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwifslpreproc ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwifslpreproc + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwifslpreproc + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwifslpreproc' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwifslpreproc + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwigradcheck ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwigradcheck + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwigradcheck + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwigradcheck' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwigradcheck + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwinormalise ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwinormalise + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwinormalise + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwinormalise' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwinormalise + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwishellmath ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwishellmath + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwishellmath + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwishellmath' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/dwishellmath + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2peaks ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2peaks + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2sh ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2sh + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2tsf ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2tsf + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2voxel ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixel2voxel + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcfestats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcfestats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelconnectivity ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelconnectivity + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcorrespondence ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcorrespondence + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcrop ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelcrop + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelfilter ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelfilter + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelreorient ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fixelreorient + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fod2dec ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fod2dec + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fod2fixel ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/fod2fixel + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/for_each ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/for_each Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/for_each + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/for_each' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/for_each + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/gen_scheme ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/gen_scheme + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/label2colour ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/label2colour + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/label2mesh ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/label2mesh + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelsgmfix ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelsgmfix + grep -q python + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelsgmfix' Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelsgmfix + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelsgmfix + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelstats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/labelstats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/maskdump ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/maskdump + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/maskfilter ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/maskfilter + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mesh2voxel ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mesh2voxel + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/meshconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/meshconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/meshfilter ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/meshfilter + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mraverageheader ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mraverageheader + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcalc ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcalc + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcat ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcat + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcentroid ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcentroid + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcheckerboardmask ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcheckerboardmask + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrclusterstats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrclusterstats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcolour ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrcolour + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrdegibbs ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrdegibbs + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrdump ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrdump + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mredit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mredit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrfilter ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrfilter + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrgrid ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrgrid + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrhistmatch ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrhistmatch + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrhistogram ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrhistogram + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrinfo ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrinfo + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrmath ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrmath + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrmetric ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrmetric + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrregister ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrregister + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrstats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrstats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrthreshold ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrthreshold + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtransform ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtransform + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix3.py ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix3.py + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix_cleanup ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix_cleanup + grep -q python + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix_cleanup' Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix_cleanup + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrtrix_cleanup + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrview ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mrview + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mtnormalise ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/mtnormalise + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/notfound ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/notfound + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/peaks2amp ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/peaks2amp + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/peaks2fixel ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/peaks2fixel + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/population_template ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/population_template + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/population_template + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/population_template' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/population_template + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/responsemean ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/responsemean + grep -q python Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/responsemean + echo 'Fixing shebang in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/responsemean' + sed -i '1s|^#!.*|#!/usr/bin/python3|' /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/responsemean + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2amp ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2amp + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2peaks ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2peaks + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2power ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2power + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2response ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/sh2response + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shbasis ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shbasis + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shconv ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shconv + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shview ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/shview + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tck2connectome ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tck2connectome + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tck2fixel ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tck2fixel + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckdfc ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckdfc + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckedit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckedit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckgen ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckgen + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckglobal ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckglobal + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckinfo ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckinfo + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckmap ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckmap + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckresample ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckresample + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksample ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksample + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksift ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksift + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksift2 ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcksift2 + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckstats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tckstats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcktransform ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tcktransform + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tensor2metric ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tensor2metric + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformcalc ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformcalc + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformcompose ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformcompose + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/transformconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfdivide ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfdivide + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfinfo ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfinfo + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfmult ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfmult + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfsmooth ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfsmooth + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfthreshold ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfthreshold + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfvalidate ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/tsfvalidate + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/vectorstats ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/vectorstats + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/voxel2fixel ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/voxel2fixel + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/voxel2mesh ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/voxel2mesh + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warp2metric ']' + grep -q python + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warp2metric + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpconvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpconvert + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpcorrect ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpcorrect + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpinit ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpinit + grep -q python + for f in /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/* + '[' -f /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpinvert ']' + head -n 1 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/lib64/mrtrix3/bin/warpinvert + grep -q python + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + COMPRESS='gzip -9 -n' + COMPRESS_EXT=.gz + /usr/lib/rpm/brp-compress + /usr/lib/rpm/brp-strip /usr/bin/strip + /usr/lib/rpm/brp-strip-comment-note /usr/bin/strip /usr/bin/objdump + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/lib64/mrtrix3/bin/notfound from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/lib64/mrtrix3/bin/gen_scheme from /bin/bash to #!/usr/bin/bash + /usr/lib/rpm/brp-remove-la-files + /usr/lib/rpm/redhat/brp-python-rpm-in-distinfo + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-det --brp -j2 /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT Scanned 18 directories and 307 files, processed 0 inodes, 0 modified (0 replaced + 0 rewritten), 0 unsupported format, 0 errors + /usr/bin/linkdupes --brp /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr Scanned 17 directories and 307 files, considered 177 files, read 0 files, linked 3 files, 0 errors sum of sizes of linked files: 0 bytes Reading /builddir/build/BUILD/mrtrix3-3.0.8-build/SPECPARTS/rpm-debuginfo.specpart Processing files: mrtrix3-3.0.8-3.fc44.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.46Tuyu + umask 022 + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + cd mrtrix3-3.0.8 + DOCDIR=/builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/share/doc/mrtrix3 + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/share/doc/mrtrix3 + cp -pr /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/README.md /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/share/doc/mrtrix3 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.LN5jm8 + umask 022 + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + cd mrtrix3-3.0.8 + LICENSEDIR=/builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/share/licenses/mrtrix3 + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/share/licenses/mrtrix3 + cp -pr /builddir/build/BUILD/mrtrix3-3.0.8-build/mrtrix3-3.0.8/LICENCE.txt /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT/usr/share/licenses/mrtrix3 + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/bin/5tt2gmwmi -> /usr/lib64/mrtrix3/bin/5tt2gmwmi warning: absolute symlink: /usr/bin/5tt2vis -> /usr/lib64/mrtrix3/bin/5tt2vis warning: absolute symlink: /usr/bin/5ttcheck -> /usr/lib64/mrtrix3/bin/5ttcheck warning: absolute symlink: /usr/bin/5ttedit -> /usr/lib64/mrtrix3/bin/5ttedit warning: absolute symlink: /usr/bin/5ttgen -> /usr/lib64/mrtrix3/bin/5ttgen warning: absolute symlink: /usr/bin/afdconnectivity -> /usr/lib64/mrtrix3/bin/afdconnectivity warning: absolute symlink: /usr/bin/amp2response -> /usr/lib64/mrtrix3/bin/amp2response warning: absolute symlink: /usr/bin/amp2sh -> /usr/lib64/mrtrix3/bin/amp2sh warning: absolute symlink: /usr/bin/blend -> /usr/lib64/mrtrix3/bin/blend warning: absolute symlink: /usr/bin/connectome2tck -> /usr/lib64/mrtrix3/bin/connectome2tck warning: absolute symlink: /usr/bin/connectomeedit -> /usr/lib64/mrtrix3/bin/connectomeedit warning: absolute symlink: /usr/bin/connectomestats -> /usr/lib64/mrtrix3/bin/connectomestats warning: absolute symlink: /usr/bin/convert_bruker -> /usr/lib64/mrtrix3/bin/convert_bruker warning: absolute symlink: /usr/bin/dcmedit -> /usr/lib64/mrtrix3/bin/dcmedit warning: absolute symlink: /usr/bin/dcminfo -> /usr/lib64/mrtrix3/bin/dcminfo warning: absolute symlink: /usr/bin/dirflip -> /usr/lib64/mrtrix3/bin/dirflip warning: absolute symlink: /usr/bin/dirgen -> /usr/lib64/mrtrix3/bin/dirgen warning: absolute symlink: /usr/bin/dirmerge -> /usr/lib64/mrtrix3/bin/dirmerge warning: absolute symlink: /usr/bin/dirorder -> /usr/lib64/mrtrix3/bin/dirorder warning: absolute symlink: /usr/bin/dirsplit -> /usr/lib64/mrtrix3/bin/dirsplit warning: absolute symlink: /usr/bin/dirstat -> /usr/lib64/mrtrix3/bin/dirstat warning: absolute symlink: /usr/bin/dwi2adc -> /usr/lib64/mrtrix3/bin/dwi2adc warning: absolute symlink: /usr/bin/dwi2fod -> /usr/lib64/mrtrix3/bin/dwi2fod warning: absolute symlink: /usr/bin/dwi2mask -> /usr/lib64/mrtrix3/bin/dwi2mask warning: absolute symlink: /usr/bin/dwi2response -> /usr/lib64/mrtrix3/bin/dwi2response warning: absolute symlink: /usr/bin/dwi2tensor -> /usr/lib64/mrtrix3/bin/dwi2tensor warning: absolute symlink: /usr/bin/dwibiascorrect -> /usr/lib64/mrtrix3/bin/dwibiascorrect warning: absolute symlink: /usr/bin/dwicat -> /usr/lib64/mrtrix3/bin/dwicat warning: absolute symlink: /usr/bin/dwidenoise -> /usr/lib64/mrtrix3/bin/dwidenoise warning: absolute symlink: /usr/bin/dwiextract -> /usr/lib64/mrtrix3/bin/dwiextract warning: absolute symlink: /usr/bin/dwifslpreproc -> /usr/lib64/mrtrix3/bin/dwifslpreproc warning: absolute symlink: /usr/bin/dwigradcheck -> /usr/lib64/mrtrix3/bin/dwigradcheck warning: absolute symlink: /usr/bin/dwinormalise -> /usr/lib64/mrtrix3/bin/dwinormalise warning: absolute symlink: /usr/bin/dwishellmath -> /usr/lib64/mrtrix3/bin/dwishellmath warning: absolute symlink: /usr/bin/fixel2peaks -> /usr/lib64/mrtrix3/bin/fixel2peaks warning: absolute symlink: /usr/bin/fixel2sh -> /usr/lib64/mrtrix3/bin/fixel2sh warning: absolute symlink: /usr/bin/fixel2tsf -> /usr/lib64/mrtrix3/bin/fixel2tsf warning: absolute symlink: /usr/bin/fixel2voxel -> /usr/lib64/mrtrix3/bin/fixel2voxel warning: absolute symlink: /usr/bin/fixelcfestats -> /usr/lib64/mrtrix3/bin/fixelcfestats warning: absolute symlink: /usr/bin/fixelconnectivity -> /usr/lib64/mrtrix3/bin/fixelconnectivity warning: absolute symlink: /usr/bin/fixelconvert -> /usr/lib64/mrtrix3/bin/fixelconvert warning: absolute symlink: /usr/bin/fixelcorrespondence -> /usr/lib64/mrtrix3/bin/fixelcorrespondence warning: absolute symlink: /usr/bin/fixelcrop -> /usr/lib64/mrtrix3/bin/fixelcrop warning: absolute symlink: /usr/bin/fixelfilter -> /usr/lib64/mrtrix3/bin/fixelfilter warning: absolute symlink: /usr/bin/fixelreorient -> /usr/lib64/mrtrix3/bin/fixelreorient warning: absolute symlink: /usr/bin/fod2dec -> /usr/lib64/mrtrix3/bin/fod2dec warning: absolute symlink: /usr/bin/fod2fixel -> /usr/lib64/mrtrix3/bin/fod2fixel warning: absolute symlink: /usr/bin/for_each -> /usr/lib64/mrtrix3/bin/for_each warning: absolute symlink: /usr/bin/gen_scheme -> /usr/lib64/mrtrix3/bin/gen_scheme warning: absolute symlink: /usr/bin/label2colour -> /usr/lib64/mrtrix3/bin/label2colour warning: absolute symlink: /usr/bin/label2mesh -> /usr/lib64/mrtrix3/bin/label2mesh warning: absolute symlink: /usr/bin/labelconvert -> /usr/lib64/mrtrix3/bin/labelconvert warning: absolute symlink: /usr/bin/labelsgmfix -> /usr/lib64/mrtrix3/bin/labelsgmfix warning: absolute symlink: /usr/bin/labelstats -> /usr/lib64/mrtrix3/bin/labelstats warning: absolute symlink: /usr/bin/maskdump -> /usr/lib64/mrtrix3/bin/maskdump warning: absolute symlink: /usr/bin/maskfilter -> /usr/lib64/mrtrix3/bin/maskfilter warning: absolute symlink: /usr/bin/mesh2voxel -> /usr/lib64/mrtrix3/bin/mesh2voxel warning: absolute symlink: /usr/bin/meshconvert -> /usr/lib64/mrtrix3/bin/meshconvert warning: absolute symlink: /usr/bin/meshfilter -> /usr/lib64/mrtrix3/bin/meshfilter warning: absolute symlink: /usr/bin/mraverageheader -> /usr/lib64/mrtrix3/bin/mraverageheader warning: absolute symlink: /usr/bin/mrcalc -> /usr/lib64/mrtrix3/bin/mrcalc warning: absolute symlink: /usr/bin/mrcat -> /usr/lib64/mrtrix3/bin/mrcat warning: absolute symlink: /usr/bin/mrcentroid -> /usr/lib64/mrtrix3/bin/mrcentroid warning: absolute symlink: /usr/bin/mrcheckerboardmask -> /usr/lib64/mrtrix3/bin/mrcheckerboardmask warning: absolute symlink: /usr/bin/mrclusterstats -> /usr/lib64/mrtrix3/bin/mrclusterstats warning: absolute symlink: /usr/bin/mrcolour -> /usr/lib64/mrtrix3/bin/mrcolour warning: absolute symlink: /usr/bin/mrconvert -> /usr/lib64/mrtrix3/bin/mrconvert warning: absolute symlink: /usr/bin/mrdegibbs -> /usr/lib64/mrtrix3/bin/mrdegibbs warning: absolute symlink: /usr/bin/mrdump -> /usr/lib64/mrtrix3/bin/mrdump warning: absolute symlink: /usr/bin/mredit -> /usr/lib64/mrtrix3/bin/mredit warning: absolute symlink: /usr/bin/mrfilter -> /usr/lib64/mrtrix3/bin/mrfilter warning: absolute symlink: /usr/bin/mrgrid -> /usr/lib64/mrtrix3/bin/mrgrid warning: absolute symlink: /usr/bin/mrhistmatch -> /usr/lib64/mrtrix3/bin/mrhistmatch warning: absolute symlink: /usr/bin/mrhistogram -> /usr/lib64/mrtrix3/bin/mrhistogram warning: absolute symlink: /usr/bin/mrinfo -> /usr/lib64/mrtrix3/bin/mrinfo warning: absolute symlink: /usr/bin/mrmath -> /usr/lib64/mrtrix3/bin/mrmath warning: absolute symlink: /usr/bin/mrmetric -> /usr/lib64/mrtrix3/bin/mrmetric warning: absolute symlink: /usr/bin/mrregister -> /usr/lib64/mrtrix3/bin/mrregister warning: absolute symlink: /usr/bin/mrstats -> /usr/lib64/mrtrix3/bin/mrstats warning: absolute symlink: /usr/bin/mrthreshold -> /usr/lib64/mrtrix3/bin/mrthreshold warning: absolute symlink: /usr/bin/mrtransform -> /usr/lib64/mrtrix3/bin/mrtransform warning: absolute symlink: /usr/bin/mrtrix3.py -> /usr/lib64/mrtrix3/bin/mrtrix3.py warning: absolute symlink: /usr/bin/mrtrix_cleanup -> /usr/lib64/mrtrix3/bin/mrtrix_cleanup warning: absolute symlink: /usr/bin/mrview -> /usr/lib64/mrtrix3/bin/mrview warning: absolute symlink: /usr/bin/mtnormalise -> /usr/lib64/mrtrix3/bin/mtnormalise warning: absolute symlink: /usr/bin/notfound -> /usr/lib64/mrtrix3/bin/notfound warning: absolute symlink: /usr/bin/peaks2amp -> /usr/lib64/mrtrix3/bin/peaks2amp warning: absolute symlink: /usr/bin/peaks2fixel -> /usr/lib64/mrtrix3/bin/peaks2fixel warning: absolute symlink: /usr/bin/population_template -> /usr/lib64/mrtrix3/bin/population_template warning: absolute symlink: /usr/bin/responsemean -> /usr/lib64/mrtrix3/bin/responsemean warning: absolute symlink: /usr/bin/sh2amp -> /usr/lib64/mrtrix3/bin/sh2amp warning: absolute symlink: /usr/bin/sh2peaks -> /usr/lib64/mrtrix3/bin/sh2peaks warning: absolute symlink: /usr/bin/sh2power -> /usr/lib64/mrtrix3/bin/sh2power warning: absolute symlink: /usr/bin/sh2response -> /usr/lib64/mrtrix3/bin/sh2response warning: absolute symlink: /usr/bin/shbasis -> /usr/lib64/mrtrix3/bin/shbasis warning: absolute symlink: /usr/bin/shconv -> /usr/lib64/mrtrix3/bin/shconv warning: absolute symlink: /usr/bin/shview -> /usr/lib64/mrtrix3/bin/shview warning: absolute symlink: /usr/bin/tck2connectome -> /usr/lib64/mrtrix3/bin/tck2connectome warning: absolute symlink: /usr/bin/tck2fixel -> /usr/lib64/mrtrix3/bin/tck2fixel warning: absolute symlink: /usr/bin/tckconvert -> /usr/lib64/mrtrix3/bin/tckconvert warning: absolute symlink: /usr/bin/tckdfc -> /usr/lib64/mrtrix3/bin/tckdfc warning: absolute symlink: /usr/bin/tckedit -> /usr/lib64/mrtrix3/bin/tckedit warning: absolute symlink: /usr/bin/tckgen -> /usr/lib64/mrtrix3/bin/tckgen warning: absolute symlink: /usr/bin/tckglobal -> /usr/lib64/mrtrix3/bin/tckglobal warning: absolute symlink: /usr/bin/tckinfo -> /usr/lib64/mrtrix3/bin/tckinfo warning: absolute symlink: /usr/bin/tckmap -> /usr/lib64/mrtrix3/bin/tckmap warning: absolute symlink: /usr/bin/tckresample -> /usr/lib64/mrtrix3/bin/tckresample warning: absolute symlink: /usr/bin/tcksample -> /usr/lib64/mrtrix3/bin/tcksample warning: absolute symlink: /usr/bin/tcksift -> /usr/lib64/mrtrix3/bin/tcksift warning: absolute symlink: /usr/bin/tcksift2 -> /usr/lib64/mrtrix3/bin/tcksift2 warning: absolute symlink: /usr/bin/tckstats -> /usr/lib64/mrtrix3/bin/tckstats warning: absolute symlink: /usr/bin/tcktransform -> /usr/lib64/mrtrix3/bin/tcktransform warning: absolute symlink: /usr/bin/tensor2metric -> /usr/lib64/mrtrix3/bin/tensor2metric warning: absolute symlink: /usr/bin/transformcalc -> /usr/lib64/mrtrix3/bin/transformcalc warning: absolute symlink: /usr/bin/transformcompose -> /usr/lib64/mrtrix3/bin/transformcompose warning: absolute symlink: /usr/bin/transformconvert -> /usr/lib64/mrtrix3/bin/transformconvert warning: absolute symlink: /usr/bin/tsfdivide -> /usr/lib64/mrtrix3/bin/tsfdivide warning: absolute symlink: /usr/bin/tsfinfo -> /usr/lib64/mrtrix3/bin/tsfinfo warning: absolute symlink: /usr/bin/tsfmult -> /usr/lib64/mrtrix3/bin/tsfmult warning: absolute symlink: /usr/bin/tsfsmooth -> /usr/lib64/mrtrix3/bin/tsfsmooth warning: absolute symlink: /usr/bin/tsfthreshold -> /usr/lib64/mrtrix3/bin/tsfthreshold warning: absolute symlink: /usr/bin/tsfvalidate -> /usr/lib64/mrtrix3/bin/tsfvalidate warning: absolute symlink: /usr/bin/vectorstats -> /usr/lib64/mrtrix3/bin/vectorstats warning: absolute symlink: /usr/bin/voxel2fixel -> /usr/lib64/mrtrix3/bin/voxel2fixel warning: absolute symlink: /usr/bin/voxel2mesh -> /usr/lib64/mrtrix3/bin/voxel2mesh warning: absolute symlink: /usr/bin/warp2metric -> /usr/lib64/mrtrix3/bin/warp2metric warning: absolute symlink: /usr/bin/warpconvert -> /usr/lib64/mrtrix3/bin/warpconvert warning: absolute symlink: /usr/bin/warpcorrect -> /usr/lib64/mrtrix3/bin/warpcorrect warning: absolute symlink: /usr/bin/warpinit -> /usr/lib64/mrtrix3/bin/warpinit warning: absolute symlink: /usr/bin/warpinvert -> /usr/lib64/mrtrix3/bin/warpinvert Provides: bundled(eigen3) = 3.4.0 libmrtrix.so()(64bit) mrtrix3 = 3.0.8-3.fc44 mrtrix3(x86-64) = 3.0.8-3.fc44 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash /usr/bin/python3 libGL.so.1()(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.33)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libc.so.6(GLIBC_ABI_DT_RELR)(64bit) libc.so.6(GLIBC_ABI_GNU2_TLS)(64bit) libfftw3.so.3()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.23)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.35)(64bit) libm.so.6(GLIBC_2.43)(64bit) libmrtrix.so()(64bit) libpng16.so.16()(64bit) libpng16.so.16(PNG16_0)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.1)(64bit) libstdc++.so.6(CXXABI_1.3.11)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.15)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.17)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.19)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.5)(64bit) libtiff.so.6()(64bit) libtiff.so.6(LIBTIFF_4.0)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/mrtrix3-3.0.8-build/BUILDROOT Wrote: /builddir/build/RPMS/mrtrix3-3.0.8-3.fc44.x86_64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.7Iw8pr + umask 022 + cd /builddir/build/BUILD/mrtrix3-3.0.8-build + test -d /builddir/build/BUILD/mrtrix3-3.0.8-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/mrtrix3-3.0.8-build + rm -rf /builddir/build/BUILD/mrtrix3-3.0.8-build + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/bin/5tt2gmwmi -> /usr/lib64/mrtrix3/bin/5tt2gmwmi absolute symlink: /usr/bin/5tt2vis -> /usr/lib64/mrtrix3/bin/5tt2vis absolute symlink: /usr/bin/5ttcheck -> /usr/lib64/mrtrix3/bin/5ttcheck absolute symlink: /usr/bin/5ttedit -> /usr/lib64/mrtrix3/bin/5ttedit absolute symlink: /usr/bin/5ttgen -> /usr/lib64/mrtrix3/bin/5ttgen absolute symlink: /usr/bin/afdconnectivity -> /usr/lib64/mrtrix3/bin/afdconnectivity absolute symlink: /usr/bin/amp2response -> /usr/lib64/mrtrix3/bin/amp2response absolute symlink: /usr/bin/amp2sh -> /usr/lib64/mrtrix3/bin/amp2sh absolute symlink: /usr/bin/blend -> /usr/lib64/mrtrix3/bin/blend absolute symlink: /usr/bin/connectome2tck -> /usr/lib64/mrtrix3/bin/connectome2tck absolute symlink: /usr/bin/connectomeedit -> /usr/lib64/mrtrix3/bin/connectomeedit absolute symlink: /usr/bin/connectomestats -> /usr/lib64/mrtrix3/bin/connectomestats absolute symlink: /usr/bin/convert_bruker -> /usr/lib64/mrtrix3/bin/convert_bruker absolute symlink: /usr/bin/dcmedit -> /usr/lib64/mrtrix3/bin/dcmedit absolute symlink: /usr/bin/dcminfo -> /usr/lib64/mrtrix3/bin/dcminfo absolute symlink: /usr/bin/dirflip -> /usr/lib64/mrtrix3/bin/dirflip absolute symlink: /usr/bin/dirgen -> /usr/lib64/mrtrix3/bin/dirgen absolute symlink: /usr/bin/dirmerge -> /usr/lib64/mrtrix3/bin/dirmerge absolute symlink: /usr/bin/dirorder -> /usr/lib64/mrtrix3/bin/dirorder absolute symlink: /usr/bin/dirsplit -> /usr/lib64/mrtrix3/bin/dirsplit absolute symlink: /usr/bin/dirstat -> /usr/lib64/mrtrix3/bin/dirstat absolute symlink: /usr/bin/dwi2adc -> /usr/lib64/mrtrix3/bin/dwi2adc absolute symlink: /usr/bin/dwi2fod -> /usr/lib64/mrtrix3/bin/dwi2fod absolute symlink: /usr/bin/dwi2mask -> /usr/lib64/mrtrix3/bin/dwi2mask absolute symlink: /usr/bin/dwi2response -> /usr/lib64/mrtrix3/bin/dwi2response absolute symlink: /usr/bin/dwi2tensor -> /usr/lib64/mrtrix3/bin/dwi2tensor absolute symlink: /usr/bin/dwibiascorrect -> /usr/lib64/mrtrix3/bin/dwibiascorrect absolute symlink: /usr/bin/dwicat -> /usr/lib64/mrtrix3/bin/dwicat absolute symlink: /usr/bin/dwidenoise -> /usr/lib64/mrtrix3/bin/dwidenoise absolute symlink: /usr/bin/dwiextract -> /usr/lib64/mrtrix3/bin/dwiextract absolute symlink: /usr/bin/dwifslpreproc -> /usr/lib64/mrtrix3/bin/dwifslpreproc absolute symlink: /usr/bin/dwigradcheck -> /usr/lib64/mrtrix3/bin/dwigradcheck absolute symlink: /usr/bin/dwinormalise -> /usr/lib64/mrtrix3/bin/dwinormalise absolute symlink: /usr/bin/dwishellmath -> /usr/lib64/mrtrix3/bin/dwishellmath absolute symlink: /usr/bin/fixel2peaks -> /usr/lib64/mrtrix3/bin/fixel2peaks absolute symlink: /usr/bin/fixel2sh -> /usr/lib64/mrtrix3/bin/fixel2sh absolute symlink: /usr/bin/fixel2tsf -> /usr/lib64/mrtrix3/bin/fixel2tsf absolute symlink: /usr/bin/fixel2voxel -> /usr/lib64/mrtrix3/bin/fixel2voxel absolute symlink: /usr/bin/fixelcfestats -> /usr/lib64/mrtrix3/bin/fixelcfestats absolute symlink: /usr/bin/fixelconnectivity -> /usr/lib64/mrtrix3/bin/fixelconnectivity absolute symlink: /usr/bin/fixelconvert -> /usr/lib64/mrtrix3/bin/fixelconvert absolute symlink: /usr/bin/fixelcorrespondence -> /usr/lib64/mrtrix3/bin/fixelcorrespondence absolute symlink: /usr/bin/fixelcrop -> /usr/lib64/mrtrix3/bin/fixelcrop absolute symlink: /usr/bin/fixelfilter -> /usr/lib64/mrtrix3/bin/fixelfilter absolute symlink: /usr/bin/fixelreorient -> /usr/lib64/mrtrix3/bin/fixelreorient absolute symlink: /usr/bin/fod2dec -> /usr/lib64/mrtrix3/bin/fod2dec absolute symlink: /usr/bin/fod2fixel -> /usr/lib64/mrtrix3/bin/fod2fixel absolute symlink: /usr/bin/for_each -> /usr/lib64/mrtrix3/bin/for_each absolute symlink: /usr/bin/gen_scheme -> /usr/lib64/mrtrix3/bin/gen_scheme absolute symlink: /usr/bin/label2colour -> /usr/lib64/mrtrix3/bin/label2colour absolute symlink: /usr/bin/label2mesh -> /usr/lib64/mrtrix3/bin/label2mesh absolute symlink: /usr/bin/labelconvert -> /usr/lib64/mrtrix3/bin/labelconvert absolute symlink: /usr/bin/labelsgmfix -> /usr/lib64/mrtrix3/bin/labelsgmfix absolute symlink: /usr/bin/labelstats -> /usr/lib64/mrtrix3/bin/labelstats absolute symlink: /usr/bin/maskdump -> /usr/lib64/mrtrix3/bin/maskdump absolute symlink: /usr/bin/maskfilter -> /usr/lib64/mrtrix3/bin/maskfilter absolute symlink: /usr/bin/mesh2voxel -> /usr/lib64/mrtrix3/bin/mesh2voxel absolute symlink: /usr/bin/meshconvert -> /usr/lib64/mrtrix3/bin/meshconvert absolute symlink: /usr/bin/meshfilter -> /usr/lib64/mrtrix3/bin/meshfilter absolute symlink: /usr/bin/mraverageheader -> /usr/lib64/mrtrix3/bin/mraverageheader absolute symlink: /usr/bin/mrcalc -> /usr/lib64/mrtrix3/bin/mrcalc absolute symlink: /usr/bin/mrcat -> /usr/lib64/mrtrix3/bin/mrcat absolute symlink: /usr/bin/mrcentroid -> /usr/lib64/mrtrix3/bin/mrcentroid absolute symlink: /usr/bin/mrcheckerboardmask -> /usr/lib64/mrtrix3/bin/mrcheckerboardmask absolute symlink: /usr/bin/mrclusterstats -> /usr/lib64/mrtrix3/bin/mrclusterstats absolute symlink: /usr/bin/mrcolour -> /usr/lib64/mrtrix3/bin/mrcolour absolute symlink: /usr/bin/mrconvert -> /usr/lib64/mrtrix3/bin/mrconvert absolute symlink: /usr/bin/mrdegibbs -> /usr/lib64/mrtrix3/bin/mrdegibbs absolute symlink: /usr/bin/mrdump -> /usr/lib64/mrtrix3/bin/mrdump absolute symlink: /usr/bin/mredit -> /usr/lib64/mrtrix3/bin/mredit absolute symlink: /usr/bin/mrfilter -> /usr/lib64/mrtrix3/bin/mrfilter absolute symlink: /usr/bin/mrgrid -> /usr/lib64/mrtrix3/bin/mrgrid absolute symlink: /usr/bin/mrhistmatch -> /usr/lib64/mrtrix3/bin/mrhistmatch absolute symlink: /usr/bin/mrhistogram -> /usr/lib64/mrtrix3/bin/mrhistogram absolute symlink: /usr/bin/mrinfo -> /usr/lib64/mrtrix3/bin/mrinfo absolute symlink: /usr/bin/mrmath -> /usr/lib64/mrtrix3/bin/mrmath absolute symlink: /usr/bin/mrmetric -> /usr/lib64/mrtrix3/bin/mrmetric absolute symlink: /usr/bin/mrregister -> /usr/lib64/mrtrix3/bin/mrregister absolute symlink: /usr/bin/mrstats -> /usr/lib64/mrtrix3/bin/mrstats absolute symlink: /usr/bin/mrthreshold -> /usr/lib64/mrtrix3/bin/mrthreshold absolute symlink: /usr/bin/mrtransform -> /usr/lib64/mrtrix3/bin/mrtransform absolute symlink: /usr/bin/mrtrix3.py -> /usr/lib64/mrtrix3/bin/mrtrix3.py absolute symlink: /usr/bin/mrtrix_cleanup -> /usr/lib64/mrtrix3/bin/mrtrix_cleanup absolute symlink: /usr/bin/mrview -> /usr/lib64/mrtrix3/bin/mrview absolute symlink: /usr/bin/mtnormalise -> /usr/lib64/mrtrix3/bin/mtnormalise absolute symlink: /usr/bin/notfound -> /usr/lib64/mrtrix3/bin/notfound absolute symlink: /usr/bin/peaks2amp -> /usr/lib64/mrtrix3/bin/peaks2amp absolute symlink: /usr/bin/peaks2fixel -> /usr/lib64/mrtrix3/bin/peaks2fixel absolute symlink: /usr/bin/population_template -> /usr/lib64/mrtrix3/bin/population_template absolute symlink: /usr/bin/responsemean -> /usr/lib64/mrtrix3/bin/responsemean absolute symlink: /usr/bin/sh2amp -> /usr/lib64/mrtrix3/bin/sh2amp absolute symlink: /usr/bin/sh2peaks -> /usr/lib64/mrtrix3/bin/sh2peaks absolute symlink: /usr/bin/sh2power -> /usr/lib64/mrtrix3/bin/sh2power absolute symlink: /usr/bin/sh2response -> /usr/lib64/mrtrix3/bin/sh2response absolute symlink: /usr/bin/shbasis -> /usr/lib64/mrtrix3/bin/shbasis absolute symlink: /usr/bin/shconv -> /usr/lib64/mrtrix3/bin/shconv absolute symlink: /usr/bin/shview -> /usr/lib64/mrtrix3/bin/shview absolute symlink: /usr/bin/tck2connectome -> /usr/lib64/mrtrix3/bin/tck2connectome absolute symlink: /usr/bin/tck2fixel -> /usr/lib64/mrtrix3/bin/tck2fixel absolute symlink: /usr/bin/tckconvert -> /usr/lib64/mrtrix3/bin/tckconvert absolute symlink: /usr/bin/tckdfc -> /usr/lib64/mrtrix3/bin/tckdfc absolute symlink: /usr/bin/tckedit -> /usr/lib64/mrtrix3/bin/tckedit absolute symlink: /usr/bin/tckgen -> /usr/lib64/mrtrix3/bin/tckgen absolute symlink: /usr/bin/tckglobal -> /usr/lib64/mrtrix3/bin/tckglobal absolute symlink: /usr/bin/tckinfo -> /usr/lib64/mrtrix3/bin/tckinfo absolute symlink: /usr/bin/tckmap -> /usr/lib64/mrtrix3/bin/tckmap absolute symlink: /usr/bin/tckresample -> /usr/lib64/mrtrix3/bin/tckresample absolute symlink: /usr/bin/tcksample -> /usr/lib64/mrtrix3/bin/tcksample absolute symlink: /usr/bin/tcksift -> /usr/lib64/mrtrix3/bin/tcksift absolute symlink: /usr/bin/tcksift2 -> /usr/lib64/mrtrix3/bin/tcksift2 absolute symlink: /usr/bin/tckstats -> /usr/lib64/mrtrix3/bin/tckstats absolute symlink: /usr/bin/tcktransform -> /usr/lib64/mrtrix3/bin/tcktransform absolute symlink: /usr/bin/tensor2metric -> /usr/lib64/mrtrix3/bin/tensor2metric absolute symlink: /usr/bin/transformcalc -> /usr/lib64/mrtrix3/bin/transformcalc absolute symlink: /usr/bin/transformcompose -> /usr/lib64/mrtrix3/bin/transformcompose absolute symlink: /usr/bin/transformconvert -> /usr/lib64/mrtrix3/bin/transformconvert absolute symlink: /usr/bin/tsfdivide -> /usr/lib64/mrtrix3/bin/tsfdivide absolute symlink: /usr/bin/tsfinfo -> /usr/lib64/mrtrix3/bin/tsfinfo absolute symlink: /usr/bin/tsfmult -> /usr/lib64/mrtrix3/bin/tsfmult absolute symlink: /usr/bin/tsfsmooth -> /usr/lib64/mrtrix3/bin/tsfsmooth absolute symlink: /usr/bin/tsfthreshold -> /usr/lib64/mrtrix3/bin/tsfthreshold absolute symlink: /usr/bin/tsfvalidate -> /usr/lib64/mrtrix3/bin/tsfvalidate absolute symlink: /usr/bin/vectorstats -> /usr/lib64/mrtrix3/bin/vectorstats absolute symlink: /usr/bin/voxel2fixel -> /usr/lib64/mrtrix3/bin/voxel2fixel absolute symlink: /usr/bin/voxel2mesh -> /usr/lib64/mrtrix3/bin/voxel2mesh absolute symlink: /usr/bin/warp2metric -> /usr/lib64/mrtrix3/bin/warp2metric absolute symlink: /usr/bin/warpconvert -> /usr/lib64/mrtrix3/bin/warpconvert absolute symlink: /usr/bin/warpcorrect -> /usr/lib64/mrtrix3/bin/warpcorrect absolute symlink: /usr/bin/warpinit -> /usr/lib64/mrtrix3/bin/warpinit absolute symlink: /usr/bin/warpinvert -> /usr/lib64/mrtrix3/bin/warpinvert Finish: rpmbuild mrtrix3-3.0.8-3.fc44.src.rpm Finish: build phase for mrtrix3-3.0.8-3.fc44.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-44-x86_64-1777994715.390577/root/var/log/dnf5.log INFO: chroot_scan: creating tarball /var/lib/copr-rpmbuild/results/chroot_scan.tar.gz /bin/tar: Removing leading `/' from member names INFO: Done(/var/lib/copr-rpmbuild/results/mrtrix3-3.0.8-3.fc44.src.rpm) Config(child) 33 minutes 3 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "mrtrix3", "epoch": null, "version": "3.0.8", "release": "3.fc44", "arch": "x86_64" }, { "name": "mrtrix3", "epoch": null, "version": "3.0.8", "release": "3.fc44", "arch": "src" } ] } RPMResults finished