Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c1c8' (ED25519) to the list of known hosts. Running: /usr/bin/copr-rpmbuild --verbose --drop-resultdir --build-id 4256959 --chroot fedora-rawhide-x86_64 --detached Version: 0.57 PID: 7019 Logging PID: 7020 Task: {'appstream': True, 'background': True, 'build_id': 4256959, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-x86_64', 'enable_net': False, 'fedora_review': False, 'git_hash': 'ba4d1a1af549c37e90424229ad28e79e90516a9d', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/orion/openmpi5/dolfin.git', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'dolfin', 'package_version': '2019.1.0.post0-30.fc36', 'project_dirname': 'openmpi5', 'project_name': 'openmpi5', 'project_owner': 'orion', 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/orion/openmpi5/fedora-rawhide-x86_64/', 'id': 'copr_base', 'name': 'Copr repository'}], 'sandbox': 'orion/openmpi5--orion', 'source_json': {}, 'source_type': None, 'submitter': 'orion', 'tags': [], 'task_id': '4256959-fedora-rawhide-x86_64', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/orion/openmpi5/dolfin.git /var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin --depth 500 --no-single-branch cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/orion/openmpi5/dolfin.git', '/var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin', '--depth', '500', '--no-single-branch'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin'... Running: git checkout ba4d1a1af549c37e90424229ad28e79e90516a9d cmd: ['git', 'checkout', 'ba4d1a1af549c37e90424229ad28e79e90516a9d'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin rc: 0 stdout: stderr: Note: switching to 'ba4d1a1af549c37e90424229ad28e79e90516a9d'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at ba4d1a1 automatic import of dolfin Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading dolfin-2019.1.0.post0.tar.gz INFO: Calling: curl -H Pragma: -o dolfin-2019.1.0.post0.tar.gz --location --remote-time --show-error --fail https://copr-dist-git.fedorainfracloud.org/repo/pkgs/orion/openmpi5/dolfin/dolfin-2019.1.0.post0.tar.gz/md5/79a564ec8f605b8ec434366828e84b60/dolfin-2019.1.0.post0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 10.2M 100 10.2M 0 0 16.4M 0 --:--:-- --:--:-- --:--:-- 16.4M INFO: Reading stdout from command: md5sum dolfin-2019.1.0.post0.tar.gz Running (timeout=18000): unbuffer mock --buildsrpm --spec /var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin/dolfin.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1650168589.696153 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.0 starting (python version = 3.10.2, NVR = mock-3.0-1.fc35)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin/dolfin.spec) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1650168589.696153/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.0 INFO: Mock Version: 3.0 Start(bootstrap): dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Updating Subscription Management repositories. Unable to read consumer identity This system is not registered with an entitlement server. You can use subscription-manager to register. Copr repository 2.4 MB/s | 486 kB 00:00 fedora 8.4 MB/s | 64 MB 00:07 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: dnf noarch 4.11.1-2.fc37 fedora 454 k dnf-plugins-core noarch 4.1.0-1.fc37 fedora 34 k Installing dependencies: alternatives x86_64 1.19-2.fc36 fedora 36 k audit-libs x86_64 3.0.8-1.fc37 fedora 116 k basesystem noarch 11-13.fc36 fedora 7.0 k bash x86_64 5.1.16-2.fc36 fedora 1.7 M bzip2-libs x86_64 1.0.8-11.fc36 fedora 41 k ca-certificates noarch 2021.2.52-3.fc36 fedora 367 k coreutils x86_64 9.0-5.fc37 fedora 1.1 M coreutils-common x86_64 9.0-5.fc37 fedora 2.0 M crypto-policies noarch 20220412-1.git97fe449.fc37 fedora 58 k curl x86_64 7.82.0-2.fc37 fedora 309 k cyrus-sasl-lib x86_64 2.1.28-1.fc37 fedora 793 k dbus-libs x86_64 1:1.14.0-1.fc37 fedora 154 k dnf-data noarch 4.11.1-2.fc37 fedora 42 k elfutils-default-yama-scope noarch 0.186-5.fc37 fedora 16 k elfutils-libelf x86_64 0.186-5.fc37 fedora 197 k elfutils-libs x86_64 0.186-5.fc37 fedora 255 k expat x86_64 2.4.8-1.fc37 fedora 109 k fedora-gpg-keys noarch 37-0.1 fedora 115 k fedora-release noarch 37-0.3 fedora 12 k fedora-release-common noarch 37-0.3 fedora 22 k fedora-release-identity-basic noarch 37-0.3 fedora 13 k fedora-repos noarch 37-0.1 fedora 11 k fedora-repos-rawhide noarch 37-0.1 fedora 10 k file-libs x86_64 5.41-5.fc37 fedora 635 k filesystem x86_64 3.16-2.fc36 fedora 1.1 M findutils x86_64 1:4.9.0-1.fc36 fedora 483 k gawk x86_64 5.1.1-3.fc37 fedora 1.0 M gdbm-libs x86_64 1:1.22-2.fc36 fedora 58 k glib2 x86_64 2.72.0-1.fc37 fedora 2.7 M glibc x86_64 2.35.9000-12.fc37 fedora 2.1 M glibc-common x86_64 2.35.9000-12.fc37 fedora 336 k glibc-minimal-langpack x86_64 2.35.9000-12.fc37 fedora 57 k gmp x86_64 1:6.2.1-2.fc36 fedora 315 k gnupg2 x86_64 2.3.4-2.fc36 fedora 2.5 M gnutls x86_64 3.7.3-2.fc36 fedora 1.1 M gpgme x86_64 1.17.0-2.fc37 fedora 211 k grep x86_64 3.7-2.fc36 fedora 263 k ima-evm-utils x86_64 1.4-5.fc36 fedora 63 k json-c x86_64 0.15-3.fc36 fedora 43 k keyutils-libs x86_64 1.6.1-4.fc36 fedora 31 k krb5-libs x86_64 1.19.2-9.fc37 fedora 724 k libacl x86_64 2.3.1-3.fc36 fedora 24 k libarchive x86_64 3.6.1-1.fc37 fedora 397 k libassuan x86_64 2.5.5-4.fc36 fedora 67 k libattr x86_64 2.5.1-4.fc36 fedora 18 k libblkid x86_64 2.38-2.fc37 fedora 104 k libbrotli x86_64 1.0.9-7.fc36 fedora 316 k libcap x86_64 2.48-4.fc36 fedora 67 k libcap-ng x86_64 0.8.3-1.fc37 fedora 33 k libcom_err x86_64 1.46.5-2.fc36 fedora 25 k libcomps x86_64 0.1.18-2.fc36 fedora 77 k libcurl x86_64 7.82.0-2.fc37 fedora 299 k libdnf x86_64 0.66.0-1.fc37 fedora 662 k libevent x86_64 2.1.12-6.fc36 fedora 261 k libffi x86_64 3.4.2-8.fc36 fedora 37 k libfsverity x86_64 1.4-7.fc36 fedora 19 k libgcc x86_64 12.0.1-0.15.fc37 fedora 101 k libgcrypt x86_64 1.10.1-2.fc37 fedora 511 k libgomp x86_64 12.0.1-0.15.fc37 fedora 287 k libgpg-error x86_64 1.45-1.fc37 fedora 221 k libidn2 x86_64 2.3.2-4.fc36 fedora 103 k libksba x86_64 1.6.0-3.fc36 fedora 157 k libmodulemd x86_64 2.14.0-2.fc36 fedora 234 k libmount x86_64 2.38-2.fc37 fedora 132 k libnghttp2 x86_64 1.47.0-1.fc37 fedora 71 k libnsl2 x86_64 2.0.0-3.fc36 fedora 30 k libpsl x86_64 0.21.1-5.fc36 fedora 64 k librepo x86_64 1.14.2-2.fc36 fedora 95 k libreport-filesystem noarch 2.17.1-1.fc37 fedora 14 k libselinux x86_64 3.3-4.fc36 fedora 85 k libsemanage x86_64 3.3-3.fc37 fedora 119 k libsepol x86_64 3.3-3.fc36 fedora 309 k libsigsegv x86_64 2.14-2.fc36 fedora 27 k libsmartcols x86_64 2.38-2.fc37 fedora 61 k libsolv x86_64 0.7.21-1.fc37 fedora 405 k libssh x86_64 0.9.6-4.fc36 fedora 203 k libssh-config noarch 0.9.6-4.fc36 fedora 7.6 k libstdc++ x86_64 12.0.1-0.15.fc37 fedora 771 k libtasn1 x86_64 4.18.0-2.fc36 fedora 75 k libtirpc x86_64 1.3.2-1.rc1.fc36.1 fedora 94 k libunistring x86_64 1.0-1.fc36 fedora 551 k libuuid x86_64 2.38-2.fc37 fedora 25 k libverto x86_64 0.3.2-3.fc36 fedora 21 k libxcrypt x86_64 4.4.28-1.fc37 fedora 119 k libxml2 x86_64 2.9.13-1.fc37 fedora 754 k libyaml x86_64 0.2.5-7.fc36 fedora 60 k libzstd x86_64 1.5.2-1.fc36 fedora 295 k lua-libs x86_64 5.4.4-2.fc37 fedora 217 k lz4-libs x86_64 1.9.3-4.fc36 fedora 70 k mpdecimal x86_64 2.5.1-3.fc36 fedora 102 k mpfr x86_64 4.1.0-9.fc36 fedora 333 k ncurses-base noarch 6.2-9.20210508.fc36 fedora 60 k ncurses-libs x86_64 6.2-9.20210508.fc36 fedora 326 k nettle x86_64 3.7.3-3.fc36 fedora 399 k npth x86_64 1.6-8.fc36 fedora 24 k openldap x86_64 2.6.1-2.fc36 fedora 254 k openldap-compat x86_64 2.6.1-2.fc36 fedora 18 k openssl-libs x86_64 1:3.0.2-2.fc37 fedora 2.1 M p11-kit x86_64 0.24.1-2.fc36 fedora 362 k p11-kit-trust x86_64 0.24.1-2.fc36 fedora 138 k pcre x86_64 8.45-1.fc36.1 fedora 203 k pcre2 x86_64 10.39-1.fc36.1 fedora 231 k pcre2-syntax noarch 10.39-1.fc36.1 fedora 143 k popt x86_64 1.18-7.fc36 fedora 59 k publicsuffix-list-dafsa noarch 20210518-4.fc36 fedora 58 k python-pip-wheel noarch 22.0.4-1.fc37 fedora 1.5 M python-setuptools-wheel noarch 60.9.3-1.fc37 fedora 608 k python3 x86_64 3.10.4-1.fc37 fedora 27 k python3-dateutil noarch 1:2.8.2-1.fc37 fedora 309 k python3-dbus x86_64 1.2.18-3.fc36 fedora 132 k python3-distro noarch 1.7.0-1.fc37 fedora 39 k python3-dnf noarch 4.11.1-2.fc37 fedora 414 k python3-dnf-plugins-core noarch 4.1.0-1.fc37 fedora 220 k python3-gpg x86_64 1.17.0-2.fc37 fedora 264 k python3-hawkey x86_64 0.66.0-1.fc37 fedora 108 k python3-libcomps x86_64 0.1.18-2.fc36 fedora 48 k python3-libdnf x86_64 0.66.0-1.fc37 fedora 797 k python3-libs x86_64 3.10.4-1.fc37 fedora 7.4 M python3-rpm x86_64 4.17.0-10.fc37 fedora 92 k python3-six noarch 1.16.0-5.fc36 fedora 36 k readline x86_64 8.1-6.fc36 fedora 211 k rpm x86_64 4.17.0-10.fc37 fedora 540 k rpm-build-libs x86_64 4.17.0-10.fc37 fedora 94 k rpm-libs x86_64 4.17.0-10.fc37 fedora 316 k rpm-sign-libs x86_64 4.17.0-10.fc37 fedora 27 k sed x86_64 4.8-10.fc36 fedora 297 k setup noarch 2.13.9.1-3.fc36 fedora 143 k shadow-utils x86_64 2:4.11.1-2.fc37 fedora 1.1 M sqlite-libs x86_64 3.38.2-1.fc37 fedora 654 k systemd-libs x86_64 251~rc1-3.fc37 fedora 616 k tpm2-tss x86_64 3.2.0-1.fc37 fedora 596 k tzdata noarch 2022a-1.fc37 fedora 432 k xz-libs x86_64 5.2.5-8.fc36 fedora 93 k zchunk-libs x86_64 1.2.1-1.fc37 fedora 50 k zlib x86_64 1.2.11-31.fc36 fedora 91 k Transaction Summary ================================================================================ Install 137 Packages Total download size: 52 M Installed size: 178 M Downloading Packages: (1/137): basesystem-11-13.fc36.noarch.rpm 238 kB/s | 7.0 kB 00:00 (2/137): alternatives-1.19-2.fc36.x86_64.rpm 759 kB/s | 36 kB 00:00 (3/137): bzip2-libs-1.0.8-11.fc36.x86_64.rpm 1.7 MB/s | 41 kB 00:00 (4/137): audit-libs-3.0.8-1.fc37.x86_64.rpm 1.5 MB/s | 116 kB 00:00 (5/137): ca-certificates-2021.2.52-3.fc36.noarc 5.5 MB/s | 367 kB 00:00 (6/137): bash-5.1.16-2.fc36.x86_64.rpm 13 MB/s | 1.7 MB 00:00 (7/137): coreutils-9.0-5.fc37.x86_64.rpm 13 MB/s | 1.1 MB 00:00 (8/137): crypto-policies-20220412-1.git97fe449. 3.3 MB/s | 58 kB 00:00 (9/137): curl-7.82.0-2.fc37.x86_64.rpm 14 MB/s | 309 kB 00:00 (10/137): cyrus-sasl-lib-2.1.28-1.fc37.x86_64.r 25 MB/s | 793 kB 00:00 (11/137): dbus-libs-1.14.0-1.fc37.x86_64.rpm 5.9 MB/s | 154 kB 00:00 (12/137): dnf-data-4.11.1-2.fc37.noarch.rpm 2.0 MB/s | 42 kB 00:00 (13/137): dnf-4.11.1-2.fc37.noarch.rpm 19 MB/s | 454 kB 00:00 (14/137): coreutils-common-9.0-5.fc37.x86_64.rp 22 MB/s | 2.0 MB 00:00 (15/137): dnf-plugins-core-4.1.0-1.fc37.noarch. 2.3 MB/s | 34 kB 00:00 (16/137): elfutils-default-yama-scope-0.186-5.f 1.1 MB/s | 16 kB 00:00 (17/137): elfutils-libelf-0.186-5.fc37.x86_64.r 11 MB/s | 197 kB 00:00 (18/137): expat-2.4.8-1.fc37.x86_64.rpm 6.1 MB/s | 109 kB 00:00 (19/137): elfutils-libs-0.186-5.fc37.x86_64.rpm 12 MB/s | 255 kB 00:00 (20/137): fedora-gpg-keys-37-0.1.noarch.rpm 6.6 MB/s | 115 kB 00:00 (21/137): fedora-release-37-0.3.noarch.rpm 751 kB/s | 12 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| 1.1 MB 00:00 (37/137): gnupg2-2.3.4-2.fc36.x86_64.rpm 29 MB/s | 2.5 MB 00:00 (38/137): gpgme-1.17.0-2.fc37.x86_64.rpm 3.3 MB/s | 211 kB 00:00 (39/137): grep-3.7-2.fc36.x86_64.rpm 14 MB/s | 263 kB 00:00 (40/137): ima-evm-utils-1.4-5.fc36.x86_64.rpm 3.8 MB/s | 63 kB 00:00 (41/137): json-c-0.15-3.fc36.x86_64.rpm 1.9 MB/s | 43 kB 00:00 (42/137): keyutils-libs-1.6.1-4.fc36.x86_64.rpm 2.1 MB/s | 31 kB 00:00 (43/137): libacl-2.3.1-3.fc36.x86_64.rpm 1.2 MB/s | 24 kB 00:00 (44/137): krb5-libs-1.19.2-9.fc37.x86_64.rpm 21 MB/s | 724 kB 00:00 (45/137): libarchive-3.6.1-1.fc37.x86_64.rpm 16 MB/s | 397 kB 00:00 (46/137): libattr-2.5.1-4.fc36.x86_64.rpm 1.2 MB/s | 18 kB 00:00 (47/137): libblkid-2.38-2.fc37.x86_64.rpm 6.4 MB/s | 104 kB 00:00 (48/137): libassuan-2.5.5-4.fc36.x86_64.rpm 2.3 MB/s | 67 kB 00:00 (49/137): libcap-2.48-4.fc36.x86_64.rpm 3.2 MB/s | 67 kB 00:00 (50/137): libbrotli-1.0.9-7.fc36.x86_64.rpm 12 MB/s | 316 kB 00:00 (51/137): libcap-ng-0.8.3-1.fc37.x86_64.rpm 1.2 MB/s | 33 kB 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| 71 kB 00:00 (67/137): libgpg-error-1.45-1.fc37.x86_64.rpm 3.3 MB/s | 221 kB 00:00 (68/137): libnsl2-2.0.0-3.fc36.x86_64.rpm 1.3 MB/s | 30 kB 00:00 (69/137): libreport-filesystem-2.17.1-1.fc37.no 579 kB/s | 14 kB 00:00 (70/137): libselinux-3.3-4.fc36.x86_64.rpm 5.1 MB/s | 85 kB 00:00 (71/137): librepo-1.14.2-2.fc36.x86_64.rpm 2.0 MB/s | 95 kB 00:00 (72/137): libsemanage-3.3-3.fc37.x86_64.rpm 6.6 MB/s | 119 kB 00:00 (73/137): libsigsegv-2.14-2.fc36.x86_64.rpm 1.4 MB/s | 27 kB 00:00 (74/137): libsmartcols-2.38-2.fc37.x86_64.rpm 3.1 MB/s | 61 kB 00:00 (75/137): libsepol-3.3-3.fc36.x86_64.rpm 3.8 MB/s | 309 kB 00:00 (76/137): libsolv-0.7.21-1.fc37.x86_64.rpm 13 MB/s | 405 kB 00:00 (77/137): libssh-config-0.9.6-4.fc36.noarch.rpm 318 kB/s | 7.6 kB 00:00 (78/137): libssh-0.9.6-4.fc36.x86_64.rpm 1.8 MB/s | 203 kB 00:00 (79/137): libstdc++-12.0.1-0.15.fc37.x86_64.rpm 8.3 MB/s | 771 kB 00:00 (80/137): libtasn1-4.18.0-2.fc36.x86_64.rpm 2.1 MB/s | 75 kB 00:00 (81/137): libtirpc-1.3.2-1.rc1.fc36.1.x86_64.rp 3.2 MB/s | 94 kB 00:00 (82/137): libuuid-2.38-2.fc37.x86_64.rpm 995 kB/s | 25 kB 00:00 (83/137): libverto-0.3.2-3.fc36.x86_64.rpm 824 kB/s | 21 kB 00:00 (84/137): libxcrypt-4.4.28-1.fc37.x86_64.rpm 3.4 MB/s | 119 kB 00:00 (85/137): libunistring-1.0-1.fc36.x86_64.rpm 4.0 MB/s | 551 kB 00:00 (86/137): libyaml-0.2.5-7.fc36.x86_64.rpm 2.7 MB/s | 60 kB 00:00 (87/137): libxml2-2.9.13-1.fc37.x86_64.rpm 10 MB/s | 754 kB 00:00 (88/137): lua-libs-5.4.4-2.fc37.x86_64.rpm 6.4 MB/s | 217 kB 00:00 (89/137): lz4-libs-1.9.3-4.fc36.x86_64.rpm 2.8 MB/s | 70 kB 00:00 (90/137): mpdecimal-2.5.1-3.fc36.x86_64.rpm 3.4 MB/s | 102 kB 00:00 (91/137): mpfr-4.1.0-9.fc36.x86_64.rpm 4.7 MB/s | 333 kB 00:00 (92/137): libzstd-1.5.2-1.fc36.x86_64.rpm 1.5 MB/s | 295 kB 00:00 (93/137): ncurses-libs-6.2-9.20210508.fc36.x86_ 2.8 MB/s | 326 kB 00:00 (94/137): libpsl-0.21.1-5.fc36.x86_64.rpm 82 kB/s | 64 kB 00:00 (95/137): nettle-3.7.3-3.fc36.x86_64.rpm 5.0 MB/s | 399 kB 00:00 (96/137): openldap-2.6.1-2.fc36.x86_64.rpm 4.7 MB/s | 254 kB 00:00 (97/137): npth-1.6-8.fc36.x86_64.rpm 206 kB/s | 24 kB 00:00 (98/137): openldap-compat-2.6.1-2.fc36.x86_64.r 715 kB/s | 18 kB 00:00 (99/137): p11-kit-0.24.1-2.fc36.x86_64.rpm 4.5 MB/s | 362 kB 00:00 (100/137): ncurses-base-6.2-9.20210508.fc36.noa 144 kB/s | 60 kB 00:00 (101/137): p11-kit-trust-0.24.1-2.fc36.x86_64.r 2.2 MB/s | 138 kB 00:00 (102/137): pcre2-10.39-1.fc36.1.x86_64.rpm 5.0 MB/s | 231 kB 00:00 (103/137): pcre-8.45-1.fc36.1.x86_64.rpm 1.3 MB/s | 203 kB 00:00 (104/137): popt-1.18-7.fc36.x86_64.rpm 883 kB/s | 59 kB 00:00 (105/137): publicsuffix-list-dafsa-20210518-4.f 1.2 MB/s | 58 kB 00:00 (106/137): pcre2-syntax-10.39-1.fc36.1.noarch.r 411 kB/s | 143 kB 00:00 (107/137): python-setuptools-wheel-60.9.3-1.fc3 5.5 MB/s | 608 kB 00:00 (108/137): python3-3.10.4-1.fc37.x86_64.rpm 981 kB/s | 27 kB 00:00 (109/137): python3-dateutil-2.8.2-1.fc37.noarch 5.5 MB/s | 309 kB 00:00 (110/137): python3-dbus-1.2.18-3.fc36.x86_64.rp 4.2 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00:00 (125/137): rpm-sign-libs-4.17.0-10.fc37.x86_64. 1.7 MB/s | 27 kB 00:00 (126/137): sed-4.8-10.fc36.x86_64.rpm 4.6 MB/s | 297 kB 00:00 (127/137): setup-2.13.9.1-3.fc36.noarch.rpm 6.3 MB/s | 143 kB 00:00 (128/137): shadow-utils-4.11.1-2.fc37.x86_64.rp 15 MB/s | 1.1 MB 00:00 (129/137): sqlite-libs-3.38.2-1.fc37.x86_64.rpm 14 MB/s | 654 kB 00:00 (130/137): openssl-libs-3.0.2-2.fc37.x86_64.rpm 1.5 MB/s | 2.1 MB 00:01 (131/137): python3-libs-3.10.4-1.fc37.x86_64.rp 15 MB/s | 7.4 MB 00:00 (132/137): systemd-libs-251~rc1-3.fc37.x86_64.r 16 MB/s | 616 kB 00:00 (133/137): xz-libs-5.2.5-8.fc36.x86_64.rpm 5.2 MB/s | 93 kB 00:00 (134/137): tzdata-2022a-1.fc37.noarch.rpm 15 MB/s | 432 kB 00:00 (135/137): zchunk-libs-1.2.1-1.fc37.x86_64.rpm 3.2 MB/s | 50 kB 00:00 (136/137): zlib-1.2.11-31.fc36.x86_64.rpm 5.7 MB/s | 91 kB 00:00 (137/137): tpm2-tss-3.2.0-1.fc37.x86_64.rpm 5.9 MB/s | 596 kB 00:00 -------------------------------------------------------------------------------- Total 16 MB/s | 52 MB 00:03 fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary (0x5323552A) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x38AB71F4: Userid : "Fedora (36) " Fingerprint: 53DE D2CB 922D 8B8D 9E63 FD18 999F 7CBF 38AB 71F4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-36-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.16-2.fc36.x86_64 1/1 Preparing : 1/1 Installing : libgcc-12.0.1-0.15.fc37.x86_64 1/137 Running scriptlet: libgcc-12.0.1-0.15.fc37.x86_64 1/137 Installing : crypto-policies-20220412-1.git97fe449.fc37.noarc 2/137 Running scriptlet: crypto-policies-20220412-1.git97fe449.fc37.noarc 2/137 Installing : tzdata-2022a-1.fc37.noarch 3/137 Installing : fedora-release-identity-basic-37-0.3.noarch 4/137 Installing : python-setuptools-wheel-60.9.3-1.fc37.noarch 5/137 Installing : publicsuffix-list-dafsa-20210518-4.fc36.noarch 6/137 Installing : pcre2-syntax-10.39-1.fc36.1.noarch 7/137 Installing : ncurses-base-6.2-9.20210508.fc36.noarch 8/137 Installing : libssh-config-0.9.6-4.fc36.noarch 9/137 Installing : libreport-filesystem-2.17.1-1.fc37.noarch 10/137 Installing : dnf-data-4.11.1-2.fc37.noarch 11/137 warning: /etc/dnf/dnf.conf created as /etc/dnf/dnf.conf.rpmnew Installing : fedora-gpg-keys-37-0.1.noarch 12/137 Installing : 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Installing : tpm2-tss-3.2.0-1.fc37.x86_64 122/137 Installing : ima-evm-utils-1.4-5.fc36.x86_64 123/137 Installing : openldap-compat-2.6.1-2.fc36.x86_64 124/137 Installing : gnupg2-2.3.4-2.fc36.x86_64 125/137 Installing : gpgme-1.17.0-2.fc37.x86_64 126/137 Installing : librepo-1.14.2-2.fc36.x86_64 127/137 Installing : libdnf-0.66.0-1.fc37.x86_64 128/137 Installing : python3-libdnf-0.66.0-1.fc37.x86_64 129/137 Installing : python3-hawkey-0.66.0-1.fc37.x86_64 130/137 Installing : python3-gpg-1.17.0-2.fc37.x86_64 131/137 Installing : rpm-sign-libs-4.17.0-10.fc37.x86_64 132/137 Installing : python3-rpm-4.17.0-10.fc37.x86_64 133/137 Installing : python3-dnf-4.11.1-2.fc37.noarch 134/137 Installing : python3-dnf-plugins-core-4.1.0-1.fc37.noarch 135/137 Installing : dnf-plugins-core-4.1.0-1.fc37.noarch 136/137 Installing : dnf-4.11.1-2.fc37.noarch 137/137 Running scriptlet: dnf-4.11.1-2.fc37.noarch 137/137 Running scriptlet: filesystem-3.16-2.fc36.x86_64 137/137 Running scriptlet: ca-certificates-2021.2.52-3.fc36.noarch 137/137 Running scriptlet: rpm-4.17.0-10.fc37.x86_64 137/137 Running scriptlet: dnf-4.11.1-2.fc37.noarch 137/137 Verifying : alternatives-1.19-2.fc36.x86_64 1/137 Verifying : audit-libs-3.0.8-1.fc37.x86_64 2/137 Verifying : basesystem-11-13.fc36.noarch 3/137 Verifying : bash-5.1.16-2.fc36.x86_64 4/137 Verifying : bzip2-libs-1.0.8-11.fc36.x86_64 5/137 Verifying : ca-certificates-2021.2.52-3.fc36.noarch 6/137 Verifying : coreutils-9.0-5.fc37.x86_64 7/137 Verifying : coreutils-common-9.0-5.fc37.x86_64 8/137 Verifying : crypto-policies-20220412-1.git97fe449.fc37.noarc 9/137 Verifying : curl-7.82.0-2.fc37.x86_64 10/137 Verifying : cyrus-sasl-lib-2.1.28-1.fc37.x86_64 11/137 Verifying : dbus-libs-1:1.14.0-1.fc37.x86_64 12/137 Verifying : dnf-4.11.1-2.fc37.noarch 13/137 Verifying : dnf-data-4.11.1-2.fc37.noarch 14/137 Verifying : dnf-plugins-core-4.1.0-1.fc37.noarch 15/137 Verifying : elfutils-default-yama-scope-0.186-5.fc37.noarch 16/137 Verifying : elfutils-libelf-0.186-5.fc37.x86_64 17/137 Verifying : elfutils-libs-0.186-5.fc37.x86_64 18/137 Verifying : expat-2.4.8-1.fc37.x86_64 19/137 Verifying : fedora-gpg-keys-37-0.1.noarch 20/137 Verifying : fedora-release-37-0.3.noarch 21/137 Verifying : fedora-release-common-37-0.3.noarch 22/137 Verifying : fedora-release-identity-basic-37-0.3.noarch 23/137 Verifying : fedora-repos-37-0.1.noarch 24/137 Verifying : fedora-repos-rawhide-37-0.1.noarch 25/137 Verifying : file-libs-5.41-5.fc37.x86_64 26/137 Verifying : filesystem-3.16-2.fc36.x86_64 27/137 Verifying : findutils-1:4.9.0-1.fc36.x86_64 28/137 Verifying : gawk-5.1.1-3.fc37.x86_64 29/137 Verifying : gdbm-libs-1:1.22-2.fc36.x86_64 30/137 Verifying : glib2-2.72.0-1.fc37.x86_64 31/137 Verifying : glibc-2.35.9000-12.fc37.x86_64 32/137 Verifying : glibc-common-2.35.9000-12.fc37.x86_64 33/137 Verifying : glibc-minimal-langpack-2.35.9000-12.fc37.x86_64 34/137 Verifying : gmp-1:6.2.1-2.fc36.x86_64 35/137 Verifying : gnupg2-2.3.4-2.fc36.x86_64 36/137 Verifying : gnutls-3.7.3-2.fc36.x86_64 37/137 Verifying : gpgme-1.17.0-2.fc37.x86_64 38/137 Verifying : grep-3.7-2.fc36.x86_64 39/137 Verifying : ima-evm-utils-1.4-5.fc36.x86_64 40/137 Verifying : json-c-0.15-3.fc36.x86_64 41/137 Verifying : keyutils-libs-1.6.1-4.fc36.x86_64 42/137 Verifying : krb5-libs-1.19.2-9.fc37.x86_64 43/137 Verifying : libacl-2.3.1-3.fc36.x86_64 44/137 Verifying : libarchive-3.6.1-1.fc37.x86_64 45/137 Verifying : libassuan-2.5.5-4.fc36.x86_64 46/137 Verifying : libattr-2.5.1-4.fc36.x86_64 47/137 Verifying : libblkid-2.38-2.fc37.x86_64 48/137 Verifying : libbrotli-1.0.9-7.fc36.x86_64 49/137 Verifying : libcap-2.48-4.fc36.x86_64 50/137 Verifying : libcap-ng-0.8.3-1.fc37.x86_64 51/137 Verifying : libcom_err-1.46.5-2.fc36.x86_64 52/137 Verifying : libcomps-0.1.18-2.fc36.x86_64 53/137 Verifying : libcurl-7.82.0-2.fc37.x86_64 54/137 Verifying : libdnf-0.66.0-1.fc37.x86_64 55/137 Verifying : libevent-2.1.12-6.fc36.x86_64 56/137 Verifying : libffi-3.4.2-8.fc36.x86_64 57/137 Verifying : libfsverity-1.4-7.fc36.x86_64 58/137 Verifying : libgcc-12.0.1-0.15.fc37.x86_64 59/137 Verifying : libgcrypt-1.10.1-2.fc37.x86_64 60/137 Verifying : libgomp-12.0.1-0.15.fc37.x86_64 61/137 Verifying : libgpg-error-1.45-1.fc37.x86_64 62/137 Verifying : libidn2-2.3.2-4.fc36.x86_64 63/137 Verifying : libksba-1.6.0-3.fc36.x86_64 64/137 Verifying : libmodulemd-2.14.0-2.fc36.x86_64 65/137 Verifying : libmount-2.38-2.fc37.x86_64 66/137 Verifying : libnghttp2-1.47.0-1.fc37.x86_64 67/137 Verifying : libnsl2-2.0.0-3.fc36.x86_64 68/137 Verifying : libpsl-0.21.1-5.fc36.x86_64 69/137 Verifying : librepo-1.14.2-2.fc36.x86_64 70/137 Verifying : libreport-filesystem-2.17.1-1.fc37.noarch 71/137 Verifying : libselinux-3.3-4.fc36.x86_64 72/137 Verifying : libsemanage-3.3-3.fc37.x86_64 73/137 Verifying : libsepol-3.3-3.fc36.x86_64 74/137 Verifying : libsigsegv-2.14-2.fc36.x86_64 75/137 Verifying : libsmartcols-2.38-2.fc37.x86_64 76/137 Verifying : libsolv-0.7.21-1.fc37.x86_64 77/137 Verifying : libssh-0.9.6-4.fc36.x86_64 78/137 Verifying : libssh-config-0.9.6-4.fc36.noarch 79/137 Verifying : libstdc++-12.0.1-0.15.fc37.x86_64 80/137 Verifying : libtasn1-4.18.0-2.fc36.x86_64 81/137 Verifying : libtirpc-1.3.2-1.rc1.fc36.1.x86_64 82/137 Verifying : libunistring-1.0-1.fc36.x86_64 83/137 Verifying : libuuid-2.38-2.fc37.x86_64 84/137 Verifying : libverto-0.3.2-3.fc36.x86_64 85/137 Verifying : libxcrypt-4.4.28-1.fc37.x86_64 86/137 Verifying : libxml2-2.9.13-1.fc37.x86_64 87/137 Verifying : libyaml-0.2.5-7.fc36.x86_64 88/137 Verifying : libzstd-1.5.2-1.fc36.x86_64 89/137 Verifying : lua-libs-5.4.4-2.fc37.x86_64 90/137 Verifying : lz4-libs-1.9.3-4.fc36.x86_64 91/137 Verifying : mpdecimal-2.5.1-3.fc36.x86_64 92/137 Verifying : mpfr-4.1.0-9.fc36.x86_64 93/137 Verifying : ncurses-base-6.2-9.20210508.fc36.noarch 94/137 Verifying : ncurses-libs-6.2-9.20210508.fc36.x86_64 95/137 Verifying : nettle-3.7.3-3.fc36.x86_64 96/137 Verifying : npth-1.6-8.fc36.x86_64 97/137 Verifying : openldap-2.6.1-2.fc36.x86_64 98/137 Verifying : openldap-compat-2.6.1-2.fc36.x86_64 99/137 Verifying : openssl-libs-1:3.0.2-2.fc37.x86_64 100/137 Verifying : p11-kit-0.24.1-2.fc36.x86_64 101/137 Verifying : p11-kit-trust-0.24.1-2.fc36.x86_64 102/137 Verifying : pcre-8.45-1.fc36.1.x86_64 103/137 Verifying : pcre2-10.39-1.fc36.1.x86_64 104/137 Verifying : pcre2-syntax-10.39-1.fc36.1.noarch 105/137 Verifying : popt-1.18-7.fc36.x86_64 106/137 Verifying : publicsuffix-list-dafsa-20210518-4.fc36.noarch 107/137 Verifying : python-pip-wheel-22.0.4-1.fc37.noarch 108/137 Verifying : python-setuptools-wheel-60.9.3-1.fc37.noarch 109/137 Verifying : python3-3.10.4-1.fc37.x86_64 110/137 Verifying : python3-dateutil-1:2.8.2-1.fc37.noarch 111/137 Verifying : python3-dbus-1.2.18-3.fc36.x86_64 112/137 Verifying : python3-distro-1.7.0-1.fc37.noarch 113/137 Verifying : python3-dnf-4.11.1-2.fc37.noarch 114/137 Verifying : python3-dnf-plugins-core-4.1.0-1.fc37.noarch 115/137 Verifying : python3-gpg-1.17.0-2.fc37.x86_64 116/137 Verifying : python3-hawkey-0.66.0-1.fc37.x86_64 117/137 Verifying : python3-libcomps-0.1.18-2.fc36.x86_64 118/137 Verifying : python3-libdnf-0.66.0-1.fc37.x86_64 119/137 Verifying : python3-libs-3.10.4-1.fc37.x86_64 120/137 Verifying : python3-rpm-4.17.0-10.fc37.x86_64 121/137 Verifying : python3-six-1.16.0-5.fc36.noarch 122/137 Verifying : readline-8.1-6.fc36.x86_64 123/137 Verifying : rpm-4.17.0-10.fc37.x86_64 124/137 Verifying : rpm-build-libs-4.17.0-10.fc37.x86_64 125/137 Verifying : rpm-libs-4.17.0-10.fc37.x86_64 126/137 Verifying : rpm-sign-libs-4.17.0-10.fc37.x86_64 127/137 Verifying : sed-4.8-10.fc36.x86_64 128/137 Verifying : setup-2.13.9.1-3.fc36.noarch 129/137 Verifying : shadow-utils-2:4.11.1-2.fc37.x86_64 130/137 Verifying : sqlite-libs-3.38.2-1.fc37.x86_64 131/137 Verifying : systemd-libs-251~rc1-3.fc37.x86_64 132/137 Verifying : tpm2-tss-3.2.0-1.fc37.x86_64 133/137 Verifying : tzdata-2022a-1.fc37.noarch 134/137 Verifying : xz-libs-5.2.5-8.fc36.x86_64 135/137 Verifying : zchunk-libs-1.2.1-1.fc37.x86_64 136/137 Verifying : zlib-1.2.11-31.fc36.x86_64 137/137 Installed products updated. Installed: alternatives-1.19-2.fc36.x86_64 audit-libs-3.0.8-1.fc37.x86_64 basesystem-11-13.fc36.noarch bash-5.1.16-2.fc36.x86_64 bzip2-libs-1.0.8-11.fc36.x86_64 ca-certificates-2021.2.52-3.fc36.noarch coreutils-9.0-5.fc37.x86_64 coreutils-common-9.0-5.fc37.x86_64 crypto-policies-20220412-1.git97fe449.fc37.noarch curl-7.82.0-2.fc37.x86_64 cyrus-sasl-lib-2.1.28-1.fc37.x86_64 dbus-libs-1:1.14.0-1.fc37.x86_64 dnf-4.11.1-2.fc37.noarch dnf-data-4.11.1-2.fc37.noarch dnf-plugins-core-4.1.0-1.fc37.noarch elfutils-default-yama-scope-0.186-5.fc37.noarch elfutils-libelf-0.186-5.fc37.x86_64 elfutils-libs-0.186-5.fc37.x86_64 expat-2.4.8-1.fc37.x86_64 fedora-gpg-keys-37-0.1.noarch fedora-release-37-0.3.noarch fedora-release-common-37-0.3.noarch fedora-release-identity-basic-37-0.3.noarch fedora-repos-37-0.1.noarch fedora-repos-rawhide-37-0.1.noarch file-libs-5.41-5.fc37.x86_64 filesystem-3.16-2.fc36.x86_64 findutils-1:4.9.0-1.fc36.x86_64 gawk-5.1.1-3.fc37.x86_64 gdbm-libs-1:1.22-2.fc36.x86_64 glib2-2.72.0-1.fc37.x86_64 glibc-2.35.9000-12.fc37.x86_64 glibc-common-2.35.9000-12.fc37.x86_64 glibc-minimal-langpack-2.35.9000-12.fc37.x86_64 gmp-1:6.2.1-2.fc36.x86_64 gnupg2-2.3.4-2.fc36.x86_64 gnutls-3.7.3-2.fc36.x86_64 gpgme-1.17.0-2.fc37.x86_64 grep-3.7-2.fc36.x86_64 ima-evm-utils-1.4-5.fc36.x86_64 json-c-0.15-3.fc36.x86_64 keyutils-libs-1.6.1-4.fc36.x86_64 krb5-libs-1.19.2-9.fc37.x86_64 libacl-2.3.1-3.fc36.x86_64 libarchive-3.6.1-1.fc37.x86_64 libassuan-2.5.5-4.fc36.x86_64 libattr-2.5.1-4.fc36.x86_64 libblkid-2.38-2.fc37.x86_64 libbrotli-1.0.9-7.fc36.x86_64 libcap-2.48-4.fc36.x86_64 libcap-ng-0.8.3-1.fc37.x86_64 libcom_err-1.46.5-2.fc36.x86_64 libcomps-0.1.18-2.fc36.x86_64 libcurl-7.82.0-2.fc37.x86_64 libdnf-0.66.0-1.fc37.x86_64 libevent-2.1.12-6.fc36.x86_64 libffi-3.4.2-8.fc36.x86_64 libfsverity-1.4-7.fc36.x86_64 libgcc-12.0.1-0.15.fc37.x86_64 libgcrypt-1.10.1-2.fc37.x86_64 libgomp-12.0.1-0.15.fc37.x86_64 libgpg-error-1.45-1.fc37.x86_64 libidn2-2.3.2-4.fc36.x86_64 libksba-1.6.0-3.fc36.x86_64 libmodulemd-2.14.0-2.fc36.x86_64 libmount-2.38-2.fc37.x86_64 libnghttp2-1.47.0-1.fc37.x86_64 libnsl2-2.0.0-3.fc36.x86_64 libpsl-0.21.1-5.fc36.x86_64 librepo-1.14.2-2.fc36.x86_64 libreport-filesystem-2.17.1-1.fc37.noarch libselinux-3.3-4.fc36.x86_64 libsemanage-3.3-3.fc37.x86_64 libsepol-3.3-3.fc36.x86_64 libsigsegv-2.14-2.fc36.x86_64 libsmartcols-2.38-2.fc37.x86_64 libsolv-0.7.21-1.fc37.x86_64 libssh-0.9.6-4.fc36.x86_64 libssh-config-0.9.6-4.fc36.noarch libstdc++-12.0.1-0.15.fc37.x86_64 libtasn1-4.18.0-2.fc36.x86_64 libtirpc-1.3.2-1.rc1.fc36.1.x86_64 libunistring-1.0-1.fc36.x86_64 libuuid-2.38-2.fc37.x86_64 libverto-0.3.2-3.fc36.x86_64 libxcrypt-4.4.28-1.fc37.x86_64 libxml2-2.9.13-1.fc37.x86_64 libyaml-0.2.5-7.fc36.x86_64 libzstd-1.5.2-1.fc36.x86_64 lua-libs-5.4.4-2.fc37.x86_64 lz4-libs-1.9.3-4.fc36.x86_64 mpdecimal-2.5.1-3.fc36.x86_64 mpfr-4.1.0-9.fc36.x86_64 ncurses-base-6.2-9.20210508.fc36.noarch ncurses-libs-6.2-9.20210508.fc36.x86_64 nettle-3.7.3-3.fc36.x86_64 npth-1.6-8.fc36.x86_64 openldap-2.6.1-2.fc36.x86_64 openldap-compat-2.6.1-2.fc36.x86_64 openssl-libs-1:3.0.2-2.fc37.x86_64 p11-kit-0.24.1-2.fc36.x86_64 p11-kit-trust-0.24.1-2.fc36.x86_64 pcre-8.45-1.fc36.1.x86_64 pcre2-10.39-1.fc36.1.x86_64 pcre2-syntax-10.39-1.fc36.1.noarch popt-1.18-7.fc36.x86_64 publicsuffix-list-dafsa-20210518-4.fc36.noarch python-pip-wheel-22.0.4-1.fc37.noarch python-setuptools-wheel-60.9.3-1.fc37.noarch python3-3.10.4-1.fc37.x86_64 python3-dateutil-1:2.8.2-1.fc37.noarch python3-dbus-1.2.18-3.fc36.x86_64 python3-distro-1.7.0-1.fc37.noarch python3-dnf-4.11.1-2.fc37.noarch python3-dnf-plugins-core-4.1.0-1.fc37.noarch python3-gpg-1.17.0-2.fc37.x86_64 python3-hawkey-0.66.0-1.fc37.x86_64 python3-libcomps-0.1.18-2.fc36.x86_64 python3-libdnf-0.66.0-1.fc37.x86_64 python3-libs-3.10.4-1.fc37.x86_64 python3-rpm-4.17.0-10.fc37.x86_64 python3-six-1.16.0-5.fc36.noarch readline-8.1-6.fc36.x86_64 rpm-4.17.0-10.fc37.x86_64 rpm-build-libs-4.17.0-10.fc37.x86_64 rpm-libs-4.17.0-10.fc37.x86_64 rpm-sign-libs-4.17.0-10.fc37.x86_64 sed-4.8-10.fc36.x86_64 setup-2.13.9.1-3.fc36.noarch shadow-utils-2:4.11.1-2.fc37.x86_64 sqlite-libs-3.38.2-1.fc37.x86_64 systemd-libs-251~rc1-3.fc37.x86_64 tpm2-tss-3.2.0-1.fc37.x86_64 tzdata-2022a-1.fc37.noarch xz-libs-5.2.5-8.fc36.x86_64 zchunk-libs-1.2.1-1.fc37.x86_64 zlib-1.2.11-31.fc36.x86_64 Complete! Finish(bootstrap): dnf install Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.0 INFO: Mock Version: 3.0 Start: dnf install No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 36 kB/s | 3.6 kB 00:00 fedora 152 kB/s | 12 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash x86_64 5.1.16-2.fc36 fedora 1.7 M bzip2 x86_64 1.0.8-11.fc36 fedora 52 k coreutils x86_64 9.0-5.fc37 fedora 1.1 M cpio x86_64 2.13-12.fc36 fedora 270 k diffutils x86_64 3.8-2.fc36 fedora 370 k fedora-release-common noarch 37-0.3 fedora 22 k findutils x86_64 1:4.9.0-1.fc36 fedora 483 k gawk x86_64 5.1.1-3.fc37 fedora 1.0 M glibc-minimal-langpack x86_64 2.35.9000-12.fc37 fedora 57 k grep x86_64 3.7-2.fc36 fedora 263 k gzip x86_64 1.12-1.fc37 fedora 159 k info x86_64 6.8-3.fc36 fedora 225 k patch x86_64 2.7.6-16.fc36 fedora 124 k redhat-rpm-config noarch 214-1.fc37 fedora 68 k rpm-build x86_64 4.17.0-10.fc37 fedora 61 k sed x86_64 4.8-10.fc36 fedora 297 k shadow-utils x86_64 2:4.11.1-2.fc37 fedora 1.1 M tar x86_64 2:1.34-3.fc36 fedora 877 k unzip x86_64 6.0-57.fc36 fedora 182 k util-linux x86_64 2.38-2.fc37 fedora 2.3 M which x86_64 2.21-33.fc37 fedora 42 k xz x86_64 5.2.5-8.fc36 fedora 214 k Installing dependencies: alternatives x86_64 1.19-2.fc36 fedora 36 k audit-libs x86_64 3.0.8-1.fc37 fedora 116 k authselect x86_64 1.3.0-10.fc37 fedora 135 k authselect-libs x86_64 1.3.0-10.fc37 fedora 223 k basesystem noarch 11-13.fc36 fedora 7.0 k binutils x86_64 2.38-8.fc37 fedora 5.4 M binutils-gold x86_64 2.38-8.fc37 fedora 754 k bzip2-libs x86_64 1.0.8-11.fc36 fedora 41 k ca-certificates noarch 2021.2.52-3.fc36 fedora 367 k coreutils-common x86_64 9.0-5.fc37 fedora 2.0 M cracklib x86_64 2.9.6-28.fc36 fedora 81 k crypto-policies noarch 20220412-1.git97fe449.fc37 fedora 58 k curl x86_64 7.82.0-2.fc37 fedora 309 k cyrus-sasl-lib x86_64 2.1.28-1.fc37 fedora 793 k debugedit x86_64 5.0-3.fc36 fedora 77 k dwz x86_64 0.14-2.fc35 fedora 127 k ed x86_64 1.14.2-12.fc36 fedora 73 k efi-srpm-macros noarch 5-5.fc36 fedora 22 k elfutils x86_64 0.186-5.fc37 fedora 521 k elfutils-debuginfod-client x86_64 0.186-5.fc37 fedora 38 k elfutils-default-yama-scope noarch 0.186-5.fc37 fedora 16 k elfutils-libelf x86_64 0.186-5.fc37 fedora 197 k elfutils-libs x86_64 0.186-5.fc37 fedora 255 k fedora-gpg-keys noarch 37-0.1 fedora 115 k fedora-release noarch 37-0.3 fedora 12 k fedora-release-identity-basic noarch 37-0.3 fedora 13 k fedora-repos noarch 37-0.1 fedora 11 k fedora-repos-rawhide noarch 37-0.1 fedora 10 k file x86_64 5.41-5.fc37 fedora 48 k file-libs x86_64 5.41-5.fc37 fedora 635 k filesystem x86_64 3.16-2.fc36 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-7.fc36 fedora 27 k fpc-srpm-macros noarch 1.3-5.fc36 fedora 7.6 k gdb-minimal x86_64 11.2-3.fc37 fedora 3.8 M gdbm-libs x86_64 1:1.22-2.fc36 fedora 58 k ghc-srpm-macros noarch 1.5.0-6.fc36 fedora 7.7 k glibc x86_64 2.35.9000-12.fc37 fedora 2.1 M glibc-common x86_64 2.35.9000-12.fc37 fedora 336 k glibc-gconv-extra x86_64 2.35.9000-12.fc37 fedora 1.6 M gmp x86_64 1:6.2.1-2.fc36 fedora 315 k gnat-srpm-macros noarch 4-15.fc36 fedora 8.2 k go-srpm-macros noarch 3.0.15-1.fc36 fedora 26 k kernel-srpm-macros noarch 1.0-14.fc36 fedora 9.1 k keyutils-libs x86_64 1.6.1-4.fc36 fedora 31 k krb5-libs x86_64 1.19.2-9.fc37 fedora 724 k libacl x86_64 2.3.1-3.fc36 fedora 24 k libarchive x86_64 3.6.1-1.fc37 fedora 397 k libattr x86_64 2.5.1-4.fc36 fedora 18 k libblkid x86_64 2.38-2.fc37 fedora 104 k libbrotli x86_64 1.0.9-7.fc36 fedora 316 k libcap x86_64 2.48-4.fc36 fedora 67 k libcap-ng x86_64 0.8.3-1.fc37 fedora 33 k libcom_err x86_64 1.46.5-2.fc36 fedora 25 k libcurl x86_64 7.82.0-2.fc37 fedora 299 k libdb x86_64 5.3.28-52.fc37 fedora 764 k libeconf x86_64 0.4.0-3.fc36 fedora 27 k libevent x86_64 2.1.12-6.fc36 fedora 261 k libfdisk x86_64 2.38-2.fc37 fedora 157 k libffi x86_64 3.4.2-8.fc36 fedora 37 k libgcc x86_64 12.0.1-0.15.fc37 fedora 101 k libgcrypt x86_64 1.10.1-2.fc37 fedora 511 k libgomp x86_64 12.0.1-0.15.fc37 fedora 287 k libgpg-error x86_64 1.45-1.fc37 fedora 221 k libidn2 x86_64 2.3.2-4.fc36 fedora 103 k libmount x86_64 2.38-2.fc37 fedora 132 k libnghttp2 x86_64 1.47.0-1.fc37 fedora 71 k libnsl2 x86_64 2.0.0-3.fc36 fedora 30 k libpkgconf x86_64 1.8.0-2.fc36 fedora 36 k libpsl x86_64 0.21.1-5.fc36 fedora 64 k libpwquality x86_64 1.4.4-7.fc36 fedora 104 k libselinux x86_64 3.3-4.fc36 fedora 85 k libsemanage x86_64 3.3-3.fc37 fedora 119 k libsepol x86_64 3.3-3.fc36 fedora 309 k libsigsegv x86_64 2.14-2.fc36 fedora 27 k libsmartcols x86_64 2.38-2.fc37 fedora 61 k libssh x86_64 0.9.6-4.fc36 fedora 203 k libssh-config noarch 0.9.6-4.fc36 fedora 7.6 k libstdc++ x86_64 12.0.1-0.15.fc37 fedora 771 k libtasn1 x86_64 4.18.0-2.fc36 fedora 75 k libtirpc x86_64 1.3.2-1.rc1.fc36.1 fedora 94 k libunistring x86_64 1.0-1.fc36 fedora 551 k libutempter x86_64 1.2.1-6.fc36 fedora 26 k libuuid x86_64 2.38-2.fc37 fedora 25 k libverto x86_64 0.3.2-3.fc36 fedora 21 k libxcrypt x86_64 4.4.28-1.fc37 fedora 119 k libxml2 x86_64 2.9.13-1.fc37 fedora 754 k libzstd x86_64 1.5.2-1.fc36 fedora 295 k lua-libs x86_64 5.4.4-2.fc37 fedora 217 k lua-srpm-macros noarch 1-6.fc36 fedora 8.5 k lz4-libs x86_64 1.9.3-4.fc36 fedora 70 k mpfr x86_64 4.1.0-9.fc36 fedora 333 k ncurses-base noarch 6.2-9.20210508.fc36 fedora 60 k ncurses-libs x86_64 6.2-9.20210508.fc36 fedora 326 k nim-srpm-macros noarch 3-6.fc36 fedora 8.3 k ocaml-srpm-macros noarch 6-6.fc36 fedora 7.7 k openblas-srpm-macros noarch 2-11.fc36 fedora 7.4 k openldap x86_64 2.6.1-2.fc36 fedora 254 k openssl-libs x86_64 1:3.0.2-2.fc37 fedora 2.1 M p11-kit x86_64 0.24.1-2.fc36 fedora 362 k p11-kit-trust x86_64 0.24.1-2.fc36 fedora 138 k package-notes-srpm-macros noarch 0.4-14.fc36 fedora 11 k pam x86_64 1.5.2-12.fc37 fedora 519 k pam-libs x86_64 1.5.2-12.fc37 fedora 59 k pcre x86_64 8.45-1.fc36.1 fedora 203 k pcre2 x86_64 10.39-1.fc36.1 fedora 231 k pcre2-syntax noarch 10.39-1.fc36.1 fedora 143 k perl-srpm-macros noarch 1-43.fc36 fedora 8.4 k pkgconf x86_64 1.8.0-2.fc36 fedora 41 k pkgconf-m4 noarch 1.8.0-2.fc36 fedora 14 k pkgconf-pkg-config x86_64 1.8.0-2.fc36 fedora 10 k popt x86_64 1.18-7.fc36 fedora 59 k publicsuffix-list-dafsa noarch 20210518-4.fc36 fedora 58 k python-srpm-macros noarch 3.10-17.fc36 fedora 26 k qt5-srpm-macros noarch 5.15.3-1.fc37 fedora 8.1 k readline x86_64 8.1-6.fc36 fedora 211 k rpm x86_64 4.17.0-10.fc37 fedora 540 k rpm-build-libs x86_64 4.17.0-10.fc37 fedora 94 k rpm-libs x86_64 4.17.0-10.fc37 fedora 316 k rpmautospec-rpm-macros noarch 0.2.5-1.fc35 fedora 9.9 k rust-srpm-macros noarch 21-1.fc37 fedora 9.2 k setup noarch 2.13.9.1-3.fc36 fedora 143 k sqlite-libs x86_64 3.38.2-1.fc37 fedora 654 k systemd-libs x86_64 251~rc1-3.fc37 fedora 616 k tzdata noarch 2022a-1.fc37 fedora 432 k util-linux-core x86_64 2.38-2.fc37 fedora 450 k xxhash-libs x86_64 0.8.1-2.fc36 fedora 42 k xz-libs x86_64 5.2.5-8.fc36 fedora 93 k zip x86_64 3.0-32.fc36 fedora 260 k zlib x86_64 1.2.11-31.fc36 fedora 91 k zstd x86_64 1.5.2-1.fc36 fedora 449 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 152 Packages Total size: 50 M Installed size: 176 M Downloading Packages: [SKIPPED] alternatives-1.19-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] audit-libs-3.0.8-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] authselect-1.3.0-10.fc37.x86_64.rpm: Already downloaded [SKIPPED] authselect-libs-1.3.0-10.fc37.x86_64.rpm: Already downloaded [SKIPPED] basesystem-11-13.fc36.noarch.rpm: Already downloaded [SKIPPED] bash-5.1.16-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] binutils-2.38-8.fc37.x86_64.rpm: Already downloaded [SKIPPED] binutils-gold-2.38-8.fc37.x86_64.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-11.fc36.x86_64.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-11.fc36.x86_64.rpm: Already downloaded [SKIPPED] ca-certificates-2021.2.52-3.fc36.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.0-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] coreutils-common-9.0-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] cpio-2.13-12.fc36.x86_64.rpm: Already downloaded [SKIPPED] cracklib-2.9.6-28.fc36.x86_64.rpm: Already downloaded [SKIPPED] crypto-policies-20220412-1.git97fe449.fc37.noarch.rpm: Already downloaded [SKIPPED] curl-7.82.0-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] debugedit-5.0-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] diffutils-3.8-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] dwz-0.14-2.fc35.x86_64.rpm: Already downloaded [SKIPPED] ed-1.14.2-12.fc36.x86_64.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-5.fc36.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.186-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.186-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.186-5.fc37.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.186-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] elfutils-libs-0.186-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-37-0.1.noarch.rpm: Already downloaded [SKIPPED] fedora-release-37-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-release-common-37-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-release-identity-basic-37-0.3.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-37-0.1.noarch.rpm: Already downloaded [SKIPPED] fedora-repos-rawhide-37-0.1.noarch.rpm: Already downloaded [SKIPPED] file-5.41-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] file-libs-5.41-5.fc37.x86_64.rpm: Already downloaded [SKIPPED] filesystem-3.16-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] findutils-4.9.0-1.fc36.x86_64.rpm: Already downloaded [SKIPPED] fonts-srpm-macros-2.0.5-7.fc36.noarch.rpm: Already downloaded [SKIPPED] fpc-srpm-macros-1.3-5.fc36.noarch.rpm: Already downloaded [SKIPPED] gawk-5.1.1-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] gdb-minimal-11.2-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] gdbm-libs-1.22-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] ghc-srpm-macros-1.5.0-6.fc36.noarch.rpm: Already downloaded [SKIPPED] glibc-2.35.9000-12.fc37.x86_64.rpm: Already downloaded [SKIPPED] glibc-common-2.35.9000-12.fc37.x86_64.rpm: Already downloaded [SKIPPED] glibc-gconv-extra-2.35.9000-12.fc37.x86_64.rpm: Already downloaded [SKIPPED] glibc-minimal-langpack-2.35.9000-12.fc37.x86_64.rpm: Already downloaded [SKIPPED] gmp-6.2.1-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] gnat-srpm-macros-4-15.fc36.noarch.rpm: Already downloaded [SKIPPED] go-srpm-macros-3.0.15-1.fc36.noarch.rpm: Already downloaded [SKIPPED] grep-3.7-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] gzip-1.12-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] info-6.8-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] kernel-srpm-macros-1.0-14.fc36.noarch.rpm: Already downloaded [SKIPPED] keyutils-libs-1.6.1-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] krb5-libs-1.19.2-9.fc37.x86_64.rpm: Already downloaded [SKIPPED] libacl-2.3.1-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] libarchive-3.6.1-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] libattr-2.5.1-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] libblkid-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libbrotli-1.0.9-7.fc36.x86_64.rpm: Already downloaded [SKIPPED] libcap-2.48-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.3-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] libcom_err-1.46.5-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] libcurl-7.82.0-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libdb-5.3.28-52.fc37.x86_64.rpm: Already downloaded [SKIPPED] libeconf-0.4.0-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] libevent-2.1.12-6.fc36.x86_64.rpm: Already downloaded [SKIPPED] libfdisk-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libffi-3.4.2-8.fc36.x86_64.rpm: Already downloaded [SKIPPED] libgcc-12.0.1-0.15.fc37.x86_64.rpm: Already downloaded [SKIPPED] libgcrypt-1.10.1-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libgomp-12.0.1-0.15.fc37.x86_64.rpm: Already downloaded [SKIPPED] libgpg-error-1.45-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] libidn2-2.3.2-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] libmount-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libnghttp2-1.47.0-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] libnsl2-2.0.0-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] libpkgconf-1.8.0-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] libpsl-0.21.1-5.fc36.x86_64.rpm: Already downloaded [SKIPPED] libpwquality-1.4.4-7.fc36.x86_64.rpm: Already downloaded [SKIPPED] libselinux-3.3-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] libsemanage-3.3-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] libsepol-3.3-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] libsigsegv-2.14-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] libsmartcols-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libssh-0.9.6-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] libssh-config-0.9.6-4.fc36.noarch.rpm: Already downloaded [SKIPPED] libstdc++-12.0.1-0.15.fc37.x86_64.rpm: Already downloaded [SKIPPED] libtasn1-4.18.0-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] libtirpc-1.3.2-1.rc1.fc36.1.x86_64.rpm: Already downloaded [SKIPPED] libunistring-1.0-1.fc36.x86_64.rpm: Already downloaded [SKIPPED] libutempter-1.2.1-6.fc36.x86_64.rpm: Already downloaded [SKIPPED] libuuid-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] libverto-0.3.2-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] libxcrypt-4.4.28-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] libxml2-2.9.13-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] libzstd-1.5.2-1.fc36.x86_64.rpm: Already downloaded [SKIPPED] lua-libs-5.4.4-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] lua-srpm-macros-1-6.fc36.noarch.rpm: Already downloaded [SKIPPED] lz4-libs-1.9.3-4.fc36.x86_64.rpm: Already downloaded [SKIPPED] mpfr-4.1.0-9.fc36.x86_64.rpm: Already downloaded [SKIPPED] ncurses-base-6.2-9.20210508.fc36.noarch.rpm: Already downloaded [SKIPPED] ncurses-libs-6.2-9.20210508.fc36.x86_64.rpm: Already downloaded [SKIPPED] nim-srpm-macros-3-6.fc36.noarch.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-6-6.fc36.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-11.fc36.noarch.rpm: Already downloaded [SKIPPED] openldap-2.6.1-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] openssl-libs-3.0.2-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-0.24.1-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.24.1-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] package-notes-srpm-macros-0.4-14.fc36.noarch.rpm: Already downloaded [SKIPPED] pam-1.5.2-12.fc37.x86_64.rpm: Already downloaded [SKIPPED] pam-libs-1.5.2-12.fc37.x86_64.rpm: Already downloaded [SKIPPED] patch-2.7.6-16.fc36.x86_64.rpm: Already downloaded [SKIPPED] pcre-8.45-1.fc36.1.x86_64.rpm: Already downloaded [SKIPPED] pcre2-10.39-1.fc36.1.x86_64.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.39-1.fc36.1.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-43.fc36.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.8.0-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.8.0-2.fc36.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.8.0-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] popt-1.18-7.fc36.x86_64.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20210518-4.fc36.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.10-17.fc36.noarch.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.15.3-1.fc37.noarch.rpm: Already downloaded [SKIPPED] readline-8.1-6.fc36.x86_64.rpm: Already downloaded [SKIPPED] redhat-rpm-config-214-1.fc37.noarch.rpm: Already downloaded [SKIPPED] rpm-4.17.0-10.fc37.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-4.17.0-10.fc37.x86_64.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.17.0-10.fc37.x86_64.rpm: Already downloaded [SKIPPED] rpm-libs-4.17.0-10.fc37.x86_64.rpm: Already downloaded [SKIPPED] rpmautospec-rpm-macros-0.2.5-1.fc35.noarch.rpm: Already downloaded [SKIPPED] rust-srpm-macros-21-1.fc37.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-10.fc36.x86_64.rpm: Already downloaded [SKIPPED] setup-2.13.9.1-3.fc36.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.11.1-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] sqlite-libs-3.38.2-1.fc37.x86_64.rpm: Already downloaded [SKIPPED] systemd-libs-251~rc1-3.fc37.x86_64.rpm: Already downloaded [SKIPPED] tar-1.34-3.fc36.x86_64.rpm: Already downloaded [SKIPPED] tzdata-2022a-1.fc37.noarch.rpm: Already downloaded [SKIPPED] unzip-6.0-57.fc36.x86_64.rpm: Already downloaded [SKIPPED] util-linux-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] util-linux-core-2.38-2.fc37.x86_64.rpm: Already downloaded [SKIPPED] which-2.21-33.fc37.x86_64.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.1-2.fc36.x86_64.rpm: Already downloaded [SKIPPED] xz-5.2.5-8.fc36.x86_64.rpm: Already downloaded [SKIPPED] xz-libs-5.2.5-8.fc36.x86_64.rpm: Already downloaded [SKIPPED] zip-3.0-32.fc36.x86_64.rpm: Already downloaded [SKIPPED] zlib-1.2.11-31.fc36.x86_64.rpm: Already downloaded [SKIPPED] zstd-1.5.2-1.fc36.x86_64.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x5323552A: Userid : "Fedora (37) " Fingerprint: ACB5 EE4E 831C 74BB 7C16 8D27 F55A D3FB 5323 552A From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-37-primary (0x5323552A) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0x38AB71F4: Userid : "Fedora (36) " Fingerprint: 53DE D2CB 922D 8B8D 9E63 FD18 999F 7CBF 38AB 71F4 From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-36-primary Key imported successfully Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.16-2.fc36.x86_64 1/1 Preparing : 1/1 Installing : libgcc-12.0.1-0.15.fc37.x86_64 1/152 Running scriptlet: libgcc-12.0.1-0.15.fc37.x86_64 1/152 Installing : crypto-policies-20220412-1.git97fe449.fc37.noarc 2/152 Running scriptlet: crypto-policies-20220412-1.git97fe449.fc37.noarc 2/152 Installing : fedora-release-identity-basic-37-0.3.noarch 3/152 Installing : tzdata-2022a-1.fc37.noarch 4/152 Installing : rust-srpm-macros-21-1.fc37.noarch 5/152 Installing : qt5-srpm-macros-5.15.3-1.fc37.noarch 6/152 Installing : publicsuffix-list-dafsa-20210518-4.fc36.noarch 7/152 Installing : pkgconf-m4-1.8.0-2.fc36.noarch 8/152 Installing : perl-srpm-macros-1-43.fc36.noarch 9/152 Installing : pcre2-syntax-10.39-1.fc36.1.noarch 10/152 Installing : openblas-srpm-macros-2-11.fc36.noarch 11/152 Installing : ocaml-srpm-macros-6-6.fc36.noarch 12/152 Installing : nim-srpm-macros-3-6.fc36.noarch 13/152 Installing : ncurses-base-6.2-9.20210508.fc36.noarch 14/152 Installing : libssh-config-0.9.6-4.fc36.noarch 15/152 Installing : kernel-srpm-macros-1.0-14.fc36.noarch 16/152 Installing : gnat-srpm-macros-4-15.fc36.noarch 17/152 Installing : ghc-srpm-macros-1.5.0-6.fc36.noarch 18/152 Installing : fpc-srpm-macros-1.3-5.fc36.noarch 19/152 Installing : fedora-gpg-keys-37-0.1.noarch 20/152 Installing : fedora-release-37-0.3.noarch 21/152 Installing : fedora-release-common-37-0.3.noarch 22/152 Installing : fedora-repos-rawhide-37-0.1.noarch 23/152 Installing : fedora-repos-37-0.1.noarch 24/152 Installing : setup-2.13.9.1-3.fc36.noarch 25/152 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.13.9.1-3.fc36.noarch 25/152 Installing : filesystem-3.16-2.fc36.x86_64 26/152 Installing : basesystem-11-13.fc36.noarch 27/152 Installing : glibc-gconv-extra-2.35.9000-12.fc37.x86_64 28/152 Running scriptlet: glibc-gconv-extra-2.35.9000-12.fc37.x86_64 28/152 Installing : glibc-minimal-langpack-2.35.9000-12.fc37.x86_64 29/152 Installing : glibc-common-2.35.9000-12.fc37.x86_64 30/152 Running scriptlet: glibc-2.35.9000-12.fc37.x86_64 31/152 Installing : glibc-2.35.9000-12.fc37.x86_64 31/152 Running scriptlet: glibc-2.35.9000-12.fc37.x86_64 31/152 Installing : ncurses-libs-6.2-9.20210508.fc36.x86_64 32/152 Installing : bash-5.1.16-2.fc36.x86_64 33/152 Running scriptlet: bash-5.1.16-2.fc36.x86_64 33/152 Installing : zlib-1.2.11-31.fc36.x86_64 34/152 Installing : xz-libs-5.2.5-8.fc36.x86_64 35/152 Installing : bzip2-libs-1.0.8-11.fc36.x86_64 36/152 Installing : elfutils-libelf-0.186-5.fc37.x86_64 37/152 Installing : libstdc++-12.0.1-0.15.fc37.x86_64 38/152 Installing : libuuid-2.38-2.fc37.x86_64 39/152 Installing : libzstd-1.5.2-1.fc36.x86_64 40/152 Installing : popt-1.18-7.fc36.x86_64 41/152 Installing : libblkid-2.38-2.fc37.x86_64 42/152 Installing : gmp-1:6.2.1-2.fc36.x86_64 43/152 Installing : libattr-2.5.1-4.fc36.x86_64 44/152 Installing : libacl-2.3.1-3.fc36.x86_64 45/152 Installing : libcap-2.48-4.fc36.x86_64 46/152 Installing : libxcrypt-4.4.28-1.fc37.x86_64 47/152 Installing : readline-8.1-6.fc36.x86_64 48/152 Installing : lz4-libs-1.9.3-4.fc36.x86_64 49/152 Installing : mpfr-4.1.0-9.fc36.x86_64 50/152 Installing : dwz-0.14-2.fc35.x86_64 51/152 Installing : unzip-6.0-57.fc36.x86_64 52/152 Installing : file-libs-5.41-5.fc37.x86_64 53/152 Installing : file-5.41-5.fc37.x86_64 54/152 Installing : sqlite-libs-3.38.2-1.fc37.x86_64 55/152 Installing : alternatives-1.19-2.fc36.x86_64 56/152 Installing : libcap-ng-0.8.3-1.fc37.x86_64 57/152 Installing : audit-libs-3.0.8-1.fc37.x86_64 58/152 Installing : libcom_err-1.46.5-2.fc36.x86_64 59/152 Installing : libsepol-3.3-3.fc36.x86_64 60/152 Installing : libsmartcols-2.38-2.fc37.x86_64 61/152 Installing : libunistring-1.0-1.fc36.x86_64 62/152 Installing : libidn2-2.3.2-4.fc36.x86_64 63/152 Installing : lua-libs-5.4.4-2.fc37.x86_64 64/152 Installing : libpsl-0.21.1-5.fc36.x86_64 65/152 Installing : zip-3.0-32.fc36.x86_64 66/152 Installing : zstd-1.5.2-1.fc36.x86_64 67/152 Installing : libfdisk-2.38-2.fc37.x86_64 68/152 Installing : bzip2-1.0.8-11.fc36.x86_64 69/152 Installing : libxml2-2.9.13-1.fc37.x86_64 70/152 Installing : elfutils-default-yama-scope-0.186-5.fc37.noarch 71/152 Running scriptlet: elfutils-default-yama-scope-0.186-5.fc37.noarch 71/152 Installing : info-6.8-3.fc36.x86_64 72/152 Installing : ed-1.14.2-12.fc36.x86_64 73/152 Installing : package-notes-srpm-macros-0.4-14.fc36.noarch 74/152 Installing : cpio-2.13-12.fc36.x86_64 75/152 Installing : diffutils-3.8-2.fc36.x86_64 76/152 Installing : gdbm-libs-1:1.22-2.fc36.x86_64 77/152 Installing : cyrus-sasl-lib-2.1.28-1.fc37.x86_64 78/152 Installing : keyutils-libs-1.6.1-4.fc36.x86_64 79/152 Installing : libbrotli-1.0.9-7.fc36.x86_64 80/152 Installing : libdb-5.3.28-52.fc37.x86_64 81/152 Installing : libeconf-0.4.0-3.fc36.x86_64 82/152 Installing : pam-libs-1.5.2-12.fc37.x86_64 83/152 Installing : libffi-3.4.2-8.fc36.x86_64 84/152 Installing : p11-kit-0.24.1-2.fc36.x86_64 85/152 Installing : libgomp-12.0.1-0.15.fc37.x86_64 86/152 Installing : libgpg-error-1.45-1.fc37.x86_64 87/152 Installing : libgcrypt-1.10.1-2.fc37.x86_64 88/152 Installing : systemd-libs-251~rc1-3.fc37.x86_64 89/152 Installing : libnghttp2-1.47.0-1.fc37.x86_64 90/152 Installing : libpkgconf-1.8.0-2.fc36.x86_64 91/152 Installing : pkgconf-1.8.0-2.fc36.x86_64 92/152 Installing : pkgconf-pkg-config-1.8.0-2.fc36.x86_64 93/152 Installing : libsigsegv-2.14-2.fc36.x86_64 94/152 Installing : gawk-5.1.1-3.fc37.x86_64 95/152 Installing : libtasn1-4.18.0-2.fc36.x86_64 96/152 Installing : p11-kit-trust-0.24.1-2.fc36.x86_64 97/152 Running scriptlet: p11-kit-trust-0.24.1-2.fc36.x86_64 97/152 Installing : libverto-0.3.2-3.fc36.x86_64 98/152 Installing : pcre-8.45-1.fc36.1.x86_64 99/152 Installing : grep-3.7-2.fc36.x86_64 100/152 Installing : xz-5.2.5-8.fc36.x86_64 101/152 Installing : pcre2-10.39-1.fc36.1.x86_64 102/152 Installing : libselinux-3.3-4.fc36.x86_64 103/152 Installing : sed-4.8-10.fc36.x86_64 104/152 Installing : findutils-1:4.9.0-1.fc36.x86_64 105/152 Installing : libmount-2.38-2.fc37.x86_64 106/152 Installing : util-linux-core-2.38-2.fc37.x86_64 107/152 Installing : libsemanage-3.3-3.fc37.x86_64 108/152 Installing : shadow-utils-2:4.11.1-2.fc37.x86_64 109/152 Running scriptlet: libutempter-1.2.1-6.fc36.x86_64 110/152 Installing : libutempter-1.2.1-6.fc36.x86_64 110/152 Installing : patch-2.7.6-16.fc36.x86_64 111/152 Installing : tar-2:1.34-3.fc36.x86_64 112/152 Installing : xxhash-libs-0.8.1-2.fc36.x86_64 113/152 Installing : coreutils-common-9.0-5.fc37.x86_64 114/152 Installing : openssl-libs-1:3.0.2-2.fc37.x86_64 115/152 Installing : coreutils-9.0-5.fc37.x86_64 116/152 Running scriptlet: ca-certificates-2021.2.52-3.fc36.noarch 117/152 Installing : ca-certificates-2021.2.52-3.fc36.noarch 117/152 Running scriptlet: ca-certificates-2021.2.52-3.fc36.noarch 117/152 Installing : krb5-libs-1.19.2-9.fc37.x86_64 118/152 Installing : libtirpc-1.3.2-1.rc1.fc36.1.x86_64 119/152 Running scriptlet: authselect-libs-1.3.0-10.fc37.x86_64 120/152 Installing : authselect-libs-1.3.0-10.fc37.x86_64 120/152 Installing : gzip-1.12-1.fc37.x86_64 121/152 Installing : cracklib-2.9.6-28.fc36.x86_64 122/152 Installing : authselect-1.3.0-10.fc37.x86_64 123/152 Installing : libnsl2-2.0.0-3.fc36.x86_64 124/152 Installing : libpwquality-1.4.4-7.fc36.x86_64 125/152 Installing : pam-1.5.2-12.fc37.x86_64 126/152 Installing : libssh-0.9.6-4.fc36.x86_64 127/152 Installing : libarchive-3.6.1-1.fc37.x86_64 128/152 Installing : libevent-2.1.12-6.fc36.x86_64 129/152 Installing : openldap-2.6.1-2.fc36.x86_64 130/152 Installing : libcurl-7.82.0-2.fc37.x86_64 131/152 Installing : elfutils-libs-0.186-5.fc37.x86_64 132/152 Installing : elfutils-debuginfod-client-0.186-5.fc37.x86_64 133/152 Installing : binutils-gold-2.38-8.fc37.x86_64 134/152 Installing : binutils-2.38-8.fc37.x86_64 135/152 Running scriptlet: binutils-2.38-8.fc37.x86_64 135/152 Installing : elfutils-0.186-5.fc37.x86_64 136/152 Installing : gdb-minimal-11.2-3.fc37.x86_64 137/152 Installing : debugedit-5.0-3.fc36.x86_64 138/152 Installing : curl-7.82.0-2.fc37.x86_64 139/152 Running scriptlet: rpm-4.17.0-10.fc37.x86_64 140/152 Installing : rpm-4.17.0-10.fc37.x86_64 140/152 Installing : rpm-libs-4.17.0-10.fc37.x86_64 141/152 Installing : rpm-build-libs-4.17.0-10.fc37.x86_64 142/152 Installing : efi-srpm-macros-5-5.fc36.noarch 143/152 Installing : lua-srpm-macros-1-6.fc36.noarch 144/152 Installing : rpmautospec-rpm-macros-0.2.5-1.fc35.noarch 145/152 Installing : fonts-srpm-macros-1:2.0.5-7.fc36.noarch 146/152 Installing : go-srpm-macros-3.0.15-1.fc36.noarch 147/152 Installing : python-srpm-macros-3.10-17.fc36.noarch 148/152 Installing : redhat-rpm-config-214-1.fc37.noarch 149/152 Installing : rpm-build-4.17.0-10.fc37.x86_64 150/152 Installing : util-linux-2.38-2.fc37.x86_64 151/152 Installing : which-2.21-33.fc37.x86_64 152/152 Running scriptlet: filesystem-3.16-2.fc36.x86_64 152/152 Running scriptlet: ca-certificates-2021.2.52-3.fc36.noarch 152/152 Running scriptlet: authselect-libs-1.3.0-10.fc37.x86_64 152/152 Running scriptlet: rpm-4.17.0-10.fc37.x86_64 152/152 Running scriptlet: which-2.21-33.fc37.x86_64 152/152 Verifying : alternatives-1.19-2.fc36.x86_64 1/152 Verifying : audit-libs-3.0.8-1.fc37.x86_64 2/152 Verifying : authselect-1.3.0-10.fc37.x86_64 3/152 Verifying : authselect-libs-1.3.0-10.fc37.x86_64 4/152 Verifying : basesystem-11-13.fc36.noarch 5/152 Verifying : bash-5.1.16-2.fc36.x86_64 6/152 Verifying : binutils-2.38-8.fc37.x86_64 7/152 Verifying : binutils-gold-2.38-8.fc37.x86_64 8/152 Verifying : bzip2-1.0.8-11.fc36.x86_64 9/152 Verifying : bzip2-libs-1.0.8-11.fc36.x86_64 10/152 Verifying : ca-certificates-2021.2.52-3.fc36.noarch 11/152 Verifying : coreutils-9.0-5.fc37.x86_64 12/152 Verifying : coreutils-common-9.0-5.fc37.x86_64 13/152 Verifying : cpio-2.13-12.fc36.x86_64 14/152 Verifying : cracklib-2.9.6-28.fc36.x86_64 15/152 Verifying : crypto-policies-20220412-1.git97fe449.fc37.noarc 16/152 Verifying : curl-7.82.0-2.fc37.x86_64 17/152 Verifying : cyrus-sasl-lib-2.1.28-1.fc37.x86_64 18/152 Verifying : debugedit-5.0-3.fc36.x86_64 19/152 Verifying : diffutils-3.8-2.fc36.x86_64 20/152 Verifying : dwz-0.14-2.fc35.x86_64 21/152 Verifying : ed-1.14.2-12.fc36.x86_64 22/152 Verifying : efi-srpm-macros-5-5.fc36.noarch 23/152 Verifying : elfutils-0.186-5.fc37.x86_64 24/152 Verifying : elfutils-debuginfod-client-0.186-5.fc37.x86_64 25/152 Verifying : elfutils-default-yama-scope-0.186-5.fc37.noarch 26/152 Verifying : elfutils-libelf-0.186-5.fc37.x86_64 27/152 Verifying : elfutils-libs-0.186-5.fc37.x86_64 28/152 Verifying : fedora-gpg-keys-37-0.1.noarch 29/152 Verifying : fedora-release-37-0.3.noarch 30/152 Verifying : fedora-release-common-37-0.3.noarch 31/152 Verifying : fedora-release-identity-basic-37-0.3.noarch 32/152 Verifying : fedora-repos-37-0.1.noarch 33/152 Verifying : fedora-repos-rawhide-37-0.1.noarch 34/152 Verifying : file-5.41-5.fc37.x86_64 35/152 Verifying : file-libs-5.41-5.fc37.x86_64 36/152 Verifying : filesystem-3.16-2.fc36.x86_64 37/152 Verifying : findutils-1:4.9.0-1.fc36.x86_64 38/152 Verifying : fonts-srpm-macros-1:2.0.5-7.fc36.noarch 39/152 Verifying : fpc-srpm-macros-1.3-5.fc36.noarch 40/152 Verifying : gawk-5.1.1-3.fc37.x86_64 41/152 Verifying : gdb-minimal-11.2-3.fc37.x86_64 42/152 Verifying : gdbm-libs-1:1.22-2.fc36.x86_64 43/152 Verifying : ghc-srpm-macros-1.5.0-6.fc36.noarch 44/152 Verifying : glibc-2.35.9000-12.fc37.x86_64 45/152 Verifying : glibc-common-2.35.9000-12.fc37.x86_64 46/152 Verifying : glibc-gconv-extra-2.35.9000-12.fc37.x86_64 47/152 Verifying : glibc-minimal-langpack-2.35.9000-12.fc37.x86_64 48/152 Verifying : gmp-1:6.2.1-2.fc36.x86_64 49/152 Verifying : gnat-srpm-macros-4-15.fc36.noarch 50/152 Verifying : go-srpm-macros-3.0.15-1.fc36.noarch 51/152 Verifying : grep-3.7-2.fc36.x86_64 52/152 Verifying : gzip-1.12-1.fc37.x86_64 53/152 Verifying : info-6.8-3.fc36.x86_64 54/152 Verifying : kernel-srpm-macros-1.0-14.fc36.noarch 55/152 Verifying : keyutils-libs-1.6.1-4.fc36.x86_64 56/152 Verifying : krb5-libs-1.19.2-9.fc37.x86_64 57/152 Verifying : libacl-2.3.1-3.fc36.x86_64 58/152 Verifying : libarchive-3.6.1-1.fc37.x86_64 59/152 Verifying : libattr-2.5.1-4.fc36.x86_64 60/152 Verifying : libblkid-2.38-2.fc37.x86_64 61/152 Verifying : libbrotli-1.0.9-7.fc36.x86_64 62/152 Verifying : libcap-2.48-4.fc36.x86_64 63/152 Verifying : libcap-ng-0.8.3-1.fc37.x86_64 64/152 Verifying : libcom_err-1.46.5-2.fc36.x86_64 65/152 Verifying : libcurl-7.82.0-2.fc37.x86_64 66/152 Verifying : libdb-5.3.28-52.fc37.x86_64 67/152 Verifying : libeconf-0.4.0-3.fc36.x86_64 68/152 Verifying : libevent-2.1.12-6.fc36.x86_64 69/152 Verifying : libfdisk-2.38-2.fc37.x86_64 70/152 Verifying : libffi-3.4.2-8.fc36.x86_64 71/152 Verifying : libgcc-12.0.1-0.15.fc37.x86_64 72/152 Verifying : libgcrypt-1.10.1-2.fc37.x86_64 73/152 Verifying : libgomp-12.0.1-0.15.fc37.x86_64 74/152 Verifying : libgpg-error-1.45-1.fc37.x86_64 75/152 Verifying : libidn2-2.3.2-4.fc36.x86_64 76/152 Verifying : libmount-2.38-2.fc37.x86_64 77/152 Verifying : libnghttp2-1.47.0-1.fc37.x86_64 78/152 Verifying : libnsl2-2.0.0-3.fc36.x86_64 79/152 Verifying : libpkgconf-1.8.0-2.fc36.x86_64 80/152 Verifying : libpsl-0.21.1-5.fc36.x86_64 81/152 Verifying : libpwquality-1.4.4-7.fc36.x86_64 82/152 Verifying : libselinux-3.3-4.fc36.x86_64 83/152 Verifying : libsemanage-3.3-3.fc37.x86_64 84/152 Verifying : libsepol-3.3-3.fc36.x86_64 85/152 Verifying : libsigsegv-2.14-2.fc36.x86_64 86/152 Verifying : libsmartcols-2.38-2.fc37.x86_64 87/152 Verifying : libssh-0.9.6-4.fc36.x86_64 88/152 Verifying : libssh-config-0.9.6-4.fc36.noarch 89/152 Verifying : libstdc++-12.0.1-0.15.fc37.x86_64 90/152 Verifying : libtasn1-4.18.0-2.fc36.x86_64 91/152 Verifying : libtirpc-1.3.2-1.rc1.fc36.1.x86_64 92/152 Verifying : libunistring-1.0-1.fc36.x86_64 93/152 Verifying : libutempter-1.2.1-6.fc36.x86_64 94/152 Verifying : libuuid-2.38-2.fc37.x86_64 95/152 Verifying : libverto-0.3.2-3.fc36.x86_64 96/152 Verifying : libxcrypt-4.4.28-1.fc37.x86_64 97/152 Verifying : libxml2-2.9.13-1.fc37.x86_64 98/152 Verifying : libzstd-1.5.2-1.fc36.x86_64 99/152 Verifying : lua-libs-5.4.4-2.fc37.x86_64 100/152 Verifying : lua-srpm-macros-1-6.fc36.noarch 101/152 Verifying : lz4-libs-1.9.3-4.fc36.x86_64 102/152 Verifying : mpfr-4.1.0-9.fc36.x86_64 103/152 Verifying : ncurses-base-6.2-9.20210508.fc36.noarch 104/152 Verifying : ncurses-libs-6.2-9.20210508.fc36.x86_64 105/152 Verifying : nim-srpm-macros-3-6.fc36.noarch 106/152 Verifying : ocaml-srpm-macros-6-6.fc36.noarch 107/152 Verifying : openblas-srpm-macros-2-11.fc36.noarch 108/152 Verifying : openldap-2.6.1-2.fc36.x86_64 109/152 Verifying : openssl-libs-1:3.0.2-2.fc37.x86_64 110/152 Verifying : p11-kit-0.24.1-2.fc36.x86_64 111/152 Verifying : p11-kit-trust-0.24.1-2.fc36.x86_64 112/152 Verifying : package-notes-srpm-macros-0.4-14.fc36.noarch 113/152 Verifying : pam-1.5.2-12.fc37.x86_64 114/152 Verifying : pam-libs-1.5.2-12.fc37.x86_64 115/152 Verifying : patch-2.7.6-16.fc36.x86_64 116/152 Verifying : pcre-8.45-1.fc36.1.x86_64 117/152 Verifying : pcre2-10.39-1.fc36.1.x86_64 118/152 Verifying : pcre2-syntax-10.39-1.fc36.1.noarch 119/152 Verifying : perl-srpm-macros-1-43.fc36.noarch 120/152 Verifying : pkgconf-1.8.0-2.fc36.x86_64 121/152 Verifying : pkgconf-m4-1.8.0-2.fc36.noarch 122/152 Verifying : pkgconf-pkg-config-1.8.0-2.fc36.x86_64 123/152 Verifying : popt-1.18-7.fc36.x86_64 124/152 Verifying : publicsuffix-list-dafsa-20210518-4.fc36.noarch 125/152 Verifying : python-srpm-macros-3.10-17.fc36.noarch 126/152 Verifying : qt5-srpm-macros-5.15.3-1.fc37.noarch 127/152 Verifying : readline-8.1-6.fc36.x86_64 128/152 Verifying : redhat-rpm-config-214-1.fc37.noarch 129/152 Verifying : rpm-4.17.0-10.fc37.x86_64 130/152 Verifying : rpm-build-4.17.0-10.fc37.x86_64 131/152 Verifying : rpm-build-libs-4.17.0-10.fc37.x86_64 132/152 Verifying : rpm-libs-4.17.0-10.fc37.x86_64 133/152 Verifying : rpmautospec-rpm-macros-0.2.5-1.fc35.noarch 134/152 Verifying : rust-srpm-macros-21-1.fc37.noarch 135/152 Verifying : sed-4.8-10.fc36.x86_64 136/152 Verifying : setup-2.13.9.1-3.fc36.noarch 137/152 Verifying : shadow-utils-2:4.11.1-2.fc37.x86_64 138/152 Verifying : sqlite-libs-3.38.2-1.fc37.x86_64 139/152 Verifying : systemd-libs-251~rc1-3.fc37.x86_64 140/152 Verifying : tar-2:1.34-3.fc36.x86_64 141/152 Verifying : tzdata-2022a-1.fc37.noarch 142/152 Verifying : unzip-6.0-57.fc36.x86_64 143/152 Verifying : util-linux-2.38-2.fc37.x86_64 144/152 Verifying : util-linux-core-2.38-2.fc37.x86_64 145/152 Verifying : which-2.21-33.fc37.x86_64 146/152 Verifying : xxhash-libs-0.8.1-2.fc36.x86_64 147/152 Verifying : xz-5.2.5-8.fc36.x86_64 148/152 Verifying : xz-libs-5.2.5-8.fc36.x86_64 149/152 Verifying : zip-3.0-32.fc36.x86_64 150/152 Verifying : zlib-1.2.11-31.fc36.x86_64 151/152 Verifying : zstd-1.5.2-1.fc36.x86_64 152/152 Installed: alternatives-1.19-2.fc36.x86_64 audit-libs-3.0.8-1.fc37.x86_64 authselect-1.3.0-10.fc37.x86_64 authselect-libs-1.3.0-10.fc37.x86_64 basesystem-11-13.fc36.noarch bash-5.1.16-2.fc36.x86_64 binutils-2.38-8.fc37.x86_64 binutils-gold-2.38-8.fc37.x86_64 bzip2-1.0.8-11.fc36.x86_64 bzip2-libs-1.0.8-11.fc36.x86_64 ca-certificates-2021.2.52-3.fc36.noarch coreutils-9.0-5.fc37.x86_64 coreutils-common-9.0-5.fc37.x86_64 cpio-2.13-12.fc36.x86_64 cracklib-2.9.6-28.fc36.x86_64 crypto-policies-20220412-1.git97fe449.fc37.noarch curl-7.82.0-2.fc37.x86_64 cyrus-sasl-lib-2.1.28-1.fc37.x86_64 debugedit-5.0-3.fc36.x86_64 diffutils-3.8-2.fc36.x86_64 dwz-0.14-2.fc35.x86_64 ed-1.14.2-12.fc36.x86_64 efi-srpm-macros-5-5.fc36.noarch elfutils-0.186-5.fc37.x86_64 elfutils-debuginfod-client-0.186-5.fc37.x86_64 elfutils-default-yama-scope-0.186-5.fc37.noarch elfutils-libelf-0.186-5.fc37.x86_64 elfutils-libs-0.186-5.fc37.x86_64 fedora-gpg-keys-37-0.1.noarch fedora-release-37-0.3.noarch fedora-release-common-37-0.3.noarch fedora-release-identity-basic-37-0.3.noarch fedora-repos-37-0.1.noarch fedora-repos-rawhide-37-0.1.noarch file-5.41-5.fc37.x86_64 file-libs-5.41-5.fc37.x86_64 filesystem-3.16-2.fc36.x86_64 findutils-1:4.9.0-1.fc36.x86_64 fonts-srpm-macros-1:2.0.5-7.fc36.noarch fpc-srpm-macros-1.3-5.fc36.noarch gawk-5.1.1-3.fc37.x86_64 gdb-minimal-11.2-3.fc37.x86_64 gdbm-libs-1:1.22-2.fc36.x86_64 ghc-srpm-macros-1.5.0-6.fc36.noarch glibc-2.35.9000-12.fc37.x86_64 glibc-common-2.35.9000-12.fc37.x86_64 glibc-gconv-extra-2.35.9000-12.fc37.x86_64 glibc-minimal-langpack-2.35.9000-12.fc37.x86_64 gmp-1:6.2.1-2.fc36.x86_64 gnat-srpm-macros-4-15.fc36.noarch go-srpm-macros-3.0.15-1.fc36.noarch grep-3.7-2.fc36.x86_64 gzip-1.12-1.fc37.x86_64 info-6.8-3.fc36.x86_64 kernel-srpm-macros-1.0-14.fc36.noarch keyutils-libs-1.6.1-4.fc36.x86_64 krb5-libs-1.19.2-9.fc37.x86_64 libacl-2.3.1-3.fc36.x86_64 libarchive-3.6.1-1.fc37.x86_64 libattr-2.5.1-4.fc36.x86_64 libblkid-2.38-2.fc37.x86_64 libbrotli-1.0.9-7.fc36.x86_64 libcap-2.48-4.fc36.x86_64 libcap-ng-0.8.3-1.fc37.x86_64 libcom_err-1.46.5-2.fc36.x86_64 libcurl-7.82.0-2.fc37.x86_64 libdb-5.3.28-52.fc37.x86_64 libeconf-0.4.0-3.fc36.x86_64 libevent-2.1.12-6.fc36.x86_64 libfdisk-2.38-2.fc37.x86_64 libffi-3.4.2-8.fc36.x86_64 libgcc-12.0.1-0.15.fc37.x86_64 libgcrypt-1.10.1-2.fc37.x86_64 libgomp-12.0.1-0.15.fc37.x86_64 libgpg-error-1.45-1.fc37.x86_64 libidn2-2.3.2-4.fc36.x86_64 libmount-2.38-2.fc37.x86_64 libnghttp2-1.47.0-1.fc37.x86_64 libnsl2-2.0.0-3.fc36.x86_64 libpkgconf-1.8.0-2.fc36.x86_64 libpsl-0.21.1-5.fc36.x86_64 libpwquality-1.4.4-7.fc36.x86_64 libselinux-3.3-4.fc36.x86_64 libsemanage-3.3-3.fc37.x86_64 libsepol-3.3-3.fc36.x86_64 libsigsegv-2.14-2.fc36.x86_64 libsmartcols-2.38-2.fc37.x86_64 libssh-0.9.6-4.fc36.x86_64 libssh-config-0.9.6-4.fc36.noarch libstdc++-12.0.1-0.15.fc37.x86_64 libtasn1-4.18.0-2.fc36.x86_64 libtirpc-1.3.2-1.rc1.fc36.1.x86_64 libunistring-1.0-1.fc36.x86_64 libutempter-1.2.1-6.fc36.x86_64 libuuid-2.38-2.fc37.x86_64 libverto-0.3.2-3.fc36.x86_64 libxcrypt-4.4.28-1.fc37.x86_64 libxml2-2.9.13-1.fc37.x86_64 libzstd-1.5.2-1.fc36.x86_64 lua-libs-5.4.4-2.fc37.x86_64 lua-srpm-macros-1-6.fc36.noarch lz4-libs-1.9.3-4.fc36.x86_64 mpfr-4.1.0-9.fc36.x86_64 ncurses-base-6.2-9.20210508.fc36.noarch ncurses-libs-6.2-9.20210508.fc36.x86_64 nim-srpm-macros-3-6.fc36.noarch ocaml-srpm-macros-6-6.fc36.noarch openblas-srpm-macros-2-11.fc36.noarch openldap-2.6.1-2.fc36.x86_64 openssl-libs-1:3.0.2-2.fc37.x86_64 p11-kit-0.24.1-2.fc36.x86_64 p11-kit-trust-0.24.1-2.fc36.x86_64 package-notes-srpm-macros-0.4-14.fc36.noarch pam-1.5.2-12.fc37.x86_64 pam-libs-1.5.2-12.fc37.x86_64 patch-2.7.6-16.fc36.x86_64 pcre-8.45-1.fc36.1.x86_64 pcre2-10.39-1.fc36.1.x86_64 pcre2-syntax-10.39-1.fc36.1.noarch perl-srpm-macros-1-43.fc36.noarch pkgconf-1.8.0-2.fc36.x86_64 pkgconf-m4-1.8.0-2.fc36.noarch pkgconf-pkg-config-1.8.0-2.fc36.x86_64 popt-1.18-7.fc36.x86_64 publicsuffix-list-dafsa-20210518-4.fc36.noarch python-srpm-macros-3.10-17.fc36.noarch qt5-srpm-macros-5.15.3-1.fc37.noarch readline-8.1-6.fc36.x86_64 redhat-rpm-config-214-1.fc37.noarch rpm-4.17.0-10.fc37.x86_64 rpm-build-4.17.0-10.fc37.x86_64 rpm-build-libs-4.17.0-10.fc37.x86_64 rpm-libs-4.17.0-10.fc37.x86_64 rpmautospec-rpm-macros-0.2.5-1.fc35.noarch rust-srpm-macros-21-1.fc37.noarch sed-4.8-10.fc36.x86_64 setup-2.13.9.1-3.fc36.noarch shadow-utils-2:4.11.1-2.fc37.x86_64 sqlite-libs-3.38.2-1.fc37.x86_64 systemd-libs-251~rc1-3.fc37.x86_64 tar-2:1.34-3.fc36.x86_64 tzdata-2022a-1.fc37.noarch unzip-6.0-57.fc36.x86_64 util-linux-2.38-2.fc37.x86_64 util-linux-core-2.38-2.fc37.x86_64 which-2.21-33.fc37.x86_64 xxhash-libs-0.8.1-2.fc36.x86_64 xz-5.2.5-8.fc36.x86_64 xz-libs-5.2.5-8.fc36.x86_64 zip-3.0-32.fc36.x86_64 zlib-1.2.11-31.fc36.x86_64 zstd-1.5.2-1.fc36.x86_64 Complete! Finish: dnf install Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: tzdata-2022a-1.fc37.noarch pkgconf-pkg-config-1.8.0-2.fc36.x86_64 grep-3.7-2.fc36.x86_64 libeconf-0.4.0-3.fc36.x86_64 systemd-libs-251~rc1-3.fc37.x86_64 elfutils-libs-0.186-5.fc37.x86_64 info-6.8-3.fc36.x86_64 pkgconf-1.8.0-2.fc36.x86_64 zstd-1.5.2-1.fc36.x86_64 gdbm-libs-1.22-2.fc36.x86_64 lua-libs-5.4.4-2.fc37.x86_64 libffi-3.4.2-8.fc36.x86_64 libnghttp2-1.47.0-1.fc37.x86_64 libselinux-3.3-4.fc36.x86_64 libpwquality-1.4.4-7.fc36.x86_64 gawk-5.1.1-3.fc37.x86_64 p11-kit-trust-0.24.1-2.fc36.x86_64 gpg-pubkey-38ab71f4-60242b08 libverto-0.3.2-3.fc36.x86_64 unzip-6.0-57.fc36.x86_64 elfutils-libelf-0.186-5.fc37.x86_64 shadow-utils-4.11.1-2.fc37.x86_64 libzstd-1.5.2-1.fc36.x86_64 popt-1.18-7.fc36.x86_64 fedora-release-common-37-0.3.noarch publicsuffix-list-dafsa-20210518-4.fc36.noarch libcap-2.48-4.fc36.x86_64 package-notes-srpm-macros-0.4-14.fc36.noarch rpmautospec-rpm-macros-0.2.5-1.fc35.noarch go-srpm-macros-3.0.15-1.fc36.noarch libpkgconf-1.8.0-2.fc36.x86_64 libnsl2-2.0.0-3.fc36.x86_64 bzip2-1.0.8-11.fc36.x86_64 pcre-8.45-1.fc36.1.x86_64 fonts-srpm-macros-2.0.5-7.fc36.noarch cpio-2.13-12.fc36.x86_64 libblkid-2.38-2.fc37.x86_64 libxcrypt-4.4.28-1.fc37.x86_64 ca-certificates-2021.2.52-3.fc36.noarch python-srpm-macros-3.10-17.fc36.noarch filesystem-3.16-2.fc36.x86_64 libbrotli-1.0.9-7.fc36.x86_64 krb5-libs-1.19.2-9.fc37.x86_64 authselect-libs-1.3.0-10.fc37.x86_64 fpc-srpm-macros-1.3-5.fc36.noarch readline-8.1-6.fc36.x86_64 rust-srpm-macros-21-1.fc37.noarch gnat-srpm-macros-4-15.fc36.noarch ghc-srpm-macros-1.5.0-6.fc36.noarch dwz-0.14-2.fc35.x86_64 lua-srpm-macros-1-6.fc36.noarch openssl-libs-3.0.2-2.fc37.x86_64 libutempter-1.2.1-6.fc36.x86_64 kernel-srpm-macros-1.0-14.fc36.noarch libgcc-12.0.1-0.15.fc37.x86_64 fedora-release-37-0.3.noarch util-linux-2.38-2.fc37.x86_64 findutils-4.9.0-1.fc36.x86_64 file-5.41-5.fc37.x86_64 fedora-release-identity-basic-37-0.3.noarch p11-kit-0.24.1-2.fc36.x86_64 pam-libs-1.5.2-12.fc37.x86_64 elfutils-default-yama-scope-0.186-5.fc37.noarch xz-5.2.5-8.fc36.x86_64 xxhash-libs-0.8.1-2.fc36.x86_64 libacl-2.3.1-3.fc36.x86_64 elfutils-0.186-5.fc37.x86_64 gdb-minimal-11.2-3.fc37.x86_64 libcap-ng-0.8.3-1.fc37.x86_64 libstdc++-12.0.1-0.15.fc37.x86_64 debugedit-5.0-3.fc36.x86_64 libuuid-2.38-2.fc37.x86_64 ed-1.14.2-12.fc36.x86_64 xz-libs-5.2.5-8.fc36.x86_64 glibc-gconv-extra-2.35.9000-12.fc37.x86_64 cracklib-2.9.6-28.fc36.x86_64 openblas-srpm-macros-2-11.fc36.noarch sqlite-libs-3.38.2-1.fc37.x86_64 setup-2.13.9.1-3.fc36.noarch libssh-config-0.9.6-4.fc36.noarch openldap-2.6.1-2.fc36.x86_64 alternatives-1.19-2.fc36.x86_64 zlib-1.2.11-31.fc36.x86_64 fedora-gpg-keys-37-0.1.noarch mpfr-4.1.0-9.fc36.x86_64 libgpg-error-1.45-1.fc37.x86_64 libsmartcols-2.38-2.fc37.x86_64 nim-srpm-macros-3-6.fc36.noarch patch-2.7.6-16.fc36.x86_64 libtasn1-4.18.0-2.fc36.x86_64 ncurses-base-6.2-9.20210508.fc36.noarch rpm-build-libs-4.17.0-10.fc37.x86_64 libsemanage-3.3-3.fc37.x86_64 crypto-policies-20220412-1.git97fe449.fc37.noarch libdb-5.3.28-52.fc37.x86_64 lz4-libs-1.9.3-4.fc36.x86_64 libidn2-2.3.2-4.fc36.x86_64 glibc-2.35.9000-12.fc37.x86_64 libssh-0.9.6-4.fc36.x86_64 ncurses-libs-6.2-9.20210508.fc36.x86_64 basesystem-11-13.fc36.noarch file-libs-5.41-5.fc37.x86_64 libfdisk-2.38-2.fc37.x86_64 libevent-2.1.12-6.fc36.x86_64 authselect-1.3.0-10.fc37.x86_64 efi-srpm-macros-5-5.fc36.noarch binutils-2.38-8.fc37.x86_64 libunistring-1.0-1.fc36.x86_64 gpg-pubkey-5323552a-6112bcdc pam-1.5.2-12.fc37.x86_64 qt5-srpm-macros-5.15.3-1.fc37.noarch redhat-rpm-config-214-1.fc37.noarch coreutils-common-9.0-5.fc37.x86_64 libpsl-0.21.1-5.fc36.x86_64 tar-1.34-3.fc36.x86_64 libtirpc-1.3.2-1.rc1.fc36.1.x86_64 pcre2-syntax-10.39-1.fc36.1.noarch glibc-minimal-langpack-2.35.9000-12.fc37.x86_64 glibc-common-2.35.9000-12.fc37.x86_64 audit-libs-3.0.8-1.fc37.x86_64 bzip2-libs-1.0.8-11.fc36.x86_64 rpm-libs-4.17.0-10.fc37.x86_64 bash-5.1.16-2.fc36.x86_64 pcre2-10.39-1.fc36.1.x86_64 util-linux-core-2.38-2.fc37.x86_64 binutils-gold-2.38-8.fc37.x86_64 libgcrypt-1.10.1-2.fc37.x86_64 libsigsegv-2.14-2.fc36.x86_64 rpm-4.17.0-10.fc37.x86_64 cyrus-sasl-lib-2.1.28-1.fc37.x86_64 gmp-6.2.1-2.fc36.x86_64 libattr-2.5.1-4.fc36.x86_64 libcom_err-1.46.5-2.fc36.x86_64 libmount-2.38-2.fc37.x86_64 which-2.21-33.fc37.x86_64 libxml2-2.9.13-1.fc37.x86_64 ocaml-srpm-macros-6-6.fc36.noarch diffutils-3.8-2.fc36.x86_64 libsepol-3.3-3.fc36.x86_64 keyutils-libs-1.6.1-4.fc36.x86_64 fedora-repos-rawhide-37-0.1.noarch sed-4.8-10.fc36.x86_64 coreutils-9.0-5.fc37.x86_64 gzip-1.12-1.fc37.x86_64 pkgconf-m4-1.8.0-2.fc36.noarch rpm-build-4.17.0-10.fc37.x86_64 libarchive-3.6.1-1.fc37.x86_64 perl-srpm-macros-1-43.fc36.noarch zip-3.0-32.fc36.x86_64 fedora-repos-37-0.1.noarch curl-7.82.0-2.fc37.x86_64 libgomp-12.0.1-0.15.fc37.x86_64 libcurl-7.82.0-2.fc37.x86_64 elfutils-debuginfod-client-0.186-5.fc37.x86_64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1643500800 Wrote: /builddir/build/SRPMS/dolfin-2019.1.0.post0-30.fc37.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-82y_5mzu/dolfin/dolfin.spec) Config(child) 0 minutes 52 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running (timeout=18000): unbuffer mock --rebuild /var/lib/copr-rpmbuild/results/dolfin-2019.1.0.post0-30.fc37.src.rpm --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1650168589.696153 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 3.0 starting (python version = 3.10.2, NVR = mock-3.0-1.fc35)... Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/results/dolfin-2019.1.0.post0-30.fc37.src.rpm) Config(fedora-rawhide-x86_64) Start: clean chroot Finish: clean chroot Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1650168589.696153/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1650168589.696153/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.0 INFO: Mock Version: 3.0 Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Mock Version: 3.0 INFO: Mock Version: 3.0 Start: dnf update No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 42 kB/s | 3.6 kB 00:00 fedora 143 kB/s | 12 kB 00:00 Dependencies resolved. Nothing to do. Complete! Finish: dnf update Finish: chroot init Start: build phase for dolfin-2019.1.0.post0-30.fc37.src.rpm Start: build setup for dolfin-2019.1.0.post0-30.fc37.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1643500800 Wrote: /builddir/build/SRPMS/dolfin-2019.1.0.post0-30.fc37.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 34 kB/s | 3.6 kB 00:00 fedora 150 kB/s | 12 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing: boost-devel x86_64 1.76.0-10.fc37 fedora 11 M chrpath x86_64 0.16-17.fc36 fedora 30 k cmake x86_64 3.23.0-0.1.rc2.fc37 fedora 6.4 M eigen3-devel noarch 3.4.0-6.fc37 fedora 1.1 M flexiblas-devel x86_64 3.1.3-1.fc37 fedora 107 k gcc-c++ x86_64 12.0.1-0.15.fc37 fedora 13 M gnupg2 x86_64 2.3.4-2.fc36 fedora 2.5 M hdf5-devel x86_64 1.12.1-5.fc36 fedora 1.3 M make x86_64 1:4.3-8.fc37 fedora 534 k petsc-devel x86_64 3.16.5-3.fc37 fedora 2.2 M pybind11-devel x86_64 2.9.2-1.fc37 fedora 158 k python3-devel x86_64 3.10.4-1.fc37 fedora 208 k python3-dijitso noarch 2019.1.0-9.fc36 fedora 70 k python3-ffc noarch 2019.1.0.post0-8.fc36 fedora 517 k python3-numpy x86_64 1:1.22.0-2.fc36 fedora 5.7 M python3-setuptools noarch 60.9.3-1.fc37 fedora 1.0 M python3-ufl noarch 2019.1.0-12.fc36 fedora 387 k scotch-devel x86_64 6.1.2-2.fc36 fedora 13 k sundials-devel x86_64 5.8.0-4.fc36 fedora 1.3 M zlib-devel x86_64 1.2.11-31.fc36 fedora 44 k Installing dependencies: Lmod x86_64 8.6.16-1.fc37 fedora 229 k SuperLU x86_64 5.3.0-2.fc37 fedora 188 k annobin-docs noarch 10.65-1.fc37 fedora 89 k annobin-plugin-gcc x86_64 10.65-1.fc37 fedora 881 k boost x86_64 1.76.0-10.fc37 fedora 14 k boost-atomic x86_64 1.76.0-10.fc37 fedora 20 k boost-chrono x86_64 1.76.0-10.fc37 fedora 27 k boost-container x86_64 1.76.0-10.fc37 fedora 40 k boost-context x86_64 1.76.0-10.fc37 fedora 18 k boost-contract x86_64 1.76.0-10.fc37 fedora 47 k boost-coroutine x86_64 1.76.0-10.fc37 fedora 34 k boost-date-time x86_64 1.76.0-10.fc37 fedora 16 k boost-fiber x86_64 1.76.0-10.fc37 fedora 42 k boost-filesystem x86_64 1.76.0-10.fc37 fedora 60 k boost-graph x86_64 1.76.0-10.fc37 fedora 149 k boost-iostreams x86_64 1.76.0-10.fc37 fedora 40 k boost-locale x86_64 1.76.0-10.fc37 fedora 218 k boost-log x86_64 1.76.0-10.fc37 fedora 478 k boost-math x86_64 1.76.0-10.fc37 fedora 205 k boost-nowide x86_64 1.76.0-10.fc37 fedora 18 k boost-numpy3 x86_64 1.76.0-10.fc37 fedora 29 k boost-program-options x86_64 1.76.0-10.fc37 fedora 108 k boost-python3 x86_64 1.76.0-10.fc37 fedora 96 k boost-random x86_64 1.76.0-10.fc37 fedora 26 k boost-regex x86_64 1.76.0-10.fc37 fedora 114 k boost-serialization x86_64 1.76.0-10.fc37 fedora 133 k boost-stacktrace x86_64 1.76.0-10.fc37 fedora 30 k boost-system x86_64 1.76.0-10.fc37 fedora 16 k boost-test x86_64 1.76.0-10.fc37 fedora 234 k boost-thread x86_64 1.76.0-10.fc37 fedora 58 k boost-timer x86_64 1.76.0-10.fc37 fedora 26 k boost-type_erasure x86_64 1.76.0-10.fc37 fedora 33 k boost-wave x86_64 1.76.0-10.fc37 fedora 205 k cairo x86_64 1.17.6-1.fc37 fedora 675 k cgnslib x86_64 4.3.0-1.fc37 fedora 704 k cgnslib-common noarch 4.3.0-1.fc37 fedora 104 k cmake-data noarch 3.23.0-0.1.rc2.fc37 fedora 1.6 M cmake-filesystem x86_64 3.23.0-0.1.rc2.fc37 fedora 18 k cmake-rpm-macros noarch 3.23.0-0.1.rc2.fc37 fedora 17 k cpp x86_64 12.0.1-0.15.fc37 fedora 11 M dejavu-sans-fonts noarch 2.37-18.fc36 fedora 1.3 M emacs-filesystem noarch 1:27.2-11.fc37 fedora 9.1 k expat x86_64 2.4.8-1.fc37 fedora 109 k flexiblas x86_64 3.1.3-1.fc37 fedora 33 k flexiblas-netlib x86_64 3.1.3-1.fc37 fedora 3.1 M flexiblas-netlib64 x86_64 3.1.3-1.fc37 fedora 3.0 M flexiblas-openblas-openmp x86_64 3.1.3-1.fc37 fedora 17 k flexiblas-openblas-openmp64 x86_64 3.1.3-1.fc37 fedora 17 k fontconfig x86_64 2.14.0-1.fc37 fedora 275 k fonts-filesystem noarch 1:2.0.5-7.fc36 fedora 9.0 k freetype x86_64 2.11.1-2.fc36 fedora 404 k fribidi x86_64 1.0.11-3.fc37 fedora 52 k gc x86_64 8.0.6-2.fc36 fedora 103 k gcc x86_64 12.0.1-0.15.fc37 fedora 33 M gcc-gfortran x86_64 12.0.1-0.15.fc37 fedora 12 M glib2 x86_64 2.72.0-1.fc37 fedora 2.7 M glibc-devel x86_64 2.35.9000-12.fc37 fedora 70 k glibc-headers-x86 noarch 2.35.9000-12.fc37 fedora 473 k gnutls x86_64 3.7.3-2.fc36 fedora 1.1 M google-noto-fonts-common noarch 20201206-9.fc37 fedora 15 k google-noto-sans-vf-fonts noarch 20201206-9.fc37 fedora 492 k graphite2 x86_64 1.3.14-9.fc36 fedora 95 k groff-base x86_64 1.22.4-9.fc36 fedora 1.0 M guile22 x86_64 2.2.7-5.fc36 fedora 6.4 M harfbuzz x86_64 4.2.0-1.fc37 fedora 751 k hdf5 x86_64 1.12.1-5.fc36 fedora 2.2 M hwdata noarch 0.358-1.fc37 fedora 1.5 M hwloc-libs x86_64 2.5.0-3.fc36 fedora 2.2 M jbigkit-libs x86_64 2.1-23.fc36 fedora 53 k jsoncpp x86_64 1.9.5-2.fc36 fedora 98 k kernel-headers x86_64 5.18.0-0.rc2.git0.1.fc37 fedora 1.3 M langpacks-core-font-en noarch 3.0-22.fc37 fedora 9.8 k lcms2 x86_64 2.13.1-1.fc37 fedora 175 k libICE x86_64 1.0.10-8.fc36 fedora 71 k libSM x86_64 1.2.3-10.fc36 fedora 42 k libX11 x86_64 1.7.5-1.fc37 fedora 647 k libX11-common noarch 1.7.5-1.fc37 fedora 149 k libX11-xcb x86_64 1.7.5-1.fc37 fedora 12 k libXau x86_64 1.0.9-8.fc36 fedora 30 k libXext x86_64 1.3.4-8.fc36 fedora 39 k libXfixes x86_64 6.0.0-3.fc36 fedora 19 k libXft x86_64 2.3.4-2.fc36 fedora 63 k libXmu x86_64 1.1.3-8.fc36 fedora 75 k libXrender x86_64 0.9.10-16.fc36 fedora 27 k libXt x86_64 1.2.1-2.fc36 fedora 181 k libXxf86vm x86_64 1.1.4-18.fc36 fedora 18 k libaec x86_64 1.0.6-2.fc36 fedora 41 k libaec-devel x86_64 1.0.6-2.fc36 fedora 12 k libassuan x86_64 2.5.5-4.fc36 fedora 67 k libdrm x86_64 2.4.110-1.fc37 fedora 163 k libgfortran x86_64 12.0.1-0.15.fc37 fedora 888 k libglvnd x86_64 1:1.4.0-2.fc36 fedora 133 k libglvnd-glx x86_64 1:1.4.0-2.fc36 fedora 140 k libglvnd-opengl x86_64 1:1.4.0-2.fc36 fedora 43 k libicu x86_64 69.1-5.fc36 fedora 9.8 M libicu-devel x86_64 69.1-5.fc36 fedora 838 k libimagequant x86_64 2.17.0-2.fc36 fedora 62 k libjpeg-turbo x86_64 2.1.3-1.fc37 fedora 182 k libksba x86_64 1.6.0-3.fc36 fedora 157 k libmpc x86_64 1.2.1-4.fc36 fedora 61 k libpciaccess x86_64 0.16-6.fc36 fedora 27 k libpng x86_64 2:1.6.37-12.fc36 fedora 119 k libqhull_r x86_64 1:7.2.1-9.fc36 fedora 169 k libquadmath x86_64 12.0.1-0.15.fc37 fedora 193 k libquadmath-devel x86_64 12.0.1-0.15.fc37 fedora 35 k libraqm x86_64 0.8.0-1.fc36 fedora 20 k libstdc++-devel x86_64 12.0.1-0.15.fc37 fedora 2.3 M libtiff x86_64 4.3.0-6.fc37 fedora 194 k libtool-ltdl x86_64 2.4.7-1.fc37 fedora 37 k libuv x86_64 1:1.44.1-1.fc37 fedora 150 k libwebp x86_64 1.2.2-5.fc37 fedora 290 k libxcb x86_64 1.13.1-9.fc36 fedora 229 k libxcrypt-devel x86_64 4.4.28-1.fc37 fedora 29 k libxshmfence x86_64 1.3-10.fc36 fedora 12 k libxslt x86_64 1.1.35-1.fc37 fedora 243 k lua x86_64 5.4.4-2.fc37 fedora 189 k lua-filesystem x86_64 1.8.0-6.fc36 fedora 34 k lua-json noarch 1.3.2-19.fc36 fedora 26 k lua-lpeg x86_64 1.0.2-8.fc36 fedora 67 k lua-posix x86_64 35.1-1.fc37 fedora 131 k lua-term x86_64 0.07-15.fc36 fedora 15 k mesa-libGL x86_64 22.0.1-1.fc37 fedora 172 k mesa-libGLU x86_64 9.0.1-6.fc36 fedora 155 k mesa-libglapi x86_64 22.0.1-1.fc37 fedora 53 k mpdecimal x86_64 2.5.1-3.fc36 fedora 102 k mpi4py-common noarch 3.1.3-2.fc36 fedora 18 k mpich x86_64 4.0.2-1.fc37 fedora 1.8 M ncurses x86_64 6.2-9.20210508.fc36 fedora 400 k nettle x86_64 3.7.3-3.fc36 fedora 399 k npth x86_64 1.6-8.fc36 fedora 24 k openblas x86_64 0.3.20-1.fc37 fedora 34 k openblas-openmp x86_64 0.3.20-1.fc37 fedora 5.1 M openblas-openmp64 x86_64 0.3.20-1.fc37 fedora 4.9 M openjpeg2 x86_64 2.4.0-8.fc37 fedora 164 k openldap-compat x86_64 2.6.1-2.fc36 fedora 18 k perl-Carp noarch 1.52-479.fc36 fedora 29 k perl-Class-Struct noarch 0.66-486.fc37 fedora 27 k perl-DynaLoader x86_64 1.50-486.fc37 fedora 31 k perl-Encode x86_64 4:3.17-485.fc37 fedora 1.7 M perl-Errno x86_64 1.33-486.fc37 fedora 20 k perl-Exporter noarch 5.76-480.fc36 fedora 31 k perl-Fcntl x86_64 1.14-486.fc37 fedora 25 k perl-File-Basename noarch 2.85-486.fc37 fedora 22 k perl-File-Path noarch 2.18-479.fc36 fedora 35 k perl-File-Temp noarch 1:0.231.100-479.fc36 fedora 59 k perl-File-stat noarch 1.09-486.fc37 fedora 22 k perl-Getopt-Long noarch 1:2.52-479.fc36 fedora 60 k perl-Getopt-Std noarch 1.13-486.fc37 fedora 21 k perl-HTTP-Tiny noarch 0.080-2.fc36 fedora 55 k perl-IO x86_64 1.46-486.fc37 fedora 92 k perl-IPC-Open3 noarch 1.21-486.fc37 fedora 28 k perl-MIME-Base64 x86_64 3.16-479.fc36 fedora 30 k perl-POSIX x86_64 1.97-486.fc37 fedora 102 k perl-PathTools x86_64 3.80-479.fc36 fedora 85 k perl-Pod-Escapes noarch 1:1.07-479.fc36 fedora 20 k perl-Pod-Perldoc noarch 3.28.01-480.fc36 fedora 83 k perl-Pod-Simple noarch 1:3.43-3.fc36 fedora 215 k perl-Pod-Usage noarch 4:2.01-479.fc36 fedora 40 k perl-Scalar-List-Utils x86_64 5:1.62-464.fc37 fedora 71 k perl-SelectSaver noarch 1.02-486.fc37 fedora 17 k perl-Socket x86_64 4:2.032-3.fc36 fedora 55 k perl-Storable x86_64 1:3.25-2.fc36 fedora 96 k perl-Symbol noarch 1.09-486.fc37 fedora 19 k perl-Term-ANSIColor noarch 5.01-480.fc36 fedora 48 k perl-Term-Cap noarch 1.17-479.fc36 fedora 22 k perl-Text-ParseWords noarch 3.30-479.fc36 fedora 16 k perl-Text-Tabs+Wrap noarch 2021.0814-2.fc36 fedora 22 k perl-Time-Local noarch 2:1.300-479.fc36 fedora 34 k perl-constant noarch 1.33-480.fc36 fedora 23 k perl-if noarch 0.60.900-486.fc37 fedora 19 k perl-interpreter x86_64 4:5.34.1-486.fc37 fedora 76 k perl-libs x86_64 4:5.34.1-486.fc37 fedora 2.1 M perl-mro x86_64 1.25-486.fc37 fedora 33 k perl-overload noarch 1.33-486.fc37 fedora 51 k perl-overloading noarch 0.02-486.fc37 fedora 18 k perl-parent noarch 1:0.238-479.fc36 fedora 14 k perl-podlators noarch 1:4.14-479.fc36 fedora 112 k perl-subs noarch 1.04-486.fc37 fedora 17 k perl-vars noarch 1.05-486.fc37 fedora 18 k petsc x86_64 3.16.5-3.fc37 fedora 6.2 M pixman x86_64 0.40.0-5.fc36 fedora 279 k procps-ng x86_64 3.3.17-5.fc37 fedora 330 k pyproject-rpm-macros noarch 1.0.1-1.fc37 fedora 38 k python-pip-wheel noarch 22.0.4-1.fc37 fedora 1.5 M python-rpm-macros noarch 3.10-17.fc36 fedora 18 k python-setuptools-wheel noarch 60.9.3-1.fc37 fedora 608 k python3 x86_64 3.10.4-1.fc37 fedora 27 k python3-Cython x86_64 0.29.28-1.fc37 fedora 2.1 M python3-appdirs noarch 1.4.4-5.fc36 fedora 22 k python3-brotli x86_64 1.0.9-7.fc36 fedora 319 k python3-cairo x86_64 1.20.1-2.fc36 fedora 90 k python3-cycler noarch 0.11.0-2.fc36 fedora 19 k python3-dateutil noarch 1:2.8.2-1.fc37 fedora 309 k python3-fastcache x86_64 1.1.0-12.fc36 fedora 27 k python3-fiat noarch 2019.1.0-9.fc36 fedora 158 k python3-fonttools noarch 4.32.0-1.fc37 fedora 1.5 M python3-fs noarch 2.4.11-10.fc36 fedora 206 k python3-gmpy2 x86_64 2.1.2-2.fc36 fedora 196 k python3-kiwisolver x86_64 1.4.1-1.fc37 fedora 65 k python3-libs x86_64 3.10.4-1.fc37 fedora 7.4 M python3-lxml x86_64 4.7.1-2.fc36 fedora 1.2 M python3-matplotlib x86_64 3.5.1-3.fc36 fedora 3.0 M python3-matplotlib-data noarch 3.5.1-3.fc36 fedora 507 k python3-matplotlib-data-fonts noarch 3.5.1-3.fc36 fedora 2.3 M python3-matplotlib-tk x86_64 3.5.1-3.fc36 fedora 42 k python3-mpi4py-mpich x86_64 3.1.3-2.fc36 fedora 521 k python3-mpich x86_64 4.0.2-1.fc37 fedora 8.7 k python3-mpmath noarch 1.2.1-3.fc36 fedora 843 k python3-munkres noarch 1.1.2-11.fc36 fedora 22 k python3-numpy-f2py x86_64 1:1.22.0-2.fc36 fedora 261 k python3-olefile noarch 0.46-16.fc36 fedora 55 k python3-packaging noarch 21.3-2.fc36 fedora 72 k python3-pillow x86_64 9.1.0-1.fc37 fedora 722 k python3-pillow-tk x86_64 9.1.0-1.fc37 fedora 27 k python3-pyglet noarch 1.5.16-5.fc36 fedora 1.3 M python3-pyparsing noarch 2.4.7-10.fc36 fedora 151 k python3-pytz noarch 2022.1-1.fc37 fedora 47 k python3-rpm-generators noarch 12-14.fc37 fedora 31 k python3-rpm-macros noarch 3.10-17.fc36 fedora 15 k python3-scipy x86_64 1.8.0-3.fc37 fedora 18 M python3-six noarch 1.16.0-5.fc36 fedora 36 k python3-sympy noarch 1.10.1-1.fc37 fedora 11 M python3-tkinter x86_64 3.10.4-1.fc37 fedora 322 k rhash x86_64 1.4.2-2.fc36 fedora 185 k scotch x86_64 6.1.2-2.fc36 fedora 388 k suitesparse x86_64 5.10.1-2.fc36 fedora 1.1 M suitesparse64 x86_64 5.10.1-2.fc36 fedora 1.1 M sundials x86_64 5.8.0-4.fc36 fedora 1.0 M tbb x86_64 2020.3-9.fc35 fedora 170 k tcl x86_64 1:8.6.12-2.fc36 fedora 1.1 M tk x86_64 1:8.6.12-2.fc36 fedora 1.6 M vim-filesystem noarch 2:8.2.4701-2.fc37 fedora 22 k xml-common noarch 0.6.3-58.fc36 fedora 31 k Transaction Summary ================================================================================ Install 253 Packages Total download size: 244 M Installed size: 1.0 G Downloading Packages: (1/253): annobin-docs-10.65-1.fc37.noarch.rpm 263 kB/s | 89 kB 00:00 (2/253): SuperLU-5.3.0-2.fc37.x86_64.rpm 509 kB/s | 188 kB 00:00 (3/253): Lmod-8.6.16-1.fc37.x86_64.rpm 542 kB/s | 229 kB 00:00 (4/253): annobin-plugin-gcc-10.65-1.fc37.x86_64 8.5 MB/s | 881 kB 00:00 (5/253): boost-atomic-1.76.0-10.fc37.x86_64.rpm 378 kB/s | 20 kB 00:00 (6/253): boost-chrono-1.76.0-10.fc37.x86_64.rpm 611 kB/s | 27 kB 00:00 (7/253): boost-1.76.0-10.fc37.x86_64.rpm 120 kB/s | 14 kB 00:00 (8/253): boost-container-1.76.0-10.fc37.x86_64. 538 kB/s | 40 kB 00:00 (9/253): boost-contract-1.76.0-10.fc37.x86_64.r 701 kB/s | 47 kB 00:00 (10/253): boost-context-1.76.0-10.fc37.x86_64.r 232 kB/s | 18 kB 00:00 (11/253): boost-coroutine-1.76.0-10.fc37.x86_64 994 kB/s | 34 kB 00:00 (12/253): boost-date-time-1.76.0-10.fc37.x86_64 371 kB/s | 16 kB 00:00 (13/253): boost-filesystem-1.76.0-10.fc37.x86_6 2.2 MB/s | 60 kB 00:00 (14/253): boost-fiber-1.76.0-10.fc37.x86_64.rpm 808 kB/s | 42 kB 00:00 (15/253): boost-graph-1.76.0-10.fc37.x86_64.rpm 2.4 MB/s | 149 kB 00:00 (16/253): boost-iostreams-1.76.0-10.fc37.x86_64 659 kB/s | 40 kB 00:00 (17/253): boost-locale-1.76.0-10.fc37.x86_64.rp 3.0 MB/s | 218 kB 00:00 (18/253): 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Running transaction test Transaction test succeeded. 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pyproject-rpm-macros-1.0.1-1.fc37.noarch 194/253 Verifying : python-pip-wheel-22.0.4-1.fc37.noarch 195/253 Verifying : python-rpm-macros-3.10-17.fc36.noarch 196/253 Verifying : python-setuptools-wheel-60.9.3-1.fc37.noarch 197/253 Verifying : python3-3.10.4-1.fc37.x86_64 198/253 Verifying : python3-Cython-0.29.28-1.fc37.x86_64 199/253 Verifying : python3-appdirs-1.4.4-5.fc36.noarch 200/253 Verifying : python3-brotli-1.0.9-7.fc36.x86_64 201/253 Verifying : python3-cairo-1.20.1-2.fc36.x86_64 202/253 Verifying : python3-cycler-0.11.0-2.fc36.noarch 203/253 Verifying : python3-dateutil-1:2.8.2-1.fc37.noarch 204/253 Verifying : python3-devel-3.10.4-1.fc37.x86_64 205/253 Verifying : python3-dijitso-2019.1.0-9.fc36.noarch 206/253 Verifying : python3-fastcache-1.1.0-12.fc36.x86_64 207/253 Verifying : python3-ffc-2019.1.0.post0-8.fc36.noarch 208/253 Verifying : python3-fiat-2019.1.0-9.fc36.noarch 209/253 Verifying : python3-fonttools-4.32.0-1.fc37.noarch 210/253 Verifying : python3-fs-2.4.11-10.fc36.noarch 211/253 Verifying : python3-gmpy2-2.1.2-2.fc36.x86_64 212/253 Verifying : python3-kiwisolver-1.4.1-1.fc37.x86_64 213/253 Verifying : python3-libs-3.10.4-1.fc37.x86_64 214/253 Verifying : python3-lxml-4.7.1-2.fc36.x86_64 215/253 Verifying : python3-matplotlib-3.5.1-3.fc36.x86_64 216/253 Verifying : python3-matplotlib-data-3.5.1-3.fc36.noarch 217/253 Verifying : python3-matplotlib-data-fonts-3.5.1-3.fc36.noarc 218/253 Verifying : python3-matplotlib-tk-3.5.1-3.fc36.x86_64 219/253 Verifying : python3-mpi4py-mpich-3.1.3-2.fc36.x86_64 220/253 Verifying : python3-mpich-4.0.2-1.fc37.x86_64 221/253 Verifying : python3-mpmath-1.2.1-3.fc36.noarch 222/253 Verifying : python3-munkres-1.1.2-11.fc36.noarch 223/253 Verifying : python3-numpy-1:1.22.0-2.fc36.x86_64 224/253 Verifying : python3-numpy-f2py-1:1.22.0-2.fc36.x86_64 225/253 Verifying : python3-olefile-0.46-16.fc36.noarch 226/253 Verifying : python3-packaging-21.3-2.fc36.noarch 227/253 Verifying : python3-pillow-9.1.0-1.fc37.x86_64 228/253 Verifying : python3-pillow-tk-9.1.0-1.fc37.x86_64 229/253 Verifying : python3-pyglet-1.5.16-5.fc36.noarch 230/253 Verifying : python3-pyparsing-2.4.7-10.fc36.noarch 231/253 Verifying : python3-pytz-2022.1-1.fc37.noarch 232/253 Verifying : python3-rpm-generators-12-14.fc37.noarch 233/253 Verifying : python3-rpm-macros-3.10-17.fc36.noarch 234/253 Verifying : python3-scipy-1.8.0-3.fc37.x86_64 235/253 Verifying : python3-setuptools-60.9.3-1.fc37.noarch 236/253 Verifying : python3-six-1.16.0-5.fc36.noarch 237/253 Verifying : python3-sympy-1.10.1-1.fc37.noarch 238/253 Verifying : python3-tkinter-3.10.4-1.fc37.x86_64 239/253 Verifying : python3-ufl-2019.1.0-12.fc36.noarch 240/253 Verifying : rhash-1.4.2-2.fc36.x86_64 241/253 Verifying : scotch-6.1.2-2.fc36.x86_64 242/253 Verifying : scotch-devel-6.1.2-2.fc36.x86_64 243/253 Verifying : suitesparse-5.10.1-2.fc36.x86_64 244/253 Verifying : suitesparse64-5.10.1-2.fc36.x86_64 245/253 Verifying : sundials-5.8.0-4.fc36.x86_64 246/253 Verifying : sundials-devel-5.8.0-4.fc36.x86_64 247/253 Verifying : tbb-2020.3-9.fc35.x86_64 248/253 Verifying : tcl-1:8.6.12-2.fc36.x86_64 249/253 Verifying : tk-1:8.6.12-2.fc36.x86_64 250/253 Verifying : vim-filesystem-2:8.2.4701-2.fc37.noarch 251/253 Verifying : xml-common-0.6.3-58.fc36.noarch 252/253 Verifying : zlib-devel-1.2.11-31.fc36.x86_64 253/253 Installed: Lmod-8.6.16-1.fc37.x86_64 SuperLU-5.3.0-2.fc37.x86_64 annobin-docs-10.65-1.fc37.noarch annobin-plugin-gcc-10.65-1.fc37.x86_64 boost-1.76.0-10.fc37.x86_64 boost-atomic-1.76.0-10.fc37.x86_64 boost-chrono-1.76.0-10.fc37.x86_64 boost-container-1.76.0-10.fc37.x86_64 boost-context-1.76.0-10.fc37.x86_64 boost-contract-1.76.0-10.fc37.x86_64 boost-coroutine-1.76.0-10.fc37.x86_64 boost-date-time-1.76.0-10.fc37.x86_64 boost-devel-1.76.0-10.fc37.x86_64 boost-fiber-1.76.0-10.fc37.x86_64 boost-filesystem-1.76.0-10.fc37.x86_64 boost-graph-1.76.0-10.fc37.x86_64 boost-iostreams-1.76.0-10.fc37.x86_64 boost-locale-1.76.0-10.fc37.x86_64 boost-log-1.76.0-10.fc37.x86_64 boost-math-1.76.0-10.fc37.x86_64 boost-nowide-1.76.0-10.fc37.x86_64 boost-numpy3-1.76.0-10.fc37.x86_64 boost-program-options-1.76.0-10.fc37.x86_64 boost-python3-1.76.0-10.fc37.x86_64 boost-random-1.76.0-10.fc37.x86_64 boost-regex-1.76.0-10.fc37.x86_64 boost-serialization-1.76.0-10.fc37.x86_64 boost-stacktrace-1.76.0-10.fc37.x86_64 boost-system-1.76.0-10.fc37.x86_64 boost-test-1.76.0-10.fc37.x86_64 boost-thread-1.76.0-10.fc37.x86_64 boost-timer-1.76.0-10.fc37.x86_64 boost-type_erasure-1.76.0-10.fc37.x86_64 boost-wave-1.76.0-10.fc37.x86_64 cairo-1.17.6-1.fc37.x86_64 cgnslib-4.3.0-1.fc37.x86_64 cgnslib-common-4.3.0-1.fc37.noarch chrpath-0.16-17.fc36.x86_64 cmake-3.23.0-0.1.rc2.fc37.x86_64 cmake-data-3.23.0-0.1.rc2.fc37.noarch cmake-filesystem-3.23.0-0.1.rc2.fc37.x86_64 cmake-rpm-macros-3.23.0-0.1.rc2.fc37.noarch cpp-12.0.1-0.15.fc37.x86_64 dejavu-sans-fonts-2.37-18.fc36.noarch eigen3-devel-3.4.0-6.fc37.noarch emacs-filesystem-1:27.2-11.fc37.noarch expat-2.4.8-1.fc37.x86_64 flexiblas-3.1.3-1.fc37.x86_64 flexiblas-devel-3.1.3-1.fc37.x86_64 flexiblas-netlib-3.1.3-1.fc37.x86_64 flexiblas-netlib64-3.1.3-1.fc37.x86_64 flexiblas-openblas-openmp-3.1.3-1.fc37.x86_64 flexiblas-openblas-openmp64-3.1.3-1.fc37.x86_64 fontconfig-2.14.0-1.fc37.x86_64 fonts-filesystem-1:2.0.5-7.fc36.noarch freetype-2.11.1-2.fc36.x86_64 fribidi-1.0.11-3.fc37.x86_64 gc-8.0.6-2.fc36.x86_64 gcc-12.0.1-0.15.fc37.x86_64 gcc-c++-12.0.1-0.15.fc37.x86_64 gcc-gfortran-12.0.1-0.15.fc37.x86_64 glib2-2.72.0-1.fc37.x86_64 glibc-devel-2.35.9000-12.fc37.x86_64 glibc-headers-x86-2.35.9000-12.fc37.noarch gnupg2-2.3.4-2.fc36.x86_64 gnutls-3.7.3-2.fc36.x86_64 google-noto-fonts-common-20201206-9.fc37.noarch google-noto-sans-vf-fonts-20201206-9.fc37.noarch graphite2-1.3.14-9.fc36.x86_64 groff-base-1.22.4-9.fc36.x86_64 guile22-2.2.7-5.fc36.x86_64 harfbuzz-4.2.0-1.fc37.x86_64 hdf5-1.12.1-5.fc36.x86_64 hdf5-devel-1.12.1-5.fc36.x86_64 hwdata-0.358-1.fc37.noarch hwloc-libs-2.5.0-3.fc36.x86_64 jbigkit-libs-2.1-23.fc36.x86_64 jsoncpp-1.9.5-2.fc36.x86_64 kernel-headers-5.18.0-0.rc2.git0.1.fc37.x86_64 langpacks-core-font-en-3.0-22.fc37.noarch lcms2-2.13.1-1.fc37.x86_64 libICE-1.0.10-8.fc36.x86_64 libSM-1.2.3-10.fc36.x86_64 libX11-1.7.5-1.fc37.x86_64 libX11-common-1.7.5-1.fc37.noarch libX11-xcb-1.7.5-1.fc37.x86_64 libXau-1.0.9-8.fc36.x86_64 libXext-1.3.4-8.fc36.x86_64 libXfixes-6.0.0-3.fc36.x86_64 libXft-2.3.4-2.fc36.x86_64 libXmu-1.1.3-8.fc36.x86_64 libXrender-0.9.10-16.fc36.x86_64 libXt-1.2.1-2.fc36.x86_64 libXxf86vm-1.1.4-18.fc36.x86_64 libaec-1.0.6-2.fc36.x86_64 libaec-devel-1.0.6-2.fc36.x86_64 libassuan-2.5.5-4.fc36.x86_64 libdrm-2.4.110-1.fc37.x86_64 libgfortran-12.0.1-0.15.fc37.x86_64 libglvnd-1:1.4.0-2.fc36.x86_64 libglvnd-glx-1:1.4.0-2.fc36.x86_64 libglvnd-opengl-1:1.4.0-2.fc36.x86_64 libicu-69.1-5.fc36.x86_64 libicu-devel-69.1-5.fc36.x86_64 libimagequant-2.17.0-2.fc36.x86_64 libjpeg-turbo-2.1.3-1.fc37.x86_64 libksba-1.6.0-3.fc36.x86_64 libmpc-1.2.1-4.fc36.x86_64 libpciaccess-0.16-6.fc36.x86_64 libpng-2:1.6.37-12.fc36.x86_64 libqhull_r-1:7.2.1-9.fc36.x86_64 libquadmath-12.0.1-0.15.fc37.x86_64 libquadmath-devel-12.0.1-0.15.fc37.x86_64 libraqm-0.8.0-1.fc36.x86_64 libstdc++-devel-12.0.1-0.15.fc37.x86_64 libtiff-4.3.0-6.fc37.x86_64 libtool-ltdl-2.4.7-1.fc37.x86_64 libuv-1:1.44.1-1.fc37.x86_64 libwebp-1.2.2-5.fc37.x86_64 libxcb-1.13.1-9.fc36.x86_64 libxcrypt-devel-4.4.28-1.fc37.x86_64 libxshmfence-1.3-10.fc36.x86_64 libxslt-1.1.35-1.fc37.x86_64 lua-5.4.4-2.fc37.x86_64 lua-filesystem-1.8.0-6.fc36.x86_64 lua-json-1.3.2-19.fc36.noarch lua-lpeg-1.0.2-8.fc36.x86_64 lua-posix-35.1-1.fc37.x86_64 lua-term-0.07-15.fc36.x86_64 make-1:4.3-8.fc37.x86_64 mesa-libGL-22.0.1-1.fc37.x86_64 mesa-libGLU-9.0.1-6.fc36.x86_64 mesa-libglapi-22.0.1-1.fc37.x86_64 mpdecimal-2.5.1-3.fc36.x86_64 mpi4py-common-3.1.3-2.fc36.noarch mpich-4.0.2-1.fc37.x86_64 ncurses-6.2-9.20210508.fc36.x86_64 nettle-3.7.3-3.fc36.x86_64 npth-1.6-8.fc36.x86_64 openblas-0.3.20-1.fc37.x86_64 openblas-openmp-0.3.20-1.fc37.x86_64 openblas-openmp64-0.3.20-1.fc37.x86_64 openjpeg2-2.4.0-8.fc37.x86_64 openldap-compat-2.6.1-2.fc36.x86_64 perl-Carp-1.52-479.fc36.noarch perl-Class-Struct-0.66-486.fc37.noarch perl-DynaLoader-1.50-486.fc37.x86_64 perl-Encode-4:3.17-485.fc37.x86_64 perl-Errno-1.33-486.fc37.x86_64 perl-Exporter-5.76-480.fc36.noarch perl-Fcntl-1.14-486.fc37.x86_64 perl-File-Basename-2.85-486.fc37.noarch perl-File-Path-2.18-479.fc36.noarch perl-File-Temp-1:0.231.100-479.fc36.noarch perl-File-stat-1.09-486.fc37.noarch perl-Getopt-Long-1:2.52-479.fc36.noarch perl-Getopt-Std-1.13-486.fc37.noarch perl-HTTP-Tiny-0.080-2.fc36.noarch perl-IO-1.46-486.fc37.x86_64 perl-IPC-Open3-1.21-486.fc37.noarch perl-MIME-Base64-3.16-479.fc36.x86_64 perl-POSIX-1.97-486.fc37.x86_64 perl-PathTools-3.80-479.fc36.x86_64 perl-Pod-Escapes-1:1.07-479.fc36.noarch perl-Pod-Perldoc-3.28.01-480.fc36.noarch perl-Pod-Simple-1:3.43-3.fc36.noarch perl-Pod-Usage-4:2.01-479.fc36.noarch perl-Scalar-List-Utils-5:1.62-464.fc37.x86_64 perl-SelectSaver-1.02-486.fc37.noarch perl-Socket-4:2.032-3.fc36.x86_64 perl-Storable-1:3.25-2.fc36.x86_64 perl-Symbol-1.09-486.fc37.noarch perl-Term-ANSIColor-5.01-480.fc36.noarch perl-Term-Cap-1.17-479.fc36.noarch perl-Text-ParseWords-3.30-479.fc36.noarch perl-Text-Tabs+Wrap-2021.0814-2.fc36.noarch perl-Time-Local-2:1.300-479.fc36.noarch perl-constant-1.33-480.fc36.noarch perl-if-0.60.900-486.fc37.noarch perl-interpreter-4:5.34.1-486.fc37.x86_64 perl-libs-4:5.34.1-486.fc37.x86_64 perl-mro-1.25-486.fc37.x86_64 perl-overload-1.33-486.fc37.noarch perl-overloading-0.02-486.fc37.noarch perl-parent-1:0.238-479.fc36.noarch perl-podlators-1:4.14-479.fc36.noarch perl-subs-1.04-486.fc37.noarch perl-vars-1.05-486.fc37.noarch petsc-3.16.5-3.fc37.x86_64 petsc-devel-3.16.5-3.fc37.x86_64 pixman-0.40.0-5.fc36.x86_64 procps-ng-3.3.17-5.fc37.x86_64 pybind11-devel-2.9.2-1.fc37.x86_64 pyproject-rpm-macros-1.0.1-1.fc37.noarch python-pip-wheel-22.0.4-1.fc37.noarch python-rpm-macros-3.10-17.fc36.noarch python-setuptools-wheel-60.9.3-1.fc37.noarch python3-3.10.4-1.fc37.x86_64 python3-Cython-0.29.28-1.fc37.x86_64 python3-appdirs-1.4.4-5.fc36.noarch python3-brotli-1.0.9-7.fc36.x86_64 python3-cairo-1.20.1-2.fc36.x86_64 python3-cycler-0.11.0-2.fc36.noarch python3-dateutil-1:2.8.2-1.fc37.noarch python3-devel-3.10.4-1.fc37.x86_64 python3-dijitso-2019.1.0-9.fc36.noarch python3-fastcache-1.1.0-12.fc36.x86_64 python3-ffc-2019.1.0.post0-8.fc36.noarch python3-fiat-2019.1.0-9.fc36.noarch python3-fonttools-4.32.0-1.fc37.noarch python3-fs-2.4.11-10.fc36.noarch python3-gmpy2-2.1.2-2.fc36.x86_64 python3-kiwisolver-1.4.1-1.fc37.x86_64 python3-libs-3.10.4-1.fc37.x86_64 python3-lxml-4.7.1-2.fc36.x86_64 python3-matplotlib-3.5.1-3.fc36.x86_64 python3-matplotlib-data-3.5.1-3.fc36.noarch python3-matplotlib-data-fonts-3.5.1-3.fc36.noarch python3-matplotlib-tk-3.5.1-3.fc36.x86_64 python3-mpi4py-mpich-3.1.3-2.fc36.x86_64 python3-mpich-4.0.2-1.fc37.x86_64 python3-mpmath-1.2.1-3.fc36.noarch python3-munkres-1.1.2-11.fc36.noarch python3-numpy-1:1.22.0-2.fc36.x86_64 python3-numpy-f2py-1:1.22.0-2.fc36.x86_64 python3-olefile-0.46-16.fc36.noarch python3-packaging-21.3-2.fc36.noarch python3-pillow-9.1.0-1.fc37.x86_64 python3-pillow-tk-9.1.0-1.fc37.x86_64 python3-pyglet-1.5.16-5.fc36.noarch python3-pyparsing-2.4.7-10.fc36.noarch python3-pytz-2022.1-1.fc37.noarch python3-rpm-generators-12-14.fc37.noarch python3-rpm-macros-3.10-17.fc36.noarch python3-scipy-1.8.0-3.fc37.x86_64 python3-setuptools-60.9.3-1.fc37.noarch python3-six-1.16.0-5.fc36.noarch python3-sympy-1.10.1-1.fc37.noarch python3-tkinter-3.10.4-1.fc37.x86_64 python3-ufl-2019.1.0-12.fc36.noarch rhash-1.4.2-2.fc36.x86_64 scotch-6.1.2-2.fc36.x86_64 scotch-devel-6.1.2-2.fc36.x86_64 suitesparse-5.10.1-2.fc36.x86_64 suitesparse64-5.10.1-2.fc36.x86_64 sundials-5.8.0-4.fc36.x86_64 sundials-devel-5.8.0-4.fc36.x86_64 tbb-2020.3-9.fc35.x86_64 tcl-1:8.6.12-2.fc36.x86_64 tk-1:8.6.12-2.fc36.x86_64 vim-filesystem-2:8.2.4701-2.fc37.noarch xml-common-0.6.3-58.fc36.noarch zlib-devel-1.2.11-31.fc36.x86_64 Complete! Finish: build setup for dolfin-2019.1.0.post0-30.fc37.src.rpm Start: rpmbuild dolfin-2019.1.0.post0-30.fc37.src.rpm Building target platforms: x86_64 Building for target x86_64 setting SOURCE_DATE_EPOCH=1643500800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.nVlHpb + umask 022 + cd /builddir/build/BUILD + /usr/lib/rpm/redhat/gpgverify --keyring=/builddir/build/SOURCES/3083BE4C722232E28AD0828CBED06106DD22BAB3.gpg --signature=/builddir/build/SOURCES/dolfin-2019.1.0.post0.tar.gz.asc --data=/builddir/build/SOURCES/dolfin-2019.1.0.post0.tar.gz gpgv: Signature made Fri Apr 26 07:47:43 2019 UTC gpgv: using RSA key 3083BE4C722232E28AD0828CBED06106DD22BAB3 gpgv: Good signature from "FEniCS Project Steering Council " + cd /builddir/build/BUILD + rm -rf dolfin-2019.1.0.post0 + /usr/bin/gzip -dc /builddir/build/SOURCES/dolfin-2019.1.0.post0.tar.gz + /usr/bin/tar -xof - + STATUS=0 + '[' 0 -ne 0 ']' + cd dolfin-2019.1.0.post0 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/bin/cat /builddir/build/SOURCES/0001-pkgconfig-drop-irrelevant-part-from-Libs-and-Cflags.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + sed -i -r 's|pybind11==|pybind11>=|' python/setup.py + cat + sed -r -i 's/#include \n\0/' dolfin/geometry/IntersectionConstruction.cpp dolfin/mesh/MeshFunction.h + sed -r -i 's|boost/detail/endian.hpp|boost/endian/arithmetic.hpp|' dolfin/io/VTKFile.cpp dolfin/io/VTKWriter.cpp + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.EhFbyV + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' -f /usr/lib/rpm/generate-rpm-note.sh ']' + /usr/lib/rpm/generate-rpm-note.sh dolfin 2019.1.0.post0-30.fc37 x86_64 + cd dolfin-2019.1.0.post0 + mkdir -p build + cd build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -DH5_USE_110_API' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -DH5_USE_110_API' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON .. -DBLA_VENDOR=FlexiBLAS -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=off -- The C compiler identification is GNU 12.0.1 -- The CXX compiler identification is GNU 12.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_PIPE -- Performing Test HAVE_PIPE - Success -- Performing Test HAVE_PEDANTIC -- Performing Test HAVE_PEDANTIC - Success -- Performing Test HAVE_DEBUG -- Performing Test HAVE_DEBUG - Success -- Performing Test HAVE_O2_OPTIMISATION -- Performing Test HAVE_O2_OPTIMISATION - Success CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (MPI_C) does not match the name of the calling package (MPI). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindMPI.cmake:611 (find_package_handle_standard_args) CMakeLists.txt:227 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Could NOT find MPI_C (missing: MPI_C_LIBRARIES MPI_C_INCLUDE_PATH) CMake Warning (dev) at /usr/share/cmake/Modules/FindPackageHandleStandardArgs.cmake:438 (message): The package name passed to `find_package_handle_standard_args` (MPI_CXX) does not match the name of the calling package (MPI). This can lead to problems in calling code that expects `find_package` result variables (e.g., `_FOUND`) to follow a certain pattern. Call Stack (most recent call first): cmake/modules/FindMPI.cmake:611 (find_package_handle_standard_args) CMakeLists.txt:227 (find_package) This warning is for project developers. Use -Wno-dev to suppress it. -- Could NOT find MPI_CXX (missing: MPI_CXX_LIBRARIES MPI_CXX_INCLUDE_PATH) -- Found Boost: /usr/include (found version "1.76.0") found components: timer filesystem program_options iostreams chrono regex -- Found Eigen3: /usr/include/eigen3 (Required is at least version "3.2.90") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.10.4", minimum required is "3") -- Found UFC: /usr/lib/python3.10/site-packages/ffc/backends/ufc (Required is at least version "2019.1") -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Test PETSC_TEST_RUNS with shared library linking - Success -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Found PETSc: TRUE (found suitable version "3.16.5", minimum required is "3.7") -- Checking for one of the modules 'crayslepc_real;SLEPc' -- SLEPc could not be found. Be sure to set SLEPC_DIR. (missing: SLEPC_FOUND) (Required is at least version "3.7") -- Checking for package 'AMD' -- Checking for package 'UMFPACK' -- Checking for package 'AMD' -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- UMFPACK could not be found. Be sure to set UMFPACK_DIR. (missing: UMFPACK_INCLUDE_DIRS AMD_LIBRARIES BLAS_LIBRARIES UMFPACK_TEST_RUNS) -- Checking for package 'CHOLMOD' -- Checking for package 'AMD' -- A library with BLAS API not found. Please specify library location. -- LAPACK requires BLAS -- CHOLMOD could not be found. Be sure to set CHOLMOD_DIR. (missing: CHOLMOD_INCLUDE_DIRS CHOLMOD_TEST_RUNS) -- Found HDF5: /lib64/libhdf5.so (found version "1.12.1") found components: C -- Checking for Trilinos -- Unable to find Trilinos (>= 12.4.0) -- Trilinos could not be found -- Found ZLIB: /lib64/libz.so (found version "1.2.11") -- The following features have been enabled: * BUILD_SHARED_LIBS, Build DOLFIN with shared libraries. * DOLFIN_AUTO_DETECT_MPI, Detect MPI automatically (turn this off to use the MPI compiler wrappers directly via setting CXX, CXX, FC). * DOLFIN_WITH_LIBRARY_VERSION, Build with library version information. * DOLFIN_ENABLE_DOCS, Enable generation of documentation. * DOLFIN_ENABLE_MPI, Compile with support for MPI. * DOLFIN_ENABLE_PETSC, Compile with support for PETSc. * DOLFIN_ENABLE_SLEPC, Compile with support for SLEPc. * DOLFIN_ENABLE_TRILINOS, Compile with support for Trilinos. * DOLFIN_ENABLE_UMFPACK, Compile with support for UMFPACK. * DOLFIN_ENABLE_CHOLMOD, Compile with support for CHOLMOD. * DOLFIN_ENABLE_SCOTCH, Compile with support for SCOTCH. * DOLFIN_ENABLE_PARMETIS, Compile with support for ParMETIS. * DOLFIN_ENABLE_SUNDIALS, Compile with support for SUNDIALS. * DOLFIN_ENABLE_ZLIB, Compile with support for zlib. * DOLFIN_ENABLE_HDF5, Compile with support for HDF5. -- The following OPTIONAL packages have been found: * PETSc (required version >= 3.7), Portable, Extensible Toolkit for Scientific Computation, Enables the PETSc linear algebra backend * HDF5, Hierarchical Data Format 5 (HDF5), * ZLIB, Compression library, -- The following REQUIRED packages have been found: * Boost, Boost C++ libraries, * Eigen3 (required version >= 3.2.90), Lightweight C++ template library for linear algebra, * PythonInterp (required version >= 3), Interactive high-level object-oriented language, * UFC (required version >= 2019.1), Unified language for form-compilers (part of FFC), * PkgConfig -- The following features have been disabled: * CMAKE_USE_RELATIVE_PATHS, Use relative paths in makefiles and projects. * DOLFIN_ENABLE_CODE_COVERAGE, Enable code coverage. * DOLFIN_ENABLE_BENCHMARKS, Enable benchmark programs. * DOLFIN_SKIP_BUILD_TESTS, Skip build tests for testing usability of dependency packages. * DOLFIN_DEPRECATION_ERROR, Turn deprecation warnings into errors. * DOLFIN_ENABLE_GEOMETRY_DEBUGGING, Enable geometry debugging. * CMAKE_INSTALL_RPATH_USE_LINK_PATH, Add paths to linker search and installed rpath. -- The following OPTIONAL packages have not been found: * MPI, Message Passing Interface (MPI) Enables DOLFIN to run in parallel with MPI * SLEPc (required version >= 3.7), Scalable Library for Eigenvalue Problem Computations, * UMFPACK, Sparse LU factorization library, * BLAS, Basic Linear Algebra Subprograms, * CHOLMOD, Sparse Cholesky factorization library for sparse matrices, -- -- Generating demo source files from reStructuredText -- -------------------------------------------------- extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/auto-adaptive-poisson/cpp/AdaptivePoisson.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/auto-adaptive-poisson/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/biharmonic/cpp/Biharmonic.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/biharmonic/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/built-in-meshes/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/eigenvalue/cpp/StiffnessMatrix.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/eigenvalue/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/hyperelasticity/cpp/HyperElasticity.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/hyperelasticity/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/mixed-poisson/cpp/MixedPoisson.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/mixed-poisson/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/nonmatching-interpolation/cpp/P1.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/nonmatching-interpolation/cpp/P3.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/nonmatching-interpolation/cpp/main.cpp extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/poisson/cpp/Poisson.ufl extract written to /builddir/build/BUILD/dolfin-2019.1.0.post0/demo/documented/poisson/cpp/main.cpp -- -- Generating form files in demo, test and bench directories. May take some time... -- ---------------------------------------------------------------------------------------- -- -- Generating CMakeLists.txt files in demo, test and bench directories -- ------------------------------------------------------------------- -- -- Copying demo and test data to build directory. -- ---------------------------------------------- -- Performing Test HAVE_NO_MULTLINE -- Performing Test HAVE_NO_MULTLINE - Success -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: CMAKE_CXX_FLAGS_RELEASE CMAKE_C_FLAGS_RELEASE CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR -- Build files have been written to: /builddir/build/BUILD/dolfin-2019.1.0.post0/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0 -B/builddir/build/BUILD/dolfin-2019.1.0.post0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0/build/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Compiling form Poisson1D.ufl cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale/Poisson1D.ufl make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Compiling form Poisson2D.ufl cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale/Poisson2D.ufl make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Compiling form Poisson3D.ufl cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale && /usr/bin/python3 -m ffc -l dolfin -O -r auto -o /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale/Poisson3D.ufl make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Built target compile_ale_forms make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveLinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/AdaptiveLinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/adapt.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/adapt.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/AdaptiveNonlinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/AdaptiveNonlinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/adaptivesolve.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/adaptivesolve.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/ErrorControl.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/ErrorControl.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/GenericAdaptiveVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/GoalFunctional.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 1%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/Extrapolation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/marking.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 3%] Building CXX object dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -MF CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o.d -o CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:30: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:110:37: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = double; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:110:37: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable 'status' [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:84:31: required from 'void dolfin::TimeSeries::store_object(MPI_Comm, const T&, double, std::vector&, std::string, std::string) [with T = dolfin::GenericVector; MPI_Comm = int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:168:15: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:84:31: required from 'void dolfin::TimeSeries::store_object(MPI_Comm, const T&, double, std::vector&, std::string, std::string) [with T = dolfin::GenericVector; MPI_Comm = int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/adaptivity/TimeSeries.cpp:168:15: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/ale/ALE.cpp.o -MF CMakeFiles/dolfin.dir/ale/ALE.cpp.o.d -o CMakeFiles/dolfin.dir/ale/ALE.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale/ALE.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -MF CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o.d -o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale/MeshDisplacement.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -DDOLFIN_GIT_COMMIT_HASH=\"unknown\" -DUFC_SIGNATURE=\"1e5e8d5476f82af05ab9c93365d99f971e0284d6\" -MD -MT dolfin/CMakeFiles/dolfin.dir/common/defines.cpp.o -MF CMakeFiles/dolfin.dir/common/defines.cpp.o.d -o CMakeFiles/dolfin.dir/common/defines.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/defines.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/init.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/init.cpp.o -MF CMakeFiles/dolfin.dir/common/init.cpp.o.d -o CMakeFiles/dolfin.dir/common/init.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/init.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/MPI.cpp.o -MF CMakeFiles/dolfin.dir/common/MPI.cpp.o.d -o CMakeFiles/dolfin.dir/common/MPI.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/MPI.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 4%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -MF CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o.d -o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale/HarmonicSmoothing.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 6%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -MF CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o.d -o CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Timer.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/Timer.cpp.o -MF CMakeFiles/dolfin.dir/common/Timer.cpp.o.d -o CMakeFiles/dolfin.dir/common/Timer.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/Timer.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o -MF CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o.d -o CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/UniqueIdGenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 7%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/timing.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/timing.cpp.o -MF CMakeFiles/dolfin.dir/common/timing.cpp.o.d -o CMakeFiles/dolfin.dir/common/timing.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/timing.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/utils.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/utils.cpp.o -MF CMakeFiles/dolfin.dir/common/utils.cpp.o.d -o CMakeFiles/dolfin.dir/common/utils.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/utils.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/common/Variable.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/common/Variable.cpp.o -MF CMakeFiles/dolfin.dir/common/Variable.cpp.o.d -o CMakeFiles/dolfin.dir/common/Variable.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/Variable.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/assemble.cpp.o -MF CMakeFiles/dolfin.dir/fem/assemble.cpp.o.d -o CMakeFiles/dolfin.dir/fem/assemble.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/assemble.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 9%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o -MF CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o.d -o CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/assemble_local.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o -MF CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o.d -o CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/AssemblerBase.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Assembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/Assembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/Assembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/Assembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/Assembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o -MF CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/DiscreteOperators.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 10%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o -MF CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/DirichletBC.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMap.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DofMap.cpp.o -MF CMakeFiles/dolfin.dir/fem/DofMap.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DofMap.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/DofMap.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Equation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/Equation.cpp.o -MF CMakeFiles/dolfin.dir/fem/Equation.cpp.o.d -o CMakeFiles/dolfin.dir/fem/Equation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/Equation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 12%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o -MF CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o.d -o CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/DofMapBuilder.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/DofMapBuilder.cpp: In static member function 'static void dolfin::DofMapBuilder::compute_node_reordering(dolfin::IndexMap&, std::vector&, const std::unordered_map >&, const std::vector&, const std::vector >&, const std::vector&, const std::set&, MPI_Comm)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/DofMapBuilder.cpp:1663:13: warning: unused variable 'it' [-Wunused-variable] 1663 | for (auto it : old_to_new_local) | ^~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o -MF CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o.d -o CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/fem_utils.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o -MF CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o.d -o CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/FiniteElement.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 14%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/Form.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/Form.cpp.o -MF CMakeFiles/dolfin.dir/fem/Form.cpp.o.d -o CMakeFiles/dolfin.dir/fem/Form.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/Form.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o -MF CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LinearTimeDependentProblem.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o -MF CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp: In member function 'void dolfin::LinearVariationalProblem::check_forms() const': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp:114:19: warning: loop variable 'bc' creates a copy from type 'const std::shared_ptr' [-Wrange-loop-construct] 114 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalProblem.cpp:114:19: note: use reference type to prevent copying 114 | for (const auto bc: _bcs) | ^~ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 15%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LocalAssembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshAssembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o -MF CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/LocalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 17%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshDirichletBC.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshForm.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o -MF CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o.d -o CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/MultiMeshDofMap.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 18%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o -MF CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o.d -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp: In member function 'void dolfin::NonlinearVariationalProblem::check_forms() const': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp:156:19: warning: loop variable 'bc' creates a copy from type 'const std::shared_ptr' [-Wrange-loop-construct] 156 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalProblem.cpp:156:19: note: use reference type to prevent copying 156 | for (const auto bc: _bcs) | ^~ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o -MF CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o.d -o CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/NonlinearVariationalSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PointSource.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/PointSource.cpp.o -MF CMakeFiles/dolfin.dir/fem/PointSource.cpp.o.d -o CMakeFiles/dolfin.dir/fem/PointSource.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/PointSource.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/solve.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/solve.cpp.o -MF CMakeFiles/dolfin.dir/fem/solve.cpp.o.d -o CMakeFiles/dolfin.dir/fem/solve.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/solve.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 20%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o -MF CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o.d -o CMakeFiles/dolfin.dir/fem/PETScDMCollection.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.cpp: In static member function 'static std::shared_ptr dolfin::PETScDMCollection::create_transfer_matrix(const dolfin::FunctionSpace&, const dolfin::FunctionSpace&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.cpp:545:15: warning: unused variable 'mend' [-Wunused-variable] 545 | std::size_t mend = finemap->ownership_range().second; | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o -MF CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o.d -o CMakeFiles/dolfin.dir/fem/SparsityPatternBuilder.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/SparsityPatternBuilder.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o -MF CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o.d -o CMakeFiles/dolfin.dir/fem/SystemAssembler.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/SystemAssembler.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 21%] Building CXX object dolfin/CMakeFiles/dolfin.dir/fem/UFC.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/fem/UFC.cpp.o -MF CMakeFiles/dolfin.dir/fem/UFC.cpp.o.d -o CMakeFiles/dolfin.dir/fem/UFC.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/UFC.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o -MF CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o.d -o CMakeFiles/dolfin.dir/function/CoefficientAssigner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/CoefficientAssigner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/assign.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/assign.cpp.o -MF CMakeFiles/dolfin.dir/function/assign.cpp.o.d -o CMakeFiles/dolfin.dir/function/assign.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/assign.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Constant.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/Constant.cpp.o -MF CMakeFiles/dolfin.dir/function/Constant.cpp.o.d -o CMakeFiles/dolfin.dir/function/Constant.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/Constant.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 23%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/Expression.cpp.o -MF CMakeFiles/dolfin.dir/function/Expression.cpp.o.d -o CMakeFiles/dolfin.dir/function/Expression.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/Expression.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -MF CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o.d -o CMakeFiles/dolfin.dir/function/FunctionAssigner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/FunctionAssigner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -MF CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o.d -o CMakeFiles/dolfin.dir/function/FunctionAXPY.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/FunctionAXPY.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 25%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/Function.cpp.o -MF CMakeFiles/dolfin.dir/function/Function.cpp.o.d -o CMakeFiles/dolfin.dir/function/Function.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/Function.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o -MF CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o.d -o CMakeFiles/dolfin.dir/function/FunctionSpace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/FunctionSpace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o -MF CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o.d -o CMakeFiles/dolfin.dir/function/GenericFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/GenericFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshCoefficientAssigner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/MultiMeshCoefficientAssigner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 26%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o -MF CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o.d -o CMakeFiles/dolfin.dir/function/LagrangeInterpolator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/LagrangeInterpolator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshFunctionSpace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/MultiMeshFunctionSpace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/MultiMeshFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 28%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o -MF CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o.d -o CMakeFiles/dolfin.dir/function/MultiMeshSubSpace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/MultiMeshSubSpace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o -MF CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o.d -o CMakeFiles/dolfin.dir/function/SpecialFacetFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/SpecialFacetFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o -MF CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o.d -o CMakeFiles/dolfin.dir/function/SpecialFunctions.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/function/SpecialFunctions.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 29%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/BoxMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/BoxMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/IntervalMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/IntervalMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/RectangleMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/RectangleMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/SphericalShellMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/SphericalShellMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 31%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/UnitDiscMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/UnitDiscMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/UnitTetrahedronMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/UnitTetrahedronMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o -MF CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o.d -o CMakeFiles/dolfin.dir/generation/UnitTriangleMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/generation/UnitTriangleMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 32%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o -MF CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/BoundingBoxTree.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/BoundingBoxTree.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o -MF CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/CollisionPredicates.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/CollisionPredicates.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o -MF CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/ConvexTriangulation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp: In static member function 'static std::vector > dolfin::ConvexTriangulation::_triangulate_1d(const std::vector&, std::size_t)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp:238:10: warning: variable 'collinear' set but not used [-Wunused-but-set-variable] 238 | bool collinear = true; | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp: In function 'dolfin::ConvexTriangulation::_triangulate_graham_scan_3d(std::vector > const&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp:424:46: warning: 'previous_orientation' may be used uninitialized [-Wmaybe-uninitialized] 424 | if (previous_orientation * orientation < 0) | ~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/ConvexTriangulation.cpp:400:20: note: 'previous_orientation' was declared here 400 | double previous_orientation; | ^~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o -MF CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/GeometryDebugging.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp: In static member function 'static void dolfin::GeometryDebugging::print(const std::vector&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:42:20: warning: loop variable 'p' creates a copy from type 'const dolfin::Point' [-Wrange-loop-construct] 42 | for (const Point p : simplex) | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:42:20: note: use reference type to prevent copying 42 | for (const Point p : simplex) | ^ | & /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp: In static member function 'static void dolfin::GeometryDebugging::print(const std::vector&, const std::vector&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:52:20: warning: loop variable 'p' creates a copy from type 'const dolfin::Point' [-Wrange-loop-construct] 52 | for (const Point p : simplex_0) | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:52:20: note: use reference type to prevent copying 52 | for (const Point p : simplex_0) | ^ | & /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:57:20: warning: loop variable 'p' creates a copy from type 'const dolfin::Point' [-Wrange-loop-construct] 57 | for (const Point p : simplex_1) | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryDebugging.cpp:57:20: note: use reference type to prevent copying 57 | for (const Point p : simplex_1) | ^ | & make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o -MF CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/GeometryPredicates.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GeometryPredicates.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/intersect.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/intersect.cpp.o -MF CMakeFiles/dolfin.dir/geometry/intersect.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/intersect.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/intersect.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 34%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o -MF CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/GenericBoundingBoxTree.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/GenericBoundingBoxTree.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -MF CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/MeshPointIntersection.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/MeshPointIntersection.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 35%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -MF CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/IntersectionConstruction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/IntersectionConstruction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/Point.cpp.o -MF CMakeFiles/dolfin.dir/geometry/Point.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/Point.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/Point.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -MF CMakeFiles/dolfin.dir/geometry/predicates.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/predicates.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/predicates.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -MF CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o.d -o CMakeFiles/dolfin.dir/graph/BoostGraphOrdering.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/BoostGraphOrdering.cpp In file included from /usr/include/boost/smart_ptr/detail/sp_thread_sleep.hpp:22, from /usr/include/boost/smart_ptr/detail/yield_k.hpp:23, from /usr/include/boost/smart_ptr/detail/spinlock_gcc_atomic.hpp:14, from /usr/include/boost/smart_ptr/detail/spinlock.hpp:42, from /usr/include/boost/smart_ptr/detail/spinlock_pool.hpp:25, from /usr/include/boost/smart_ptr/shared_ptr.hpp:29, from /usr/include/boost/property_map/vector_property_map.hpp:14, from /usr/include/boost/property_map/property_map.hpp:602, from /usr/include/boost/graph/properties.hpp:19, from /usr/include/boost/graph/compressed_sparse_row_graph.hpp:26, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/BoostGraphOrdering.cpp:23: /usr/include/boost/bind.hpp:36:1: note: '#pragma message: The practice of declaring the Bind placeholders (_1, _2, ...) in the global namespace is deprecated. Please use + using namespace boost::placeholders, or define BOOST_BIND_GLOBAL_PLACEHOLDERS to retain the current behavior.' 36 | BOOST_PRAGMA_MESSAGE( | ^~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -MF CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o.d -o CMakeFiles/dolfin.dir/graph/GraphBuilder.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/GraphBuilder.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/GraphBuilder.cpp: In static member function 'static int32_t dolfin::GraphBuilder::compute_nonlocal_dual_graph(MPI_Comm, const boost::multi_array&, const dolfin::CellType&, int64_t, std::vector >&, FacetCellMap&, std::set&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/GraphBuilder.cpp:364:21: warning: unused variable 'num_vertices_per_cell' [-Wunused-variable] 364 | const std::int8_t num_vertices_per_cell = cell_type.num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 39%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -MF CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o.d -o CMakeFiles/dolfin.dir/graph/GraphColoring.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/GraphColoring.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -MF CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o.d -o CMakeFiles/dolfin.dir/graph/ParMETIS.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/ParMETIS.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 37%] Building CXX object dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -MF CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o.d -o CMakeFiles/dolfin.dir/geometry/SimplexQuadrature.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/SimplexQuadrature.cpp In file included from /usr/include/eigen3/Eigen/Core:166, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/SimplexQuadrature.h:25, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/SimplexQuadrature.cpp:22: In function 'Eigen::internal::aligned_free(void*)', inlined from 'Eigen::internal::conditional_aligned_free(void*)void' at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:259:15, inlined from 'Eigen::internal::conditional_aligned_delete_auto(double*, unsigned long)void' at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:446:34, inlined from 'Eigen::DenseStorage::~DenseStorage()' at /usr/include/eigen3/Eigen/src/Core/DenseStorage.h:621:109, inlined from 'Eigen::PlainObjectBase >::~PlainObjectBase()' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:98:7, inlined from 'Eigen::Matrix::~Matrix()' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:178:7, inlined from 'dolfin::SimplexQuadrature::Chebyshev_Vandermonde_matrix(std::pair >, std::vector > > const&, unsigned long, unsigned long)' at /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/SimplexQuadrature.cpp:598:3: /usr/include/eigen3/Eigen/src/Core/util/Memory.h:203:9: warning: pointer may be used after 'free' [-Wuse-after-free] 203 | free(ptr); | ~~~~^~~~~ In function 'Eigen::internal::aligned_free(void*)', inlined from 'Eigen::internal::conditional_aligned_free(void*)void' at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:259:15, inlined from 'Eigen::internal::conditional_aligned_delete_auto(double*, unsigned long)void' at /usr/include/eigen3/Eigen/src/Core/util/Memory.h:446:34, inlined from 'Eigen::DenseStorage::resize(long, long, long)' at /usr/include/eigen3/Eigen/src/Core/DenseStorage.h:637:77, inlined from 'Eigen::PlainObjectBase >::resize(long, long)' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:285:25, inlined from 'Eigen::internal::resize_if_allowed, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const>, double, double>(Eigen::Matrix&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&, Eigen::internal::assign_op const&)void' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:764:15, inlined from 'Eigen::internal::call_dense_assignment_loop, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::assign_op >(Eigen::Matrix&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&, Eigen::internal::assign_op const&)void' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:778:20, inlined from 'Eigen::internal::Assignment, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::assign_op, Eigen::internal::Dense2Dense, void>::run(Eigen::Matrix&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&, Eigen::internal::assign_op const&)' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31, inlined from 'Eigen::internal::call_assignment_no_alias, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::assign_op >(Eigen::Matrix&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&, Eigen::internal::assign_op const&)void' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from 'Eigen::internal::call_assignment, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::assign_op >(Eigen::Matrix&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&, Eigen::internal::assign_op const&, Eigen::internal::enable_if, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::evaluator_traits, Eigen::Matrix const, Eigen::Matrix const> >::Shape>::value, void*>::type)void' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27, inlined from 'Eigen::internal::call_assignment, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> >(Eigen::Matrix&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&)void' at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:836:18, inlined from 'Eigen::PlainObjectBase >::_set, Eigen::Matrix const, Eigen::Matrix const> >(Eigen::DenseBase, Eigen::Matrix const, Eigen::Matrix const> > const&)Eigen::Matrix&' at /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:779:32, inlined from 'Eigen::Matrix::operator=, Eigen::Matrix const, Eigen::Matrix const> >(Eigen::DenseBase, Eigen::Matrix const, Eigen::Matrix const> > const&)Eigen::Matrix&' at /usr/include/eigen3/Eigen/src/Core/Matrix.h:225:24, inlined from 'dolfin::SimplexQuadrature::Chebyshev_Vandermonde_matrix(std::pair >, std::vector > > const&, unsigned long, unsigned long)' at /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/geometry/SimplexQuadrature.cpp:595:51: /usr/include/eigen3/Eigen/src/Core/util/Memory.h:203:9: note: call to 'free' here 203 | free(ptr); | ~~~~^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o -MF CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o.d -o CMakeFiles/dolfin.dir/graph/SCOTCH.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/SCOTCH.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/base64.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/base64.cpp.o -MF CMakeFiles/dolfin.dir/io/base64.cpp.o.d -o CMakeFiles/dolfin.dir/io/base64.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/base64.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 40%] Building CXX object dolfin/CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o -MF CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o.d -o CMakeFiles/dolfin.dir/graph/ZoltanInterface.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/graph/ZoltanInterface.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/GenericFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/GenericFile.cpp.o -MF CMakeFiles/dolfin.dir/io/GenericFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/GenericFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/GenericFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/File.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/File.cpp.o -MF CMakeFiles/dolfin.dir/io/File.cpp.o.d -o CMakeFiles/dolfin.dir/io/File.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/File.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 42%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5Attribute.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:28: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = double; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:95:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:101:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:107:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:113:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:119:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = double; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:125:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:131:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vectormake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' ; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:137:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:143:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::__cxx11::basic_string; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:151:14: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = double; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:95:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:101:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:107:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:65:31: required from 'void dolfin::HDF5Attribute::set_value(std::string, const T&) [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:113:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = double; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = double; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:125:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable 'status' [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = long unsigned int; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:131:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable 'status' [-Wunused-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, std::vector&) [with T = double; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:137:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:636:15: warning: unused variable 'ndims' [-Wunused-variable] 636 | const int ndims = H5Sget_simple_extent_dims(dataspace, cur_size, max_size); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:642:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 642 | herr_t status = H5Aread(attr_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, std::vector&) [with T = long unsigned int; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:88:31: required from 'void dolfin::HDF5Attribute::get_value(std::string, T&) const [with T = std::vector; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.cpp:143:12: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:636:15: warning: unused variable 'ndims' [-Wunused-variable] 636 | const int ndims = H5Sget_simple_extent_dims(dataspace, cur_size, max_size); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:642:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 642 | herr_t status = H5Aread(attr_id, h5type, attribute_value.data()); | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5Interface.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:26: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static hid_t dolfin::HDF5Interface::open_file(MPI_Comm, std::string, std::string, bool)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:96:10: warning: unused variable 'status' [-Wunused-variable] 96 | herr_t status = H5Pclose(plist_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static void dolfin::HDF5Interface::close_file(hid_t)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:104:10: warning: unused variable 'status' [-Wunused-variable] 104 | herr_t status = H5Fclose(hdf5_file_handle); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static void dolfin::HDF5Interface::flush_file(hid_t)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:110:10: warning: unused variable 'status' [-Wunused-variable] 110 | herr_t status = H5Fflush(hdf5_file_handle, H5F_SCOPE_GLOBAL); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static const std::string dolfin::HDF5Interface::get_attribute_type(hid_t, std::string, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:135:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 135 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static void dolfin::HDF5Interface::delete_attribute(hid_t, std::string, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:196:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 196 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static const std::vector > dolfin::HDF5Interface::list_attributes(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:234:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 234 | herr_t status = H5Aiterate2(dset_id, H5_INDEX_NAME, H5_ITER_INC, &n, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static bool dolfin::HDF5Interface::has_attribute(hid_t, std::string, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:250:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 250 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static bool dolfin::HDF5Interface::has_group(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:272:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 272 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static bool dolfin::HDF5Interface::has_dataset(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:303:10: warning: unused variable 'status' [-Wunused-variable] 303 | herr_t status = H5Pclose(lapl_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static void dolfin::HDF5Interface::add_group(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:336:14: warning: unused variable 'status' [-Wunused-variable] 336 | herr_t status = H5Gclose(group_id_vis); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static int dolfin::HDF5Interface::dataset_rank(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:359:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 359 | herr_t status = H5Sclose(space); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static std::vector dolfin::HDF5Interface::get_dataset_shape(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:387:13: warning: unused variable 'ndims' [-Wunused-variable] 387 | const int ndims = H5Sget_simple_extent_dims(space, size.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:391:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 391 | herr_t status = H5Sclose(space); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static int dolfin::HDF5Interface::num_datasets_in_group(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:405:10: warning: unused variable 'status' [-Wunused-variable] 405 | herr_t status = H5Gget_info_by_name(hdf5_file_handle, group_name.c_str(), | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp: In static member function 'static std::vector > dolfin::HDF5Interface::dataset_list(hid_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.cpp:418:10: warning: variable 'status' set but not used [-Wunused-but-set-variable] 418 | herr_t status; | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5Utility.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Utility.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/pugixml.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/pugixml.cpp.o -MF CMakeFiles/dolfin.dir/io/pugixml.cpp.o.d -o CMakeFiles/dolfin.dir/io/pugixml.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/pugixml.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 43%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/HDF5File.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/HDF5File.cpp.o -MF CMakeFiles/dolfin.dir/io/HDF5File.cpp.o.d -o CMakeFiles/dolfin.dir/io/HDF5File.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:50: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp: In member function 'void dolfin::HDF5File::write(const dolfin::Mesh&, std::size_t, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:446:24: warning: unused variable 'num_cells' [-Wunused-variable] 446 | const std::int64_t num_cells | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp: In member function 'void dolfin::HDF5File::write(const dolfin::Function&, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:918:30: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = plus; _Tp = long unsigned int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 918 | std::bind2nd(std::plus(), offset)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/bits/stl_function.h:1438, from /usr/include/c++/12/string:48, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/ios:42, from /usr/include/c++/12/istream:38, from /usr/include/c++/12/fstream:38, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:23: /usr/include/c++/12/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp: In member function 'void dolfin::HDF5File::read(dolfin::Function&, std::string)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1067:21: warning: unused variable 'num_global_dofs' [-Wunused-variable] 1067 | const std::size_t num_global_dofs = vector_shape[0]; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:172:31: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:181:31: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:222:35: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:257:30: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:465:33: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1046:30: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' ': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1058:30: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1640:33: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1820:30: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:181:31: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, std::vector&) [with T = long unsigned int; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:222:35: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:636:15: warning: unused variable 'ndims' [-Wunused-variable] 636 | const int ndims = H5Sget_simple_extent_dims(dataspace, cur_size, max_size); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:642:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 642 | herr_t status = H5Aread(attr_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:277:33: required from 'void dolfin::HDF5File::write_data(std::string, const std::vector&, std::vector, bool) [with T = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:450:15: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:277:33: required from 'void dolfin::HDF5File::write_data(std::string, const std::vector&, std::vector, bool) [with T = int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:925:13: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:277:33: required from 'void dolfin::HDF5File::write_data(std::string, const std::vector&, std::vector, bool) [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:929:13: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1191:31: required from 'void dolfin::HDF5File::write_mesh_value_collection(const dolfin::MeshValueCollection&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1085:30: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1257:31: required from 'void dolfin::HDF5File::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1091:29: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:440:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 440 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1191:31: required from 'void dolfin::HDF5File::write_mesh_value_collection(const dolfin::MeshValueCollection&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1085:30: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:523:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 523 | herr_t status = H5Awrite(attribute_id, h5type, &attribute_value); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = long unsigned int; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:454:24: required from 'static void dolfin::HDF5Interface::get_attribute(hid_t, std::string, std::string, T&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1257:31: required from 'void dolfin::HDF5File::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) const [with T = long unsigned int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.cpp:1091:29: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:615:12: warning: unused variable 'status' [-Wunused-variable] 615 | herr_t status = H5Aread(attr_id, h5type, &attribute_value); | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/SVGFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/SVGFile.cpp.o -MF CMakeFiles/dolfin.dir/io/SVGFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/SVGFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/SVGFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/RAWFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/RAWFile.cpp.o -MF CMakeFiles/dolfin.dir/io/RAWFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/RAWFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/RAWFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o -MF CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o.d -o CMakeFiles/dolfin.dir/io/VTKWriter.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/VTKWriter.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 45%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/VTKFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/VTKFile.cpp.o -MF CMakeFiles/dolfin.dir/io/VTKFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/VTKFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/VTKFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/X3DFile.cpp.o -MF CMakeFiles/dolfin.dir/io/X3DFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/X3DFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/X3DFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 46%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/X3DOM.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/X3DOM.cpp.o -MF CMakeFiles/dolfin.dir/io/X3DOM.cpp.o.d -o CMakeFiles/dolfin.dir/io/X3DOM.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/X3DOM.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/X3DOM.cpp: In static member function 'static void dolfin::X3DOM::add_menu_color_tab(pugi::xml_node&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/X3DOM.cpp:933:18: warning: variable 'br_node' set but not used [-Wunused-but-set-variable] 933 | pugi::xml_node br_node = xml_node.append_child("br"); | ^~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLFile.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLFunctionData.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp: In static member function 'static void dolfin::XMLFunctionData::build_global_to_cell_dof(std::vector > >&, const dolfin::FunctionSpace&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp:212:23: warning: unused variable 'D' [-Wunused-variable] 212 | const std::size_t D = mesh.topology().dim(); | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp: In static member function 'static void dolfin::XMLFunctionData::build_dof_map(std::vector >&, const dolfin::FunctionSpace&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLFunctionData.cpp:291:23: warning: unused variable 'D' [-Wunused-variable] 291 | const std::size_t D = mesh.topology().dim(); | ^ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o -MF CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/XDMFFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5File.h:32, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:51: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function 'static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function 'void dolfin::XDMFFile::write_checkpoint(const dolfin::Function&, std::string, double, Encoding, bool)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:152:28: warning: variable 'result' set but not used [-Wunused-but-set-variable] 152 | pugi::xml_parse_result result = _xml_doc->load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:184:20: warning: variable 'domain_node' set but not used [-Wunused-but-set-variable] 184 | pugi::xml_node domain_node = xdmf_node.append_child("Domain"); | ^~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function 'void dolfin::XDMFFile::write(const dolfin::Function&, double, Encoding)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:417:20: warning: variable 'domain_node' set but not used [-Wunused-but-set-variable] 417 | pugi::xml_node domain_node = xdmf_node.append_child("Domain"); | ^~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In static member function 'static void dolfin::XDMFFile::add_function(MPI_Comm, pugi::xml_node&, hid_t, std::string, const dolfin::Function&, std::string, const dolfin::Mesh&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1268:30: warning: 'std::binder2nd<_Operation> std::bind2nd(const _Operation&, const _Tp&) [with _Operation = plus; _Tp = long unsigned int]' is deprecated: use 'std::bind' instead [-Wdeprecated-declarations] 1268 | std::bind2nd(std::plus(), offset)); | ~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/12/bits/stl_function.h:1438, from /usr/include/c++/12/string:48, from /usr/include/c++/12/bits/locale_classes.h:40, from /usr/include/c++/12/bits/ios_base.h:41, from /usr/include/c++/12/iomanip:40, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:20: /usr/include/c++/12/backward/binders.h:172:5: note: declared here 172 | bind2nd(const _Operation& __fn, const _Tp& __x) | ^~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function 'void dolfin::XDMFFile::read(dolfin::Mesh&) const': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1326:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] 1326 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In member function 'void dolfin::XDMFFile::read_checkpoint(dolfin::Function&, std::string, int64_t)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1445:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] 1445 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In static member function 'static void dolfin::XDMFFile::build_mesh_quadratic(dolfin::Mesh&, const dolfin::CellType&, int64_t, int64_t, int, int, const pugi::xml_node&, const pugi::xml_node&, const boost::filesystem::path&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1566:13: warning: unused variable 'num_edges_per_cell' [-Wunused-variable] 1566 | const int num_edges_per_cell = cell_type.num_entities(1); | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of 'void dolfin::XDMFFile::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) [with T = int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:778:29: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:806:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] 806 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of 'void dolfin::XDMFFile::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:792:29: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:806:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of 'void dolfin::XDMFFile::read_mesh_value_collection(dolfin::MeshValueCollection&, std::string) [with T = double; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:797:29: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:806:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of 'void dolfin::XDMFFile::read_mesh_function(dolfin::MeshFunction&, std::string) [with T = long unsigned int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1119:21: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2435:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] 2435 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2508:22: warning: unused variable 'num_vertices_per_cell' [-Wunused-variable] 2508 | const unsigned int num_vertices_per_cell = cell_type->num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of 'void dolfin::XDMFFile::read_mesh_function(dolfin::MeshFunction&, std::string) [with T = int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1127:21: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2435:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] 2435 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2508:22: warning: unused variable 'num_vertices_per_cell' [-Wunused-variable] 2508 | const unsigned int num_vertices_per_cell = cell_type->num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp: In instantiation of 'void dolfin::XDMFFile::read_mesh_function(dolfin::MeshFunction&, std::string) [with T = double; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1137:21: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2435:26: warning: variable 'result' set but not used [-Wunused-but-set-variable] 2435 | pugi::xml_parse_result result = xml_doc.load_file(_filename.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2508:22: warning: unused variable 'num_vertices_per_cell' [-Wunused-variable] 2508 | const unsigned int num_vertices_per_cell = cell_type->num_entities(0); | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from 'static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.h:606:18: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1949:33: required from 'static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.h:606:18: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:486:14: warning: unused variable 'status' [-Wunused-variable] 486 | herr_t status = H5Adelete(dset_id, attribute_name.c_str()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:494:12: warning: unused variable 'status' [-Wunused-variable] 494 | herr_t status = H5Oclose(dset_id); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from 'static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:391:16: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from 'static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1293:16: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from 'static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = long unsigned int; MPI_Comm = int]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1509:31: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from 'static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = int; MPI_Comm = int]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1526:36: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = double; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from 'static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = double; MPI_Comm = int]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1541:26: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::read_dataset(hid_t, std::string, std::pair, std::vector&) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:2363:32: required from 'static std::vector dolfin::XDMFFile::get_dataset(MPI_Comm, const pugi::xml_node&, const boost::filesystem::path&, std::pair) [with T = long int; MPI_Comm = int]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1729:55: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:384:15: warning: unused variable 'ndims' [-Wunused-variable] 384 | const int ndims = H5Sget_simple_extent_dims(dataspace, shape.data(), NULL); | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:400:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 400 | herr_t status = H5Sselect_hyperslab(dataspace, H5S_SELECT_SET, | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const std::vector&) [with T = long unsigned int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:491:24: required from 'static void dolfin::HDF5Interface::add_attribute(hid_t, std::string, std::string, const T&) [with T = std::vector; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1949:33: required from 'static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.h:606:18: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:555:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 555 | herr_t status = H5Awrite(attribute_id, h5type, attribute_value.data()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In instantiation of 'static void dolfin::HDF5Interface::write_dataset(hid_t, std::string, const std::vector&, std::pair, std::vector, bool, bool) [with T = long int; hid_t = long int; std::string = std::__cxx11::basic_string]': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1941:33: required from 'static void dolfin::XDMFFile::add_data_item(MPI_Comm, pugi::xml_node&, hid_t, std::string, const T&, std::vector, std::string) [with T = std::vector; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1827:16: required from 'static void dolfin::XDMFFile::add_topology_data(MPI_Comm, pugi::xml_node&, hid_t, std::string, const dolfin::Mesh&, int) [with T = long int; MPI_Comm = int; hid_t = long int; std::string = std::__cxx11::basic_string]' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XDMFFile.cpp:1159:36: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:266:12: warning: variable 'status' set but not used [-Wunused-but-set-variable] 266 | herr_t status; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLParameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLTable.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLTable.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLTable.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLTable.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLTable.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 50%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/xmlutils.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/xmlutils.cpp.o -MF CMakeFiles/dolfin.dir/io/xmlutils.cpp.o.d -o CMakeFiles/dolfin.dir/io/xmlutils.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/xmlutils.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 48%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XMLVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XMLVector.cpp.o -MF CMakeFiles/dolfin.dir/io/XMLVector.cpp.o.d -o CMakeFiles/dolfin.dir/io/XMLVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XMLVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/Amesos2LUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/Amesos2LUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/BelosKrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/BelosKrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 51%] Building CXX object dolfin/CMakeFiles/dolfin.dir/io/XYZFile.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/io/XYZFile.cpp.o -MF CMakeFiles/dolfin.dir/io/XYZFile.cpp.o.d -o CMakeFiles/dolfin.dir/io/XYZFile.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/XYZFile.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/BlockMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/BlockMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/BlockVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/BlockVector.cpp.o -MF CMakeFiles/dolfin.dir/la/BlockVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/BlockVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/BlockVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 53%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/CoordinateMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/CoordinateMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/DefaultFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/DefaultFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/EigenFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenLUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/EigenLUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 54%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenKrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/EigenKrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/EigenMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/GenericLinearSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/GenericLinearSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 56%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/EigenVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/EigenVector.cpp.o -MF CMakeFiles/dolfin.dir/la/EigenVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/EigenVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/EigenVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o -MF CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o.d -o CMakeFiles/dolfin.dir/la/Ifpack2Preconditioner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/Ifpack2Preconditioner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/GenericMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/GenericMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/IndexMap.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/IndexMap.cpp.o -MF CMakeFiles/dolfin.dir/la/IndexMap.cpp.o.d -o CMakeFiles/dolfin.dir/la/IndexMap.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/IndexMap.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o -MF CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o.d -o CMakeFiles/dolfin.dir/la/LinearOperator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/LinearOperator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 57%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/KrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/KrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/LinearSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/LinearSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o -MF CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o.d -o CMakeFiles/dolfin.dir/la/MueluPreconditioner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/MueluPreconditioner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 59%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/LUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/LUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/LUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/LUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/LUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScBaseMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScBaseMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 60%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScLinearOperator.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScLinearOperator.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScKrylovSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp: In member function 'void dolfin::PETScKrylovSolver::monitor(bool)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp:500:77: warning: 'PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)' is deprecated [-Wdeprecated-declarations] 500 | (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/petsc/petscsnes.h:6, from /usr/include/petsc/petscts.h:7, from /usr/include/petsc/petsc.h:29, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScObject.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScBaseMatrix.h:37, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScMatrix.h:41, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/fem/PETScDMCollection.h:28, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.cpp:29: /usr/include/petsc/petscksp.h:385:115: note: declared here 385 | PETSC_DEPRECATED_FUNCTION("Use KSPMonitorTrueResidual() (since version 3.15)") PETSC_STATIC_INLINE PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) {return KSPMonitorTrueResidual(ksp,n,rnorm,vf);} | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScLUSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScLUSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScObject.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScObject.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScObject.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScObject.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScObject.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScOptions.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScOptions.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 62%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 64%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScPreconditioner.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScPreconditioner.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o -MF CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o.d -o CMakeFiles/dolfin.dir/la/SLEPcEigenSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/SLEPcEigenSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/solve.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/solve.cpp.o -MF CMakeFiles/dolfin.dir/la/solve.cpp.o.d -o CMakeFiles/dolfin.dir/la/solve.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/solve.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/PETScVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/PETScVector.cpp.o -MF CMakeFiles/dolfin.dir/la/PETScVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/PETScVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o -MF CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o.d -o CMakeFiles/dolfin.dir/la/TensorLayout.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/TensorLayout.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 65%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o -MF CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o.d -o CMakeFiles/dolfin.dir/la/SparsityPattern.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp: In member function 'void dolfin::SparsityPattern::insert_full_rows_local(const std::vector&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp:261:21: warning: unused variable 'ghosted_size0' [-Wunused-variable] 261 | const std::size_t ghosted_size0 = | ^~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp: In member function 'void dolfin::SparsityPattern::apply()': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/SparsityPattern.cpp:384:21: warning: unused variable 'proc_number' [-Wunused-variable] 384 | const std::size_t proc_number = _mpi_comm.rank(); | ^~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o -MF CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o.d -o CMakeFiles/dolfin.dir/la/TpetraFactory.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/TpetraFactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o -MF CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o.d -o CMakeFiles/dolfin.dir/la/TpetraMatrix.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/TpetraMatrix.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o -MF CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o.d -o CMakeFiles/dolfin.dir/la/TpetraVector.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/TpetraVector.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o -MF CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o.d -o CMakeFiles/dolfin.dir/la/TrilinosParameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/TrilinosParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 67%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o -MF CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o.d -o CMakeFiles/dolfin.dir/la/test_nullspace.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/test_nullspace.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Event.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Event.cpp.o -MF CMakeFiles/dolfin.dir/log/Event.cpp.o.d -o CMakeFiles/dolfin.dir/log/Event.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/Event.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 68%] Building CXX object dolfin/CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o -MF CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o.d -o CMakeFiles/dolfin.dir/la/VectorSpaceBasis.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/VectorSpaceBasis.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/log.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/log.cpp.o -MF CMakeFiles/dolfin.dir/log/log.cpp.o.d -o CMakeFiles/dolfin.dir/log/log.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/log.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/LogManager.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/LogManager.cpp.o -MF CMakeFiles/dolfin.dir/log/LogManager.cpp.o.d -o CMakeFiles/dolfin.dir/log/LogManager.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/LogManager.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 70%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Logger.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Logger.cpp.o -MF CMakeFiles/dolfin.dir/log/Logger.cpp.o.d -o CMakeFiles/dolfin.dir/log/Logger.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/Logger.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/LogStream.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/LogStream.cpp.o -MF CMakeFiles/dolfin.dir/log/LogStream.cpp.o.d -o CMakeFiles/dolfin.dir/log/LogStream.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/LogStream.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Progress.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Progress.cpp.o -MF CMakeFiles/dolfin.dir/log/Progress.cpp.o.d -o CMakeFiles/dolfin.dir/log/Progress.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/Progress.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/basic.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/math/basic.cpp.o -MF CMakeFiles/dolfin.dir/math/basic.cpp.o.d -o CMakeFiles/dolfin.dir/math/basic.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/math/basic.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/Lagrange.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/math/Lagrange.cpp.o -MF CMakeFiles/dolfin.dir/math/Lagrange.cpp.o.d -o CMakeFiles/dolfin.dir/math/Lagrange.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/math/Lagrange.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 71%] Building CXX object dolfin/CMakeFiles/dolfin.dir/log/Table.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/log/Table.cpp.o -MF CMakeFiles/dolfin.dir/log/Table.cpp.o.d -o CMakeFiles/dolfin.dir/log/Table.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/log/Table.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 73%] Building CXX object dolfin/CMakeFiles/dolfin.dir/math/Legendre.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/math/Legendre.cpp.o -MF CMakeFiles/dolfin.dir/math/Legendre.cpp.o.d -o CMakeFiles/dolfin.dir/math/Legendre.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/math/Legendre.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/BoundaryMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/BoundaryMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/BoundaryComputation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/BoundaryComputation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 75%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Cell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Cell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Cell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Cell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/Cell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/CellType.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/CellType.cpp.o -MF CMakeFiles/dolfin.dir/mesh/CellType.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/CellType.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/CellType.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o -MF CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/DynamicMeshEditor.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/DynamicMeshEditor.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Edge.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Edge.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Edge.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Edge.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/Edge.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Face.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Face.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Face.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Face.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/Face.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 76%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o -MF CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/DistributedMeshTools.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/DistributedMeshTools.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/FacetCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/FacetCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 78%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Facet.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Facet.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Facet.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Facet.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/Facet.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/HexahedronCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/HexahedronCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/IntervalCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/IntervalCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshColoring.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshColoring.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 79%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o -MF CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/LocalMeshData.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/LocalMeshData.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshConnectivity.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshConnectivity.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshData.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshData.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshDomains.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshDomains.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 81%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/Mesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/Mesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshEditor.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshEditor.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshEntity.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshEntity.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshGeometry.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshGeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 82%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshFunction.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshOrdering.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshOrdering.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 84%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshHierarchy.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshHierarchy.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshQuality.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshQuality.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshRenumbering.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp: In static member function 'static dolfin::Mesh dolfin::MeshRenumbering::renumber_by_color(const dolfin::Mesh&, std::vector)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp:149:42: warning: variable 'insert' set but not used [-Wunused-but-set-variable] 149 | std::pair insert | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp: In static member function 'static void dolfin::MeshRenumbering::compute_renumbering(const dolfin::Mesh&, const std::vector&, std::vector&, std::vector&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp:167:21: warning: unused variable 'num_cells' [-Wunused-variable] 167 | const std::size_t num_cells = mesh.num_cells(); | ^~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshRenumbering.cpp:204:35: warning: unused variable 'colors_old' [-Wunused-variable] 204 | const std::vector& colors_old = mesh_coloring->second.first; | ^~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshPartitioning.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshPartitioning.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshPartitioning.cpp: In static member function 'static int32_t dolfin::MeshPartitioning::distribute_cells(MPI_Comm, const dolfin::LocalMeshData&, const std::vector&, const std::map >&, boost::multi_array&, std::vector&, std::vector&, std::map >&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshPartitioning.cpp:727:21: warning: unused variable 'num_local_cells' [-Wunused-variable] 727 | const std::size_t num_local_cells = mesh_data.topology.cell_vertices.size(); | ^~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 85%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshSmoothing.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshSmoothing.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshTopology.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshTopology.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MeshTransformation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshTransformation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/PeriodicBoundaryComputation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/PeriodicBoundaryComputation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/PointCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/PointCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 87%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/MultiMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp: In member function 'void dolfin::MultiMesh::_build_quadrature_rules_overlap(std::size_t)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:778:55: warning: loop variable 'cutting' creates a copy from type 'const std::pair' [-Wrange-loop-construct] 778 | for (const std::pair cutting : cutting_cells) | ^~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:778:55: note: use reference type to prevent copying 778 | for (const std::pair cutting : cutting_cells) | ^~~~~~~ | & /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp: In member function 'void dolfin::MultiMesh::_build_quadrature_rules_interface(std::size_t)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:931:21: warning: loop variable 'cut_i' creates a copy from type 'const std::pair > >' [-Wrange-loop-construct] 931 | for (const auto cut_i: cmap) | ^~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:931:21: note: use reference type to prevent copying 931 | for (const auto cut_i: cmap) | ^~~~~ | & /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:995:25: warning: loop variable 'boundary_cell_index_j' creates a copy from type 'const std::pair' [-Wrange-loop-construct] 995 | for (const auto boundary_cell_index_j: full_to_bdry[cutting_part_j][cutting_cell_index_j]) | ^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MultiMesh.cpp:995:25: note: use reference type to prevent copying 995 | for (const auto boundary_cell_index_j: full_to_bdry[cutting_part_j][cutting_cell_index_j]) | ^~~~~~~~~~~~~~~~~~~~~ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/QuadrilateralCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/QuadrilateralCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 89%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o -MF CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/SubDomain.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/SubDomain.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o -MF CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/SubMesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/SubMesh.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/TetrahedronCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/TetrahedronCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o -MF CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/TriangleCell.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/TriangleCell.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 90%] Building CXX object dolfin/CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o -MF CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o.d -o CMakeFiles/dolfin.dir/mesh/TopologyComputation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/TopologyComputation.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o -MF CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o.d -o CMakeFiles/dolfin.dir/multistage/MultiStageScheme.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp: In member function 'void dolfin::MultiStageScheme::_check_arguments()': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:228:23: warning: loop variable 'bc' creates a copy from type 'const std::shared_ptr' [-Wrange-loop-construct] 228 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:228:23: note: use reference type to prevent copying 228 | for (const auto bc: _bcs) | ^~ | & /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:260:23: warning: loop variable 'bc' creates a copy from type 'const std::shared_ptr' [-Wrange-loop-construct] 260 | for (const auto bc: _bcs) | ^~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/MultiStageScheme.cpp:260:23: note: use reference type to prevent copying 260 | for (const auto bc: _bcs) | ^~ | & make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o -MF CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o.d -o CMakeFiles/dolfin.dir/multistage/RKSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/RKSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 92%] Building CXX object dolfin/CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o -MF CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o.d -o CMakeFiles/dolfin.dir/multistage/PointIntegralSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/multistage/PointIntegralSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/NewtonSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/NewtonSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/PETScSNESSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp: In member function 'void dolfin::PETScSNESSolver::set_linear_solver_parameters()': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp:520:79: warning: 'PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)' is deprecated [-Wdeprecated-declarations] 520 | (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.h:31, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScSNESSolver.cpp:35: /usr/include/petsc/petscksp.h:385:115: note: declared here 385 | PETSC_DEPRECATED_FUNCTION("Use KSPMonitorTrueResidual() (since version 3.15)") PETSC_STATIC_INLINE PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) {return KSPMonitorTrueResidual(ksp,n,rnorm,vf);} | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 93%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/PETScTAOSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp: In member function 'void dolfin::PETScTAOSolver::set_ksp_options()': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:580:77: warning: 'PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)' is deprecated [-Wdeprecated-declarations] 580 | (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScKrylovSolver.h:31, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/PETScTAOSolver.cpp:31: /usr/include/petsc/petscksp.h:385:115: note: declared here 385 | PETSC_DEPRECATED_FUNCTION("Use KSPMonitorTrueResidual() (since version 3.15)") PETSC_STATIC_INLINE PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) {return KSPMonitorTrueResidual(ksp,n,rnorm,vf);} | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o -MF CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o.d -o CMakeFiles/dolfin.dir/nls/TAOLinearBoundSolver.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp: In member function 'void dolfin::TAOLinearBoundSolver::set_ksp_options()': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:416:86: warning: 'PetscErrorCode KSPMonitorTrueResidualNorm(KSP, PetscInt, PetscReal, PetscViewerAndFormat*)' is deprecated [-Wdeprecated-declarations] 416 | ierr = KSPMonitorSet(ksp, (PetscErrorCode (*)(KSP,PetscInt,PetscReal,void*)) KSPMonitorTrueResidualNorm, | ^~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/petsc/petscsnes.h:6, from /usr/include/petsc/petscts.h:7, from /usr/include/petsc/petsc.h:29, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/common/SubSystemsManager.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScObject.h:24, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScBaseMatrix.h:37, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/la/PETScMatrix.h:41, from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/nls/TAOLinearBoundSolver.cpp:29: /usr/include/petsc/petscksp.h:385:115: note: declared here 385 | PETSC_DEPRECATED_FUNCTION("Use KSPMonitorTrueResidual() (since version 3.15)") PETSC_STATIC_INLINE PetscErrorCode KSPMonitorTrueResidualNorm(KSP ksp, PetscInt n, PetscReal rnorm, PetscViewerAndFormat *vf) {return KSPMonitorTrueResidual(ksp,n,rnorm,vf);} | ^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o -MF CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o.d -o CMakeFiles/dolfin.dir/parameter/GlobalParameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/parameter/GlobalParameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 95%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o -MF CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o.d -o CMakeFiles/dolfin.dir/parameter/Parameter.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/parameter/Parameter.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o -MF CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/BisectionRefinement1D.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o -MF CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o.d -o CMakeFiles/dolfin.dir/parameter/Parameters.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/parameter/Parameters.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o -MF CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/LocalMeshCoarsening.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 96%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o -MF CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/ParallelRefinement.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 98%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/refine.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/refine.cpp.o -MF CMakeFiles/dolfin.dir/refinement/refine.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/refine.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/refine.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 98%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o -MF CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/PlazaRefinementND.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [100%] Building CXX object dolfin/CMakeFiles/dolfin.dir/ts/CVode.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/ts/CVode.cpp.o -MF CMakeFiles/dolfin.dir/ts/CVode.cpp.o.d -o CMakeFiles/dolfin.dir/ts/CVode.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ts/CVode.cpp make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 98%] Building CXX object dolfin/CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Ddolfin_EXPORTS -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -I/builddir/build/BUILD/dolfin-2019.1.0.post0/build -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -O2 -g -DNDEBUG -fPIC -std=c++11 -MD -MT dolfin/CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o -MF CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o.d -o CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/RegularCutRefinement.cpp /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/RegularCutRefinement.cpp: In static member function 'static void dolfin::RegularCutRefinement::refine_marked(dolfin::Mesh&, const dolfin::Mesh&, const std::vector&, const dolfin::IndexSet&)': /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/refinement/RegularCutRefinement.cpp:323:19: warning: unused variable 'twin_marker' [-Wunused-variable] 323 | const int twin_marker = refinement_markers[bisection_twin]; | ^~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [100%] Linking CXX shared library libdolfin.so cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/cmake -E cmake_link_script CMakeFiles/dolfin.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g 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CMakeFiles/dolfin.dir/adaptivity/Extrapolation.cpp.o CMakeFiles/dolfin.dir/adaptivity/GenericAdaptiveVariationalSolver.cpp.o CMakeFiles/dolfin.dir/adaptivity/GoalFunctional.cpp.o CMakeFiles/dolfin.dir/adaptivity/marking.cpp.o CMakeFiles/dolfin.dir/adaptivity/TimeSeries.cpp.o CMakeFiles/dolfin.dir/ale/ALE.cpp.o CMakeFiles/dolfin.dir/ale/HarmonicSmoothing.cpp.o CMakeFiles/dolfin.dir/ale/MeshDisplacement.cpp.o CMakeFiles/dolfin.dir/common/defines.cpp.o CMakeFiles/dolfin.dir/common/init.cpp.o CMakeFiles/dolfin.dir/common/MPI.cpp.o CMakeFiles/dolfin.dir/common/SubSystemsManager.cpp.o CMakeFiles/dolfin.dir/common/Timer.cpp.o CMakeFiles/dolfin.dir/common/timing.cpp.o CMakeFiles/dolfin.dir/common/UniqueIdGenerator.cpp.o CMakeFiles/dolfin.dir/common/utils.cpp.o CMakeFiles/dolfin.dir/common/Variable.cpp.o CMakeFiles/dolfin.dir/fem/assemble.cpp.o CMakeFiles/dolfin.dir/fem/assemble_local.cpp.o CMakeFiles/dolfin.dir/fem/AssemblerBase.cpp.o CMakeFiles/dolfin.dir/fem/Assembler.cpp.o CMakeFiles/dolfin.dir/fem/DirichletBC.cpp.o CMakeFiles/dolfin.dir/fem/DiscreteOperators.cpp.o CMakeFiles/dolfin.dir/fem/DofMapBuilder.cpp.o CMakeFiles/dolfin.dir/fem/DofMap.cpp.o CMakeFiles/dolfin.dir/fem/Equation.cpp.o CMakeFiles/dolfin.dir/fem/fem_utils.cpp.o CMakeFiles/dolfin.dir/fem/FiniteElement.cpp.o CMakeFiles/dolfin.dir/fem/Form.cpp.o CMakeFiles/dolfin.dir/fem/LinearTimeDependentProblem.cpp.o CMakeFiles/dolfin.dir/fem/LinearVariationalProblem.cpp.o CMakeFiles/dolfin.dir/fem/LinearVariationalSolver.cpp.o CMakeFiles/dolfin.dir/fem/LocalAssembler.cpp.o CMakeFiles/dolfin.dir/fem/LocalSolver.cpp.o CMakeFiles/dolfin.dir/fem/MultiMeshAssembler.cpp.o CMakeFiles/dolfin.dir/fem/MultiMeshDirichletBC.cpp.o CMakeFiles/dolfin.dir/fem/MultiMeshDofMap.cpp.o CMakeFiles/dolfin.dir/fem/MultiMeshForm.cpp.o CMakeFiles/dolfin.dir/fem/NonlinearVariationalProblem.cpp.o CMakeFiles/dolfin.dir/fem/NonlinearVariationalSolver.cpp.o CMakeFiles/dolfin.dir/fem/PointSource.cpp.o 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CMakeFiles/dolfin.dir/refinement/BisectionRefinement1D.cpp.o CMakeFiles/dolfin.dir/refinement/LocalMeshCoarsening.cpp.o CMakeFiles/dolfin.dir/refinement/ParallelRefinement.cpp.o CMakeFiles/dolfin.dir/refinement/PlazaRefinementND.cpp.o CMakeFiles/dolfin.dir/refinement/refine.cpp.o CMakeFiles/dolfin.dir/refinement/RegularCutRefinement.cpp.o CMakeFiles/dolfin.dir/ts/CVode.cpp.o /usr/lib64/libboost_timer.so /usr/lib64/libboost_filesystem.so /usr/lib64/libboost_program_options.so /usr/lib64/libboost_iostreams.so /lib64/libhdf5.so /lib64/libz.so /usr/lib64/libboost_chrono.so /usr/lib64/libboost_regex.so /usr/lib64/libpetsc.so cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin && /usr/bin/cmake -E cmake_symlink_library libdolfin.so.2019.1.0 libdolfin.so.2019.1 libdolfin.so make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [100%] Built target dolfin make[1]: Leaving directory 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/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/multistage/RKSolver.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/dolfin_nls.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/NewtonSolver.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/NonlinearProblem.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/OptimisationProblem.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/PETScSNESSolver.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/PETScTAOSolver.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/nls/TAOLinearBoundSolver.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/parameter/dolfin_parameter.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/parameter/GlobalParameters.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/parameter/Parameter.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/parameter/Parameters.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/refinement/BisectionRefinement1D.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/refinement/dolfin_refinement.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/refinement/LocalMeshCoarsening.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/include/dolfin/refinement/ParallelRefinement.h -- 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/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINTargets.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINTargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/FindPETSc.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/FindSLEPc.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINConfig.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINConfigVersion.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/UseDOLFIN.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/pkgconfig/dolfin.pc ---------------------------------------------------------------------------- DOLFIN has now been installed in /usr and the demo programs have been installed in /usr/share/dolfin/demo Before rushing off to try the demos, don't forget to update your environment variables. This can be done easily using the helper file 'dolfin.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/share/dolfin/dolfin.conf For future reference, we recommend that you add this command to your configuration (.bashrc, .profile or similar). ---------------------------------------------------------------------------- + cd ../python + VERBOSE=1 + CMAKE_PREFIX_PATH=/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake + CMAKE_SKIP_INSTALL_RPATH=yes + CMAKE_SKIP_RPATH=yes + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -Wno-unused-variable -DH5_USE_110_API' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -s' running build running build_py creating build creating build/lib.linux-x86_64-3.10 creating build/lib.linux-x86_64-3.10/dolfin copying dolfin/__init__.py -> build/lib.linux-x86_64-3.10/dolfin creating build/lib.linux-x86_64-3.10/dolfin/common copying dolfin/common/timer.py -> build/lib.linux-x86_64-3.10/dolfin/common copying dolfin/common/plotting.py -> build/lib.linux-x86_64-3.10/dolfin/common copying dolfin/common/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/common creating build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/specialfunctions.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/multimeshfunctionspace.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/multimeshfunction.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/jit.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/functionspace.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/function.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/expression.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/constant.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/argument.py -> build/lib.linux-x86_64-3.10/dolfin/function copying dolfin/function/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/function creating build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/solving.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/solvers.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/projection.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/problem.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/norms.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/multimeshdirichletbc.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/interpolation.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/formmanipulations.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/form.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/errorcontrolgenerator.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/dirichletbc.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/assembling.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/adaptivesolving.py -> build/lib.linux-x86_64-3.10/dolfin/fem copying dolfin/fem/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/fem creating build/lib.linux-x86_64-3.10/dolfin/la copying dolfin/la/solver.py -> build/lib.linux-x86_64-3.10/dolfin/la copying dolfin/la/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/la creating build/lib.linux-x86_64-3.10/dolfin/io copying dolfin/io/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/io creating build/lib.linux-x86_64-3.10/dolfin/jit copying dolfin/jit/pybind11jit.py -> build/lib.linux-x86_64-3.10/dolfin/jit copying dolfin/jit/jit.py -> build/lib.linux-x86_64-3.10/dolfin/jit copying dolfin/jit/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/jit creating build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/ufl_util.py -> build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/svgtools.py -> build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/subdomain.py -> build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/meshvaluecollection.py -> build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/meshfunction.py -> build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/ale.py -> build/lib.linux-x86_64-3.10/dolfin/mesh copying dolfin/mesh/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/mesh creating build/lib.linux-x86_64-3.10/dolfin/multistage copying dolfin/multistage/rushlarsenschemes.py -> build/lib.linux-x86_64-3.10/dolfin/multistage copying dolfin/multistage/multistagesolvers.py -> build/lib.linux-x86_64-3.10/dolfin/multistage copying dolfin/multistage/multistagescheme.py -> build/lib.linux-x86_64-3.10/dolfin/multistage copying dolfin/multistage/factorize.py -> build/lib.linux-x86_64-3.10/dolfin/multistage copying dolfin/multistage/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/multistage creating build/lib.linux-x86_64-3.10/dolfin/parameter copying dolfin/parameter/__init__.py -> build/lib.linux-x86_64-3.10/dolfin/parameter creating build/lib.linux-x86_64-3.10/dolfin_utils creating build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/xml_writer.py -> build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/meshconvert.py -> build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/abaqus.py -> build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert copying dolfin_utils/meshconvert/__init__.py -> build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert creating build/lib.linux-x86_64-3.10/dolfin_utils/test copying dolfin_utils/test/skips.py -> build/lib.linux-x86_64-3.10/dolfin_utils/test copying dolfin_utils/test/paths.py -> build/lib.linux-x86_64-3.10/dolfin_utils/test copying dolfin_utils/test/fixtures.py -> build/lib.linux-x86_64-3.10/dolfin_utils/test copying dolfin_utils/test/__init__.py -> build/lib.linux-x86_64-3.10/dolfin_utils/test creating build/lib.linux-x86_64-3.10/fenics copying fenics/__init__.py -> build/lib.linux-x86_64-3.10/fenics running build_ext Re-run cmake no build system arguments -- The C compiler identification is GNU 12.0.1 -- The CXX compiler identification is GNU 12.0.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found PythonInterp: /usr/bin/python3 (found version "3.10.4") -- Found PythonLibs: /usr/lib64/libpython3.10.so -- Performing Test HAS_FLTO -- Performing Test HAS_FLTO - Success -- Found pybind11: /usr/include (found version "2.9.2") -- Found PkgConfig: /usr/bin/pkg-config (found version "1.8.0") -- Checking for one of the modules 'craypetsc_real;PETSc' -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of PetscInt -- Check size of PetscInt - done -- Checking for package 'PETSc4Py' -- PETSc4py could not be found. Be sure to set PYTHONPATH appropriately. (missing: PETSC4PY_INCLUDE_DIRS PETSC4PY_VERSION) Traceback (most recent call last): File "", line 1, in ModuleNotFoundError: No module named 'mpi4py' jfa: mpi4py not found -- Could NOT find MPI4PY (missing: MPI4PY_INCLUDE_DIR) -- Configuring done -- Generating done -- Build files have been written to: /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10 /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0/python -B/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10 --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10//CMakeFiles/progress.marks /usr/bin/gmake -f CMakeFiles/Makefile2 all gmake[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/depend gmake[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10' cd /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10 && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0/python /builddir/build/BUILD/dolfin-2019.1.0.post0/python /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10 /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10 /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10/CMakeFiles/cpp.dir/DependInfo.cmake --color= gmake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10' /usr/bin/gmake -f CMakeFiles/cpp.dir/build.make CMakeFiles/cpp.dir/build gmake[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10' [ 4%] Building CXX object CMakeFiles/cpp.dir/src/dolfin.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/dolfin.cpp.o -MF CMakeFiles/cpp.dir/src/dolfin.cpp.o.d -o CMakeFiles/cpp.dir/src/dolfin.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/dolfin.cpp [ 9%] Building CXX object CMakeFiles/cpp.dir/src/parameter.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/parameter.cpp.o -MF CMakeFiles/cpp.dir/src/parameter.cpp.o.d -o CMakeFiles/cpp.dir/src/parameter.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/parameter.cpp [ 14%] Building CXX object CMakeFiles/cpp.dir/src/adaptivity.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/adaptivity.cpp.o -MF CMakeFiles/cpp.dir/src/adaptivity.cpp.o.d -o CMakeFiles/cpp.dir/src/adaptivity.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/adaptivity.cpp [ 19%] Building CXX object CMakeFiles/cpp.dir/src/ale.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/ale.cpp.o -MF CMakeFiles/cpp.dir/src/ale.cpp.o.d -o CMakeFiles/cpp.dir/src/ale.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/ale.cpp [ 23%] Building CXX object CMakeFiles/cpp.dir/src/common.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/common.cpp.o -MF CMakeFiles/cpp.dir/src/common.cpp.o.d -o CMakeFiles/cpp.dir/src/common.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/common.cpp [ 28%] Building CXX object CMakeFiles/cpp.dir/src/fem.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/fem.cpp.o -MF CMakeFiles/cpp.dir/src/fem.cpp.o.d -o CMakeFiles/cpp.dir/src/fem.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/fem.cpp [ 33%] Building CXX object CMakeFiles/cpp.dir/src/function.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/function.cpp.o -MF CMakeFiles/cpp.dir/src/function.cpp.o.d -o CMakeFiles/cpp.dir/src/function.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/function.cpp [ 38%] Building CXX object CMakeFiles/cpp.dir/src/generation.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/generation.cpp.o -MF CMakeFiles/cpp.dir/src/generation.cpp.o.d -o CMakeFiles/cpp.dir/src/generation.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/generation.cpp [ 42%] Building CXX object CMakeFiles/cpp.dir/src/geometry.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/geometry.cpp.o -MF CMakeFiles/cpp.dir/src/geometry.cpp.o.d -o CMakeFiles/cpp.dir/src/geometry.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/geometry.cpp [ 47%] Building CXX object CMakeFiles/cpp.dir/src/graph.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/graph.cpp.o -MF CMakeFiles/cpp.dir/src/graph.cpp.o.d -o CMakeFiles/cpp.dir/src/graph.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/graph.cpp [ 52%] Building CXX object CMakeFiles/cpp.dir/src/log.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/log.cpp.o -MF CMakeFiles/cpp.dir/src/log.cpp.o.d -o CMakeFiles/cpp.dir/src/log.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/log.cpp [ 57%] Building CXX object CMakeFiles/cpp.dir/src/math.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/math.cpp.o -MF CMakeFiles/cpp.dir/src/math.cpp.o.d -o CMakeFiles/cpp.dir/src/math.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/math.cpp [ 61%] Building CXX object CMakeFiles/cpp.dir/src/mesh.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/mesh.cpp.o -MF CMakeFiles/cpp.dir/src/mesh.cpp.o.d -o CMakeFiles/cpp.dir/src/mesh.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/mesh.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/BoundaryMesh.h:28, from /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/mesh.cpp:27: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = bool; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:73:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ /usr/include/pybind11/detail/init.h:203:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ /usr/include/pybind11/pybind11.h:1615:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/mesh.cpp:429:5: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] 398 | const std::size_t D = _mesh->topology().dim(); | ^ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = int; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:73:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ /usr/include/pybind11/detail/init.h:203:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ /usr/include/pybind11/pybind11.h:1615:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/mesh.cpp:430:5: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = double; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:73:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ /usr/include/pybind11/detail/init.h:203:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ /usr/include/pybind11/pybind11.h:1615:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/mesh.cpp:431:5: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h: In instantiation of ‘dolfin::MeshFunction::MeshFunction(std::shared_ptr, std::size_t, const dolfin::MeshDomains&) [with T = long unsigned int; std::size_t = long unsigned int]’: /usr/include/pybind11/detail/init.h:73:12: required from ‘Class* pybind11::detail::initimpl::construct_or_initialize(Args&& ...) [with Class = dolfin::MeshFunction; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; typename std::enable_if::value, int>::type = 0]’ /usr/include/pybind11/detail/init.h:203:70: required from ‘static void pybind11::detail::initimpl::constructor::execute(Class&, const Extra& ...) [with Class = pybind11::class_, std::shared_ptr >, dolfin::Variable>; Extra = {}; typename std::enable_if<(! Class::has_alias), int>::type = 0; Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}]’ /usr/include/pybind11/pybind11.h:1615:21: required from ‘pybind11::class_& pybind11::class_::def(const pybind11::detail::initimpl::constructor&, const Extra& ...) [with Args = {std::shared_ptr, long unsigned int, const dolfin::MeshDomains&}; Extra = {}; type_ = dolfin::MeshFunction; options = {std::shared_ptr >, dolfin::Variable}]’ /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/mesh.cpp:432:5: required from here /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/mesh/MeshFunction.h:398:23: warning: unused variable ‘D’ [-Wunused-variable] [ 66%] Building CXX object CMakeFiles/cpp.dir/src/multistage.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/multistage.cpp.o -MF CMakeFiles/cpp.dir/src/multistage.cpp.o.d -o CMakeFiles/cpp.dir/src/multistage.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/multistage.cpp [ 71%] Building CXX object CMakeFiles/cpp.dir/src/ts.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/ts.cpp.o -MF CMakeFiles/cpp.dir/src/ts.cpp.o.d -o CMakeFiles/cpp.dir/src/ts.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/ts.cpp [ 76%] Building CXX object CMakeFiles/cpp.dir/src/io.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/io.cpp.o -MF CMakeFiles/cpp.dir/src/io.cpp.o.d -o CMakeFiles/cpp.dir/src/io.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/io.cpp In file included from /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Attribute.h:30, from /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/io.cpp:26: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::add_attribute_value(hid_t, std::string, const T&) [with T = std::__cxx11::basic_string; hid_t = long int; std::string = std::__cxx11::basic_string]’: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:578:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 578 | herr_t status = H5Tset_size(datatype_id, attribute_value.size()); | ^~~~~~ /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h: In static member function ‘static void dolfin::HDF5Interface::get_attribute_value(hid_t, hid_t, T&) [with T = std::__cxx11::basic_string; hid_t = long int]’: /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/io/HDF5Interface.h:661:12: warning: variable ‘status’ set but not used [-Wunused-but-set-variable] 661 | herr_t status = H5Tset_size(memtype, string_length); | ^~~~~~ [ 80%] Building CXX object CMakeFiles/cpp.dir/src/la.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/la.cpp.o -MF CMakeFiles/cpp.dir/src/la.cpp.o.d -o CMakeFiles/cpp.dir/src/la.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/la.cpp [ 85%] Building CXX object CMakeFiles/cpp.dir/src/nls.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/nls.cpp.o -MF CMakeFiles/cpp.dir/src/nls.cpp.o.d -o CMakeFiles/cpp.dir/src/nls.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/nls.cpp [ 90%] Building CXX object CMakeFiles/cpp.dir/src/refinement.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/refinement.cpp.o -MF CMakeFiles/cpp.dir/src/refinement.cpp.o.d -o CMakeFiles/cpp.dir/src/refinement.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/refinement.cpp [ 95%] Building CXX object CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o /usr/bin/g++ -DDOLFIN_VERSION=\"2019.1.0\" -DHAS_HDF5 -DHAS_PETSC -DHAS_ZLIB -DNDEBUG -Dcpp_EXPORTS -isystem /usr/include/python3.10 -isystem /usr/lib/python3.10/site-packages/ffc/backends/ufc -isystem /usr/include/eigen3 -isystem /usr/include/petsc -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -fPIC -fvisibility=hidden -flto -fno-fat-lto-objects -std=c++11 -MD -MT CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -MF CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o.d -o CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -c /builddir/build/BUILD/dolfin-2019.1.0.post0/python/src/MPICommWrapper.cpp [100%] Linking CXX shared library ../lib.linux-x86_64-3.10/dolfin/cpp.cpython-310-x86_64-linux-gnu.so /usr/bin/cmake -E cmake_link_script CMakeFiles/cpp.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -DH5_USE_110_API -DVERSION_INFO=\"2019.1.0\" -I/builddir/build/BUILD/dolfin-2019.1.0.post0 -O3 -DNDEBUG -flto -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld -shared -Wl,-soname,cpp.cpython-310-x86_64-linux-gnu.so -o ../lib.linux-x86_64-3.10/dolfin/cpp.cpython-310-x86_64-linux-gnu.so CMakeFiles/cpp.dir/src/dolfin.cpp.o CMakeFiles/cpp.dir/src/parameter.cpp.o CMakeFiles/cpp.dir/src/adaptivity.cpp.o CMakeFiles/cpp.dir/src/ale.cpp.o CMakeFiles/cpp.dir/src/common.cpp.o CMakeFiles/cpp.dir/src/fem.cpp.o CMakeFiles/cpp.dir/src/function.cpp.o CMakeFiles/cpp.dir/src/generation.cpp.o CMakeFiles/cpp.dir/src/geometry.cpp.o CMakeFiles/cpp.dir/src/graph.cpp.o CMakeFiles/cpp.dir/src/log.cpp.o CMakeFiles/cpp.dir/src/math.cpp.o CMakeFiles/cpp.dir/src/mesh.cpp.o CMakeFiles/cpp.dir/src/multistage.cpp.o CMakeFiles/cpp.dir/src/ts.cpp.o CMakeFiles/cpp.dir/src/io.cpp.o CMakeFiles/cpp.dir/src/la.cpp.o CMakeFiles/cpp.dir/src/nls.cpp.o CMakeFiles/cpp.dir/src/refinement.cpp.o CMakeFiles/cpp.dir/src/MPICommWrapper.cpp.o -Wl,-rpath,/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64 /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/libdolfin.so.2019.1.0 /usr/lib64/libboost_timer.so /usr/lib64/libboost_chrono.so /lib64/libhdf5.so /usr/lib64/libpetsc.so /usr/bin/strip /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/lib.linux-x86_64-3.10/dolfin/cpp.cpython-310-x86_64-linux-gnu.so gmake[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10' [100%] Built target cpp gmake[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0/python/build/temp.linux-x86_64-3.10/CMakeFiles 0 + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.GwfH5h + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 '!=' / ']' + rm -rf /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 ++ dirname /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd dolfin-2019.1.0.post0 + cd build + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 'INSTALL=/usr/bin/install -p' /usr/bin/cmake -S/builddir/build/BUILD/dolfin-2019.1.0.post0 -B/builddir/build/BUILD/dolfin-2019.1.0.post0/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0/build/CMakeFiles /builddir/build/BUILD/dolfin-2019.1.0.post0/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/ale/CMakeFiles/compile_ale_forms.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/ale/CMakeFiles/compile_ale_forms.dir/build.make dolfin/ale/CMakeFiles/compile_ale_forms.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Nothing to be done for 'dolfin/ale/CMakeFiles/compile_ale_forms.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [ 0%] Built target compile_ale_forms /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/depend make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' cd /builddir/build/BUILD/dolfin-2019.1.0.post0/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/dolfin-2019.1.0.post0 /builddir/build/BUILD/dolfin-2019.1.0.post0/dolfin /builddir/build/BUILD/dolfin-2019.1.0.post0/build /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin /builddir/build/BUILD/dolfin-2019.1.0.post0/build/dolfin/CMakeFiles/dolfin.dir/DependInfo.cmake --color= make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/make -f dolfin/CMakeFiles/dolfin.dir/build.make dolfin/CMakeFiles/dolfin.dir/build make[2]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[2]: Nothing to be done for 'dolfin/CMakeFiles/dolfin.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' [100%] Built target dolfin make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/dolfin-2019.1.0.post0/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/dolfin-2019.1.0.post0/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "RelWithDebInfo" -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-convert -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-order -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-plot -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/dolfin.conf -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-version -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/fenics-version -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-get-demos -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide/cpp/Forms.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide/cpp/Forms.ufl -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/waveguide/cpp/Forms.py -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/time-series -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/time-series/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/time-series/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/time-series/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/Poisson.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/sym-dirichlet-bc/cpp/Poisson.ufl -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/submesh -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/submesh/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/submesh/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/submesh/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/spatial-coordinates -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/spatial-coordinates/cpp/SpatialCoordinates.ufl -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/refinement -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/refinement/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/refinement/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/refinement/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D/cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D/cpp/CMakeLists.txt -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D/cpp/Poisson.h -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D/cpp/main.cpp -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D/cpp/Poisson.ufl -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D-in-2D -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/demo/undocumented/poisson1D-in-2D/cpp -- Installing: 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/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINTargets.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINTargets-relwithdebinfo.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/FindPETSc.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/FindSLEPc.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINConfig.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/DOLFINConfigVersion.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake/UseDOLFIN.cmake -- Installing: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/pkgconfig/dolfin.pc ---------------------------------------------------------------------------- DOLFIN has now been installed in /usr and the demo programs have been installed in /usr/share/dolfin/demo Before rushing off to try the demos, don't forget to update your environment variables. This can be done easily using the helper file 'dolfin.conf' which sets the appropriate variables (for users of the Bash shell). To update your environment variables, run the following command: source /usr/share/dolfin/dolfin.conf For future reference, we recommend that you add this command to your configuration (.bashrc, .profile or similar). ---------------------------------------------------------------------------- + cd ../python + VERBOSE=1 + CMAKE_PREFIX_PATH=/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/cmake + CMAKE_SKIP_INSTALL_RPATH=yes + CMAKE_SKIP_RPATH=yes + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 running install /usr/lib/python3.10/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools. warnings.warn( running install_lib creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10 creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/fenics copying build/lib.linux-x86_64-3.10/fenics/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/fenics creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.10/dolfin_utils/test/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.10/dolfin_utils/test/fixtures.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.10/dolfin_utils/test/paths.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test copying build/lib.linux-x86_64-3.10/dolfin_utils/test/skips.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert/abaqus.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert/meshconvert.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert copying build/lib.linux-x86_64-3.10/dolfin_utils/meshconvert/xml_writer.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin copying build/lib.linux-x86_64-3.10/dolfin/cpp.cpython-310-x86_64-linux-gnu.so -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/parameter copying build/lib.linux-x86_64-3.10/dolfin/parameter/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/parameter creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage copying build/lib.linux-x86_64-3.10/dolfin/multistage/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage copying build/lib.linux-x86_64-3.10/dolfin/multistage/factorize.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage copying build/lib.linux-x86_64-3.10/dolfin/multistage/multistagescheme.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage copying build/lib.linux-x86_64-3.10/dolfin/multistage/multistagesolvers.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage copying build/lib.linux-x86_64-3.10/dolfin/multistage/rushlarsenschemes.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/ale.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/meshfunction.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/meshvaluecollection.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/subdomain.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/svgtools.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh copying build/lib.linux-x86_64-3.10/dolfin/mesh/ufl_util.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit copying build/lib.linux-x86_64-3.10/dolfin/jit/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit copying build/lib.linux-x86_64-3.10/dolfin/jit/jit.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit copying build/lib.linux-x86_64-3.10/dolfin/jit/pybind11jit.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/io copying build/lib.linux-x86_64-3.10/dolfin/io/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/io creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/la copying build/lib.linux-x86_64-3.10/dolfin/la/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/la copying build/lib.linux-x86_64-3.10/dolfin/la/solver.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/la creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/adaptivesolving.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/assembling.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/dirichletbc.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/errorcontrolgenerator.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/form.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/formmanipulations.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/interpolation.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/multimeshdirichletbc.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/norms.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/problem.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/projection.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/solvers.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem copying build/lib.linux-x86_64-3.10/dolfin/fem/solving.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/argument.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/constant.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/expression.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/function.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/functionspace.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/jit.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/multimeshfunction.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/multimeshfunctionspace.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function copying build/lib.linux-x86_64-3.10/dolfin/function/specialfunctions.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function creating /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common copying build/lib.linux-x86_64-3.10/dolfin/common/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common copying build/lib.linux-x86_64-3.10/dolfin/common/plotting.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common copying build/lib.linux-x86_64-3.10/dolfin/common/timer.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common copying build/lib.linux-x86_64-3.10/dolfin/__init__.py -> /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/fenics/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test/fixtures.py to fixtures.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test/paths.py to paths.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/test/skips.py to skips.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert/abaqus.py to abaqus.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert/meshconvert.py to meshconvert.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin_utils/meshconvert/xml_writer.py to xml_writer.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/parameter/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage/factorize.py to factorize.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage/multistagescheme.py to multistagescheme.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage/multistagesolvers.py to multistagesolvers.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/multistage/rushlarsenschemes.py to rushlarsenschemes.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/ale.py to ale.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/meshfunction.py to meshfunction.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/meshvaluecollection.py to meshvaluecollection.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/subdomain.py to subdomain.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/svgtools.py to svgtools.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/mesh/ufl_util.py to ufl_util.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit/jit.py to jit.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/jit/pybind11jit.py to pybind11jit.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/io/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/la/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/la/solver.py to solver.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/adaptivesolving.py to adaptivesolving.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/assembling.py to assembling.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/dirichletbc.py to dirichletbc.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/errorcontrolgenerator.py to errorcontrolgenerator.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/form.py to form.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/formmanipulations.py to formmanipulations.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/interpolation.py to interpolation.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/multimeshdirichletbc.py to multimeshdirichletbc.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/norms.py to norms.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/problem.py to problem.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/projection.py to projection.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/solvers.py to solvers.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/fem/solving.py to solving.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/argument.py to argument.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/constant.py to constant.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/expression.py to expression.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/function.py to function.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/functionspace.py to functionspace.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/jit.py to jit.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/multimeshfunction.py to multimeshfunction.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/multimeshfunctionspace.py to multimeshfunctionspace.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/function/specialfunctions.py to specialfunctions.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common/__init__.py to __init__.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common/plotting.py to plotting.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/common/timer.py to timer.cpython-310.pyc byte-compiling /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/__init__.py to __init__.cpython-310.pyc writing byte-compilation script '/tmp/tmp1dot8qlc.py' /usr/bin/python3 /tmp/tmp1dot8qlc.py removing /tmp/tmp1dot8qlc.py running install_egg_info running egg_info creating fenics_dolfin.egg-info writing fenics_dolfin.egg-info/PKG-INFO writing dependency_links to fenics_dolfin.egg-info/dependency_links.txt writing requirements to fenics_dolfin.egg-info/requires.txt writing top-level names to fenics_dolfin.egg-info/top_level.txt writing manifest file 'fenics_dolfin.egg-info/SOURCES.txt' reading manifest file 'fenics_dolfin.egg-info/SOURCES.txt' writing manifest file 'fenics_dolfin.egg-info/SOURCES.txt' Copying fenics_dolfin.egg-info to /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/fenics_dolfin-2019.1.0-py3.10.egg-info running install_scripts + rm -rfv /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/__pycache__ + sed -r -i '1 {s|#!/usr/bin/env python.*|#!/usr/bin/python3|}' /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-order /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-plot /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/bin/dolfin-convert + rm /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/dolfin/dolfin.conf + chrpath /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/cpp.cpython-310-x86_64-linux-gnu.so /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/cpp.cpython-310-x86_64-linux-gnu.so: RUNPATH=/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64 + chrpath --delete /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/cpp.cpython-310-x86_64-linux-gnu.so + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 2019.1.0.post0-30.fc37 --unique-debug-suffix -2019.1.0.post0-30.fc37.x86_64 --unique-debug-src-base dolfin-2019.1.0.post0-30.fc37.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/dolfin-2019.1.0.post0 extracting debug info from /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/libdolfin.so.2019.1.0 original debug info size: 156460kB, size after compression: 138040kB /usr/bin/sepdebugcrcfix: Updated 1 CRC32s, 0 CRC32s did match. 9132 blocks + /usr/lib/rpm/check-buildroot grep: /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10/site-packages/dolfin/cpp.cpython-310-x86_64-linux-gnu.so: binary file matches + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs mangling shebang in /usr/bin/dolfin-get-demos from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/bin/fenics-version from /bin/bash to #!/usr/bin/bash mangling shebang in /usr/bin/dolfin-version from /bin/bash to #!/usr/bin/bash + /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 Bytecompiling .py files below /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/lib64/python3.10 using python3.10 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.XjQbfa + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-D_FORTIFY_SOURCE=2 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -I/usr/lib64/gfortran/modules' + export FCFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -Wl,-dT,/builddir/build/BUILD/dolfin-2019.1.0.post0/.package_note-dolfin-2019.1.0.post0-30.fc37.x86_64.ld' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + '[' -f /usr/lib/rpm/generate-rpm-note.sh ']' + /usr/lib/rpm/generate-rpm-note.sh dolfin 2019.1.0.post0-30.fc37 x86_64 + cd dolfin-2019.1.0.post0 + ctest -V -j2 UpdateCTestConfiguration from :/builddir/build/BUILD/dolfin-2019.1.0.post0/DartConfiguration.tcl UpdateCTestConfiguration from :/builddir/build/BUILD/dolfin-2019.1.0.post0/DartConfiguration.tcl Test project /builddir/build/BUILD/dolfin-2019.1.0.post0 Constructing a list of tests Updating test list for fixtures Added 0 tests to meet fixture requirements Checking test dependency graph... Checking test dependency graph end No tests were found!!! + RPM_EC=0 ++ jobs -p + exit 0 Processing files: dolfin-2019.1.0.post0-30.fc37.x86_64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.kmdMtn + umask 022 + cd /builddir/build/BUILD + cd dolfin-2019.1.0.post0 + DOCDIR=/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/doc/dolfin + export LC_ALL=C + LC_ALL=C + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/doc/dolfin + cp -pr README.rst /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/doc/dolfin + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.2aqH6W + umask 022 + cd /builddir/build/BUILD + cd dolfin-2019.1.0.post0 + LICENSEDIR=/builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/licenses/dolfin + export LC_ALL=C + LC_ALL=C + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/licenses/dolfin + cp -pr COPYING /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/licenses/dolfin + cp -pr COPYING.LESSER /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/licenses/dolfin + cp -pr AUTHORS /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64/usr/share/licenses/dolfin + RPM_EC=0 ++ jobs -p + exit 0 Provides: dolfin = 2019.1.0.post0-30.fc37 dolfin(x86-64) = 2019.1.0.post0-30.fc37 libdolfin.so.2019.1()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash libboost_filesystem.so.1.76.0()(64bit) libboost_iostreams.so.1.76.0()(64bit) libboost_program_options.so.1.76.0()(64bit) libboost_timer.so.1.76.0()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libhdf5.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libpetsc.so.3.16()(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.22)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libz.so.1()(64bit) rtld(GNU_HASH) Processing files: dolfin-devel-2019.1.0.post0-30.fc37.x86_64 Provides: dolfin-devel = 2019.1.0.post0-30.fc37 dolfin-devel(x86-64) = 2019.1.0.post0-30.fc37 pkgconfig(dolfin) = 2019.1.0 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/pkg-config libdolfin.so.2019.1()(64bit) Processing files: python3-dolfin-2019.1.0.post0-30.fc37.x86_64 Provides: python-dolfin = 2019.1.0.post0-30.fc37 python3-dolfin = 2019.1.0.post0-30.fc37 python3-dolfin(x86-64) = 2019.1.0.post0-30.fc37 python3.10-dolfin = 2019.1.0.post0-30.fc37 python3.10dist(fenics-dolfin) = 2019.1 python3dist(fenics-dolfin) = 2019.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.10dist(fenics-dijitso) < 2019.2~~ with python3.10dist(fenics-dijitso) >= 2019.1) (python3.10dist(fenics-ffc) < 2019.2~~ with python3.10dist(fenics-ffc) >= 2019.1) (python3.10dist(fenics-ufl) < 2019.2~~ with python3.10dist(fenics-ufl) >= 2019.1) /usr/bin/python3 libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.4)(64bit) libdolfin.so.2019.1()(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.29)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.13)(64bit) libstdc++.so.6(CXXABI_1.3.2)(64bit) libstdc++.so.6(CXXABI_1.3.3)(64bit) libstdc++.so.6(CXXABI_1.3.5)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.18)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) python(abi) = 3.10 python3.10dist(numpy) python3.10dist(pkgconfig) python3.10dist(pybind11) >= 2.2.4 rtld(GNU_HASH) Obsoletes: python-dolfin < 2019.1.0.post0-30.fc37 Processing files: dolfin-doc-2019.1.0.post0-30.fc37.noarch Provides: dolfin-doc = 2019.1.0.post0-30.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/bash Processing files: dolfin-debugsource-2019.1.0.post0-30.fc37.x86_64 Provides: dolfin-debugsource = 2019.1.0.post0-30.fc37 dolfin-debugsource(x86-64) = 2019.1.0.post0-30.fc37 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: dolfin-debuginfo-2019.1.0.post0-30.fc37.x86_64 Provides: debuginfo(build-id) = dc95b11a01c384b7a220478101de1b8fcd89014a dolfin-debuginfo = 2019.1.0.post0-30.fc37 dolfin-debuginfo(x86-64) = 2019.1.0.post0-30.fc37 libdolfin.so.2019.1.0-2019.1.0.post0-30.fc37.x86_64.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: dolfin-debugsource(x86-64) = 2019.1.0.post0-30.fc37 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 Wrote: /builddir/build/RPMS/dolfin-doc-2019.1.0.post0-30.fc37.noarch.rpm Wrote: /builddir/build/RPMS/dolfin-2019.1.0.post0-30.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/dolfin-debugsource-2019.1.0.post0-30.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/python3-dolfin-2019.1.0.post0-30.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/dolfin-devel-2019.1.0.post0-30.fc37.x86_64.rpm Wrote: /builddir/build/RPMS/dolfin-debuginfo-2019.1.0.post0-30.fc37.x86_64.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.bVBwCn + umask 022 + cd /builddir/build/BUILD + cd dolfin-2019.1.0.post0 + /usr/bin/rm -rf /builddir/build/BUILDROOT/dolfin-2019.1.0.post0-30.fc37.x86_64 + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild dolfin-2019.1.0.post0-30.fc37.src.rpm Finish: build phase for dolfin-2019.1.0.post0-30.fc37.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-x86_64-1650168589.696153/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/dolfin-2019.1.0.post0-30.fc37.src.rpm) Config(child) 13 minutes 5 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool