Mock Version: 2.6 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-odbc.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1601547185.024705/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xo9y33el:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xo9y33el:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '01a0f337cb4d4f239a731f02a5f0caa0', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1601547185.024705/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xo9y33el:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bs --target x86_64 --nodeps /builddir/build/SPECS/R-odbc.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1598572800 Wrote: /builddir/build/SRPMS/R-odbc-1.2.3-2.fc34.src.rpm Child return code was: 0 ENTER ['do_with_status'](['bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-odbc.spec'], chrootPath='/var/lib/mock/fedora-rawhide-x86_64-1601547185.024705/root'env={'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8'}shell=Falselogger=timeout=0uid=1001gid=135user='mockbuild'nspawn_args=['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xo9y33el:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11']unshare_net=TrueprintOutput=True) Using nspawn with args ['--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xo9y33el:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11'] Executing command: ['/usr/bin/systemd-nspawn', '-q', '-M', '27a3a8bb6bca42bbb8653032133484c2', '-D', '/var/lib/mock/fedora-rawhide-x86_64-1601547185.024705/root', '-a', '-u', 'mockbuild', '--capability=cap_ipc_lock', '--rlimit=RLIMIT_NOFILE=10240', '--capability=cap_ipc_lock', '--bind=/tmp/mock-resolv.xo9y33el:/etc/resolv.conf', '--bind=/dev/btrfs-control', '--bind=/dev/loop-control', '--bind=/dev/loop0', '--bind=/dev/loop1', '--bind=/dev/loop2', '--bind=/dev/loop3', '--bind=/dev/loop4', '--bind=/dev/loop5', '--bind=/dev/loop6', '--bind=/dev/loop7', '--bind=/dev/loop8', '--bind=/dev/loop9', '--bind=/dev/loop10', '--bind=/dev/loop11', '--console=pipe', '--setenv=TERM=vt100', '--setenv=SHELL=/bin/bash', '--setenv=HOME=/builddir', '--setenv=HOSTNAME=mock', '--setenv=PATH=/usr/bin:/bin:/usr/sbin:/sbin', '--setenv=PROMPT_COMMAND=printf "\\033]0;\\007"', '--setenv=PS1= \\s-\\v\\$ ', '--setenv=LANG=C.UTF-8', '--resolv-conf=off', 'bash', '--login', '-c', '/usr/bin/rpmbuild -bb --target x86_64 --nodeps /builddir/build/SPECS/R-odbc.spec'] with env {'TERM': 'vt100', 'SHELL': '/bin/bash', 'HOME': '/builddir', 'HOSTNAME': 'mock', 'PATH': '/usr/bin:/bin:/usr/sbin:/sbin', 'PROMPT_COMMAND': 'printf "\\033]0;\\007"', 'PS1': ' \\s-\\v\\$ ', 'LANG': 'C.UTF-8', 'SYSTEMD_NSPAWN_TMPFS_TMP': '0'} and shell False Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1598572800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.u3q1ew + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf odbc + /usr/bin/mkdir -p odbc + cd odbc + /usr/bin/gzip -dc /builddir/build/SOURCES/odbc_1.2.3.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + sed -i 's/covr, //g' odbc/DESCRIPTION + rm -r odbc/src/cctz + sed -i -e '/PKG_CXXFLAGS/s!-Icctz/include!-I/usr/include/cctz!' -e '/PKG_LIBS/s!-Lcctz !!' -e '/$(OBJECTS):/s!cctz/libcctz.a!!' odbc/src/Makevars.in + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.vzSZxu + umask 022 + cd /builddir/build/BUILD + cd odbc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.1ewq6u + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64 ++ dirname /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64 + cd odbc + mkdir -p /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64/usr/lib64/R/library + /usr/bin/R CMD INSTALL -l /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64/usr/lib64/R/library odbc * installing *source* package 'odbc' ... files 'src/cctz/LICENSE.txt', 'src/cctz/Makefile', 'src/cctz/WORKSPACE', 'src/cctz/examples/classic.cc', 'src/cctz/examples/epoch_shift.cc', 'src/cctz/examples/example1.cc', 'src/cctz/examples/example2.cc', 'src/cctz/examples/example3.cc', 'src/cctz/examples/example4.cc', 'src/cctz/examples/hello.cc', 'src/cctz/include/civil_time.h', 'src/cctz/include/civil_time_detail.h', 'src/cctz/include/time_zone.h', 'src/cctz/src/cctz.h', 'src/cctz/src/cctz_v1_test.cc', 'src/cctz/src/civil_time_test.cc', 'src/cctz/src/time_tool.cc', 'src/cctz/src/time_zone_format.cc', 'src/cctz/src/time_zone_format_test.cc', 'src/cctz/src/time_zone_if.cc', 'src/cctz/src/time_zone_if.h', 'src/cctz/src/time_zone_impl.cc', 'src/cctz/src/time_zone_impl.h', 'src/cctz/src/time_zone_info.cc', 'src/cctz/src/time_zone_info.h', 'src/cctz/src/time_zone_libc.cc', 'src/cctz/src/time_zone_libc.h', 'src/cctz/src/time_zone_lookup.cc', 'src/cctz/src/time_zone_lookup_test.cc', 'src/cctz/src/time_zone_posix.cc', 'src/cctz/src/time_zone_posix.h', 'src/cctz/src/tzfile.h' are missing files 'DESCRIPTION', 'src/Makevars.in' have the wrong MD5 checksums ** using staged installation Found odbc_config cflags and libs! PKG_CFLAGS=-DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include PKG_LIBS=-L/usr/lib64 -lodbc ** libs g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c odbc_result.cpp -o odbc_result.o g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c connection.cpp -o connection.o g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c nanodbc/nanodbc.cpp -o nanodbc.o g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c result.cpp -o result.o g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c odbc_connection.cpp -o odbc_connection.o g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c RcppExports.cpp -o RcppExports.o g++ -m64 -std=gnu++11 -I"/usr/include/R" -DNDEBUG -DHAVE_UNISTD_H -DHAVE_PWD_H -DHAVE_SYS_TYPES_H -DHAVE_LONG_LONG -DSIZEOF_LONG_INT=8 -I/usr/include -I'/usr/lib64/R/library/Rcpp/include' -I/usr/local/include -I/usr/include/cctz -Inanodbc -I. -DBUILD_REAL_64_BIT_MODE -DNANODBC_ODBC_VERSION=SQL_OV_ODBC3 -fpic -fpic -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -c Iconv.cpp -o Iconv.o g++ -m64 -std=gnu++11 -shared -L/usr/lib64/R/lib -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -o odbc.so odbc_result.o connection.o nanodbc.o result.o odbc_connection.o RcppExports.o Iconv.o -L/usr/lib64 -lodbc -lcctz -L/usr/lib64/R/lib -lR installing to /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64/usr/lib64/R/library/00LOCK-odbc/00new/odbc/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'odbc' finding HTML links ... done OdbcConnection html finding level-2 HTML links ... done OdbcDriver html OdbcResult html dbConnect-OdbcDriver-method html dbListFields-OdbcConnection-character-method html dbListTables-OdbcConnection-method html hidden_aliases html odbc-package html odbc-tables html odbc html odbcConnectionActions html odbcConnectionColumns html odbcConnectionIcon html odbcDataType html odbcListColumns html odbcListDataSources html odbcListDrivers html odbcListObjectTypes html odbcListObjects html odbcPreviewObject html odbcSetTransactionIsolationLevel html test_roundtrip html ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (odbc) + test -d odbc/src + cd odbc/src + rm -f Iconv.o RcppExports.o connection.o nanodbc.o odbc_connection.o odbc_result.o result.o odbc.so + rm -f /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64/usr/lib64/R/library/R.css + /usr/lib/rpm/find-debuginfo.sh -j2 --strict-build-id -m -i --build-id-seed 1.2.3-2.fc34 --unique-debug-suffix -1.2.3-2.fc34.x86_64 --unique-debug-src-base R-odbc-1.2.3-2.fc34.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/odbc explicitly decompress any DWARF compressed ELF sections in /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64/usr/lib64/R/library/odbc/libs/odbc.so extracting debug info from /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64/usr/lib64/R/library/odbc/libs/odbc.so original debug info size: 7844kB, size after compression: 7044kB /usr/lib/rpm/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 570 blocks + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 + /usr/lib/rpm/brp-python-hardlink + /usr/lib/rpm/redhat/brp-mangle-shebangs Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.eHGnSw + umask 022 + cd /builddir/build/BUILD + cd odbc + /usr/bin/R CMD check odbc * using log directory '/builddir/build/BUILD/odbc/odbc.Rcheck' * using R version 4.0.2 (2020-06-22) * using platform: x86_64-redhat-linux-gnu (64-bit) * using session charset: ASCII * checking for file 'odbc/DESCRIPTION' ... OK * this is package 'odbc' version '1.2.3' * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib: cannot open URL 'https://CRAN.R-project.org/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/bioc/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/bioc/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/annotation/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/data/annotation/src/contrib/PACKAGES' Warning: unable to access index for repository https://bioconductor.org/packages/3.11/data/experiment/src/contrib: cannot open URL 'https://bioconductor.org/packages/3.11/data/experiment/src/contrib/PACKAGES' OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package 'odbc' can be installed ... OK * checking installed package size ... NOTE installed size is 8.1Mb sub-directories of 1Mb or more: libs 7.7Mb * checking package directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... WARNING Warning in Sys.setlocale("LC_CTYPE", "en_US.UTF-8") : OS reports request to set locale to "en_US.UTF-8" cannot be honored * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... WARNING Error: package or namespace load failed for 'odbc' in loadNamespace(i, c(lib.loc, .libPaths()), versionCheck = vI[[i]]): there is no package called 'DBI' Execution halted It looks like this package has a loading problem when not on .libPaths: see the messages for details. * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking line endings in shell scripts ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... NOTE Package has both 'src/Makevars.in' and 'src/Makevars'. Installation with --no-configure' is unlikely to work. If you intended 'src/Makevars' to be used on Windows, rename it to 'src/Makevars.win' otherwise remove it. If 'configure' created 'src/Makevars', you need a 'cleanup' script. * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking compiled code ... OK * checking examples ... WARNING checking a package with encoding 'UTF-8' in an ASCII locale * checking for unstated dependencies in 'tests' ... OK * checking tests ... Running 'testthat.R' OK * checking PDF version of manual ... OK * DONE Status: 3 WARNINGs, 2 NOTEs See '/builddir/build/BUILD/odbc/odbc.Rcheck/00check.log' for details. + RPM_EC=0 ++ jobs -p + exit 0 Processing files: R-odbc-1.2.3-2.fc34.x86_64 Provides: R(odbc) = 1.2.3 R-odbc = 1.2.3-2.fc34 R-odbc(x86-64) = 1.2.3-2.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: R(ABI) = 4.0 R(DBI) >= 1.0.0 R(Rcpp) >= 0.12.11 R(bit64) R(blob) >= 1.2.0 R(hms) R(methods) R(rlang) R-core >= 3.2.0 libR.so()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.4)(64bit) libcctz.so.2()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libodbc.so.2()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) rtld(GNU_HASH) Suggests: R(DBItest) R(RSQLite) R(magrittr) R(testthat) R(tibble) Processing files: R-odbc-debugsource-1.2.3-2.fc34.x86_64 Provides: R-odbc-debugsource = 1.2.3-2.fc34 R-odbc-debugsource(x86-64) = 1.2.3-2.fc34 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: R-odbc-debuginfo-1.2.3-2.fc34.x86_64 Provides: R-odbc-debuginfo = 1.2.3-2.fc34 R-odbc-debuginfo(x86-64) = 1.2.3-2.fc34 debuginfo(build-id) = 48313dd5d47b07bfc313e7a67f110965c340f079 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: R-odbc-debugsource(x86-64) = 1.2.3-2.fc34 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64 Wrote: /builddir/build/RPMS/R-odbc-1.2.3-2.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/R-odbc-debugsource-1.2.3-2.fc34.x86_64.rpm Wrote: /builddir/build/RPMS/R-odbc-debuginfo-1.2.3-2.fc34.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.KQHGkv + umask 022 + cd /builddir/build/BUILD + cd odbc + /usr/bin/rm -rf /builddir/build/BUILDROOT/R-odbc-1.2.3-2.fc34.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Child return code was: 0