Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c20c' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6745477-fedora-rawhide-ppc64le --chroot fedora-rawhide-ppc64le Version: 0.70 PID: 17677 Logging PID: 17678 Task: {'appstream': False, 'background': True, 'build_id': 6745477, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-ppc64le', 'enable_net': False, 'fedora_review': False, 'git_hash': '6d6c47192c97f2eb47c4560eb5b8289ef5db1103', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/ppalka/boost-1.83-all-arches/avogadro2-libs', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'avogadro2-libs', 'package_version': '1.98.1-1', 'project_dirname': 'boost-1.83-all-arches', 'project_name': 'boost-1.83-all-arches', 'project_owner': 'ppalka', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/ppalka/boost-1.83-all-arches/fedora-rawhide-ppc64le/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'ppalka/boost-1.83-all-arches--ppalka', 'source_json': {}, 'source_type': None, 'submitter': 'ppalka', 'tags': [], 'task_id': '6745477-fedora-rawhide-ppc64le', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/ppalka/boost-1.83-all-arches/avogadro2-libs /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/ppalka/boost-1.83-all-arches/avogadro2-libs', '/var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs'... Running: git checkout 6d6c47192c97f2eb47c4560eb5b8289ef5db1103 -- cmd: ['git', 'checkout', '6d6c47192c97f2eb47c4560eb5b8289ef5db1103', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs rc: 0 stdout: stderr: Note: switching to '6d6c47192c97f2eb47c4560eb5b8289ef5db1103'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 6d6c471 automatic import of avogadro2-libs Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading avogadrolibs-1.98.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o avogadrolibs-1.98.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83-all-arches/avogadro2-libs/avogadrolibs-1.98.1.tar.gz/md5/6e8d34caae91cbd1031a194893066cae/avogadrolibs-1.98.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 4494k 100 4494k 0 0 9513k 0 --:--:-- --:--:-- --:--:-- 9503k INFO: Reading stdout from command: md5sum avogadrolibs-1.98.1.tar.gz INFO: Downloading avogenerators-1.98.0.tar.gz INFO: Calling: curl -H Pragma: -o avogenerators-1.98.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83-all-arches/avogadro2-libs/avogenerators-1.98.0.tar.gz/md5/74b508114f30f469256a19ebc4996f87/avogenerators-1.98.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 15676 100 15676 0 0 101k 0 --:--:-- --:--:-- --:--:-- 102k INFO: Reading stdout from command: md5sum avogenerators-1.98.0.tar.gz INFO: Downloading crystals-1.98.0.tar.gz INFO: Calling: curl -H Pragma: -o crystals-1.98.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83-all-arches/avogadro2-libs/crystals-1.98.0.tar.gz/md5/07733a52b8a6572adb353abb6044d6f6/crystals-1.98.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 53.3M 100 53.3M 0 0 66.0M 0 --:--:-- --:--:-- --:--:-- 66.0M INFO: Reading stdout from command: md5sum crystals-1.98.0.tar.gz INFO: Downloading molecules-1.98.0.tar.gz INFO: Calling: curl -H Pragma: -o molecules-1.98.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83-all-arches/avogadro2-libs/molecules-1.98.0.tar.gz/md5/789264f5a03f37bf336d2904abe9cd3d/molecules-1.98.0.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 9720k 100 9720k 0 0 26.6M 0 --:--:-- --:--:-- --:--:-- 26.6M INFO: Reading stdout from command: md5sum molecules-1.98.0.tar.gz Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs/avogadro2-libs.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1702405450.786193 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs/avogadro2-libs.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1702405450.786193 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs/avogadro2-libs.spec) Config(fedora-rawhide-ppc64le) Start: clean chroot Finish: clean chroot Mock Version: 5.2 INFO: Mock Version: 5.2 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1702405450.786193/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1702405450.786193/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/33bc6f2f3f1cd819d826e4e4a44f775712edea249114c18a586774411506d9c6/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/33bc6f2f3f1cd819d826e4e4a44f775712edea249114c18a586774411506d9c6/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 1.7 MB/s | 532 kB 00:00 fedora 16 MB/s | 67 MB 00:04 Package python3-dnf-4.18.2-1.fc40.noarch is already installed. Dependencies resolved. ================================================================================ Package Arch Version Repository Size ================================================================================ Installing: python3-dnf-plugins-core noarch 4.4.4-1.fc40 fedora 317 k Installing dependencies: dbus-libs ppc64le 1:1.14.10-1.fc40 fedora 177 k python3-dateutil noarch 1:2.8.2-11.fc40 fedora 356 k python3-dbus ppc64le 1.3.2-4.fc39 fedora 161 k python3-distro noarch 1.8.0-6.fc39 fedora 49 k python3-six noarch 1.16.0-12.fc39 fedora 41 k python3-systemd ppc64le 235-5.fc39 fedora 108 k Transaction Summary ================================================================================ Install 7 Packages Total download size: 1.2 M Installed size: 4.9 M Downloading Packages: (1/7): dbus-libs-1.14.10-1.fc40.ppc64le.rpm 605 kB/s | 177 kB 00:00 (2/7): python3-distro-1.8.0-6.fc39.noarch.rpm 1.2 MB/s | 49 kB 00:00 (3/7): python3-dbus-1.3.2-4.fc39.ppc64le.rpm 464 kB/s | 161 kB 00:00 (4/7): python3-six-1.16.0-12.fc39.noarch.rpm 1.0 MB/s | 41 kB 00:00 (5/7): python3-systemd-235-5.fc39.ppc64le.rpm 931 kB/s | 108 kB 00:00 (6/7): python3-dateutil-2.8.2-11.fc40.noarch.rp 699 kB/s | 356 kB 00:00 (7/7): python3-dnf-plugins-core-4.4.4-1.fc40.no 1.4 MB/s | 317 kB 00:00 -------------------------------------------------------------------------------- Total 1.8 MB/s | 1.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-systemd-235-5.fc39.ppc64le 1/7 Installing : python3-six-1.16.0-12.fc39.noarch 2/7 Installing : python3-dateutil-1:2.8.2-11.fc40.noarch 3/7 Installing : python3-distro-1.8.0-6.fc39.noarch 4/7 Installing : dbus-libs-1:1.14.10-1.fc40.ppc64le 5/7 Installing : python3-dbus-1.3.2-4.fc39.ppc64le 6/7 Installing : python3-dnf-plugins-core-4.4.4-1.fc40.noarch 7/7 Running scriptlet: python3-dnf-plugins-core-4.4.4-1.fc40.noarch 7/7 Installed: dbus-libs-1:1.14.10-1.fc40.ppc64le python3-dateutil-1:2.8.2-11.fc40.noarch python3-dbus-1.3.2-4.fc39.ppc64le python3-distro-1.8.0-6.fc39.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch python3-six-1.16.0-12.fc39.noarch python3-systemd-235-5.fc39.ppc64le Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 8.4 kB/s | 1.5 kB 00:00 Copr repository 2.2 MB/s | 532 kB 00:00 fedora 97 kB/s | 5.6 kB 00:00 Dependencies resolved. ================================================================================ Package Arch Version Repo Size ================================================================================ Installing group/module packages: bash ppc64le 5.2.21-2.fc40 fedora 1.9 M bzip2 ppc64le 1.0.8-16.fc39 fedora 53 k coreutils ppc64le 9.4-1.fc40 fedora 1.4 M cpio ppc64le 2.14-5.fc40 fedora 286 k diffutils ppc64le 3.10-3.fc39 fedora 408 k fedora-release-common noarch 40-0.20 fedora 20 k findutils ppc64le 1:4.9.0-6.fc40 fedora 540 k gawk ppc64le 5.2.2-2.fc39 fedora 1.1 M glibc-minimal-langpack ppc64le 2.38.9000-26.fc40 fedora 85 k grep ppc64le 3.11-5.fc40 fedora 308 k gzip ppc64le 1.12-6.fc39 fedora 170 k info ppc64le 7.1-1.fc40 fedora 203 k patch ppc64le 2.7.6-22.fc39 fedora 137 k redhat-rpm-config noarch 271-1.fc40 fedora 81 k rpm-build ppc64le 4.19.0-3.fc40 fedora 80 k sed ppc64le 4.8-14.fc39 fedora 312 k shadow-utils ppc64le 2:4.14.0-2.fc40 fedora 1.3 M tar ppc64le 2:1.35-2.fc40 fedora 884 k unzip ppc64le 6.0-62.fc39 fedora 190 k util-linux ppc64le 2.39.2-1.fc40 fedora 1.3 M which ppc64le 2.21-40.fc39 fedora 43 k xz ppc64le 5.4.5-1.fc40 fedora 560 k Installing dependencies: alternatives ppc64le 1.25-1.fc39 fedora 41 k ansible-srpm-macros noarch 1-11.fc39 fedora 21 k audit-libs ppc64le 3.1.2-5.fc40 fedora 132 k authselect ppc64le 1.4.3-1.fc40 fedora 150 k authselect-libs ppc64le 1.4.3-1.fc40 fedora 253 k basesystem noarch 11-18.fc39 fedora 7.2 k binutils ppc64le 2.41-16.fc40 fedora 6.4 M binutils-gold ppc64le 2.41-16.fc40 fedora 1.1 M bzip2-libs ppc64le 1.0.8-16.fc39 fedora 47 k ca-certificates noarch 2023.2.62_v7.0.401-4.fc40 fedora 863 k coreutils-common ppc64le 9.4-1.fc40 fedora 2.1 M cracklib ppc64le 2.9.11-2.fc39 fedora 96 k crypto-policies noarch 20231204-1.git1e3a2e4.fc40 fedora 100 k curl ppc64le 8.5.0-1.fc40 fedora 376 k cyrus-sasl-lib ppc64le 2.1.28-11.fc39 fedora 877 k debugedit ppc64le 5.0-12.fc40 fedora 81 k dwz ppc64le 0.15-3.fc39 fedora 147 k ed ppc64le 1.19-4.fc39 fedora 81 k efi-srpm-macros noarch 5-9.fc39 fedora 22 k elfutils ppc64le 0.190-4.fc40 fedora 581 k elfutils-debuginfod-client ppc64le 0.190-4.fc40 fedora 39 k elfutils-default-yama-scope noarch 0.190-4.fc40 fedora 13 k elfutils-libelf ppc64le 0.190-4.fc40 fedora 203 k elfutils-libs ppc64le 0.190-4.fc40 fedora 295 k fedora-gpg-keys noarch 40-0.2 fedora 130 k fedora-release noarch 40-0.20 fedora 9.3 k fedora-release-identity-basic noarch 40-0.20 fedora 10 k fedora-repos noarch 40-0.2 fedora 9.3 k fedora-repos-rawhide noarch 40-0.2 fedora 8.9 k file ppc64le 5.45-1.fc40 fedora 50 k file-libs ppc64le 5.45-1.fc40 fedora 774 k filesystem ppc64le 3.18-6.fc39 fedora 1.1 M fonts-srpm-macros noarch 1:2.0.5-12.fc39 fedora 26 k forge-srpm-macros noarch 0.2.0-1.fc40 fedora 18 k fpc-srpm-macros noarch 1.3-8.fc39 fedora 7.4 k gdb-minimal ppc64le 14.1-1.fc40 fedora 4.3 M gdbm ppc64le 1:1.23-4.fc39 fedora 161 k gdbm-libs ppc64le 1:1.23-4.fc39 fedora 62 k ghc-srpm-macros noarch 1.6.1-3.fc40 fedora 8.1 k glibc ppc64le 2.38.9000-26.fc40 fedora 2.3 M glibc-common ppc64le 2.38.9000-26.fc40 fedora 381 k glibc-gconv-extra ppc64le 2.38.9000-26.fc40 fedora 2.0 M gmp ppc64le 1:6.2.1-5.fc39 fedora 304 k gnat-srpm-macros noarch 6-3.fc39 fedora 8.8 k go-srpm-macros noarch 3.3.1-1.fc40 fedora 28 k jansson ppc64le 2.13.1-7.fc39 fedora 49 k kernel-srpm-macros noarch 1.0-20.fc39 fedora 10 k keyutils-libs ppc64le 1.6.1-7.fc39 fedora 32 k krb5-libs ppc64le 1.21.2-2.fc40 fedora 850 k libacl ppc64le 2.3.1-11.fc40 fedora 26 k libarchive ppc64le 3.7.2-1.fc40 fedora 477 k libattr ppc64le 2.5.1-9.fc40 fedora 19 k libblkid ppc64le 2.39.2-1.fc40 fedora 133 k libbrotli ppc64le 1.1.0-1.fc40 fedora 380 k libcap ppc64le 2.69-1.fc40 fedora 89 k libcap-ng ppc64le 0.8.3-8.fc40 fedora 33 k libcom_err ppc64le 1.47.0-2.fc39 fedora 27 k libcurl ppc64le 8.5.0-1.fc40 fedora 384 k libeconf ppc64le 0.5.2-1.fc40 fedora 34 k libevent ppc64le 2.1.12-9.fc39 fedora 275 k libfdisk ppc64le 2.39.2-1.fc40 fedora 178 k libffi ppc64le 3.4.4-4.fc39 fedora 38 k libgcc ppc64le 13.2.1-6.fc40 fedora 107 k libgomp ppc64le 13.2.1-6.fc40 fedora 335 k libidn2 ppc64le 2.3.4-3.fc39 fedora 121 k libmount ppc64le 2.39.2-1.fc40 fedora 176 k libnghttp2 ppc64le 1.58.0-1.fc40 fedora 85 k libnsl2 ppc64le 2.0.0-6.fc39 fedora 32 k libpkgconf ppc64le 1.9.5-2.fc39 fedora 42 k libpsl ppc64le 0.21.2-4.fc39 fedora 65 k libpwquality ppc64le 1.4.5-6.fc39 fedora 123 k librtas ppc64le 2.0.4-3.fc39 fedora 70 k libselinux ppc64le 3.6-0.rc2.1.fc40 fedora 101 k libsemanage ppc64le 3.6-0.rc2.1.fc40 fedora 128 k libsepol ppc64le 3.6-0.rc2.1.fc40 fedora 370 k libsigsegv ppc64le 2.14-5.fc39 fedora 28 k libsmartcols ppc64le 2.39.2-1.fc40 fedora 73 k libssh ppc64le 0.10.5-2.fc39 fedora 238 k libssh-config noarch 0.10.5-2.fc39 fedora 9.2 k libstdc++ ppc64le 13.2.1-6.fc40 fedora 998 k libtasn1 ppc64le 4.19.0-3.fc39 fedora 80 k libtirpc ppc64le 1.3.4-0.fc40 fedora 108 k libunistring ppc64le 1.1-5.fc40 fedora 578 k libutempter ppc64le 1.2.1-10.fc39 fedora 27 k libuuid ppc64le 2.39.2-1.fc40 fedora 30 k libverto ppc64le 0.3.2-6.fc39 fedora 22 k libxcrypt ppc64le 4.4.36-2.fc39 fedora 132 k libxml2 ppc64le 2.12.2-2.fc40 fedora 773 k libzstd ppc64le 1.5.5-4.fc39 fedora 336 k lua-libs ppc64le 5.4.6-3.fc39 fedora 149 k lua-srpm-macros noarch 1-9.fc39 fedora 8.6 k lz4-libs ppc64le 1.9.4-4.fc39 fedora 85 k mpfr ppc64le 4.2.1-1.fc40 fedora 353 k ncurses-base noarch 6.4-8.20231001.fc40 fedora 88 k ncurses-libs ppc64le 6.4-8.20231001.fc40 fedora 381 k ocaml-srpm-macros noarch 9-1.fc40 fedora 9.0 k openblas-srpm-macros noarch 2-14.fc39 fedora 7.5 k openldap ppc64le 2.6.6-1.fc39 fedora 287 k openssl-libs ppc64le 1:3.1.4-1.fc40 fedora 2.3 M p11-kit ppc64le 0.25.3-1.fc40 fedora 521 k p11-kit-trust ppc64le 0.25.3-1.fc40 fedora 157 k package-notes-srpm-macros noarch 0.5-9.fc39 fedora 11 k pam ppc64le 1.5.3-8.fc40 fedora 592 k pam-libs ppc64le 1.5.3-8.fc40 fedora 63 k pcre2 ppc64le 10.42-2.fc40 fedora 241 k pcre2-syntax noarch 10.42-2.fc40 fedora 143 k perl-srpm-macros noarch 1-51.fc39 fedora 8.0 k pkgconf ppc64le 1.9.5-2.fc39 fedora 43 k pkgconf-m4 noarch 1.9.5-2.fc39 fedora 14 k pkgconf-pkg-config ppc64le 1.9.5-2.fc39 fedora 9.6 k popt ppc64le 1.19-3.fc39 fedora 71 k publicsuffix-list-dafsa noarch 20230812-1.fc40 fedora 57 k pyproject-srpm-macros noarch 1.10.0-1.fc40 fedora 14 k python-srpm-macros noarch 3.12-5.fc40 fedora 25 k qt5-srpm-macros noarch 5.15.11-1.fc40 fedora 8.3 k qt6-srpm-macros noarch 6.6.1-1.fc40 fedora 8.6 k readline ppc64le 8.2-4.fc39 fedora 229 k rpm ppc64le 4.19.0-3.fc40 fedora 537 k rpm-build-libs ppc64le 4.19.0-3.fc40 fedora 104 k rpm-libs ppc64le 4.19.0-3.fc40 fedora 357 k rpm-sequoia ppc64le 1.5.0-2.fc40 fedora 1.6 M rust-srpm-macros noarch 25.2-2.fc40 fedora 13 k setup noarch 2.14.5-1.fc40 fedora 155 k sqlite-libs ppc64le 3.44.2-1.fc40 fedora 804 k systemd-libs ppc64le 255-1.fc40 fedora 748 k util-linux-core ppc64le 2.39.2-1.fc40 fedora 534 k xxhash-libs ppc64le 0.8.2-1.fc39 fedora 37 k xz-libs ppc64le 5.4.5-1.fc40 fedora 121 k zip ppc64le 3.0-39.fc40 fedora 274 k zlib ppc64le 1.2.13-5.fc40 fedora 100 k zstd ppc64le 1.5.5-4.fc39 fedora 499 k Installing Groups: Buildsystem building group Transaction Summary ================================================================================ Install 153 Packages Total size: 56 M Installed size: 325 M Downloading Packages: [SKIPPED] alternatives-1.25-1.fc39.ppc64le.rpm: Already downloaded [SKIPPED] ansible-srpm-macros-1-11.fc39.noarch.rpm: Already downloaded [SKIPPED] audit-libs-3.1.2-5.fc40.ppc64le.rpm: Already downloaded [SKIPPED] authselect-1.4.3-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] authselect-libs-1.4.3-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] basesystem-11-18.fc39.noarch.rpm: Already downloaded [SKIPPED] bash-5.2.21-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] binutils-2.41-16.fc40.ppc64le.rpm: Already downloaded [SKIPPED] binutils-gold-2.41-16.fc40.ppc64le.rpm: Already downloaded [SKIPPED] bzip2-1.0.8-16.fc39.ppc64le.rpm: Already downloaded [SKIPPED] bzip2-libs-1.0.8-16.fc39.ppc64le.rpm: Already downloaded [SKIPPED] ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch.rpm: Already downloaded [SKIPPED] coreutils-9.4-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] coreutils-common-9.4-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cpio-2.14-5.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cracklib-2.9.11-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] crypto-policies-20231204-1.git1e3a2e4.fc40.noarch.rpm: Already downloaded [SKIPPED] curl-8.5.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cyrus-sasl-lib-2.1.28-11.fc39.ppc64le.rpm: Already downloaded [SKIPPED] debugedit-5.0-12.fc40.ppc64le.rpm: Already downloaded [SKIPPED] diffutils-3.10-3.fc39.ppc64le.rpm: Already downloaded [SKIPPED] dwz-0.15-3.fc39.ppc64le.rpm: Already downloaded [SKIPPED] ed-1.19-4.fc39.ppc64le.rpm: Already downloaded [SKIPPED] efi-srpm-macros-5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] elfutils-0.190-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] elfutils-debuginfod-client-0.190-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] elfutils-default-yama-scope-0.190-4.fc40.noarch.rpm: Already downloaded [SKIPPED] elfutils-libelf-0.190-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] elfutils-libs-0.190-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] fedora-gpg-keys-40-0.2.noarch.rpm: Already downloaded [SKIPPED] fedora-release-40-0.20.noarch.rpm: Already 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krb5-libs-1.21.2-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libacl-2.3.1-11.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libarchive-3.7.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libattr-2.5.1-9.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libblkid-2.39.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libbrotli-1.1.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libcap-2.69-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libcap-ng-0.8.3-8.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libcom_err-1.47.0-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libcurl-8.5.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libeconf-0.5.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libevent-2.1.12-9.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libfdisk-2.39.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libffi-3.4.4-4.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libgcc-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libgomp-13.2.1-6.fc40.ppc64le.rpm: 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ncurses-libs-6.4-8.20231001.fc40.ppc64le.rpm: Already downloaded [SKIPPED] ocaml-srpm-macros-9-1.fc40.noarch.rpm: Already downloaded [SKIPPED] openblas-srpm-macros-2-14.fc39.noarch.rpm: Already downloaded [SKIPPED] openldap-2.6.6-1.fc39.ppc64le.rpm: Already downloaded [SKIPPED] openssl-libs-3.1.4-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] p11-kit-0.25.3-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] p11-kit-trust-0.25.3-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] package-notes-srpm-macros-0.5-9.fc39.noarch.rpm: Already downloaded [SKIPPED] pam-1.5.3-8.fc40.ppc64le.rpm: Already downloaded [SKIPPED] pam-libs-1.5.3-8.fc40.ppc64le.rpm: Already downloaded [SKIPPED] patch-2.7.6-22.fc39.ppc64le.rpm: Already downloaded [SKIPPED] pcre2-10.42-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] pcre2-syntax-10.42-2.fc40.noarch.rpm: Already downloaded [SKIPPED] perl-srpm-macros-1-51.fc39.noarch.rpm: Already downloaded [SKIPPED] pkgconf-1.9.5-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] pkgconf-m4-1.9.5-2.fc39.noarch.rpm: Already downloaded [SKIPPED] pkgconf-pkg-config-1.9.5-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] popt-1.19-3.fc39.ppc64le.rpm: Already downloaded [SKIPPED] publicsuffix-list-dafsa-20230812-1.fc40.noarch.rpm: Already downloaded [SKIPPED] pyproject-srpm-macros-1.10.0-1.fc40.noarch.rpm: Already downloaded [SKIPPED] python-srpm-macros-3.12-5.fc40.noarch.rpm: Already downloaded [SKIPPED] qt5-srpm-macros-5.15.11-1.fc40.noarch.rpm: Already downloaded [SKIPPED] qt6-srpm-macros-6.6.1-1.fc40.noarch.rpm: Already downloaded [SKIPPED] readline-8.2-4.fc39.ppc64le.rpm: Already downloaded [SKIPPED] redhat-rpm-config-271-1.fc40.noarch.rpm: Already downloaded [SKIPPED] rpm-4.19.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] rpm-build-4.19.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] rpm-build-libs-4.19.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] rpm-libs-4.19.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] rpm-sequoia-1.5.0-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] rust-srpm-macros-25.2-2.fc40.noarch.rpm: Already downloaded [SKIPPED] sed-4.8-14.fc39.ppc64le.rpm: Already downloaded [SKIPPED] setup-2.14.5-1.fc40.noarch.rpm: Already downloaded [SKIPPED] shadow-utils-4.14.0-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] sqlite-libs-3.44.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] systemd-libs-255-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] tar-1.35-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] unzip-6.0-62.fc39.ppc64le.rpm: Already downloaded [SKIPPED] util-linux-2.39.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] util-linux-core-2.39.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] which-2.21-40.fc39.ppc64le.rpm: Already downloaded [SKIPPED] xxhash-libs-0.8.2-1.fc39.ppc64le.rpm: Already downloaded [SKIPPED] xz-5.4.5-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] xz-libs-5.4.5-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] zip-3.0-39.fc40.ppc64le.rpm: Already downloaded [SKIPPED] zlib-1.2.13-5.fc40.ppc64le.rpm: Already downloaded [SKIPPED] zstd-1.5.5-4.fc39.ppc64le.rpm: Already downloaded fedora 1.6 MB/s | 1.6 kB 00:00 Importing GPG key 0xA15B79CC: Userid : "Fedora (40) " Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary Key imported successfully fedora 1.6 MB/s | 1.6 kB 00:00 GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed fedora 1.6 MB/s | 1.6 kB 00:00 Key imported successfully Importing GPG key 0x18B8E74C: Userid : "Fedora (39) " Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C From : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.ppc64le 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-6.fc40.ppc64le 1/153 Running scriptlet: libgcc-13.2.1-6.fc40.ppc64le 1/153 Installing : crypto-policies-20231204-1.git1e3a2e4.fc40.noarc 2/153 Running scriptlet: crypto-policies-20231204-1.git1e3a2e4.fc40.noarc 2/153 Installing : fedora-release-identity-basic-40-0.20.noarch 3/153 Installing : fedora-repos-rawhide-40-0.2.noarch 4/153 Installing : fedora-gpg-keys-40-0.2.noarch 5/153 Installing : fedora-repos-40-0.2.noarch 6/153 Installing : fedora-release-common-40-0.20.noarch 7/153 Installing : fedora-release-40-0.20.noarch 8/153 Installing : setup-2.14.5-1.fc40.noarch 9/153 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.5-1.fc40.noarch 9/153 Installing : filesystem-3.18-6.fc39.ppc64le 10/153 Installing : basesystem-11-18.fc39.noarch 11/153 Installing : rust-srpm-macros-25.2-2.fc40.noarch 12/153 Installing : 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pcre2-10.42-2.fc40.ppc64le 65/153 Installing : libselinux-3.6-0.rc2.1.fc40.ppc64le 66/153 Installing : sed-4.8-14.fc39.ppc64le 67/153 Installing : grep-3.11-5.fc40.ppc64le 68/153 Installing : findutils-1:4.9.0-6.fc40.ppc64le 69/153 Installing : xz-5.4.5-1.fc40.ppc64le 70/153 Installing : libmount-2.39.2-1.fc40.ppc64le 71/153 Installing : util-linux-core-2.39.2-1.fc40.ppc64le 72/153 Installing : libsemanage-3.6-0.rc2.1.fc40.ppc64le 73/153 Installing : shadow-utils-2:4.14.0-2.fc40.ppc64le 74/153 Running scriptlet: libutempter-1.2.1-10.fc39.ppc64le 75/153 Installing : libutempter-1.2.1-10.fc39.ppc64le 75/153 Installing : tar-2:1.35-2.fc40.ppc64le 76/153 Installing : libpsl-0.21.2-4.fc39.ppc64le 77/153 Installing : zip-3.0-39.fc40.ppc64le 78/153 Installing : zstd-1.5.5-4.fc39.ppc64le 79/153 Installing : cyrus-sasl-lib-2.1.28-11.fc39.ppc64le 80/153 Installing : gdbm-1:1.23-4.fc39.ppc64le 81/153 Installing : libfdisk-2.39.2-1.fc40.ppc64le 82/153 Installing : bzip2-1.0.8-16.fc39.ppc64le 83/153 Installing : libxml2-2.12.2-2.fc40.ppc64le 84/153 Installing : sqlite-libs-3.44.2-1.fc40.ppc64le 85/153 Installing : ed-1.19-4.fc39.ppc64le 86/153 Installing : patch-2.7.6-22.fc39.ppc64le 87/153 Installing : elfutils-default-yama-scope-0.190-4.fc40.noarch 88/153 Running scriptlet: elfutils-default-yama-scope-0.190-4.fc40.noarch 88/153 Installing : cpio-2.14-5.fc40.ppc64le 89/153 Installing : diffutils-3.10-3.fc39.ppc64le 90/153 Installing : keyutils-libs-1.6.1-7.fc39.ppc64le 91/153 Installing : libbrotli-1.1.0-1.fc40.ppc64le 92/153 Installing : libffi-3.4.4-4.fc39.ppc64le 93/153 Installing : p11-kit-0.25.3-1.fc40.ppc64le 94/153 Installing : p11-kit-trust-0.25.3-1.fc40.ppc64le 95/153 Running scriptlet: p11-kit-trust-0.25.3-1.fc40.ppc64le 95/153 Installing : libgomp-13.2.1-6.fc40.ppc64le 96/153 Installing : libnghttp2-1.58.0-1.fc40.ppc64le 97/153 Installing : libpkgconf-1.9.5-2.fc39.ppc64le 98/153 Installing : pkgconf-1.9.5-2.fc39.ppc64le 99/153 Installing : pkgconf-pkg-config-1.9.5-2.fc39.ppc64le 100/153 Installing : librtas-2.0.4-3.fc39.ppc64le 101/153 Running scriptlet: librtas-2.0.4-3.fc39.ppc64le 101/153 Installing : libsigsegv-2.14-5.fc39.ppc64le 102/153 Installing : gawk-5.2.2-2.fc39.ppc64le 103/153 Installing : libverto-0.3.2-6.fc39.ppc64le 104/153 Installing : xxhash-libs-0.8.2-1.fc39.ppc64le 105/153 Installing : libssh-config-0.10.5-2.fc39.noarch 106/153 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 107/153 Installing : gnat-srpm-macros-6-3.fc39.noarch 108/153 Installing : ghc-srpm-macros-1.6.1-3.fc40.noarch 109/153 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 110/153 Installing : coreutils-common-9.4-1.fc40.ppc64le 111/153 Installing : openssl-libs-1:3.1.4-1.fc40.ppc64le 112/153 Installing : coreutils-9.4-1.fc40.ppc64le 113/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 114/153 Installing : ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 114/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 114/153 Installing : krb5-libs-1.21.2-2.fc40.ppc64le 115/153 Installing : libtirpc-1.3.4-0.fc40.ppc64le 116/153 Running scriptlet: authselect-libs-1.4.3-1.fc40.ppc64le 117/153 Installing : authselect-libs-1.4.3-1.fc40.ppc64le 117/153 Installing : gzip-1.12-6.fc39.ppc64le 118/153 Installing : cracklib-2.9.11-2.fc39.ppc64le 119/153 Installing : libpwquality-1.4.5-6.fc39.ppc64le 120/153 Installing : authselect-1.4.3-1.fc40.ppc64le 121/153 Installing : libnsl2-2.0.0-6.fc39.ppc64le 122/153 Installing : pam-1.5.3-8.fc40.ppc64le 123/153 Installing : libssh-0.10.5-2.fc39.ppc64le 124/153 Installing : libarchive-3.7.2-1.fc40.ppc64le 125/153 Installing : libevent-2.1.12-9.fc39.ppc64le 126/153 Installing : openldap-2.6.6-1.fc39.ppc64le 127/153 Installing : libcurl-8.5.0-1.fc40.ppc64le 128/153 Installing : elfutils-libs-0.190-4.fc40.ppc64le 129/153 Installing : elfutils-debuginfod-client-0.190-4.fc40.ppc64le 130/153 Installing : binutils-gold-2.41-16.fc40.ppc64le 131/153 Running scriptlet: binutils-gold-2.41-16.fc40.ppc64le 131/153 Installing : binutils-2.41-16.fc40.ppc64le 132/153 Running scriptlet: binutils-2.41-16.fc40.ppc64le 132/153 Installing : elfutils-0.190-4.fc40.ppc64le 133/153 Installing : gdb-minimal-14.1-1.fc40.ppc64le 134/153 Installing : debugedit-5.0-12.fc40.ppc64le 135/153 Installing : curl-8.5.0-1.fc40.ppc64le 136/153 Installing : rpm-sequoia-1.5.0-2.fc40.ppc64le 137/153 Installing : rpm-libs-4.19.0-3.fc40.ppc64le 138/153 Running scriptlet: rpm-4.19.0-3.fc40.ppc64le 139/153 Installing : rpm-4.19.0-3.fc40.ppc64le 139/153 Installing : efi-srpm-macros-5-9.fc39.noarch 140/153 Installing : lua-srpm-macros-1-9.fc39.noarch 141/153 Installing : rpm-build-libs-4.19.0-3.fc40.ppc64le 142/153 Installing : ansible-srpm-macros-1-11.fc39.noarch 143/153 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 144/153 Installing : forge-srpm-macros-0.2.0-1.fc40.noarch 145/153 Installing : go-srpm-macros-3.3.1-1.fc40.noarch 146/153 Installing : python-srpm-macros-3.12-5.fc40.noarch 147/153 Installing : redhat-rpm-config-271-1.fc40.noarch 148/153 Installing : rpm-build-4.19.0-3.fc40.ppc64le 149/153 Installing : pyproject-srpm-macros-1.10.0-1.fc40.noarch 150/153 Installing : util-linux-2.39.2-1.fc40.ppc64le 151/153 Installing : which-2.21-40.fc39.ppc64le 152/153 Installing : info-7.1-1.fc40.ppc64le 153/153 Running scriptlet: filesystem-3.18-6.fc39.ppc64le 153/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 153/153 Running scriptlet: authselect-libs-1.4.3-1.fc40.ppc64le 153/153 Running scriptlet: rpm-4.19.0-3.fc40.ppc64le 153/153 Running scriptlet: info-7.1-1.fc40.ppc64le 153/153 Installed: alternatives-1.25-1.fc39.ppc64le ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc40.ppc64le authselect-1.4.3-1.fc40.ppc64le authselect-libs-1.4.3-1.fc40.ppc64le basesystem-11-18.fc39.noarch bash-5.2.21-2.fc40.ppc64le binutils-2.41-16.fc40.ppc64le binutils-gold-2.41-16.fc40.ppc64le bzip2-1.0.8-16.fc39.ppc64le bzip2-libs-1.0.8-16.fc39.ppc64le ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.ppc64le coreutils-common-9.4-1.fc40.ppc64le cpio-2.14-5.fc40.ppc64le cracklib-2.9.11-2.fc39.ppc64le crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.ppc64le cyrus-sasl-lib-2.1.28-11.fc39.ppc64le debugedit-5.0-12.fc40.ppc64le diffutils-3.10-3.fc39.ppc64le dwz-0.15-3.fc39.ppc64le ed-1.19-4.fc39.ppc64le efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.ppc64le elfutils-debuginfod-client-0.190-4.fc40.ppc64le elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.ppc64le elfutils-libs-0.190-4.fc40.ppc64le fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.20.noarch fedora-release-common-40-0.20.noarch fedora-release-identity-basic-40-0.20.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.ppc64le file-libs-5.45-1.fc40.ppc64le filesystem-3.18-6.fc39.ppc64le findutils-1:4.9.0-6.fc40.ppc64le fonts-srpm-macros-1:2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.ppc64le gdb-minimal-14.1-1.fc40.ppc64le gdbm-1:1.23-4.fc39.ppc64le gdbm-libs-1:1.23-4.fc39.ppc64le ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-26.fc40.ppc64le glibc-common-2.38.9000-26.fc40.ppc64le glibc-gconv-extra-2.38.9000-26.fc40.ppc64le glibc-minimal-langpack-2.38.9000-26.fc40.ppc64le gmp-1:6.2.1-5.fc39.ppc64le gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.ppc64le gzip-1.12-6.fc39.ppc64le info-7.1-1.fc40.ppc64le jansson-2.13.1-7.fc39.ppc64le kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.ppc64le krb5-libs-1.21.2-2.fc40.ppc64le libacl-2.3.1-11.fc40.ppc64le libarchive-3.7.2-1.fc40.ppc64le libattr-2.5.1-9.fc40.ppc64le libblkid-2.39.2-1.fc40.ppc64le libbrotli-1.1.0-1.fc40.ppc64le libcap-2.69-1.fc40.ppc64le libcap-ng-0.8.3-8.fc40.ppc64le libcom_err-1.47.0-2.fc39.ppc64le libcurl-8.5.0-1.fc40.ppc64le libeconf-0.5.2-1.fc40.ppc64le libevent-2.1.12-9.fc39.ppc64le libfdisk-2.39.2-1.fc40.ppc64le libffi-3.4.4-4.fc39.ppc64le libgcc-13.2.1-6.fc40.ppc64le libgomp-13.2.1-6.fc40.ppc64le libidn2-2.3.4-3.fc39.ppc64le libmount-2.39.2-1.fc40.ppc64le libnghttp2-1.58.0-1.fc40.ppc64le libnsl2-2.0.0-6.fc39.ppc64le libpkgconf-1.9.5-2.fc39.ppc64le libpsl-0.21.2-4.fc39.ppc64le libpwquality-1.4.5-6.fc39.ppc64le librtas-2.0.4-3.fc39.ppc64le libselinux-3.6-0.rc2.1.fc40.ppc64le libsemanage-3.6-0.rc2.1.fc40.ppc64le libsepol-3.6-0.rc2.1.fc40.ppc64le libsigsegv-2.14-5.fc39.ppc64le libsmartcols-2.39.2-1.fc40.ppc64le libssh-0.10.5-2.fc39.ppc64le libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-6.fc40.ppc64le libtasn1-4.19.0-3.fc39.ppc64le libtirpc-1.3.4-0.fc40.ppc64le libunistring-1.1-5.fc40.ppc64le libutempter-1.2.1-10.fc39.ppc64le libuuid-2.39.2-1.fc40.ppc64le libverto-0.3.2-6.fc39.ppc64le libxcrypt-4.4.36-2.fc39.ppc64le libxml2-2.12.2-2.fc40.ppc64le libzstd-1.5.5-4.fc39.ppc64le lua-libs-5.4.6-3.fc39.ppc64le lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.ppc64le mpfr-4.2.1-1.fc40.ppc64le ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.ppc64le ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.ppc64le openssl-libs-1:3.1.4-1.fc40.ppc64le p11-kit-0.25.3-1.fc40.ppc64le p11-kit-trust-0.25.3-1.fc40.ppc64le package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-8.fc40.ppc64le pam-libs-1.5.3-8.fc40.ppc64le patch-2.7.6-22.fc39.ppc64le pcre2-10.42-2.fc40.ppc64le pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.ppc64le pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.ppc64le popt-1.19-3.fc39.ppc64le publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.10.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.11-1.fc40.noarch qt6-srpm-macros-6.6.1-1.fc40.noarch readline-8.2-4.fc39.ppc64le redhat-rpm-config-271-1.fc40.noarch rpm-4.19.0-3.fc40.ppc64le rpm-build-4.19.0-3.fc40.ppc64le rpm-build-libs-4.19.0-3.fc40.ppc64le rpm-libs-4.19.0-3.fc40.ppc64le rpm-sequoia-1.5.0-2.fc40.ppc64le rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.ppc64le setup-2.14.5-1.fc40.noarch shadow-utils-2:4.14.0-2.fc40.ppc64le sqlite-libs-3.44.2-1.fc40.ppc64le systemd-libs-255-1.fc40.ppc64le tar-2:1.35-2.fc40.ppc64le unzip-6.0-62.fc39.ppc64le util-linux-2.39.2-1.fc40.ppc64le util-linux-core-2.39.2-1.fc40.ppc64le which-2.21-40.fc39.ppc64le xxhash-libs-0.8.2-1.fc39.ppc64le xz-5.4.5-1.fc40.ppc64le xz-libs-5.4.5-1.fc40.ppc64le zip-3.0-39.fc40.ppc64le zlib-1.2.13-5.fc40.ppc64le zstd-1.5.5-4.fc39.ppc64le Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.ppc64le ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc40.ppc64le authselect-1.4.3-1.fc40.ppc64le authselect-libs-1.4.3-1.fc40.ppc64le basesystem-11-18.fc39.noarch bash-5.2.21-2.fc40.ppc64le binutils-2.41-16.fc40.ppc64le binutils-gold-2.41-16.fc40.ppc64le bzip2-1.0.8-16.fc39.ppc64le bzip2-libs-1.0.8-16.fc39.ppc64le ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.ppc64le coreutils-common-9.4-1.fc40.ppc64le cpio-2.14-5.fc40.ppc64le cracklib-2.9.11-2.fc39.ppc64le crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.ppc64le cyrus-sasl-lib-2.1.28-11.fc39.ppc64le debugedit-5.0-12.fc40.ppc64le diffutils-3.10-3.fc39.ppc64le dwz-0.15-3.fc39.ppc64le ed-1.19-4.fc39.ppc64le efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.ppc64le elfutils-debuginfod-client-0.190-4.fc40.ppc64le elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.ppc64le elfutils-libs-0.190-4.fc40.ppc64le fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.20.noarch fedora-release-common-40-0.20.noarch fedora-release-identity-basic-40-0.20.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.ppc64le file-libs-5.45-1.fc40.ppc64le filesystem-3.18-6.fc39.ppc64le findutils-4.9.0-6.fc40.ppc64le fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.ppc64le gdb-minimal-14.1-1.fc40.ppc64le gdbm-1.23-4.fc39.ppc64le gdbm-libs-1.23-4.fc39.ppc64le ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-26.fc40.ppc64le glibc-common-2.38.9000-26.fc40.ppc64le glibc-gconv-extra-2.38.9000-26.fc40.ppc64le glibc-minimal-langpack-2.38.9000-26.fc40.ppc64le gmp-6.2.1-5.fc39.ppc64le gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch gpg-pubkey-18b8e74c-62f2920f gpg-pubkey-a15b79cc-63d04c2c grep-3.11-5.fc40.ppc64le gzip-1.12-6.fc39.ppc64le info-7.1-1.fc40.ppc64le jansson-2.13.1-7.fc39.ppc64le kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.1-7.fc39.ppc64le krb5-libs-1.21.2-2.fc40.ppc64le libacl-2.3.1-11.fc40.ppc64le libarchive-3.7.2-1.fc40.ppc64le libattr-2.5.1-9.fc40.ppc64le libblkid-2.39.2-1.fc40.ppc64le libbrotli-1.1.0-1.fc40.ppc64le libcap-2.69-1.fc40.ppc64le libcap-ng-0.8.3-8.fc40.ppc64le libcom_err-1.47.0-2.fc39.ppc64le libcurl-8.5.0-1.fc40.ppc64le libeconf-0.5.2-1.fc40.ppc64le libevent-2.1.12-9.fc39.ppc64le libfdisk-2.39.2-1.fc40.ppc64le libffi-3.4.4-4.fc39.ppc64le libgcc-13.2.1-6.fc40.ppc64le libgomp-13.2.1-6.fc40.ppc64le libidn2-2.3.4-3.fc39.ppc64le libmount-2.39.2-1.fc40.ppc64le libnghttp2-1.58.0-1.fc40.ppc64le libnsl2-2.0.0-6.fc39.ppc64le libpkgconf-1.9.5-2.fc39.ppc64le libpsl-0.21.2-4.fc39.ppc64le libpwquality-1.4.5-6.fc39.ppc64le librtas-2.0.4-3.fc39.ppc64le libselinux-3.6-0.rc2.1.fc40.ppc64le libsemanage-3.6-0.rc2.1.fc40.ppc64le libsepol-3.6-0.rc2.1.fc40.ppc64le libsigsegv-2.14-5.fc39.ppc64le libsmartcols-2.39.2-1.fc40.ppc64le libssh-0.10.5-2.fc39.ppc64le libssh-config-0.10.5-2.fc39.noarch libstdc++-13.2.1-6.fc40.ppc64le libtasn1-4.19.0-3.fc39.ppc64le libtirpc-1.3.4-0.fc40.ppc64le libunistring-1.1-5.fc40.ppc64le libutempter-1.2.1-10.fc39.ppc64le libuuid-2.39.2-1.fc40.ppc64le libverto-0.3.2-6.fc39.ppc64le libxcrypt-4.4.36-2.fc39.ppc64le libxml2-2.12.2-2.fc40.ppc64le libzstd-1.5.5-4.fc39.ppc64le lua-libs-5.4.6-3.fc39.ppc64le lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.ppc64le mpfr-4.2.1-1.fc40.ppc64le ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.ppc64le ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.ppc64le openssl-libs-3.1.4-1.fc40.ppc64le p11-kit-0.25.3-1.fc40.ppc64le p11-kit-trust-0.25.3-1.fc40.ppc64le package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-8.fc40.ppc64le pam-libs-1.5.3-8.fc40.ppc64le patch-2.7.6-22.fc39.ppc64le pcre2-10.42-2.fc40.ppc64le pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.ppc64le pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.ppc64le popt-1.19-3.fc39.ppc64le publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.10.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.11-1.fc40.noarch qt6-srpm-macros-6.6.1-1.fc40.noarch readline-8.2-4.fc39.ppc64le redhat-rpm-config-271-1.fc40.noarch rpm-4.19.0-3.fc40.ppc64le rpm-build-4.19.0-3.fc40.ppc64le rpm-build-libs-4.19.0-3.fc40.ppc64le rpm-libs-4.19.0-3.fc40.ppc64le rpm-sequoia-1.5.0-2.fc40.ppc64le rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.ppc64le setup-2.14.5-1.fc40.noarch shadow-utils-4.14.0-2.fc40.ppc64le sqlite-libs-3.44.2-1.fc40.ppc64le systemd-libs-255-1.fc40.ppc64le tar-1.35-2.fc40.ppc64le unzip-6.0-62.fc39.ppc64le util-linux-2.39.2-1.fc40.ppc64le util-linux-core-2.39.2-1.fc40.ppc64le which-2.21-40.fc39.ppc64le xxhash-libs-0.8.2-1.fc39.ppc64le xz-5.4.5-1.fc40.ppc64le xz-libs-5.4.5-1.fc40.ppc64le zip-3.0-39.fc40.ppc64le zlib-1.2.13-5.fc40.ppc64le zstd-1.5.5-4.fc39.ppc64le Start: buildsrpm Start: rpmbuild -bs Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1699056000 Wrote: /builddir/build/SRPMS/avogadro2-libs-1.98.1-1.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-iwhuyv99/avogadro2-libs/avogadro2-libs.spec) Config(child) 1 minutes 36 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/avogadro2-libs-1.98.1-1.fc40.src.rpm) Config(fedora-rawhide-ppc64le) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1702405450.786193/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-bootstrap-1702405450.786193/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin Finish: chroot init INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-3.fc40.ppc64le rpm-sequoia-1.5.0-2.fc40.ppc64le python3-dnf-4.18.2-1.fc40.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch yum-4.18.2-1.fc40.noarch Start: build phase for avogadro2-libs-1.98.1-1.fc40.src.rpm Start: build setup for avogadro2-libs-1.98.1-1.fc40.src.rpm Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1699056000 Wrote: /builddir/build/SRPMS/avogadro2-libs-1.98.1-1.fc40.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 12 kB/s | 1.5 kB 00:00 fedora 84 kB/s | 5.6 kB 00:00 Dependencies resolved. ============================================================================================ Package Arch Version Repo Size ============================================================================================ Installing: boost-devel ppc64le 1.83.0-0.fc40 copr_base 12 M chrpath ppc64le 0.16-21.fc39 fedora 31 k cmake ppc64le 3.27.7-1.fc40 fedora 11 M doxygen ppc64le 2:1.9.8-1.fc40 fedora 5.5 M eigen3-devel noarch 3.4.0-12.fc39 fedora 1.2 M gcc ppc64le 13.2.1-6.fc40 fedora 30 M gcc-c++ ppc64le 13.2.1-6.fc40 fedora 12 M glew-devel ppc64le 2.2.0-5.fc39 fedora 222 k graphviz ppc64le 9.0.0-3.fc40 fedora 5.1 M hdf5-devel ppc64le 1.12.1-15.fc40 fedora 1.3 M jsoncpp-devel ppc64le 1.9.5-5.fc39 fedora 29 k libarchive-devel ppc64le 3.7.2-1.fc40 fedora 134 k make ppc64le 1:4.4.1-2.fc39 fedora 604 k mesa-libGLU-devel ppc64le 9.0.3-1.fc39 fedora 12 k mmtf-cpp-devel ppc64le 1.1.0-3.fc39 fedora 30 k openbabel-devel ppc64le 3.1.1-21.fc39 fedora 207 k python3-devel ppc64le 3.12.1-1.fc40 fedora 312 k qt5-qtbase-devel ppc64le 5.15.11-7.fc40 fedora 3.7 M qt5-qtsvg-devel ppc64le 5.15.11-1.fc40 fedora 32 k qt5-qttools-devel ppc64le 5.15.11-1.fc40 fedora 231 k spglib-devel ppc64le 2.0.2-3.fc39 fedora 14 k Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-10.fc39 fedora 121 k adobe-mappings-cmap noarch 20230622-1.fc39 fedora 2.1 M adobe-mappings-cmap-deprecated noarch 20230622-1.fc39 fedora 113 k adobe-mappings-pdf noarch 20190401-5.fc39 fedora 698 k annobin-docs noarch 12.33-1.fc40 fedora 91 k annobin-plugin-gcc ppc64le 12.33-1.fc40 fedora 961 k avahi-libs ppc64le 0.8-24.fc39 fedora 72 k boost ppc64le 1.83.0-0.fc40 copr_base 14 k boost-atomic ppc64le 1.83.0-0.fc40 copr_base 20 k boost-chrono ppc64le 1.83.0-0.fc40 copr_base 26 k boost-container ppc64le 1.83.0-0.fc40 copr_base 43 k boost-context ppc64le 1.83.0-0.fc40 copr_base 17 k boost-contract ppc64le 1.83.0-0.fc40 copr_base 46 k boost-coroutine ppc64le 1.83.0-0.fc40 copr_base 21 k boost-date-time ppc64le 1.83.0-0.fc40 copr_base 16 k boost-fiber ppc64le 1.83.0-0.fc40 copr_base 44 k boost-filesystem ppc64le 1.83.0-0.fc40 copr_base 69 k boost-graph ppc64le 1.83.0-0.fc40 copr_base 159 k boost-iostreams ppc64le 1.83.0-0.fc40 copr_base 41 k boost-json ppc64le 1.83.0-0.fc40 copr_base 152 k boost-locale ppc64le 1.83.0-0.fc40 copr_base 235 k boost-log ppc64le 1.83.0-0.fc40 copr_base 521 k boost-math ppc64le 1.83.0-0.fc40 copr_base 307 k boost-nowide ppc64le 1.83.0-0.fc40 copr_base 22 k boost-numpy3 ppc64le 1.83.0-0.fc40 copr_base 30 k boost-program-options ppc64le 1.83.0-0.fc40 copr_base 117 k boost-python3 ppc64le 1.83.0-0.fc40 copr_base 118 k boost-random ppc64le 1.83.0-0.fc40 copr_base 25 k boost-regex ppc64le 1.83.0-0.fc40 copr_base 122 k boost-serialization ppc64le 1.83.0-0.fc40 copr_base 139 k boost-stacktrace ppc64le 1.83.0-0.fc40 copr_base 31 k boost-system ppc64le 1.83.0-0.fc40 copr_base 16 k boost-test ppc64le 1.83.0-0.fc40 copr_base 251 k boost-thread ppc64le 1.83.0-0.fc40 copr_base 64 k boost-timer ppc64le 1.83.0-0.fc40 copr_base 41 k boost-type_erasure ppc64le 1.83.0-0.fc40 copr_base 33 k boost-wave ppc64le 1.83.0-0.fc40 copr_base 239 k cairo ppc64le 1.18.0-1.fc40 fedora 796 k cairo-gobject ppc64le 1.18.0-1.fc40 fedora 19 k clang-libs ppc64le 17.0.6-1.fc40 fedora 24 M clang-resource-filesystem noarch 17.0.6-1.fc40 fedora 14 k cmake-data noarch 3.27.7-1.fc40 fedora 2.2 M cmake-filesystem ppc64le 3.27.7-1.fc40 fedora 19 k cmake-rpm-macros noarch 3.27.7-1.fc40 fedora 19 k cpp ppc64le 13.2.1-6.fc40 fedora 9.8 M crypto-policies-scripts noarch 20231204-1.git1e3a2e4.fc40 fedora 117 k cups-libs ppc64le 1:2.4.7-4.fc40 fedora 321 k dbus-libs ppc64le 1:1.14.10-1.fc40 fedora 177 k default-fonts-core-sans noarch 4.0-9.fc40 fedora 32 k double-conversion ppc64le 3.1.5-9.fc39 fedora 53 k duktape ppc64le 2.7.0-5.fc39 fedora 183 k emacs-filesystem noarch 1:29.1-14.fc40 fedora 7.4 k expat ppc64le 2.5.0-3.fc39 fedora 116 k flexiblas ppc64le 3.3.1-5.fc39 fedora 33 k flexiblas-netlib ppc64le 3.3.1-5.fc39 fedora 2.8 M flexiblas-openblas-openmp ppc64le 3.3.1-5.fc39 fedora 17 k fontconfig ppc64le 2.14.2-5.fc40 fedora 343 k fonts-filesystem noarch 1:2.0.5-12.fc39 fedora 8.2 k freetype ppc64le 2.13.1-2.fc39 fedora 474 k fribidi ppc64le 1.0.13-2.fc39 fedora 95 k gc ppc64le 8.2.2-4.fc39 fedora 122 k gcc-gfortran ppc64le 13.2.1-6.fc40 fedora 11 M gcc-plugin-annobin ppc64le 13.2.1-6.fc40 fedora 52 k gd ppc64le 2.3.3-12.fc39 fedora 157 k gdk-pixbuf2 ppc64le 2.42.10-5.fc39 fedora 493 k gl-manpages noarch 1.1-29.20190306.fc40 fedora 1.2 M glib2 ppc64le 2.78.3-1.fc40 fedora 2.9 M glibc-devel ppc64le 2.38.9000-26.fc40 fedora 605 k glx-utils ppc64le 9.0.0-4.fc40 fedora 74 k gnutls ppc64le 3.8.2-2.fc40 fedora 1.1 M google-droid-sans-fonts noarch 20200215-17.fc40 fedora 2.7 M google-noto-fonts-common noarch 20230801-4.fc40 fedora 17 k google-noto-sans-vf-fonts noarch 20230801-4.fc40 fedora 583 k graphite2 ppc64le 1.3.14-13.fc40 fedora 105 k groff-base ppc64le 1.23.0-3.fc40 fedora 1.2 M gts ppc64le 0.7.6-46.20121130.fc39 fedora 262 k guile22 ppc64le 2.2.7-9.fc39 fedora 6.6 M harfbuzz ppc64le 8.3.0-2.fc40 fedora 1.0 M hdf5 ppc64le 1.12.1-15.fc40 fedora 2.3 M highway ppc64le 1.0.7-1.fc40 fedora 276 k inchi-libs ppc64le 1.0.6-7.fc39 fedora 748 k jbig2dec-libs ppc64le 0.20-1.fc40 fedora 78 k jbigkit-libs ppc64le 2.1-27.fc40 fedora 56 k jsoncpp ppc64le 1.9.5-5.fc39 fedora 99 k kernel-headers ppc64le 6.7.0-0.rc5.41.fc40 fedora 1.5 M lasi ppc64le 1.1.3-11.fc39 fedora 54 k lcms2 ppc64le 2.15-2.fc39 fedora 204 k libGLEW ppc64le 2.2.0-5.fc39 fedora 169 k libICE ppc64le 1.1.1-1.fc40 fedora 81 k libSM ppc64le 1.2.4-1.fc40 fedora 44 k libX11 ppc64le 1.8.7-1.fc40 fedora 699 k libX11-common noarch 1.8.7-1.fc40 fedora 176 k libX11-devel ppc64le 1.8.7-1.fc40 fedora 1.0 M libX11-xcb ppc64le 1.8.7-1.fc40 fedora 12 k libXau ppc64le 1.0.11-4.fc40 fedora 32 k libXau-devel ppc64le 1.0.11-4.fc40 fedora 13 k libXext ppc64le 1.3.5-4.fc40 fedora 41 k libXfixes ppc64le 6.0.1-1.fc40 fedora 19 k libXft ppc64le 2.3.8-4.fc40 fedora 78 k libXpm ppc64le 3.5.17-1.fc40 fedora 71 k libXrender ppc64le 0.9.11-4.fc40 fedora 29 k libXt ppc64le 1.3.0-1.fc40 fedora 197 k libXxf86vm ppc64le 1.1.5-4.fc40 fedora 18 k libaec ppc64le 1.0.6-5.fc39 fedora 45 k libaec-devel ppc64le 1.0.6-5.fc39 fedora 12 k libaom ppc64le 3.7.1-1.fc40 fedora 1.3 M libasan ppc64le 13.2.1-6.fc40 fedora 496 k libatomic ppc64le 13.2.1-6.fc40 fedora 38 k libavif ppc64le 0.11.1-11.fc39 fedora 96 k libb2 ppc64le 0.98.1-9.fc39 fedora 25 k libdatrie ppc64le 0.2.13-7.fc39 fedora 34 k libdav1d ppc64le 1.2.1-2.fc39 fedora 315 k libdrm ppc64le 2.4.117-1.fc40 fedora 110 k libedit ppc64le 3.1-48.20230828cvs.fc40 fedora 121 k libevdev ppc64le 1.13.1-2.fc39 fedora 44 k libgfortran ppc64le 13.2.1-6.fc40 fedora 611 k libglvnd ppc64le 1:1.7.0-1.fc40 fedora 131 k libglvnd-core-devel ppc64le 1:1.7.0-1.fc40 fedora 17 k libglvnd-devel ppc64le 1:1.7.0-1.fc40 fedora 162 k libglvnd-egl ppc64le 1:1.7.0-1.fc40 fedora 41 k libglvnd-gles ppc64le 1:1.7.0-1.fc40 fedora 32 k libglvnd-glx ppc64le 1:1.7.0-1.fc40 fedora 148 k libglvnd-opengl ppc64le 1:1.7.0-1.fc40 fedora 45 k libgs ppc64le 10.02.1-4.fc40 fedora 3.7 M libgudev ppc64le 238-2.fc39 fedora 34 k libicu ppc64le 73.2-2.fc39 fedora 11 M libicu-devel ppc64le 73.2-2.fc39 fedora 925 k libijs ppc64le 0.35-19.fc39 fedora 30 k libimagequant ppc64le 4.0.3-2.fc40 fedora 392 k libinput ppc64le 1.24.0-1.fc40 fedora 230 k libjpeg-turbo ppc64le 2.1.4-3.fc39 fedora 209 k libjxl ppc64le 1:0.8.2-3.fc40 fedora 1.1 M liblerc ppc64le 4.0.0-4.fc39 fedora 220 k libmpc ppc64le 1.3.1-3.fc39 fedora 95 k libpaper ppc64le 1:2.1.1-1.fc39 fedora 27 k libpng ppc64le 2:1.6.40-1.fc40 fedora 137 k libproxy ppc64le 0.5.3-3.fc40 fedora 50 k libquadmath ppc64le 13.2.1-6.fc40 fedora 214 k libquadmath-devel ppc64le 13.2.1-6.fc40 fedora 39 k librsvg2 ppc64le 2.57.0-3.fc40 fedora 1.8 M libstdc++-devel ppc64le 13.2.1-6.fc40 fedora 2.6 M libthai ppc64le 0.1.29-6.fc39 fedora 215 k libtiff ppc64le 4.5.0-3.fc40 fedora 343 k libtool-ltdl ppc64le 2.4.7-8.fc40 fedora 40 k libubsan ppc64le 13.2.1-6.fc40 fedora 253 k libuv ppc64le 1:1.47.0-3.fc40 fedora 260 k libwacom ppc64le 2.9.0-1.fc40 fedora 47 k libwacom-data noarch 2.9.0-1.fc40 fedora 194 k libwayland-client ppc64le 1.22.0-2.fc39 fedora 36 k libwayland-server ppc64le 1.22.0-2.fc39 fedora 46 k libwebp ppc64le 1.3.2-2.fc40 fedora 267 k libxcb ppc64le 1.16-2.fc40 fedora 256 k libxcb-devel ppc64le 1.16-2.fc40 fedora 1.4 M libxcrypt-devel ppc64le 4.4.36-2.fc39 fedora 30 k libxkbcommon ppc64le 1.6.0-1.fc40 fedora 156 k libxkbcommon-x11 ppc64le 1.6.0-1.fc40 fedora 22 k libxshmfence ppc64le 1.3.2-1.fc40 fedora 12 k llvm-libs ppc64le 17.0.6-1.fc40 fedora 28 M mesa-libEGL ppc64le 23.3.0-1.fc40 fedora 152 k mesa-libEGL-devel ppc64le 23.3.0-1.fc40 fedora 21 k mesa-libGL ppc64le 23.3.0-1.fc40 fedora 198 k mesa-libGLU ppc64le 9.0.3-1.fc39 fedora 178 k mesa-libgbm ppc64le 23.3.0-1.fc40 fedora 51 k mesa-libglapi ppc64le 23.3.0-1.fc40 fedora 53 k mpdecimal ppc64le 2.5.1-7.fc39 fedora 104 k msgpack ppc64le 3.1.0-13.fc39 fedora 31 k msgpack-devel ppc64le 3.1.0-13.fc39 fedora 428 k mtdev ppc64le 1.1.6-6.fc39 fedora 22 k ncurses ppc64le 6.4-8.20231001.fc40 fedora 426 k netpbm ppc64le 11.02.00-3.fc40 fedora 200 k nettle ppc64le 3.9.1-2.fc39 fedora 460 k nspr ppc64le 4.35.0-16.fc40 fedora 172 k nss ppc64le 3.95.0-1.fc40 fedora 790 k nss-softokn ppc64le 3.95.0-1.fc40 fedora 440 k nss-softokn-freebl ppc64le 3.95.0-1.fc40 fedora 370 k nss-sysinit ppc64le 3.95.0-1.fc40 fedora 19 k nss-util ppc64le 3.95.0-1.fc40 fedora 97 k openbabel-libs ppc64le 3.1.1-21.fc39 fedora 3.9 M openblas ppc64le 0.3.25-1.fc40 fedora 38 k openblas-openmp ppc64le 0.3.25-1.fc40 fedora 4.6 M openjpeg2 ppc64le 2.5.0-5.fc40 fedora 203 k openssl-devel ppc64le 1:3.1.4-1.fc40 fedora 2.6 M pango ppc64le 1.51.0-1.fc40 fedora 374 k pcre2-utf16 ppc64le 10.42-2.fc40 fedora 220 k perl-AutoLoader noarch 5.74-503.fc40 fedora 21 k perl-B ppc64le 1.88-503.fc40 fedora 181 k perl-Carp noarch 1.54-500.fc39 fedora 29 k perl-Class-Struct noarch 0.68-503.fc40 fedora 22 k perl-Data-Dumper ppc64le 2.188-501.fc39 fedora 57 k perl-Digest noarch 1.20-500.fc39 fedora 25 k perl-Digest-MD5 ppc64le 2.58-501.fc40 fedora 36 k perl-DynaLoader ppc64le 1.54-503.fc40 fedora 26 k perl-Encode ppc64le 4:3.20-501.fc40 fedora 1.7 M perl-English noarch 1.11-503.fc40 fedora 14 k perl-Errno ppc64le 1.37-503.fc40 fedora 15 k perl-Exporter noarch 5.77-500.fc39 fedora 31 k perl-Fcntl ppc64le 1.15-503.fc40 fedora 21 k perl-File-Basename noarch 2.86-503.fc40 fedora 17 k perl-File-Find noarch 1.43-503.fc40 fedora 26 k perl-File-Path noarch 2.18-501.fc40 fedora 35 k perl-File-Temp noarch 1:0.231.100-501.fc40 fedora 59 k perl-File-stat noarch 1.13-503.fc40 fedora 17 k perl-FileHandle noarch 2.05-503.fc40 fedora 16 k perl-Getopt-Long noarch 1:2.57-1.fc40 fedora 63 k perl-Getopt-Std noarch 1.13-503.fc40 fedora 16 k perl-HTTP-Tiny noarch 0.088-3.fc39 fedora 56 k perl-IO ppc64le 1.52-503.fc40 fedora 83 k perl-IO-Socket-IP noarch 0.42-1.fc39 fedora 42 k perl-IO-Socket-SSL noarch 2.084-1.fc40 fedora 225 k perl-IPC-Open3 noarch 1.22-503.fc40 fedora 22 k perl-MIME-Base64 ppc64le 3.16-501.fc40 fedora 30 k perl-Mozilla-CA noarch 20230821-1.fc40 fedora 13 k perl-Net-SSLeay ppc64le 1.92-10.fc39 fedora 367 k perl-POSIX ppc64le 2.13-503.fc40 fedora 118 k perl-PathTools ppc64le 3.89-500.fc39 fedora 88 k perl-Pod-Escapes noarch 1:1.07-501.fc40 fedora 19 k perl-Pod-Perldoc noarch 3.28.01-501.fc39 fedora 86 k perl-Pod-Simple noarch 1:3.45-4.fc39 fedora 218 k perl-Pod-Usage noarch 4:2.03-500.fc39 fedora 39 k perl-Scalar-List-Utils ppc64le 5:1.63-500.fc39 fedora 75 k perl-SelectSaver noarch 1.02-503.fc40 fedora 12 k perl-Socket ppc64le 4:2.037-3.fc39 fedora 56 k perl-Storable ppc64le 1:3.32-500.fc39 fedora 103 k perl-Symbol noarch 1.09-503.fc40 fedora 14 k perl-Term-ANSIColor noarch 5.01-502.fc40 fedora 47 k perl-Term-Cap noarch 1.18-500.fc39 fedora 22 k perl-Text-ParseWords noarch 3.31-500.fc39 fedora 16 k perl-Text-Tabs+Wrap noarch 2023.0511-3.fc39 fedora 22 k perl-Time-Local noarch 2:1.350-3.fc39 fedora 34 k perl-URI noarch 5.21-1.fc40 fedora 125 k perl-base noarch 2.27-503.fc40 fedora 16 k perl-constant noarch 1.33-501.fc39 fedora 22 k perl-if noarch 0.61.000-503.fc40 fedora 14 k perl-interpreter ppc64le 4:5.38.2-503.fc40 fedora 72 k perl-libnet noarch 3.15-501.fc39 fedora 129 k perl-libs ppc64le 4:5.38.2-503.fc40 fedora 2.4 M perl-locale noarch 1.10-503.fc40 fedora 14 k perl-mro ppc64le 1.28-503.fc40 fedora 29 k perl-overload noarch 1.37-503.fc40 fedora 46 k perl-overloading noarch 0.02-503.fc40 fedora 13 k perl-parent noarch 1:0.241-500.fc39 fedora 14 k perl-podlators noarch 1:5.01-500.fc39 fedora 125 k perl-vars noarch 1.05-503.fc40 fedora 13 k pixman ppc64le 0.42.2-2.fc39 fedora 230 k poppler ppc64le 23.08.0-1.fc39 fedora 1.3 M poppler-data noarch 0.4.11-5.fc39 fedora 2.0 M poppler-glib ppc64le 23.08.0-1.fc39 fedora 194 k pyproject-rpm-macros noarch 1.10.0-1.fc40 fedora 41 k python-pip-wheel noarch 23.2.1-1.fc39 fedora 1.5 M python-rpm-macros noarch 3.12-5.fc40 fedora 19 k python3 ppc64le 3.12.1-1.fc40 fedora 27 k python3-libs ppc64le 3.12.1-1.fc40 fedora 9.4 M python3-numpy ppc64le 1:1.26.0-2.fc40 fedora 7.1 M python3-packaging noarch 23.2-2.fc40 fedora 125 k python3-rpm-generators noarch 14-8.fc40 fedora 30 k python3-rpm-macros noarch 3.12-5.fc40 fedora 14 k qt-settings noarch 39.0-2.fc40 fedora 9.5 k qt5-designer ppc64le 5.15.11-1.fc40 fedora 174 k qt5-doctools ppc64le 5.15.11-1.fc40 fedora 746 k qt5-linguist ppc64le 5.15.11-1.fc40 fedora 939 k qt5-qtbase ppc64le 5.15.11-7.fc40 fedora 3.8 M qt5-qtbase-common noarch 5.15.11-7.fc40 fedora 12 k qt5-qtbase-gui ppc64le 5.15.11-7.fc40 fedora 7.0 M qt5-qtdeclarative ppc64le 5.15.11-2.fc40 fedora 4.6 M qt5-qtsvg ppc64le 5.15.11-1.fc40 fedora 198 k qt5-qttools ppc64le 5.15.11-1.fc40 fedora 42 k qt5-qttools-common noarch 5.15.11-1.fc40 fedora 11 k qt5-qttools-libs-designer ppc64le 5.15.11-1.fc40 fedora 2.8 M qt5-qttools-libs-designercomponents ppc64le 5.15.11-1.fc40 fedora 841 k qt5-qttools-libs-help ppc64le 5.15.11-1.fc40 fedora 172 k qt5-rpm-macros noarch 5.15.11-1.fc40 fedora 10 k rav1e-libs ppc64le 0.6.6-4.fc40 fedora 811 k rhash ppc64le 1.4.3-3.fc39 fedora 206 k rsvg-pixbuf-loader ppc64le 2.57.0-3.fc40 fedora 16 k shared-mime-info ppc64le 2.3-2.fc40 fedora 394 k spglib ppc64le 2.0.2-3.fc39 fedora 220 k svt-av1-libs ppc64le 1.4.1-3.fc39 fedora 1.1 M tzdata noarch 2023c-4.fc40 fedora 717 k urw-base35-bookman-fonts noarch 20200910-18.fc39 fedora 847 k urw-base35-c059-fonts noarch 20200910-18.fc39 fedora 874 k urw-base35-d050000l-fonts noarch 20200910-18.fc39 fedora 76 k urw-base35-fonts noarch 20200910-18.fc39 fedora 10 k urw-base35-fonts-common noarch 20200910-18.fc39 fedora 21 k urw-base35-gothic-fonts noarch 20200910-18.fc39 fedora 643 k urw-base35-nimbus-mono-ps-fonts noarch 20200910-18.fc39 fedora 795 k urw-base35-nimbus-roman-fonts noarch 20200910-18.fc39 fedora 856 k urw-base35-nimbus-sans-fonts noarch 20200910-18.fc39 fedora 1.3 M urw-base35-p052-fonts noarch 20200910-18.fc39 fedora 974 k urw-base35-standard-symbols-ps-fonts noarch 20200910-18.fc39 fedora 42 k urw-base35-z003-fonts noarch 20200910-18.fc39 fedora 276 k vim-filesystem noarch 2:9.0.2153-1.fc40 fedora 18 k vulkan-headers noarch 1.3.268.0-1.fc40 fedora 1.2 M vulkan-loader ppc64le 1.3.268.0-1.fc40 fedora 183 k vulkan-loader-devel ppc64le 1.3.268.0-1.fc40 fedora 11 k xapian-core-libs ppc64le 1.4.23-1.fc39 fedora 783 k xcb-util ppc64le 0.4.1-3.fc39 fedora 19 k xcb-util-image ppc64le 0.4.1-3.fc39 fedora 20 k xcb-util-keysyms ppc64le 0.4.1-3.fc39 fedora 15 k xcb-util-renderutil ppc64le 0.3.10-3.fc39 fedora 18 k xcb-util-wm ppc64le 0.4.2-3.fc39 fedora 32 k xkeyboard-config noarch 2.40-2.fc40 fedora 972 k xml-common noarch 0.6.3-62.fc40 fedora 31 k xorg-x11-proto-devel noarch 2023.2-3.fc40 fedora 298 k zlib-devel ppc64le 1.2.13-5.fc40 fedora 44 k Transaction Summary ============================================================================================ Install 325 Packages Total size: 308 M Total download size: 112 M Installed size: 1.4 G Downloading Packages: [SKIPPED] boost-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-atomic-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-chrono-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-container-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-context-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-contract-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-coroutine-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-date-time-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-devel-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-fiber-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-filesystem-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-graph-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-iostreams-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-json-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-locale-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-log-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-math-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-nowide-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-numpy3-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-program-options-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-python3-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-random-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-regex-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-serialization-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-stacktrace-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-system-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-test-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-thread-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-timer-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-type_erasure-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] boost-wave-1.83.0-0.fc40.ppc64le.rpm: Already downloaded [SKIPPED] abattis-cantarell-vf-fonts-0.301-10.fc39.noarch.rpm: Already downloaded [SKIPPED] annobin-docs-12.33-1.fc40.noarch.rpm: Already downloaded [SKIPPED] annobin-plugin-gcc-12.33-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] avahi-libs-0.8-24.fc39.ppc64le.rpm: Already downloaded [SKIPPED] cairo-1.18.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cairo-gobject-1.18.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cmake-3.27.7-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cmake-data-3.27.7-1.fc40.noarch.rpm: Already downloaded [SKIPPED] cmake-filesystem-3.27.7-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cmake-rpm-macros-3.27.7-1.fc40.noarch.rpm: Already downloaded [SKIPPED] cpp-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] cups-libs-2.4.7-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] dbus-libs-1.14.10-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] default-fonts-core-sans-4.0-9.fc40.noarch.rpm: Already downloaded [SKIPPED] emacs-filesystem-29.1-14.fc40.noarch.rpm: Already downloaded [SKIPPED] expat-2.5.0-3.fc39.ppc64le.rpm: Already downloaded [SKIPPED] flexiblas-3.3.1-5.fc39.ppc64le.rpm: Already downloaded [SKIPPED] flexiblas-netlib-3.3.1-5.fc39.ppc64le.rpm: Already downloaded [SKIPPED] flexiblas-openblas-openmp-3.3.1-5.fc39.ppc64le.rpm: Already downloaded [SKIPPED] fontconfig-2.14.2-5.fc40.ppc64le.rpm: Already downloaded [SKIPPED] fonts-filesystem-2.0.5-12.fc39.noarch.rpm: Already downloaded [SKIPPED] freetype-2.13.1-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] fribidi-1.0.13-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] gc-8.2.2-4.fc39.ppc64le.rpm: Already downloaded [SKIPPED] gcc-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] gcc-c++-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] gcc-plugin-annobin-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] gdk-pixbuf2-2.42.10-5.fc39.ppc64le.rpm: Already downloaded [SKIPPED] gl-manpages-1.1-29.20190306.fc40.noarch.rpm: Already downloaded [SKIPPED] glib2-2.78.3-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] glibc-devel-2.38.9000-26.fc40.ppc64le.rpm: Already downloaded [SKIPPED] gnutls-3.8.2-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] google-noto-fonts-common-20230801-4.fc40.noarch.rpm: Already downloaded [SKIPPED] google-noto-sans-vf-fonts-20230801-4.fc40.noarch.rpm: Already downloaded [SKIPPED] graphite2-1.3.14-13.fc40.ppc64le.rpm: Already downloaded [SKIPPED] groff-base-1.23.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] guile22-2.2.7-9.fc39.ppc64le.rpm: Already downloaded [SKIPPED] harfbuzz-8.3.0-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] highway-1.0.7-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] jbigkit-libs-2.1-27.fc40.ppc64le.rpm: Already downloaded [SKIPPED] jsoncpp-1.9.5-5.fc39.ppc64le.rpm: Already downloaded [SKIPPED] kernel-headers-6.7.0-0.rc5.41.fc40.ppc64le.rpm: Already downloaded [SKIPPED] lcms2-2.15-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libICE-1.1.1-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libSM-1.2.4-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libX11-1.8.7-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libX11-common-1.8.7-1.fc40.noarch.rpm: Already downloaded [SKIPPED] libX11-devel-1.8.7-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libX11-xcb-1.8.7-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXau-1.0.11-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXau-devel-1.0.11-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXext-1.3.5-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXfixes-6.0.1-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXft-2.3.8-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXrender-0.9.11-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libXxf86vm-1.1.5-4.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libaom-3.7.1-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libasan-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libatomic-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libavif-0.11.1-11.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libb2-0.98.1-9.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libdatrie-0.2.13-7.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libdav1d-1.2.1-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libdrm-2.4.117-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libedit-3.1-48.20230828cvs.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libevdev-1.13.1-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libgfortran-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-core-devel-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-devel-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-egl-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-gles-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-glx-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libglvnd-opengl-1.7.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libgudev-238-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libicu-73.2-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libicu-devel-73.2-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libjpeg-turbo-2.1.4-3.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libjxl-0.8.2-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] liblerc-4.0.0-4.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libmpc-1.3.1-3.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libpng-1.6.40-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libquadmath-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libstdc++-devel-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libthai-0.1.29-6.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libtiff-4.5.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libtool-ltdl-2.4.7-8.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libubsan-13.2.1-6.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libuv-1.47.0-3.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libwayland-client-1.22.0-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libwayland-server-1.22.0-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libwebp-1.3.2-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libxcb-1.16-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libxcb-devel-1.16-2.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libxcrypt-devel-4.4.36-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] libxkbcommon-1.6.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] libxshmfence-1.3.2-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] llvm-libs-17.0.6-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] make-4.4.1-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libEGL-23.3.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libEGL-devel-23.3.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libGL-23.3.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libGLU-9.0.3-1.fc39.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libGLU-devel-9.0.3-1.fc39.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libgbm-23.3.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] mesa-libglapi-23.3.0-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] mpdecimal-2.5.1-7.fc39.ppc64le.rpm: Already downloaded [SKIPPED] ncurses-6.4-8.20231001.fc40.ppc64le.rpm: Already downloaded [SKIPPED] nettle-3.9.1-2.fc39.ppc64le.rpm: Already downloaded [SKIPPED] nspr-4.35.0-16.fc40.ppc64le.rpm: Already downloaded [SKIPPED] openblas-0.3.25-1.fc40.ppc64le.rpm: Already downloaded [SKIPPED] openblas-openmp-0.3.25-1.fc40.ppc64le.rpm: Already 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urw-base35-nimbus-roman-fonts-202009 12 MB/s | 856 kB 00:00 (314/325): urw-base35-p052-fonts-20200910-18.fc 16 MB/s | 974 kB 00:00 (315/325): urw-base35-nimbus-sans-fonts-2020091 15 MB/s | 1.3 MB 00:00 (316/325): urw-base35-standard-symbols-ps-fonts 761 kB/s | 42 kB 00:00 (317/325): urw-base35-z003-fonts-20200910-18.fc 6.6 MB/s | 276 kB 00:00 (318/325): vulkan-loader-devel-1.3.268.0-1.fc40 266 kB/s | 11 kB 00:00 (319/325): xapian-core-libs-1.4.23-1.fc39.ppc64 16 MB/s | 783 kB 00:00 (320/325): vulkan-headers-1.3.268.0-1.fc40.noar 15 MB/s | 1.2 MB 00:00 (321/325): xcb-util-0.4.1-3.fc39.ppc64le.rpm 527 kB/s | 19 kB 00:00 (322/325): xcb-util-image-0.4.1-3.fc39.ppc64le. 514 kB/s | 20 kB 00:00 (323/325): xcb-util-keysyms-0.4.1-3.fc39.ppc64l 498 kB/s | 15 kB 00:00 (324/325): xcb-util-renderutil-0.3.10-3.fc39.pp 607 kB/s | 18 kB 00:00 (325/325): xcb-util-wm-0.4.2-3.fc39.ppc64le.rpm 1.0 MB/s | 32 kB 00:00 -------------------------------------------------------------------------------- Total 27 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Running transaction test Transaction test succeeded. 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perl-libs-4:5.38.2-503.fc40.ppc64le perl-locale-1.10-503.fc40.noarch perl-mro-1.28-503.fc40.ppc64le perl-overload-1.37-503.fc40.noarch perl-overloading-0.02-503.fc40.noarch perl-parent-1:0.241-500.fc39.noarch perl-podlators-1:5.01-500.fc39.noarch perl-vars-1.05-503.fc40.noarch pixman-0.42.2-2.fc39.ppc64le poppler-23.08.0-1.fc39.ppc64le poppler-data-0.4.11-5.fc39.noarch poppler-glib-23.08.0-1.fc39.ppc64le pyproject-rpm-macros-1.10.0-1.fc40.noarch python-pip-wheel-23.2.1-1.fc39.noarch python-rpm-macros-3.12-5.fc40.noarch python3-3.12.1-1.fc40.ppc64le python3-devel-3.12.1-1.fc40.ppc64le python3-libs-3.12.1-1.fc40.ppc64le python3-numpy-1:1.26.0-2.fc40.ppc64le python3-packaging-23.2-2.fc40.noarch python3-rpm-generators-14-8.fc40.noarch python3-rpm-macros-3.12-5.fc40.noarch qt-settings-39.0-2.fc40.noarch qt5-designer-5.15.11-1.fc40.ppc64le qt5-doctools-5.15.11-1.fc40.ppc64le qt5-linguist-5.15.11-1.fc40.ppc64le qt5-qtbase-5.15.11-7.fc40.ppc64le qt5-qtbase-common-5.15.11-7.fc40.noarch qt5-qtbase-devel-5.15.11-7.fc40.ppc64le qt5-qtbase-gui-5.15.11-7.fc40.ppc64le qt5-qtdeclarative-5.15.11-2.fc40.ppc64le qt5-qtsvg-5.15.11-1.fc40.ppc64le qt5-qtsvg-devel-5.15.11-1.fc40.ppc64le qt5-qttools-5.15.11-1.fc40.ppc64le qt5-qttools-common-5.15.11-1.fc40.noarch qt5-qttools-devel-5.15.11-1.fc40.ppc64le qt5-qttools-libs-designer-5.15.11-1.fc40.ppc64le qt5-qttools-libs-designercomponents-5.15.11-1.fc40.ppc64le qt5-qttools-libs-help-5.15.11-1.fc40.ppc64le qt5-rpm-macros-5.15.11-1.fc40.noarch rav1e-libs-0.6.6-4.fc40.ppc64le rhash-1.4.3-3.fc39.ppc64le rsvg-pixbuf-loader-2.57.0-3.fc40.ppc64le shared-mime-info-2.3-2.fc40.ppc64le spglib-2.0.2-3.fc39.ppc64le spglib-devel-2.0.2-3.fc39.ppc64le svt-av1-libs-1.4.1-3.fc39.ppc64le tzdata-2023c-4.fc40.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch vim-filesystem-2:9.0.2153-1.fc40.noarch vulkan-headers-1.3.268.0-1.fc40.noarch vulkan-loader-1.3.268.0-1.fc40.ppc64le vulkan-loader-devel-1.3.268.0-1.fc40.ppc64le xapian-core-libs-1.4.23-1.fc39.ppc64le xcb-util-0.4.1-3.fc39.ppc64le xcb-util-image-0.4.1-3.fc39.ppc64le xcb-util-keysyms-0.4.1-3.fc39.ppc64le xcb-util-renderutil-0.3.10-3.fc39.ppc64le xcb-util-wm-0.4.2-3.fc39.ppc64le xkeyboard-config-2.40-2.fc40.noarch xml-common-0.6.3-62.fc40.noarch xorg-x11-proto-devel-2023.2-3.fc40.noarch zlib-devel-1.2.13-5.fc40.ppc64le Complete! Finish: build setup for avogadro2-libs-1.98.1-1.fc40.src.rpm Start: rpmbuild avogadro2-libs-1.98.1-1.fc40.src.rpm Building target platforms: ppc64le Building for target ppc64le setting SOURCE_DATE_EPOCH=1699056000 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.eTVzXp + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf avogadrolibs-1.98.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/avogadrolibs-1.98.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd avogadrolibs-1.98.1 + rm -rf /builddir/build/BUILD/avogadrolibs-1.98.1-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/avogadrolibs-1.98.1-SPECPARTS + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/avogenerators-1.98.0.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + tar -xf /builddir/build/SOURCES/molecules-1.98.0.tar.gz + mv molecules-1.98.0 molecules + tar -xf /builddir/build/SOURCES/crystals-1.98.0.tar.gz + mv crystals-1.98.0 crystals + mv molecules/LICENSE molecules/LICENSE-molecules + echo 'Patch #0 (avogadro2-libs-set_pythonpath.patch):' Patch #0 (avogadro2-libs-set_pythonpath.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .backup --fuzz=0 patching file avogadro/qtplugins/quantuminput/CMakeLists.txt Hunk #1 succeeded at 34 (offset -7 lines). patching file avogadro/qtplugins/scriptfileformats/CMakeLists.txt Hunk #1 succeeded at 20 (offset -4 lines). + echo 'Patch #1 (avogadro2-libs-1.94.0-do_not_download_external_files.patch):' Patch #1 (avogadro2-libs-1.94.0-do_not_download_external_files.patch): + /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .backup --fuzz=0 patching file avogadro/qtplugins/insertfragment/CMakeLists.txt Hunk #1 succeeded at 11 (offset -2 lines). + mv avogenerators-1.98.0 avogadrogenerators + mv avogadrogenerators/README.md avogadrogenerators/README-avogenerators.md + sed -e 's|../avogadrogenerators|avogadrogenerators|g' -i avogadro/qtplugins/quantuminput/CMakeLists.txt + mv thirdparty/libgwavi/README.md thirdparty/libgwavi/README-libgwavi.md + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.7HJD4H + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd avogadrolibs-1.98.1 + mkdir -p build + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DH5_USE_110_API' + export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA' + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -B build -DCMAKE_BUILD_TYPE:STRING=Release -DINSTALL_INCLUDE_DIR:PATH=include/avogadro2 -DINSTALL_LIBRARY_DIR:PATH=lib64 -Wno-dev -DENABLE_GLSL:BOOL=ON -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_VERSION:STRING=3.12 -DUSE_BOOST_PYTHON:BOOL=ON -DUSE_LIBARCHIVE:BOOL=ON -DENABLE_RPATH:BOOL=OFF -DENABLE_TESTING:BOOL=OFF -DUSE_MMTF:BOOL=ON -DUSE_QT:BOOL=ON -DUSE_MOLEQUEUE:BOOL=ON -DUSE_VTK:BOOL=OFF -DUSE_HDF5:BOOL=ON -DUSE_SPGLIB:BOOL=ON -DSPGLIB_LIBRARY:FILEPATH=/usr/lib64/libsymspg.so -DSPGLIB_INCLUDE_DIR:PATH=/usr/include/spglib -DBUILD_GPL_PLUGINS:BOOL=ON -DBUILD_STATIC_PLUGINS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=ON -DUSE_LIBMSYM:BOOL=OFF -- The C compiler identification is GNU 13.2.1 -- The CXX compiler identification is GNU 13.2.1 -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /usr/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /usr/bin/g++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE -- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success -- Could NOT find Git (missing: GIT_EXECUTABLE) -- Could not use git to determine source version, using version 1.98.1 -- Found Eigen3: /usr/include/eigen3 (found version "3.4.0") -- Found SPGLIB: /usr/include/spglib -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success -- Found Threads: TRUE -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY -- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success -- Performing Test COMPILER_HAS_DEPRECATED_ATTR -- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success -- Found HDF5: /usr/lib64/libhdf5.so (found version "1.12.1") found components: C -- Found MMTF: /usr/include -- Found OpenGL: /usr/lib64/libOpenGL.so -- Found GLEW: /usr/include (found version "2.2.0") -- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12.1", minimum required is "3") We have dalton.py;gamessuk.py;gaussian.py;molpro.py;mopac.py;nwchem.py;orca.py;psi4.py;pyscf.py;qchem.py;terachem.py We have /builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/dalton.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/gamessuk.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/gaussian.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/molpro.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/mopac.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/nwchem.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/orca.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/psi4.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/pyscf.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/qchem.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/terachem.py -- Found LibArchive: /usr/lib64/libarchive.so (found version "3.7.2") -- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot -- Configuring done (4.7s) -- Generating done (0.4s) CMake Warning: Manually-specified variables were not used by the project: CMAKE_Fortran_FLAGS_RELEASE CMAKE_INSTALL_DO_STRIP ENABLE_GLSL ENABLE_PYTHON INCLUDE_INSTALL_DIR LIB_INSTALL_DIR LIB_SUFFIX SHARE_INSTALL_PREFIX SYSCONF_INSTALL_DIR USE_BOOST_PYTHON USE_MOLEQUEUE -- Build files have been written to: /builddir/build/BUILD/avogadrolibs-1.98.1/build + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C build make: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/cmake -S/builddir/build/BUILD/avogadrolibs-1.98.1 -B/builddir/build/BUILD/avogadrolibs-1.98.1/build --check-build-system CMakeFiles/Makefile.cmake 0 make: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles /builddir/build/BUILD/avogadrolibs-1.98.1/build//CMakeFiles/progress.marks make: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f CMakeFiles/Makefile2 all /usr/bin/make -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/depend /usr/bin/make -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/CMakeFiles/pugixml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/CMakeFiles/struct.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 0%] Building C object thirdparty/CMakeFiles/struct.dir/struct/struct.c.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/gcc -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -MD -MT thirdparty/CMakeFiles/struct.dir/struct/struct.c.o -MF CMakeFiles/struct.dir/struct/struct.c.o.d -o CMakeFiles/struct.dir/struct/struct.c.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct/struct.c make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 0%] Building C object thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/gcc -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -MD -MT thirdparty/CMakeFiles/struct.dir/struct/struct_endian.c.o -MF CMakeFiles/struct.dir/struct/struct_endian.c.o.d -o CMakeFiles/struct.dir/struct/struct_endian.c.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct/struct_endian.c make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 1%] Linking C static library libstruct.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/cmake -P CMakeFiles/struct.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/cmake -E cmake_link_script CMakeFiles/struct.dir/link.txt --verbose=1 /usr/bin/ar qc libstruct.a CMakeFiles/struct.dir/struct/struct.c.o CMakeFiles/struct.dir/struct/struct_endian.c.o /usr/bin/ranlib libstruct.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 1%] Built target struct make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi/CMakeFiles/gwavi.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building C object thirdparty/libgwavi/CMakeFiles/gwavi.dir/gwavi.c.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi && /usr/bin/gcc -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -MD -MT thirdparty/libgwavi/CMakeFiles/gwavi.dir/gwavi.c.o -MF CMakeFiles/gwavi.dir/gwavi.c.o.d -o CMakeFiles/gwavi.dir/gwavi.c.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi/gwavi.c make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building C object thirdparty/libgwavi/CMakeFiles/gwavi.dir/fileio.c.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi && /usr/bin/gcc -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -MD -MT thirdparty/libgwavi/CMakeFiles/gwavi.dir/fileio.c.o -MF CMakeFiles/gwavi.dir/fileio.c.o.d -o CMakeFiles/gwavi.dir/fileio.c.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi/fileio.c make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building C object thirdparty/libgwavi/CMakeFiles/gwavi.dir/avi-utils.c.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi && /usr/bin/gcc -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DNDEBUG -fPIC -MD -MT thirdparty/libgwavi/CMakeFiles/gwavi.dir/avi-utils.c.o -MF CMakeFiles/gwavi.dir/avi-utils.c.o.d -o CMakeFiles/gwavi.dir/avi-utils.c.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi/avi-utils.c make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Linking C static library libgwavi.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi && /usr/bin/cmake -P CMakeFiles/gwavi.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi && /usr/bin/cmake -E cmake_link_script CMakeFiles/gwavi.dir/link.txt --verbose=1 /usr/bin/ar qc libgwavi.a CMakeFiles/gwavi.dir/gwavi.c.o CMakeFiles/gwavi.dir/fileio.c.o "CMakeFiles/gwavi.dir/avi-utils.c.o" /usr/bin/ranlib libgwavi.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target gwavi make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/core/CMakeFiles/Headers.dir/build.make avogadro/core/CMakeFiles/Headers.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core 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-specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT utilities/encodefile/CMakeFiles/encodefile.dir/encodefile.cxx.o -MF CMakeFiles/encodefile.dir/encodefile.cxx.o.d -o CMakeFiles/encodefile.dir/encodefile.cxx.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/encodefile/encodefile.cxx make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Linking CXX executable ../../bin/encodefile cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/encodefile && /usr/bin/cmake -E cmake_link_script CMakeFiles/encodefile.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches 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'/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/resdata/CMakeFiles/resdataparse.dir/build.make utilities/resdata/CMakeFiles/resdataparse.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/resdata /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata/CMakeFiles/resdataparse.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/resdata/CMakeFiles/resdataparse.dir/build.make utilities/resdata/CMakeFiles/resdataparse.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building CXX object utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata && /usr/bin/g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1 -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT utilities/resdata/CMakeFiles/resdataparse.dir/resdataparse.cxx.o -MF CMakeFiles/resdataparse.dir/resdataparse.cxx.o.d -o CMakeFiles/resdataparse.dir/resdataparse.cxx.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/resdata/resdataparse.cxx make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Linking CXX executable ../../bin/resdataparse cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata && /usr/bin/cmake -E cmake_link_script CMakeFiles/resdataparse.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/resdataparse.dir/resdataparse.cxx.o -o ../../bin/resdataparse make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target resdataparse make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/core/CMakeFiles/Core.dir/build.make avogadro/core/CMakeFiles/Core.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core/CMakeFiles/Core.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/core/CMakeFiles/Core.dir/build.make avogadro/core/CMakeFiles/Core.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building CXX object avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/angleiterator.cpp.o -MF CMakeFiles/Core.dir/angleiterator.cpp.o.d -o CMakeFiles/Core.dir/angleiterator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 0%] Building CXX object thirdparty/CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT thirdparty/CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o -MF CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o.d -o CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml/pugixml.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Linking CXX static library libpugixml.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/cmake -P CMakeFiles/pugixml.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty && /usr/bin/cmake -E cmake_link_script CMakeFiles/pugixml.dir/link.txt --verbose=1 /usr/bin/ar qc libpugixml.a CMakeFiles/pugixml.dir/pugixml/pugixml.cpp.o /usr/bin/ranlib libpugixml.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target pugixml make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/bodr/CMakeFiles/bodrparse.dir/build.make utilities/bodr/CMakeFiles/bodrparse.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/bodr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr/CMakeFiles/bodrparse.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/bodr/CMakeFiles/bodrparse.dir/build.make utilities/bodr/CMakeFiles/bodrparse.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building CXX object utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr && /usr/bin/g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT utilities/bodr/CMakeFiles/bodrparse.dir/bodrparse.cxx.o -MF CMakeFiles/bodrparse.dir/bodrparse.cxx.o.d -o CMakeFiles/bodrparse.dir/bodrparse.cxx.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/bodr/bodrparse.cxx make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Building CXX object avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o -MF CMakeFiles/Core.dir/atomutilities.cpp.o.d -o CMakeFiles/Core.dir/atomutilities.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomutilities.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Linking CXX executable ../../bin/bodrparse cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr && /usr/bin/cmake -E cmake_link_script CMakeFiles/bodrparse.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/bodrparse.dir/bodrparse.cxx.o -o ../../bin/bodrparse ../../thirdparty/libpugixml.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Built target bodrparse make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -MF CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o.d -o CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /usr/include/eigen3/Eigen/Core:257, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:8: In member function ‘Eigen::internal::mul_assign_op::assignCoeff(double&, double const&) const’, inlined from ‘Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>::assignCoeff(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:654:26, inlined from ‘Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>::assignCoeffByOuterInner(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:668:16, inlined from ‘Eigen::internal::copy_using_evaluator_DefaultTraversal_CompleteUnrolling >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>, 2, 3>::run(Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:211:35, inlined from ‘Eigen::internal::dense_assignment_loop >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>, 3, 2>::run(Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:456:92, inlined from ‘Eigen::internal::call_dense_assignment_loop, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op >(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:785:37, inlined from ‘Eigen::internal::Assignment, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op, Eigen::internal::Dense2Dense, void>::run(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31, inlined from ‘Eigen::internal::call_assignment_no_alias, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op >(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Eigen::internal::call_assignment, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op >(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&, Eigen::internal::enable_if, Eigen::Matrix >, Eigen::internal::evaluator_traits, Eigen::Matrix > >::Shape>::value, void*>::type)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27, inlined from ‘Eigen::DenseBase >::operator*=(double const&)’ at /usr/include/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h:20:28, inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:113:18: /usr/include/eigen3/Eigen/src/Core/functors/AssignmentFunctors.h:92:102: warning: ‘MEM[(double &)&pos3d + 16]’ may be used uninitialized [-Wmaybe-uninitialized] 92 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(DstScalar& a, const SrcScalar& b) const { a *= b; } | ~~^~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:70:11: note: ‘MEM[(double &)&pos3d + 16]’ was declared here 70 | Vector3 pos3d; | ^~~~~ In file included from /usr/include/c++/13/istream:41, from /usr/include/c++/13/sstream:40, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:6: In member function ‘std::basic_ostream >::operator<<(double)’, inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:173:76: /usr/include/c++/13/ostream:223:25: warning: ‘MEM[(Scalar &)&fpos3d]’ may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:71:11: note: ‘MEM[(Scalar &)&fpos3d]’ was declared here 71 | Vector3 fpos3d; | ^~~~~~ In member function ‘std::basic_ostream >::operator<<(double)’, inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:181:76: /usr/include/c++/13/ostream:223:25: warning: ‘MEM[(Scalar &)&fpos3d + 8]’ may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:71:11: note: ‘MEM[(Scalar &)&fpos3d + 8]’ was declared here 71 | Vector3 fpos3d; | ^~~~~~ In member function ‘std::basic_ostream >::operator<<(double)’, inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:189:76: /usr/include/c++/13/ostream:223:25: warning: ‘MEM[(Scalar &)&fpos3d + 16]’ may be used uninitialized [-Wmaybe-uninitialized] 223 | { return _M_insert(__f); } | ~~~~~~~~~^~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:71:11: note: ‘MEM[(Scalar &)&fpos3d + 16]’ was declared here 71 | Vector3 fpos3d; | ^~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o -MF CMakeFiles/Core.dir/crystaltools.cpp.o.d -o CMakeFiles/Core.dir/crystaltools.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp In file included from /usr/include/c++/13/vector:66, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:6: In member function ‘std::vector, std::allocator > >::resize(unsigned long, Eigen::Matrix const&)’, inlined from ‘Avogadro::Core::Array >::resize(unsigned long const&, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:177:19, inlined from ‘Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, Avogadro::Core::Array > const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:676:16, inlined from ‘Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, Avogadro::Core::Array > const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:666:6: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In function ‘Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, Avogadro::Core::Array > const&)’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector, std::allocator > >::_M_fill_insert(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned long, Eigen::Matrix const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:676:16: note: ‘’ declared here 676 | output.resize(coords.size()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~ In member function ‘std::vector, std::allocator > >::resize(unsigned long, Eigen::Matrix const&)’, inlined from ‘Avogadro::Core::Array >::resize(unsigned long const&, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:177:19, inlined from ‘Avogadro::Core::CrystalTools::fractionalCoordinates(Avogadro::Core::Molecule const&, Avogadro::Core::Array >&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:647:16, inlined from ‘Avogadro::Core::CrystalTools::fractionalCoordinates(Avogadro::Core::Molecule const&, Avogadro::Core::Array >&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:640:6: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /usr/include/c++/13/bits/vector.tcc: In function ‘Avogadro::Core::CrystalTools::fractionalCoordinates(Avogadro::Core::Molecule const&, Avogadro::Core::Array >&)’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector, std::allocator > >::_M_fill_insert(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned long, Eigen::Matrix const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:647:16: note: ‘’ declared here 647 | coords.resize(molecule.atomCount()); | ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/elements.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/elements.cpp.o -MF CMakeFiles/Core.dir/elements.cpp.o.d -o CMakeFiles/Core.dir/elements.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elements.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/cube.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 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'/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/dihedraliterator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/dihedraliterator.cpp.o -MF CMakeFiles/Core.dir/dihedraliterator.cpp.o.d -o CMakeFiles/Core.dir/dihedraliterator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/gaussianset.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/gaussianset.cpp.o -MF CMakeFiles/Core.dir/gaussianset.cpp.o.d -o CMakeFiles/Core.dir/gaussianset.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/gaussiansettools.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/gaussiansettools.cpp.o -MF CMakeFiles/Core.dir/gaussiansettools.cpp.o.d -o CMakeFiles/Core.dir/gaussiansettools.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussiansettools.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/layer.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/layer.cpp.o -MF CMakeFiles/Core.dir/layer.cpp.o.d -o CMakeFiles/Core.dir/layer.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o -MF CMakeFiles/Core.dir/layermanager.cpp.o.d -o CMakeFiles/Core.dir/layermanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/graph.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/graph.cpp.o -MF CMakeFiles/Core.dir/graph.cpp.o.d -o CMakeFiles/Core.dir/graph.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp: In member function ‘Avogadro::Core::Graph::removeEdge(unsigned long, unsigned long)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:311:5: warning: ‘edgeIndex’ may be used uninitialized [-Wmaybe-uninitialized] 311 | if (m_edgeMap[b][i] == edgeIndex) { | ^~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:299:10: note: ‘edgeIndex’ was declared here 299 | size_t edgeIndex; | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp: In member function ‘Avogadro::Core::Graph::swapEdgeIndices(unsigned long, unsigned long)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:421:17: warning: ‘MEM[(long unsigned int * &)&changeTo2]’ may be used uninitialized [-Wmaybe-uninitialized] 421 | *changeTo2[0] = edgeIndex2; | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:392:26: note: ‘MEM[(long unsigned int * &)&changeTo2]’ was declared here 392 | std::array changeTo2; | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:422:17: warning: ‘MEM[(long unsigned int * &)&changeTo2 + 8]’ may be used uninitialized [-Wmaybe-uninitialized] 422 | *changeTo2[1] = edgeIndex2; | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:392:26: note: ‘MEM[(long unsigned int * &)&changeTo2 + 8]’ was declared here 392 | std::array changeTo2; | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:423:17: warning: ‘MEM[(long unsigned int * &)&changeTo1]’ may be used uninitialized [-Wmaybe-uninitialized] 423 | *changeTo1[0] = edgeIndex1; | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:405:26: note: ‘MEM[(long unsigned int * &)&changeTo1]’ was declared here 405 | std::array changeTo1; | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:424:17: warning: ‘MEM[(long unsigned int * &)&changeTo1 + 8]’ may be used uninitialized [-Wmaybe-uninitialized] 424 | *changeTo1[1] = edgeIndex1; | ~~~~~~~~~~~~~~^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:405:26: note: ‘MEM[(long unsigned int * &)&changeTo1 + 8]’ was declared here 405 | std::array changeTo1; | ^~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o -MF CMakeFiles/Core.dir/mesh.cpp.o.d -o CMakeFiles/Core.dir/mesh.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.h:15, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::Core::Mesh::smooth(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp:189:46: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.192121].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp: In member function ‘Avogadro::Core::Mesh::smooth(int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp:189:46: note: ‘’ declared here 189 | Array planarList(m_vertices.size()); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/mutex.cpp.o -MF CMakeFiles/Core.dir/mutex.cpp.o.d -o CMakeFiles/Core.dir/mutex.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mutex.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/nameatomtyper.cpp.o -MF CMakeFiles/Core.dir/nameatomtyper.cpp.o.d -o CMakeFiles/Core.dir/nameatomtyper.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/nameatomtyper.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/neighborperceiver.cpp.o -MF CMakeFiles/Core.dir/neighborperceiver.cpp.o.d -o CMakeFiles/Core.dir/neighborperceiver.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o -MF CMakeFiles/Core.dir/molecule.cpp.o.d -o CMakeFiles/Core.dir/molecule.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h: In copy constructor ‘Avogadro::Core::Molecule::Molecule(const Avogadro::Core::Molecule&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:793:24: warning: ‘Avogadro::Core::Molecule::m_atomicNumbers’ will be initialized after [-Wreorder] 793 | Array m_atomicNumbers; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786:19: warning: ‘Eigen::VectorXd Avogadro::Core::Molecule::m_frozenAtomMask’ [-Wreorder] 786 | Eigen::VectorXd m_frozenAtomMask; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:35:1: warning: when initialized here [-Wreorder] 35 | Molecule::Molecule(const Molecule& other) | ^~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h: In constructor ‘Avogadro::Core::Molecule::Molecule(Avogadro::Core::Molecule&&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:793:24: warning: ‘Avogadro::Core::Molecule::m_atomicNumbers’ will be initialized after [-Wreorder] 793 | Array m_atomicNumbers; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786:19: warning: ‘Eigen::VectorXd Avogadro::Core::Molecule::m_frozenAtomMask’ [-Wreorder] 786 | Eigen::VectorXd m_frozenAtomMask; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:77:1: warning: when initialized here [-Wreorder] 77 | Molecule::Molecule(Molecule&& other) noexcept | ^~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp: In member function ‘void Avogadro::Core::Molecule::setFrozenAtom(Avogadro::Index, bool)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:281:31: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 281 | if (m_frozenAtomMask.rows() != 3*m_atomicNumbers.size()) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:290:18: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 290 | if (atomId * 3 <= m_frozenAtomMask.rows() - 3) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp: In member function ‘bool Avogadro::Core::Molecule::frozenAtom(Avogadro::Index) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:300:18: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 300 | if (atomId * 3 <= m_frozenAtomMask.rows() - 3) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp: In member function ‘void Avogadro::Core::Molecule::setFrozenAtomAxis(Avogadro::Index, int, bool)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:312:31: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare] 312 | if (m_frozenAtomMask.rows() != 3*m_atomicNumbers.size()) | ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:321:18: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare] 321 | if (atomId * 3 <= m_frozenAtomMask.rows() - 3) { | ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/ringperceiver.cpp.o -MF CMakeFiles/Core.dir/ringperceiver.cpp.o.d -o CMakeFiles/Core.dir/ringperceiver.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/secondarystructure.cpp.o -MF CMakeFiles/Core.dir/secondarystructure.cpp.o.d -o CMakeFiles/Core.dir/secondarystructure.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/residue.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/residue.cpp.o -MF CMakeFiles/Core.dir/residue.cpp.o.d -o CMakeFiles/Core.dir/residue.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp: In function ‘__static_initialization_and_destruction_0()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp:162:1: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 162 | } // namespace Avogadro | ^ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 5%] Building CXX object avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/slaterset.cpp.o -MF CMakeFiles/Core.dir/slaterset.cpp.o.d -o CMakeFiles/Core.dir/slaterset.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/slatersettools.cpp.o -MF CMakeFiles/Core.dir/slatersettools.cpp.o.d -o CMakeFiles/Core.dir/slatersettools.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slatersettools.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/symbolatomtyper.cpp.o -MF CMakeFiles/Core.dir/symbolatomtyper.cpp.o.d -o CMakeFiles/Core.dir/symbolatomtyper.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/symbolatomtyper.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/unitcell.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/unitcell.cpp.o -MF CMakeFiles/Core.dir/unitcell.cpp.o.d -o CMakeFiles/Core.dir/unitcell.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/spacegroups.cpp.o -MF CMakeFiles/Core.dir/spacegroups.cpp.o.d -o CMakeFiles/Core.dir/spacegroups.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroups.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/version.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/version.cpp.o -MF CMakeFiles/Core.dir/version.cpp.o.d -o CMakeFiles/Core.dir/version.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/version.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 7%] Building CXX object avogadro/core/CMakeFiles/Core.dir/sharedmutex.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/sharedmutex.cpp.o -MF CMakeFiles/Core.dir/sharedmutex.cpp.o.d -o CMakeFiles/Core.dir/sharedmutex.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/sharedmutex.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 6%] Building CXX object avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/variantmap.cpp.o -MF CMakeFiles/Core.dir/variantmap.cpp.o.d -o CMakeFiles/Core.dir/variantmap.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 7%] Building CXX object avogadro/core/CMakeFiles/Core.dir/avospglib.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/avospglib.cpp.o -MF CMakeFiles/Core.dir/avospglib.cpp.o.d -o CMakeFiles/Core.dir/avospglib.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avospglib.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 7%] Linking CXX shared library ../../lib/libAvogadroCore.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/cmake -E cmake_link_script CMakeFiles/Core.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroCore.so.1 -o ../../lib/libAvogadroCore.so.1.98.1 CMakeFiles/Core.dir/angleiterator.cpp.o CMakeFiles/Core.dir/atomutilities.cpp.o CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o CMakeFiles/Core.dir/crystaltools.cpp.o CMakeFiles/Core.dir/cube.cpp.o CMakeFiles/Core.dir/elements.cpp.o CMakeFiles/Core.dir/dihedraliterator.cpp.o CMakeFiles/Core.dir/gaussianset.cpp.o CMakeFiles/Core.dir/gaussiansettools.cpp.o CMakeFiles/Core.dir/graph.cpp.o CMakeFiles/Core.dir/layer.cpp.o CMakeFiles/Core.dir/layermanager.cpp.o CMakeFiles/Core.dir/mesh.cpp.o CMakeFiles/Core.dir/molecule.cpp.o CMakeFiles/Core.dir/mutex.cpp.o CMakeFiles/Core.dir/nameatomtyper.cpp.o CMakeFiles/Core.dir/neighborperceiver.cpp.o CMakeFiles/Core.dir/residue.cpp.o CMakeFiles/Core.dir/ringperceiver.cpp.o CMakeFiles/Core.dir/secondarystructure.cpp.o CMakeFiles/Core.dir/slaterset.cpp.o CMakeFiles/Core.dir/slatersettools.cpp.o CMakeFiles/Core.dir/spacegroups.cpp.o CMakeFiles/Core.dir/symbolatomtyper.cpp.o CMakeFiles/Core.dir/unitcell.cpp.o CMakeFiles/Core.dir/variantmap.cpp.o CMakeFiles/Core.dir/version.cpp.o CMakeFiles/Core.dir/sharedmutex.cpp.o CMakeFiles/Core.dir/avospglib.cpp.o -Wl,-rpath,:::::::::: /usr/lib64/libsymspg.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroCore.so.1.98.1 ../../lib/libAvogadroCore.so.1 ../../lib/libAvogadroCore.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp: In function ‘__static_initialization_and_destruction_0’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp:162:1: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without 162 | } // namespace Avogadro | ^ make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 7%] Built target Core make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/calc/CMakeFiles/Calc.dir/build.make avogadro/calc/CMakeFiles/Calc.dir/depend /usr/bin/make -f avogadro/io/CMakeFiles/IO.dir/build.make avogadro/io/CMakeFiles/IO.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io/CMakeFiles/IO.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/io/CMakeFiles/IO.dir/build.make avogadro/io/CMakeFiles/IO.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc/CMakeFiles/Calc.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/calc/CMakeFiles/Calc.dir/build.make avogadro/calc/CMakeFiles/Calc.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 8%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/chargemodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/g++ -DCalc_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/chargemodel.cpp.o -MF CMakeFiles/Calc.dir/chargemodel.cpp.o.d -o CMakeFiles/Calc.dir/chargemodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 8%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/g++ -DCalc_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/chargemanager.cpp.o -MF CMakeFiles/Calc.dir/chargemanager.cpp.o.d -o CMakeFiles/Calc.dir/chargemanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 8%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/g++ -DCalc_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/defaultmodel.cpp.o -MF CMakeFiles/Calc.dir/defaultmodel.cpp.o.d -o CMakeFiles/Calc.dir/defaultmodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 8%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/g++ -DCalc_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energycalculator.cpp.o -MF CMakeFiles/Calc.dir/energycalculator.cpp.o.d -o CMakeFiles/Calc.dir/energycalculator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 8%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/g++ -DCalc_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/energymanager.cpp.o -MF CMakeFiles/Calc.dir/energymanager.cpp.o.d -o CMakeFiles/Calc.dir/energymanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energymanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 8%] Building CXX object avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/g++ -DCalc_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/calc/CMakeFiles/Calc.dir/lennardjones.cpp.o -MF CMakeFiles/Calc.dir/lennardjones.cpp.o.d -o CMakeFiles/Calc.dir/lennardjones.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h: In constructor ‘Avogadro::Calc::LennardJones::LennardJones()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:56:7: warning: ‘Avogadro::Calc::LennardJones::m_exponent’ will be initialized after [-Wreorder] 56 | int m_exponent; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:52:19: warning: ‘Avogadro::Core::UnitCell* Avogadro::Calc::LennardJones::m_cell’ [-Wreorder] 52 | Core::UnitCell* m_cell; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:14:1: warning: when initialized here [-Wreorder] 14 | LennardJones::LennardJones() | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:52:19: warning: ‘Avogadro::Calc::LennardJones::m_cell’ will be initialized after [-Wreorder] 52 | Core::UnitCell* m_cell; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:51:19: warning: ‘Avogadro::Core::Molecule* Avogadro::Calc::LennardJones::m_molecule’ [-Wreorder] 51 | Core::Molecule* m_molecule; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:14:1: warning: when initialized here [-Wreorder] 14 | LennardJones::LennardJones() | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp: In member function ‘virtual void Avogadro::Calc::LennardJones::setMolecule(Avogadro::Core::Molecule*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:46:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 46 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:55:29: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 55 | for (Index j = i + 1; j < numAtoms; ++j) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp: In member function ‘virtual Avogadro::Real Avogadro::Calc::LennardJones::value(const Eigen::VectorXd&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:84:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 84 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:86:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 86 | for (Index j = i + 1; j < numAtoms; ++j) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 98 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:100:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 100 | for (Index j = i + 1; j < numAtoms; ++j) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp: In member function ‘virtual void Avogadro::Calc::LennardJones::gradient(const Eigen::VectorXd&, Eigen::VectorXd&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:128:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 128 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:130:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 130 | for (Index j = i + 1; j < numAtoms; ++j) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:154:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 154 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:156:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 156 | for (Index j = i + 1; j < numAtoms; ++j) { | ~~^~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 7%] Building CXX object avogadro/io/CMakeFiles/IO.dir/cjsonformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/cjsonformat.cpp.o -MF CMakeFiles/IO.dir/cjsonformat.cpp.o.d -o CMakeFiles/IO.dir/cjsonformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cjsonformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 9%] Linking CXX shared library ../../lib/libAvogadroCalc.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/cmake -E cmake_link_script CMakeFiles/Calc.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroCalc.so.1 -o ../../lib/libAvogadroCalc.so.1.98.1 CMakeFiles/Calc.dir/chargemodel.cpp.o CMakeFiles/Calc.dir/chargemanager.cpp.o CMakeFiles/Calc.dir/defaultmodel.cpp.o CMakeFiles/Calc.dir/energycalculator.cpp.o CMakeFiles/Calc.dir/energymanager.cpp.o CMakeFiles/Calc.dir/lennardjones.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroCore.so.1.98.1 cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroCalc.so.1.98.1 ../../lib/libAvogadroCalc.so.1 ../../lib/libAvogadroCalc.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 9%] Built target Calc make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 9%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/textlabelbase_vs.h textlabelbase_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 10%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrow_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrow_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/arrow_vs.h arrow_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 10%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylinders_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylinders_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/cylinders_fs.h cylinders_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 10%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylinders_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylinders_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/cylinders_vs.h cylinders_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 10%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedline_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedline_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/dashedline_fs.h dashedline_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 10%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedline_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedline_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/dashedline_vs.h dashedline_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 10%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestrip_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestrip_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/linestrip_fs.h linestrip_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestrip_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestrip_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/linestrip_vs.h linestrip_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/mesh_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/mesh_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/mesh_fs.h mesh_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/mesh_opaque_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/mesh_opaque_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/mesh_opaque_fs.h mesh_opaque_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/mesh_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/mesh_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/mesh_vs.h mesh_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solid_first_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solid_first_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/solid_first_fs.h solid_first_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solid_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solid_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/solid_vs.h solid_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_bake_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_bake_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_bake_fs.h sphere_ao_bake_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_bake_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_bake_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_bake_vs.h sphere_ao_bake_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_depth_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_depth_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_depth_fs.h sphere_ao_depth_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 11%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_depth_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_depth_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_depth_vs.h sphere_ao_depth_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 12%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_render_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_render_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_render_fs.h sphere_ao_render_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 12%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_render_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_render_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_render_vs.h sphere_ao_render_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 13%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheres_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheres_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/spheres_fs.h spheres_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 13%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheres_vs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheres_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/spheres_vs.h spheres_vs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 13%] Encoding /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase_fs.glsl cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/textlabelbase_fs.h textlabelbase_fs make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/CMakeFiles/Rendering.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 13%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arcsector.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arcsector.cpp.o -MF CMakeFiles/Rendering.dir/arcsector.cpp.o.d -o CMakeFiles/Rendering.dir/arcsector.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::Rendering::ArcSector::setArcSector(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float, float)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp:28:33: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.200254].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp: In member function ‘Avogadro::Rendering::ArcSector::setArcSector(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float, float)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp:28:33: note: ‘’ declared here 28 | Array verts(numVerts); | ^ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 13%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arcstrip.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arcstrip.cpp.o -MF CMakeFiles/Rendering.dir/arcstrip.cpp.o.d -o CMakeFiles/Rendering.dir/arcstrip.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::Rendering::ArcStrip::setArc(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float, float, float)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp:23:39: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.201662].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp: In member function ‘Avogadro::Rendering::ArcStrip::setArc(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float, float, float)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp:23:39: note: ‘’ declared here 23 | Core::Array verts(numVerts); | ^ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 9%] Building CXX object avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o -MF CMakeFiles/IO.dir/cmlformat.cpp.o.d -o CMakeFiles/IO.dir/cmlformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cmlformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 13%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arrowgeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arrowgeometry.cpp.o -MF CMakeFiles/Rendering.dir/arrowgeometry.cpp.o.d -o CMakeFiles/Rendering.dir/arrowgeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 14%] Building CXX object avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/dcdformat.cpp.o -MF CMakeFiles/IO.dir/dcdformat.cpp.o.d -o CMakeFiles/IO.dir/dcdformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/dcdformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/beziergeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/beziergeometry.cpp.o -MF CMakeFiles/Rendering.dir/beziergeometry.cpp.o.d -o CMakeFiles/Rendering.dir/beziergeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/fileformat.cpp.o -MF CMakeFiles/IO.dir/fileformat.cpp.o.d -o CMakeFiles/IO.dir/fileformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/bufferobject.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/bufferobject.cpp.o -MF CMakeFiles/Rendering.dir/bufferobject.cpp.o.d -o CMakeFiles/Rendering.dir/bufferobject.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/fileformatmanager.cpp.o -MF CMakeFiles/IO.dir/fileformatmanager.cpp.o.d -o CMakeFiles/IO.dir/fileformatmanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o -MF CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/cartoongeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/cartoongeometry.cpp.o -MF CMakeFiles/Rendering.dir/cartoongeometry.cpp.o.d -o CMakeFiles/Rendering.dir/cartoongeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:46:21: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&vert1].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:43:23: note: ‘vert1’ declared here 43 | ColorNormalVertex vert1; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:46:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:43:23: note: ‘vert1’ declared here 43 | ColorNormalVertex vert1; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:46:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].padding’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:43:23: note: ‘vert1’ declared here 43 | ColorNormalVertex vert1; | ^~~~~ In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:51:21: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&vert2].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:48:23: note: ‘vert2’ declared here 48 | ColorNormalVertex vert2; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:51:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:48:23: note: ‘vert2’ declared here 48 | ColorNormalVertex vert2; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:51:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].padding’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:48:23: note: ‘vert2’ declared here 48 | ColorNormalVertex vert2; | ^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o -MF CMakeFiles/IO.dir/gromacsformat.cpp.o.d -o CMakeFiles/IO.dir/gromacsformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/gromacsformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o -MF CMakeFiles/IO.dir/mdlformat.cpp.o.d -o CMakeFiles/IO.dir/mdlformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mdlformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/camera.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/camera.cpp.o -MF CMakeFiles/Rendering.dir/camera.cpp.o.d -o CMakeFiles/Rendering.dir/camera.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o -MF CMakeFiles/IO.dir/vaspformat.cpp.o.d -o CMakeFiles/IO.dir/vaspformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/vaspformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/curvegeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/curvegeometry.cpp.o -MF CMakeFiles/Rendering.dir/curvegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/curvegeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:6: In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:63:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:59:23: note: ‘vert1’ declared here 59 | ColorNormalVertex vert1; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:63:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].padding’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:59:23: note: ‘vert1’ declared here 59 | ColorNormalVertex vert1; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:69:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:65:23: note: ‘vert2’ declared here 65 | ColorNormalVertex vert2; | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:69:21: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].padding’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform const&, Eigen::Transform const&, bool) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:65:23: note: ‘vert2’ declared here 65 | ColorNormalVertex vert2; | ^~~~~ In file included from /usr/include/eigen3/Eigen/Core:253, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:12: In member function ‘Eigen::internal::scalar_difference_op::operator()(float const&, float const&) const’, inlined from ‘Eigen::internal::binary_evaluator, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, float, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22, inlined from ‘Eigen::internal::unary_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const>, Eigen::internal::IndexBased, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:583:40, inlined from ‘Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 0, 1>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 0, 3>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:110:78, inlined from ‘Eigen::internal::redux_impl, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 3, 2>::run, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&, Eigen::CwiseUnaryOp, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> const&)float’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:350:65, inlined from ‘Eigen::DenseBase, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::redux >(Eigen::internal::scalar_sum_op const&) constfloat’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56, inlined from ‘Eigen::DenseBase, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25, inlined from ‘Eigen::MatrixBase, Eigen::Matrix const, Eigen::Matrix const> >::squaredNorm() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:98:46, inlined from ‘Eigen::MatrixBase, Eigen::Matrix const, Eigen::Matrix const> >::normalized() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:128:31, inlined from ‘Avogadro::Rendering::CurveGeometry::update(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:97:45: /usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:359:130: warning: ‘MEM[(float &)&previous]’ may be used uninitialized [-Wmaybe-uninitialized] 359 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; } | ^ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::update(int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:87:12: note: ‘MEM[(float &)&previous]’ was declared here 87 | Vector3f previous; | ^~~~~~~~ In member function ‘Eigen::internal::scalar_difference_op::operator()(float const&, float const&) const’, inlined from ‘Eigen::internal::binary_evaluator, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, float, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22, inlined from ‘Eigen::internal::unary_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const>, Eigen::internal::IndexBased, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:583:40, inlined from ‘Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 1, 1>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 1, 2>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:110:78, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 0, 3>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:111:96, inlined from ‘Eigen::internal::redux_impl, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 3, 2>::run, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&, Eigen::CwiseUnaryOp, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> const&)float’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:350:65, inlined from ‘Eigen::DenseBase, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::redux >(Eigen::internal::scalar_sum_op const&) constfloat’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56, inlined from ‘Eigen::DenseBase, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25, inlined from ‘Eigen::MatrixBase, Eigen::Matrix const, Eigen::Matrix const> >::squaredNorm() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:98:46, inlined from ‘Eigen::MatrixBase, Eigen::Matrix const, Eigen::Matrix const> >::normalized() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:128:31, inlined from ‘Avogadro::Rendering::CurveGeometry::update(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:97:45: /usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:359:130: warning: ‘MEM[(float &)&previous + 4]’ may be used uninitialized [-Wmaybe-uninitialized] 359 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; } | ^ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::update(int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:87:12: note: ‘MEM[(float &)&previous + 4]’ was declared here 87 | Vector3f previous; | ^~~~~~~~ In member function ‘Eigen::internal::scalar_difference_op::operator()(float const&, float const&) const’, inlined from ‘Eigen::internal::binary_evaluator, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, float, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22, inlined from ‘Eigen::internal::unary_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const>, Eigen::internal::IndexBased, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:583:40, inlined from ‘Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 2, 1>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 1, 2>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:111:96, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 0, 3>::run(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:111:96, inlined from ‘Eigen::internal::redux_impl, Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >, 3, 2>::run, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >(Eigen::internal::redux_evaluator, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> > const&, Eigen::internal::scalar_sum_op const&, Eigen::CwiseUnaryOp, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> const&)float’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:350:65, inlined from ‘Eigen::DenseBase, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::redux >(Eigen::internal::scalar_sum_op const&) constfloat’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56, inlined from ‘Eigen::DenseBase, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25, inlined from ‘Eigen::MatrixBase, Eigen::Matrix const, Eigen::Matrix const> >::squaredNorm() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:98:46, inlined from ‘Eigen::MatrixBase, Eigen::Matrix const, Eigen::Matrix const> >::normalized() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:128:31, inlined from ‘Avogadro::Rendering::CurveGeometry::update(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:97:45: /usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:359:130: warning: ‘MEM[(float &)&previous + 8]’ may be used uninitialized [-Wmaybe-uninitialized] 359 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; } | ^ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::update(int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:87:12: note: ‘MEM[(float &)&previous + 8]’ was declared here 87 | Vector3f previous; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o -MF CMakeFiles/IO.dir/pdbformat.cpp.o.d -o CMakeFiles/IO.dir/pdbformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/pdbformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 16%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/cylindergeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/cylindergeometry.cpp.o -MF CMakeFiles/Rendering.dir/cylindergeometry.cpp.o.d -o CMakeFiles/Rendering.dir/cylindergeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:9: In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:119:35: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:112:25: note: ‘vert’ declared here 112 | ColorNormalVertex vert(itCylinder->color, -direction, position1); | ^~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:119:35: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert].padding’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:112:25: note: ‘vert’ declared here 112 | ColorNormalVertex vert(itCylinder->color, -direction, position1); | ^~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:122:35: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:113:25: note: ‘vert2’ declared here 113 | ColorNormalVertex vert2(itCylinder->color2, -direction, position1); | ^~~~~ In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:122:35: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].padding’ may be used uninitialized [-Wmaybe-uninitialized] 67 | struct ColorNormalVertex | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:113:25: note: ‘vert2’ declared here 113 | ColorNormalVertex vert2(itCylinder->color2, -direction, position1); | ^~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o -MF CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/drawable.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/drawable.cpp.o -MF CMakeFiles/Rendering.dir/drawable.cpp.o.d -o CMakeFiles/Rendering.dir/drawable.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/geometrynode.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/geometrynode.cpp.o -MF CMakeFiles/Rendering.dir/geometrynode.cpp.o.d -o CMakeFiles/Rendering.dir/geometrynode.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/xyzformat.cpp.o -MF CMakeFiles/IO.dir/xyzformat.cpp.o.d -o CMakeFiles/IO.dir/xyzformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/xyzformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/geometryvisitor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/geometryvisitor.cpp.o -MF CMakeFiles/Rendering.dir/geometryvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/geometryvisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/groupnode.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/groupnode.cpp.o -MF CMakeFiles/Rendering.dir/groupnode.cpp.o.d -o CMakeFiles/Rendering.dir/groupnode.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/glrenderer.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/glrenderer.cpp.o -MF CMakeFiles/Rendering.dir/glrenderer.cpp.o.d -o CMakeFiles/Rendering.dir/glrenderer.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 17%] Building CXX object avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/trrformat.cpp.o -MF CMakeFiles/IO.dir/trrformat.cpp.o.d -o CMakeFiles/IO.dir/trrformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/trrformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/glrendervisitor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/glrendervisitor.cpp.o -MF CMakeFiles/Rendering.dir/glrendervisitor.cpp.o.d -o CMakeFiles/Rendering.dir/glrendervisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/linestripgeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/linestripgeometry.cpp.o -MF CMakeFiles/Rendering.dir/linestripgeometry.cpp.o.d -o CMakeFiles/Rendering.dir/linestripgeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/meshgeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/meshgeometry.cpp.o -MF CMakeFiles/Rendering.dir/meshgeometry.cpp.o.d -o CMakeFiles/Rendering.dir/meshgeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.cpp:6: In member function ‘Avogadro::Rendering::MeshGeometry::PackedVertex::PackedVertex(Avogadro::Rendering::MeshGeometry::PackedVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::MeshGeometry::PackedVertex*, Avogadro::Rendering::MeshGeometry::PackedVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::MeshGeometry::PackedVertex*, Avogadro::Rendering::MeshGeometry::PackedVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::MeshGeometry::PackedVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Core::Array::push_back(Avogadro::Rendering::MeshGeometry::PackedVertex const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:250:22, inlined from ‘Avogadro::Rendering::MeshGeometry::addVertices(Avogadro::Core::Array > const&, Avogadro::Core::Array > const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.cpp:263:25: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:25:10: warning: ‘MEM[(const struct PackedVertex &)&D.269568].padding’ may be used uninitialized [-Wmaybe-uninitialized] 25 | struct PackedVertex | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.cpp: In member function ‘Avogadro::Rendering::MeshGeometry::addVertices(Avogadro::Core::Array > const&, Avogadro::Core::Array > const&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.cpp:263:71: note: ‘’ declared here 263 | m_vertices.push_back(PackedVertex(tmpColor, *(nIter++), *(vIter++))); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/node.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/node.cpp.o -MF CMakeFiles/Rendering.dir/node.cpp.o.d -o CMakeFiles/Rendering.dir/node.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/turbomoleformat.cpp.o -MF CMakeFiles/IO.dir/turbomoleformat.cpp.o.d -o CMakeFiles/IO.dir/turbomoleformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/turbomoleformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/plyvisitor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/plyvisitor.cpp.o -MF CMakeFiles/Rendering.dir/plyvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/plyvisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/povrayvisitor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/povrayvisitor.cpp.o -MF CMakeFiles/Rendering.dir/povrayvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/povrayvisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/quad.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/quad.cpp.o -MF CMakeFiles/Rendering.dir/quad.cpp.o.d -o CMakeFiles/Rendering.dir/quad.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::Rendering::Quad::setQuad(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp:20:26: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.202704].m_storage’ is used uninitialized [-Wuninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp: In member function ‘Avogadro::Rendering::Quad::setQuad(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp:20:26: note: ‘’ declared here 20 | Array verts(4); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 18%] Building CXX object avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o -MF CMakeFiles/IO.dir/lammpsformat.cpp.o.d -o CMakeFiles/IO.dir/lammpsformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp: In member function ‘Avogadro::Io::LammpsTrajectoryFormat::read(std::basic_istream >&, Avogadro::Core::Molecule&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp:268:5: warning: ‘numAtoms2’ may be used uninitialized [-Wmaybe-uninitialized] 268 | if (numAtoms2 != numAtoms) { | ^~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp:231:10: note: ‘numAtoms2’ was declared here 231 | size_t numAtoms2; | ^~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/quadoutline.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/quadoutline.cpp.o -MF CMakeFiles/Rendering.dir/quadoutline.cpp.o.d -o CMakeFiles/Rendering.dir/quadoutline.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::Rendering::QuadOutline::setQuad(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp:16:26: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.201363].m_storage’ is used uninitialized [-Wuninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp: In member function ‘Avogadro::Rendering::QuadOutline::setQuad(Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, Eigen::Matrix const&, float)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp:16:26: note: ‘’ declared here 16 | Array verts(5); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/io/CMakeFiles/IO.dir/hdf5dataformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/hdf5dataformat.cpp.o -MF CMakeFiles/IO.dir/hdf5dataformat.cpp.o.d -o CMakeFiles/IO.dir/hdf5dataformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/scene.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/scene.cpp.o -MF CMakeFiles/Rendering.dir/scene.cpp.o.d -o CMakeFiles/Rendering.dir/scene.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/shader.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/shader.cpp.o -MF CMakeFiles/Rendering.dir/shader.cpp.o.d -o CMakeFiles/Rendering.dir/shader.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/shaderprogram.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/shaderprogram.cpp.o -MF CMakeFiles/Rendering.dir/shaderprogram.cpp.o.d -o CMakeFiles/Rendering.dir/shaderprogram.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/solidpipeline.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/solidpipeline.cpp.o -MF CMakeFiles/Rendering.dir/solidpipeline.cpp.o.d -o CMakeFiles/Rendering.dir/solidpipeline.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/spheregeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/spheregeometry.cpp.o -MF CMakeFiles/Rendering.dir/spheregeometry.cpp.o.d -o CMakeFiles/Rendering.dir/spheregeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:9: In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:94:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here 92 | ColorTextureVertex vert(itSphere->center, itSphere->color, | ^~~~ In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:96:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here 92 | ColorTextureVertex vert(itSphere->center, itSphere->color, | ^~~~ In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:98:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here 92 | ColorTextureVertex vert(itSphere->center, itSphere->color, | ^~~~ In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:100:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here 92 | ColorTextureVertex vert(itSphere->center, itSphere->color, | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textlabel2d.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textlabel2d.cpp.o -MF CMakeFiles/Rendering.dir/textlabel2d.cpp.o.d -o CMakeFiles/Rendering.dir/textlabel2d.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel2d.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textlabel3d.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textlabel3d.cpp.o -MF CMakeFiles/Rendering.dir/textlabel3d.cpp.o.d -o CMakeFiles/Rendering.dir/textlabel3d.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel3d.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textlabelbase.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textlabelbase.cpp.o -MF CMakeFiles/Rendering.dir/textlabelbase.cpp.o.d -o CMakeFiles/Rendering.dir/textlabelbase.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 19%] Building CXX object avogadro/io/CMakeFiles/IO.dir/mmtfformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/mmtfformat.cpp.o -MF CMakeFiles/IO.dir/mmtfformat.cpp.o.d -o CMakeFiles/IO.dir/mmtfformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mmtfformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 20%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textproperties.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textproperties.cpp.o -MF CMakeFiles/Rendering.dir/textproperties.cpp.o.d -o CMakeFiles/Rendering.dir/textproperties.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 21%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o -MF CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o.d -o CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textrenderstrategy.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/texture2d.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/texture2d.cpp.o -MF CMakeFiles/Rendering.dir/texture2d.cpp.o.d -o CMakeFiles/Rendering.dir/texture2d.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/transformnode.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/transformnode.cpp.o -MF CMakeFiles/Rendering.dir/transformnode.cpp.o.d -o CMakeFiles/Rendering.dir/transformnode.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/visitor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/visitor.cpp.o -MF CMakeFiles/Rendering.dir/visitor.cpp.o.d -o CMakeFiles/Rendering.dir/visitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/volumegeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/volumegeometry.cpp.o -MF CMakeFiles/Rendering.dir/volumegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/volumegeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/volumegeometry.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o -MF CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 22%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o -MF CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o.d -o CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:9: In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1156:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here 1150 | ColorTextureVertex vert( | ^~~~ In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1158:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here 1150 | ColorTextureVertex vert( | ^~~~ In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1160:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here 1150 | ColorTextureVertex vert( | ^~~~ In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’, inlined from ‘std::__new_allocator::construct(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1154:31: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized] 40 | struct ColorTextureVertex | ^~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here 1150 | ColorTextureVertex vert( | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 23%] Linking CXX shared library ../../lib/libAvogadroRendering.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/cmake -E cmake_link_script CMakeFiles/Rendering.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroRendering.so.1 -o ../../lib/libAvogadroRendering.so.1.98.1 CMakeFiles/Rendering.dir/arcsector.cpp.o CMakeFiles/Rendering.dir/arcstrip.cpp.o CMakeFiles/Rendering.dir/arrowgeometry.cpp.o CMakeFiles/Rendering.dir/beziergeometry.cpp.o CMakeFiles/Rendering.dir/bufferobject.cpp.o CMakeFiles/Rendering.dir/bsplinegeometry.cpp.o CMakeFiles/Rendering.dir/cartoongeometry.cpp.o CMakeFiles/Rendering.dir/camera.cpp.o CMakeFiles/Rendering.dir/curvegeometry.cpp.o CMakeFiles/Rendering.dir/cylindergeometry.cpp.o CMakeFiles/Rendering.dir/dashedlinegeometry.cpp.o CMakeFiles/Rendering.dir/drawable.cpp.o CMakeFiles/Rendering.dir/geometrynode.cpp.o CMakeFiles/Rendering.dir/geometryvisitor.cpp.o CMakeFiles/Rendering.dir/groupnode.cpp.o CMakeFiles/Rendering.dir/glrenderer.cpp.o CMakeFiles/Rendering.dir/glrendervisitor.cpp.o CMakeFiles/Rendering.dir/linestripgeometry.cpp.o CMakeFiles/Rendering.dir/meshgeometry.cpp.o CMakeFiles/Rendering.dir/node.cpp.o CMakeFiles/Rendering.dir/plyvisitor.cpp.o CMakeFiles/Rendering.dir/povrayvisitor.cpp.o CMakeFiles/Rendering.dir/quad.cpp.o CMakeFiles/Rendering.dir/quadoutline.cpp.o CMakeFiles/Rendering.dir/scene.cpp.o CMakeFiles/Rendering.dir/shader.cpp.o CMakeFiles/Rendering.dir/shaderprogram.cpp.o CMakeFiles/Rendering.dir/solidpipeline.cpp.o CMakeFiles/Rendering.dir/spheregeometry.cpp.o CMakeFiles/Rendering.dir/textlabel2d.cpp.o CMakeFiles/Rendering.dir/textlabel3d.cpp.o CMakeFiles/Rendering.dir/textlabelbase.cpp.o CMakeFiles/Rendering.dir/textproperties.cpp.o CMakeFiles/Rendering.dir/textrenderstrategy.cpp.o CMakeFiles/Rendering.dir/texture2d.cpp.o CMakeFiles/Rendering.dir/transformnode.cpp.o CMakeFiles/Rendering.dir/visitor.cpp.o CMakeFiles/Rendering.dir/volumegeometry.cpp.o CMakeFiles/Rendering.dir/vrmlvisitor.cpp.o CMakeFiles/Rendering.dir/ambientocclusionspheregeometry.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroCore.so.1.98.1 /usr/lib64/libGLEW.so /usr/lib64/libGLX.so /usr/lib64/libOpenGL.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroRendering.so.1.98.1 ../../lib/libAvogadroRendering.so.1 ../../lib/libAvogadroRendering.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 23%] Built target Rendering make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 21%] Linking CXX shared library ../../lib/libAvogadroIO.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/cmake -E cmake_link_script CMakeFiles/IO.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroIO.so.1 -o ../../lib/libAvogadroIO.so.1.98.1 CMakeFiles/IO.dir/cjsonformat.cpp.o CMakeFiles/IO.dir/cmlformat.cpp.o CMakeFiles/IO.dir/dcdformat.cpp.o CMakeFiles/IO.dir/fileformat.cpp.o CMakeFiles/IO.dir/fileformatmanager.cpp.o CMakeFiles/IO.dir/gromacsformat.cpp.o CMakeFiles/IO.dir/mdlformat.cpp.o CMakeFiles/IO.dir/vaspformat.cpp.o CMakeFiles/IO.dir/pdbformat.cpp.o CMakeFiles/IO.dir/xyzformat.cpp.o CMakeFiles/IO.dir/trrformat.cpp.o CMakeFiles/IO.dir/turbomoleformat.cpp.o CMakeFiles/IO.dir/lammpsformat.cpp.o CMakeFiles/IO.dir/hdf5dataformat.cpp.o CMakeFiles/IO.dir/mmtfformat.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: /usr/lib64/libhdf5.so ../../lib/libAvogadroCore.so.1.98.1 ../../thirdparty/libstruct.a ../../thirdparty/libpugixml.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroIO.so.1 ../../lib/libAvogadroIO.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 23%] Built target IO make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/quantumio/CMakeFiles/QuantumIO.dir/build.make avogadro/quantumio/CMakeFiles/QuantumIO.dir/depend /usr/bin/make -f avogadro/command/CMakeFiles/avocjsontocml.dir/build.make avogadro/command/CMakeFiles/avocjsontocml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio/CMakeFiles/QuantumIO.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/quantumio/CMakeFiles/QuantumIO.dir/build.make 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/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command && /usr/bin/g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fvisibility=hidden 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-specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/avocjsontocml.dir/cjsontocml.cpp.o -o ../../bin/avocjsontocml -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 23%] Built target avocjsontocml make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/avobabel.dir/build.make avogadro/command/CMakeFiles/avobabel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/avobabel.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/avobabel.dir/build.make avogadro/command/CMakeFiles/avobabel.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 23%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/gamessus.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection 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-isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/command/CMakeFiles/avobabel.dir/avobabel.cpp.o -MF CMakeFiles/avobabel.dir/avobabel.cpp.o.d -o CMakeFiles/avobabel.dir/avobabel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command/avobabel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 24%] Linking CXX executable ../../bin/avobabel cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command && /usr/bin/cmake -E cmake_link_script CMakeFiles/avobabel.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/avobabel.dir/avobabel.cpp.o -o ../../bin/avobabel -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 24%] Built target avobabel make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 24%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o -MF CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o.d -o CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp: In member function ‘void Avogadro::QuantumIO::GaussianFchk::processLine(std::istream&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:194:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 194 | for (unsigned int i = 0; i < m_normalModes; ++i) { | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:211:23: warning: comparison of integer expressions of different signedness: ‘std::vector::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 211 | if (tmpVec.size() == m_numAtoms * 3 * m_normalModes) { | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:212:34: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 212 | for (unsigned int i = 0; i < m_normalModes; ++i) { | ~~^~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:214:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 214 | for (unsigned int j = 0; j < m_numAtoms; ++j) { | ~~^~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 25%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o -MF CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o.d -o CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 25%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/genericoutput.cpp.o -MF CMakeFiles/QuantumIO.dir/genericoutput.cpp.o.d -o CMakeFiles/QuantumIO.dir/genericoutput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 24%] Automatic MOC for target QtGui cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtgui/backgroundfileformat.h" AutoGen: Parsing "SRC:/avogadro/qtgui/colorbutton.h" AutoGen: Parsing "SRC:/avogadro/qtgui/containerwidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/customelementdialog.h" AutoGen: Parsing "SRC:/avogadro/qtgui/elementdetail_p.h" AutoGen: Parsing "SRC:/avogadro/qtgui/elementitem_p.h" AutoGen: Parsing "SRC:/avogadro/qtgui/elementtranslator.h" AutoGen: Parsing "SRC:/avogadro/qtgui/extensionplugin.h" AutoGen: Parsing "SRC:/avogadro/qtgui/filebrowsewidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/fileformatdialog.h" AutoGen: Parsing "SRC:/avogadro/qtgui/generichighlighter.h" AutoGen: Parsing "SRC:/avogadro/qtgui/hydrogentools.h" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacescript.h" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacewidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/jsonwidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/layermodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/meshgenerator.h" AutoGen: Parsing "SRC:/avogadro/qtgui/molecule.h" AutoGen: Parsing "SRC:/avogadro/qtgui/moleculemodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/multiviewwidget.h" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictablescene_p.h" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictableview.h" AutoGen: Parsing "SRC:/avogadro/qtgui/persistentatom.h" AutoGen: Parsing "SRC:/avogadro/qtgui/persistentbond.h" AutoGen: Parsing "SRC:/avogadro/qtgui/pluginlayermanager.h" AutoGen: Parsing "SRC:/avogadro/qtgui/pythonscript.h" AutoGen: Parsing "SRC:/avogadro/qtgui/rwlayermanager.h" AutoGen: Parsing "SRC:/avogadro/qtgui/rwmolecule.h" AutoGen: Parsing "SRC:/avogadro/qtgui/sceneplugin.h" AutoGen: Parsing "SRC:/avogadro/qtgui/scenepluginmodel.h" AutoGen: Parsing "SRC:/avogadro/qtgui/scriptloader.h" AutoGen: Parsing "SRC:/avogadro/qtgui/toolplugin.h" AutoGen: Parsing "SRC:/avogadro/qtgui/utilities.h" AutoGen: Parsing "SRC:/avogadro/qtgui/viewfactory.h" AutoGen: Parsing "SRC:/build/avogadro/qtgui/avogadroqtguiexport.h" AutoGen: Parsing "SRC:/avogadro/qtgui/backgroundfileformat.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/colorbutton.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/containerwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/customelementdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/elementdetail_p.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/elementitem_p.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/elementtranslator.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/extensionplugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/filebrowsewidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/fileformatdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/generichighlighter.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/hydrogentools.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacescript.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/interfacewidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/jsonwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/layermodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/meshgenerator.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/molecule.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/moleculemodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/multiviewwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictablescene_p.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/periodictableview.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/pluginlayermanager.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/pythonscript.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/rwlayermanager.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/rwmolecule.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/sceneplugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/scenepluginmodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/scriptloader.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/toolplugin.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/utilities.cpp" AutoGen: Parsing "SRC:/avogadro/qtgui/viewfactory.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/backgroundfileformat.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/backgroundfileformat.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/colorbutton.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/containerwidget.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/customelementdialog.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/elementtranslator.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementtranslator.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/extensionplugin.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/filebrowsewidget.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/fileformatdialog.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/generichighlighter.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/interfacescript.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/interfacewidget.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/jsonwidget.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/layermodel.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/meshgenerator.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/molecule.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/moleculemodel.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/multiviewwidget.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/periodictablescene_p.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/periodictableview.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/pythonscript.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/rwmolecule.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/sceneplugin.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/scenepluginmodel.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/scriptloader.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/toolplugin.h" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/include/multiviewwidget.moc", because it doesn't exist, from "SRC:/avogadro/qtgui/multiviewwidget.cpp" /usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include/multiviewwidget.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/include/multiviewwidget.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtgui/QtGui_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 25%] Built target QtGui_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 25%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/molden.cpp.o -MF CMakeFiles/QuantumIO.dir/molden.cpp.o.d -o CMakeFiles/QuantumIO.dir/molden.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Generating ui_customelementdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/ui_customelementdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Generating qrc_qtgui.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/lib64/qt5/bin/rcc --name qtgui --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/qrc_qtgui.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/qtgui.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/mopacaux.cpp.o -MF CMakeFiles/QuantumIO.dir/mopacaux.cpp.o.d -o CMakeFiles/QuantumIO.dir/mopacaux.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o -MF CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o.d -o CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/backgroundfileformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/colorbutton.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/colorbutton.cpp.o -MF CMakeFiles/QtGui.dir/colorbutton.cpp.o.d -o CMakeFiles/QtGui.dir/colorbutton.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/containerwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/containerwidget.cpp.o -MF CMakeFiles/QtGui.dir/containerwidget.cpp.o.d -o CMakeFiles/QtGui.dir/containerwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o -MF CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o.d -o CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp In file included from /usr/include/eigen3/Eigen/Core:257, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/matrix.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:13, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp:8: In member function ‘Eigen::internal::mul_assign_op::assignCoeff(double&, double const&) const’, inlined from ‘Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>::assignCoeff(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:654:26, inlined from ‘Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>::assignCoeffByOuterInner(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:668:16, inlined from ‘Eigen::internal::copy_using_evaluator_DefaultTraversal_CompleteUnrolling >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>, 2, 3>::run(Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:211:35, inlined from ‘Eigen::internal::dense_assignment_loop >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>, 3, 2>::run(Eigen::internal::generic_dense_assignment_kernel >, Eigen::internal::evaluator, Eigen::Matrix > >, Eigen::internal::mul_assign_op, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:456:92, inlined from ‘Eigen::internal::call_dense_assignment_loop, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op >(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:785:37, inlined from ‘Eigen::internal::Assignment, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op, Eigen::internal::Dense2Dense, void>::run(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31, inlined from ‘Eigen::internal::call_assignment_no_alias, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op >(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49, inlined from ‘Eigen::internal::call_assignment, Eigen::CwiseNullaryOp, Eigen::Matrix >, Eigen::internal::mul_assign_op >(Eigen::Matrix&, Eigen::CwiseNullaryOp, Eigen::Matrix > const&, Eigen::internal::mul_assign_op const&, Eigen::internal::enable_if, Eigen::Matrix >, Eigen::internal::evaluator_traits, Eigen::Matrix > >::Shape>::value, void*>::type)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27, inlined from ‘Eigen::DenseBase >::operator*=(double const&)’ at /usr/include/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h:20:28, inlined from ‘Avogadro::QuantumIO::NWChemJson::read(std::basic_istream >&, Avogadro::Core::Molecule&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp:138:21: /usr/include/eigen3/Eigen/src/Core/functors/AssignmentFunctors.h:92:102: warning: ‘MEM [(struct DenseStorage *)&position + 16B]’ may be used uninitialized [-Wmaybe-uninitialized] 92 | EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(DstScalar& a, const SrcScalar& b) const { a *= b; } | ~~^~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp: In member function ‘Avogadro::QuantumIO::NWChemJson::read(std::basic_istream >&, Avogadro::Core::Molecule&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp:133:15: note: ‘MEM [(struct DenseStorage *)&position + 16B]’ was declared here 133 | Vector3 position; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/customelementdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/customelementdialog.cpp.o -MF CMakeFiles/QtGui.dir/customelementdialog.cpp.o.d -o CMakeFiles/QtGui.dir/customelementdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/elementdetail_p.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/elementdetail_p.cpp.o -MF CMakeFiles/QtGui.dir/elementdetail_p.cpp.o.d -o CMakeFiles/QtGui.dir/elementdetail_p.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementdetail_p.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 26%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o -MF CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o.d -o CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/elementitem_p.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/elementitem_p.cpp.o -MF CMakeFiles/QtGui.dir/elementitem_p.cpp.o.d -o CMakeFiles/QtGui.dir/elementitem_p.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementitem_p.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/elementtranslator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/elementtranslator.cpp.o -MF CMakeFiles/QtGui.dir/elementtranslator.cpp.o.d -o CMakeFiles/QtGui.dir/elementtranslator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementtranslator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/extensionplugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/extensionplugin.cpp.o -MF CMakeFiles/QtGui.dir/extensionplugin.cpp.o.d -o CMakeFiles/QtGui.dir/extensionplugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o -MF CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o.d -o CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/fileformatdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/fileformatdialog.cpp.o -MF CMakeFiles/QtGui.dir/fileformatdialog.cpp.o.d -o CMakeFiles/QtGui.dir/fileformatdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 28%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/generichighlighter.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/generichighlighter.cpp.o -MF CMakeFiles/QtGui.dir/generichighlighter.cpp.o.d -o CMakeFiles/QtGui.dir/generichighlighter.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Building CXX object avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o -MF CMakeFiles/QuantumIO.dir/orca.cpp.o.d -o CMakeFiles/QuantumIO.dir/orca.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp: In member function ‘void Avogadro::QuantumIO::ORCAOutput::processLine(std::istream&, Avogadro::Core::GaussianSet*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:651:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 651 | while (idx < orcaOrbitals.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:654:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 654 | if (idx + 1 >= columns[i].size()) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:660:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 660 | if (idx + 1 >= columns[i].size()) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:730:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 730 | while (idx < orcaOrbitals.size()) { | ~~~~^~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:733:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 733 | if (idx + 1 >= columns[i].size()) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:739:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector::size_type’ {aka ‘long unsigned int’} [-Wsign-compare] 739 | if (idx + 1 >= columns[i].size()) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:118:9: warning: variable ‘vibScaling’ set but not used [-Wunused-but-set-variable] 118 | float vibScaling = 1.0f; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:398:39: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 398 | m_vibDisplacements[i].resize(m_atomNums.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:174:8: note: by argument 3 of type ‘const struct ValueType &’ to ‘Avogadro::Core::Array >::resize(unsigned long const&, Eigen::Matrix const&)’ declared here 174 | void resize(const size_t& sz, const ValueType& t = ValueType()) | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:398:39: note: ‘’ declared here 398 | m_vibDisplacements[i].resize(m_atomNums.size()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:400:44: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 400 | m_vibDisplacements[i].push_back(Eigen::Vector3d()); | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:247:8: note: by argument 2 of type ‘const struct ValueType &’ to ‘Avogadro::Core::Array >::push_back(Eigen::Matrix const&)’ declared here 247 | void push_back(const ValueType& v) | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:400:61: note: ‘’ declared here 400 | m_vibDisplacements[i].push_back(Eigen::Vector3d()); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 28%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/hydrogentools.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/hydrogentools.cpp.o -MF CMakeFiles/QtGui.dir/hydrogentools.cpp.o.d -o CMakeFiles/QtGui.dir/hydrogentools.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/interfacescript.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/interfacescript.cpp.o -MF CMakeFiles/QtGui.dir/interfacescript.cpp.o.d -o CMakeFiles/QtGui.dir/interfacescript.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/interfacewidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/interfacewidget.cpp.o -MF CMakeFiles/QtGui.dir/interfacewidget.cpp.o.d -o CMakeFiles/QtGui.dir/interfacewidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 29%] Linking CXX shared library ../../lib/libAvogadroQuantumIO.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuantumIO.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroQuantumIO.so.1 -o ../../lib/libAvogadroQuantumIO.so.1.98.1 CMakeFiles/QuantumIO.dir/gamessus.cpp.o CMakeFiles/QuantumIO.dir/gaussianfchk.cpp.o CMakeFiles/QuantumIO.dir/gaussiancube.cpp.o CMakeFiles/QuantumIO.dir/genericoutput.cpp.o CMakeFiles/QuantumIO.dir/molden.cpp.o CMakeFiles/QuantumIO.dir/mopacaux.cpp.o CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o CMakeFiles/QuantumIO.dir/nwchemlog.cpp.o CMakeFiles/QuantumIO.dir/orca.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQuantumIO.so.1.98.1 ../../lib/libAvogadroQuantumIO.so.1 ../../lib/libAvogadroQuantumIO.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 29%] Built target QuantumIO make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/qube.dir/build.make avogadro/command/CMakeFiles/qube.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/qube.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/qube.dir/build.make avogadro/command/CMakeFiles/qube.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 30%] Building CXX object avogadro/command/CMakeFiles/qube.dir/qube.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command && /usr/bin/g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -std=c++17 -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/command/CMakeFiles/qube.dir/qube.cpp.o -MF CMakeFiles/qube.dir/qube.cpp.o.d -o CMakeFiles/qube.dir/qube.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command/qube.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 30%] Linking CXX executable ../../bin/qube cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command && /usr/bin/cmake -E cmake_link_script CMakeFiles/qube.dir/link.txt --verbose=1 /usr/bin/g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes CMakeFiles/qube.dir/qube.cpp.o -o ../../bin/qube -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib ../../lib/libAvogadroQuantumIO.so.1.98.1 ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 30%] Built target qube make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 29%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/jsonwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/jsonwidget.cpp.o -MF CMakeFiles/QtGui.dir/jsonwidget.cpp.o.d -o CMakeFiles/QtGui.dir/jsonwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 30%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/layermodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/layermodel.cpp.o -MF CMakeFiles/QtGui.dir/layermodel.cpp.o.d -o CMakeFiles/QtGui.dir/layermodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 31%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/rwlayermanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/rwlayermanager.cpp.o -MF CMakeFiles/QtGui.dir/rwlayermanager.cpp.o.d -o CMakeFiles/QtGui.dir/rwlayermanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 31%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/meshgenerator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/meshgenerator.cpp.o -MF CMakeFiles/QtGui.dir/meshgenerator.cpp.o.d -o CMakeFiles/QtGui.dir/meshgenerator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 31%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/moleculemodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/moleculemodel.cpp.o -MF CMakeFiles/QtGui.dir/moleculemodel.cpp.o.d -o CMakeFiles/QtGui.dir/moleculemodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 31%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/molecule.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/molecule.cpp.o -MF CMakeFiles/QtGui.dir/molecule.cpp.o.d -o CMakeFiles/QtGui.dir/molecule.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 31%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/multiviewwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/multiviewwidget.cpp.o -MF CMakeFiles/QtGui.dir/multiviewwidget.cpp.o.d -o CMakeFiles/QtGui.dir/multiviewwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 31%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o -MF CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o.d -o CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/periodictableview.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/periodictableview.cpp.o -MF CMakeFiles/QtGui.dir/periodictableview.cpp.o.d -o CMakeFiles/QtGui.dir/periodictableview.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o -MF CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o.d -o CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/pythonscript.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/pythonscript.cpp.o -MF CMakeFiles/QtGui.dir/pythonscript.cpp.o.d -o CMakeFiles/QtGui.dir/pythonscript.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/sceneplugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/sceneplugin.cpp.o -MF CMakeFiles/QtGui.dir/sceneplugin.cpp.o.d -o CMakeFiles/QtGui.dir/sceneplugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o -MF CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o.d -o CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/scriptloader.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/scriptloader.cpp.o -MF CMakeFiles/QtGui.dir/scriptloader.cpp.o.d -o CMakeFiles/QtGui.dir/scriptloader.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/toolplugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/toolplugin.cpp.o -MF CMakeFiles/QtGui.dir/toolplugin.cpp.o.d -o CMakeFiles/QtGui.dir/toolplugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 32%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/rwmolecule.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto 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avogadro/qtgui/CMakeFiles/QtGui.dir/viewfactory.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/viewfactory.cpp.o -MF CMakeFiles/QtGui.dir/viewfactory.cpp.o.d -o CMakeFiles/QtGui.dir/viewfactory.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/viewfactory.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Building CXX object avogadro/qtgui/CMakeFiles/QtGui.dir/utilities.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto 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avogadro/qtgui/CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -MF CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o.d -o CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/qrc_qtgui.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Linking CXX shared library ../../lib/libAvogadroQtGui.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtGui.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroQtGui.so.1 -o ../../lib/libAvogadroQtGui.so.1.98.1 CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o CMakeFiles/QtGui.dir/colorbutton.cpp.o CMakeFiles/QtGui.dir/containerwidget.cpp.o CMakeFiles/QtGui.dir/customelementdialog.cpp.o CMakeFiles/QtGui.dir/elementdetail_p.cpp.o CMakeFiles/QtGui.dir/elementitem_p.cpp.o CMakeFiles/QtGui.dir/elementtranslator.cpp.o CMakeFiles/QtGui.dir/extensionplugin.cpp.o CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o CMakeFiles/QtGui.dir/fileformatdialog.cpp.o CMakeFiles/QtGui.dir/generichighlighter.cpp.o CMakeFiles/QtGui.dir/hydrogentools.cpp.o CMakeFiles/QtGui.dir/interfacescript.cpp.o CMakeFiles/QtGui.dir/interfacewidget.cpp.o CMakeFiles/QtGui.dir/jsonwidget.cpp.o CMakeFiles/QtGui.dir/layermodel.cpp.o CMakeFiles/QtGui.dir/rwlayermanager.cpp.o CMakeFiles/QtGui.dir/meshgenerator.cpp.o CMakeFiles/QtGui.dir/molecule.cpp.o CMakeFiles/QtGui.dir/moleculemodel.cpp.o CMakeFiles/QtGui.dir/multiviewwidget.cpp.o CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o CMakeFiles/QtGui.dir/periodictableview.cpp.o CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o CMakeFiles/QtGui.dir/pythonscript.cpp.o CMakeFiles/QtGui.dir/rwmolecule.cpp.o CMakeFiles/QtGui.dir/sceneplugin.cpp.o CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o CMakeFiles/QtGui.dir/scriptloader.cpp.o CMakeFiles/QtGui.dir/toolplugin.cpp.o CMakeFiles/QtGui.dir/utilities.cpp.o CMakeFiles/QtGui.dir/viewfactory.cpp.o CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroQtGui.so.1 ../../lib/libAvogadroQtGui.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Built target QtGui make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/depend /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Automatic MOC for target QtOpenGL cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtopengl/activeobjects.h" AutoGen: Parsing "SRC:/avogadro/qtopengl/glwidget.h" AutoGen: Parsing "SRC:/avogadro/qtopengl/qttextrenderstrategy.h" AutoGen: Parsing "SRC:/build/avogadro/qtopengl/avogadroqtopenglexport.h" AutoGen: Parsing "SRC:/avogadro/qtopengl/activeobjects.cpp" AutoGen: Parsing "SRC:/avogadro/qtopengl/glwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtopengl/qttextrenderstrategy.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp", because it doesn't exist, from "SRC:/avogadro/qtopengl/activeobjects.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtopengl/glwidget.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Built target QtOpenGL_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Automatic MOC for target QTAIMScenePlugin cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimengine.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimengine.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/EWIEGA46WW/moc_qtaimengine.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/qtaim/qtaimengine.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/EWIEGA46WW/moc_qtaimengine.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimengine.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/EWIEGA46WW/moc_qtaimengine.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include/QTAIMScenePluginPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include/QTAIMScenePluginPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include/QTAIMScenePluginPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Built target QTAIMScenePlugin_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Automatic MOC for target ThreeDMol cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmol.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmol.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/3dmol/3dmol.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmol.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmoldialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Built target ThreeDMol_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target ApplyColors cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/applycolors/applycolors.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/applycolors/applycolors.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/applycolors/applycolors.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors/applycolors.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target ApplyColors_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Automatic MOC for target MoleQueue cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/molequeue/batchjob.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/client.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jobobject.h" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jsonrpcclient.h" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgenerator.h" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratordialog.h" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratorwidget.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuedialog.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuemanager.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuequeuelistmodel.h" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuewidget.h" AutoGen: Parsing "SRC:/build/avogadro/molequeue/avogadromolequeueexport.h" AutoGen: Parsing "SRC:/avogadro/molequeue/batchjob.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/client/client.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jobobject.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/client/jsonrpcclient.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgenerator.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratordialog.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratorwidget.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuedialog.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuemanager.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuequeuelistmodel.cpp" AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuewidget.cpp" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/batchjob.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/client/client.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/client/jsonrpcclient.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgenerator.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgeneratordialog.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgeneratorwidget.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuedialog.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuemanager.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuequeuelistmodel.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuewidget.h" /usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/molequeue/MoleQueue_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target MoleQueue_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Bonding cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/bonding/bonding.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/bonding/bonding.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/bonding/BondingPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/bonding/bonding.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding/bonding.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/bonding/BondingPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/BondingPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Bonding_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Cartoons cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/cartoons/cartoons.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cartoons/cartoons.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cartoons/cartoons.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons/cartoons.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Cartoons_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target CopyPaste cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/copypaste/copypaste.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/copypaste/copypaste.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/copypaste/copypaste.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste/copypaste.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target CopyPaste_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Centroid cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/centroid/centroid.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/centroid/centroid.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/centroid/centroid.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid/centroid.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Centroid_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target CrystalScene cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystalscene.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystalscene.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/crystalscene.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target CrystalScene_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target CustomElements cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/customelements/customelements.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/customelements/customelements.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/customelements/customelements.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements/customelements.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target CustomElements_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Crystal cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystal.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/supercelldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/unitcelldialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystal.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/supercelldialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/unitcelldialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/crystal.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystal.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/importcrystaldialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/supercelldialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/supercelldialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/unitcelldialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/unitcelldialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/volumescalingdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Crystal_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target FetchPDB cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb/fetchpdb.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target FetchPDB_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Hydrogens cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/hydrogens/hydrogens.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/hydrogens/hydrogens.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/hydrogens/hydrogens.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens/hydrogens.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Hydrogens_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Forcefield cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefield.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/obmmenergy.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/scriptenergy.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefield.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/scriptenergy.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/forcefield.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefielddialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Forcefield_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target NucleicInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/insertdna/insertdna.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertdna/insertdna.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertdna/insertdna.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna/insertdna.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target NucleicInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target Label cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/Label_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/label/label.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/label/label.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/label/LabelPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/label/label.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/label.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/label/LabelPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/label/Label_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target Label_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target ImportPQR cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/importpqr.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrrequest.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/importpqr.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrrequest.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrwidget.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/importpqr.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/importpqr.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/pqrrequest.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrrequest.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/pqrwidget.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target ImportPQR_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target NetworkDatabases cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases/networkdatabases.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target NetworkDatabases_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target LineFormatInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinput.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target LineFormatInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 35%] Automatic MOC for target PLY cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/ply/ply.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/ply/ply.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/ply/PLYPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/ply/ply.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply/ply.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/ply/PLYPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLYPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 35%] Built target PLY_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 35%] Automatic MOC for target POVRay cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/povray/povray.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/povray/povray.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/povray/POVRayPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/povray/povray.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray/povray.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/povray/POVRayPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRayPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 35%] Built target POVRay_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 35%] Automatic MOC for target OpenBabel cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obcharges.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obfileformat.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obprocess.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/openbabel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obcharges.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obfileformat.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obprocess.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/openbabel.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obforcefielddialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obprocess.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obprocess.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/openbabel.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/openbabel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obcharges.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obfileformat.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obfileformat.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target OpenBabel_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target PropertyTables cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertymodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertytables.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertyview.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertymodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertytables.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertyview.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertymodel.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertymodel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertytables.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertytables.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertyview.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target PropertyTables_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target Select cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/select/Select_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/select/select.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/select/select.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/select/SelectPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/select/select.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select/select.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/select/SelectPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/SelectPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/select/Select_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target Select_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target SpaceGroup cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/spacegroup/spacegroup.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/spacegroup/spacegroup.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spacegroup/spacegroup.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup/spacegroup.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target SpaceGroup_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target OpenMMInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openmminput/openmminput.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminput.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminputdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target OpenMMInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target LammpsInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinput.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target LammpsInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target InsertFragment cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragment.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragmentdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragment.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragmentdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/insertfragment.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/insertfragmentdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragmentdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target InsertFragment_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target CoordinateEditor cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditor.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target CoordinateEditor_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target MolecularProperties cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularproperties.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target MolecularProperties_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target VRML cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/vrml/vrml.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vrml/vrml.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vrml/vrml.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml/vrml.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target VRML_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target Spectra cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/spectra.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationmodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/spectra.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationmodel.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_spectra.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spectra/spectra.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_spectra.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/spectra.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_spectra.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_vibrationdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spectra/vibrationdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_vibrationdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_vibrationdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/include/SpectraPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include/SpectraPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/include/SpectraPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target Spectra_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target commands cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/commandscripts/command.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/commandscripts/command.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/commandscripts/command.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts/command.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target commands_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target ScriptCharges cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptchargemodel.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptcharges.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Built target ScriptCharges_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 36%] Automatic MOC for target ScriptFileFormats cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/fileformatscript.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats/scriptfileformats.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target ScriptFileFormats_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Automatic MOC for target PluginDownloader cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/zipextracter.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/zipextracter.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/downloaderwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/plugindownloader.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target PluginDownloader_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Automatic MOC for target BallStick cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/ballandstick/ballandstick.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/ballandstick/ballandstick.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/ballandstick/ballandstick.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick/ballandstick.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target BallStick_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Automatic MOC for target Force cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/force/Force_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/force/force.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/force/force.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/force/ForcePlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/force/force.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force/force.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/force/ForcePlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/ForcePlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/force/Force_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target Force_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Automatic MOC for target CloseContacts cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/closecontacts/closecontacts.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/closecontacts/closecontacts.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/closecontacts/closecontacts.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts/closecontacts.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target CloseContacts_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Automatic MOC for target Licorice cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/licorice/licorice.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/licorice/licorice.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/licorice/licorice.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice/licorice.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target Licorice_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Automatic MOC for target Meshes cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/meshes/meshes.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/meshes/meshes.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/meshes/meshes.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target Meshes_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Automatic MOC for target NonCovalent cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/noncovalent/noncovalent.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/noncovalent/noncovalent.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/noncovalent/noncovalent.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent/noncovalent.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target NonCovalent_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Automatic MOC for target VanDerWaals cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals/vanderwaals.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target VanDerWaals_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Automatic MOC for target Wireframe cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/wireframe/wireframe.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/wireframe/wireframe.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/wireframe/wireframe.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe/wireframe.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 39%] Built target Wireframe_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 39%] Automatic MOC for target QTAIMExtension cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtConcurrent -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcriticalpointlocator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcubature.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimextension.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimmathutilities.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimodeintegrator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunction.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcriticalpointlocator.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcubature.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimextension.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimmathutilities.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunction.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/EWIEGA46WW/moc_qtaimextension.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/qtaim/qtaimextension.h" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtConcurrent -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/EWIEGA46WW/moc_qtaimextension.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimextension.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/EWIEGA46WW/moc_qtaimextension.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include/QTAIMExtensionPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtConcurrent -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include/QTAIMExtensionPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include/QTAIMExtensionPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Built target QTAIMExtension_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Generating ui_molequeuewidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_molequeuewidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Generating ui_inputgeneratordialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_inputgeneratordialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Generating ui_inputgeneratorwidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_inputgeneratorwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Generating ui_molequeuedialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_molequeuedialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/batchjob.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/batchjob.cpp.o -MF CMakeFiles/MoleQueue.dir/batchjob.cpp.o.d -o CMakeFiles/MoleQueue.dir/batchjob.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o -MF CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o.d -o CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/glwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/glwidget.cpp.o -MF CMakeFiles/QtOpenGL.dir/glwidget.cpp.o.d -o CMakeFiles/QtOpenGL.dir/glwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o -MF CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o.d -o CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/qttextrenderstrategy.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Linking CXX shared library ../../lib/libAvogadroQtOpenGL.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtOpenGL.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroQtOpenGL.so.1 -o ../../lib/libAvogadroQtOpenGL.so.1.98.1 CMakeFiles/QtOpenGL.dir/QtOpenGL_autogen/mocs_compilation.cpp.o CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o CMakeFiles/QtOpenGL.dir/glwidget.cpp.o CMakeFiles/QtOpenGL.dir/qttextrenderstrategy.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroRendering.so.1.98.1 ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtOpenGL.so.1.98.1 ../../lib/libAvogadroQtOpenGL.so.1 ../../lib/libAvogadroQtOpenGL.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target QtOpenGL make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePlugin_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePlugin_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePlugin_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePlugin_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/qtaimengine.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/qtaimengine.cpp.o -MF CMakeFiles/QTAIMScenePlugin.dir/qtaimengine.cpp.o.d -o CMakeFiles/QTAIMScenePlugin.dir/qtaimengine.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimengine.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePluginPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePluginPlugin.cpp.o -MF CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePluginPlugin.cpp.o.d -o CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePluginPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Linking CXX static library ../../../lib/avogadro2/staticplugins/QTAIMScenePlugin.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -P CMakeFiles/QTAIMScenePlugin.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_link_script CMakeFiles/QTAIMScenePlugin.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/QTAIMScenePlugin.a CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePlugin_autogen/mocs_compilation.cpp.o CMakeFiles/QTAIMScenePlugin.dir/qtaimengine.cpp.o CMakeFiles/QTAIMScenePlugin.dir/QTAIMScenePluginPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/QTAIMScenePlugin.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target QTAIMScenePlugin make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Generating ui_3dmoldialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ui_3dmoldialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmoldialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -MF CMakeFiles/ThreeDMol.dir/3dmol.cpp.o.d -o CMakeFiles/ThreeDMol.dir/3dmol.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmol.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -MF CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o.d -o CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmoldialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/client.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/client.cpp.o -MF CMakeFiles/MoleQueue.dir/client/client.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/client.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -MF CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o.d -o CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ThreeDMol.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -P CMakeFiles/ThreeDMol.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_link_script CMakeFiles/ThreeDMol.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ThreeDMol.a CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o CMakeFiles/ThreeDMol.dir/3dmol.cpp.o CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ThreeDMol.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Built target ThreeDMol make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Generating ui_chargedialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ui_chargedialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors/chargedialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o -MF CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jobobject.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -MF CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/applycolors.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/applycolors.cpp.o -MF CMakeFiles/ApplyColors.dir/applycolors.cpp.o.d -o CMakeFiles/ApplyColors.dir/applycolors.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors/applycolors.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o -MF CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o.d -o CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Linking CXX shared library ../../lib/libAvogadroMoleQueue.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_link_script CMakeFiles/MoleQueue.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroMoleQueue.so.1 -o ../../lib/libAvogadroMoleQueue.so.1.98.1 CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o CMakeFiles/MoleQueue.dir/batchjob.cpp.o CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o CMakeFiles/MoleQueue.dir/client/client.cpp.o CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroMoleQueue.so.1.98.1 ../../lib/libAvogadroMoleQueue.so.1 ../../lib/libAvogadroMoleQueue.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ApplyColors.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -P CMakeFiles/ApplyColors.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_link_script CMakeFiles/ApplyColors.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ApplyColors.a CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o CMakeFiles/ApplyColors.dir/applycolors.cpp.o CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ApplyColors.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Built target MoleQueue make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/depend make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Built target ApplyColors make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 45%] Automatic MOC for target AlignTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/aligntool/aligntool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/aligntool/aligntool.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/aligntool/aligntool.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Built target AlignTool_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Generating ui_bondingdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/ui_bondingdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding/bondingdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Automatic MOC for target BondCentric cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Built target BondCentric_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Building CXX object avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Building CXX object avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/BondingPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/BondingPlugin.cpp.o -MF CMakeFiles/Bonding.dir/BondingPlugin.cpp.o.d -o CMakeFiles/Bonding.dir/BondingPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/BondingPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Building CXX object avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/bonding.cpp.o -MF CMakeFiles/Bonding.dir/bonding.cpp.o.d -o CMakeFiles/Bonding.dir/bonding.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding/bonding.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Bonding.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/cmake -P CMakeFiles/Bonding.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_link_script CMakeFiles/Bonding.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Bonding.a CMakeFiles/Bonding.dir/Bonding_autogen/mocs_compilation.cpp.o CMakeFiles/Bonding.dir/bonding.cpp.o CMakeFiles/Bonding.dir/BondingPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Bonding.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Built target Bonding make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Building CXX object avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Building CXX object avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Building CXX object avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/centroid.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/centroid.cpp.o -MF CMakeFiles/Centroid.dir/centroid.cpp.o.d -o CMakeFiles/Centroid.dir/centroid.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid/centroid.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Building CXX object avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o -MF CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o.d -o CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Centroid.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -P CMakeFiles/Centroid.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_link_script CMakeFiles/Centroid.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Centroid.a CMakeFiles/Centroid.dir/Centroid_autogen/mocs_compilation.cpp.o CMakeFiles/Centroid.dir/centroid.cpp.o CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Centroid.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Built target Centroid make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Building CXX object avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/cartoons.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/cartoons.cpp.o -MF CMakeFiles/Cartoons.dir/cartoons.cpp.o.d -o CMakeFiles/Cartoons.dir/cartoons.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons/cartoons.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Building CXX object avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o -MF CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o.d -o CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 48%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Cartoons.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -P CMakeFiles/Cartoons.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cartoons.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Cartoons.a CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o CMakeFiles/Cartoons.dir/cartoons.cpp.o CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Cartoons.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 48%] Built target Cartoons make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Generating ui_volumescalingdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/ui_volumescalingdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/volumescalingdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Generating ui_importcrystaldialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/ui_importcrystaldialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/importcrystaldialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Generating ui_supercelldialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/ui_supercelldialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/supercelldialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Generating ui_unitcelldialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/ui_unitcelldialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/unitcelldialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 48%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o -MF CMakeFiles/CopyPaste.dir/copypaste.cpp.o.d -o CMakeFiles/CopyPaste.dir/copypaste.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste/copypaste.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -MF CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o.d -o CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CopyPaste.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -P CMakeFiles/CopyPaste.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopyPaste.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CopyPaste.a CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o CMakeFiles/CopyPaste.dir/copypaste.cpp.o CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CopyPaste.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Built target CopyPaste make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/crystal.cpp.o -MF CMakeFiles/Crystal.dir/crystal.cpp.o.d -o CMakeFiles/Crystal.dir/crystal.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystal.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -MF CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o.d -o CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/importcrystaldialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/crystalscene.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/crystalscene.cpp.o -MF CMakeFiles/CrystalScene.dir/crystalscene.cpp.o.d -o CMakeFiles/CrystalScene.dir/crystalscene.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /usr/include/c++/13/vector:66, from /usr/include/c++/13/functional:64, from /usr/include/eigen3/Eigen/Core:85, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp:6: In member function ‘std::vector, std::allocator > >::resize(unsigned long, Eigen::Matrix const&)’, inlined from ‘Avogadro::Core::Array >::resize(unsigned long const&, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:177:19, inlined from ‘Avogadro::QtPlugins::CrystalScene::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp:79:17: /usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘’ may be used uninitialized [-Wmaybe-uninitialized] 1034 | _M_fill_insert(end(), __new_size - size(), __x); | ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ In file included from /usr/include/c++/13/vector:72: /usr/include/c++/13/bits/vector.tcc: In member function ‘Avogadro::QtPlugins::CrystalScene::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’: /usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector, std::allocator > >::_M_fill_insert(__gnu_cxx::__normal_iterator*, std::vector, std::allocator > > >, unsigned long, Eigen::Matrix const&)’ declared here 529 | vector<_Tp, _Alloc>:: | ^~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp:79:17: note: ‘’ declared here 79 | strip.resize(2); | ~~~~~~~~~~~~^~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/supercelldialog.cpp.o -MF CMakeFiles/Crystal.dir/supercelldialog.cpp.o.d -o CMakeFiles/Crystal.dir/supercelldialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/supercelldialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o -MF CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o.d -o CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CrystalScene.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -P CMakeFiles/CrystalScene.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_link_script CMakeFiles/CrystalScene.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CrystalScene.a CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o CMakeFiles/CrystalScene.dir/crystalscene.cpp.o CMakeFiles/CrystalScene.dir/CrystalScenePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CrystalScene.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Built target CrystalScene make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Building CXX object avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Building CXX object avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/customelements.cpp.o -MF CMakeFiles/CustomElements.dir/customelements.cpp.o.d -o CMakeFiles/CustomElements.dir/customelements.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements/customelements.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/unitcelldialog.cpp.o -MF CMakeFiles/Crystal.dir/unitcelldialog.cpp.o.d -o CMakeFiles/Crystal.dir/unitcelldialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/unitcelldialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Building CXX object avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o -MF CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o.d -o CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CustomElements.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/cmake -P CMakeFiles/CustomElements.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_link_script CMakeFiles/CustomElements.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CustomElements.a CMakeFiles/CustomElements.dir/CustomElements_autogen/mocs_compilation.cpp.o CMakeFiles/CustomElements.dir/customelements.cpp.o CMakeFiles/CustomElements.dir/CustomElementsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CustomElements.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Built target CustomElements make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 51%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -MF CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o.d -o CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/volumescalingdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Automatic MOC for target Editor cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editor.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editortoolwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editor.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editortoolwidget.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/editor/EditorPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/editor/editor.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editor.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/editor/editortoolwidget.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editortoolwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/editor/EditorPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/EditorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Built target Editor_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -MF CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o.d -o CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Crystal.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -P CMakeFiles/Crystal.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_link_script CMakeFiles/Crystal.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Crystal.a CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o CMakeFiles/Crystal.dir/crystal.cpp.o CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o CMakeFiles/Crystal.dir/supercelldialog.cpp.o CMakeFiles/Crystal.dir/unitcelldialog.cpp.o CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Crystal.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Built target Crystal make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o -MF CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Automatic MOC for target Focus cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/focus/focus.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/focus/focus.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/focus/FocusPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/focus/focus.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus/focus.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/focus/FocusPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/FocusPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Built target Focus_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Generating ui_forcefielddialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/ui_forcefielddialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefielddialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o -MF CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o.d -o CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb/fetchpdb.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o -MF CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o.d -o CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Linking CXX static library ../../../lib/avogadro2/staticplugins/FetchPDB.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -P CMakeFiles/FetchPDB.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/FetchPDB.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/FetchPDB.a CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/FetchPDB.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Built target FetchPDB make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/hydrogens.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/hydrogens.cpp.o -MF CMakeFiles/Hydrogens.dir/hydrogens.cpp.o.d -o CMakeFiles/Hydrogens.dir/hydrogens.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens/hydrogens.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefield.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefield.cpp.o -MF CMakeFiles/Forcefield.dir/forcefield.cpp.o.d -o CMakeFiles/Forcefield.dir/forcefield.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp: In member function ‘void Avogadro::QtPlugins::Forcefield::optimize()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 215 | for (Index i = 0; i < 3 * n; ++i) { | ~~^~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:267:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 267 | for (size_t i = 0; i < n; ++i) { | ~~^~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:265:12: warning: variable ‘isFinite’ set but not used [-Wunused-but-set-variable] 265 | bool isFinite = true; | ^~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp: In member function ‘void Avogadro::QtPlugins::Forcefield::freezeSelected()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:367:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 367 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp: In member function ‘void Avogadro::QtPlugins::Forcefield::unfreezeSelected()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:381:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 381 | for (Index i = 0; i < numAtoms; ++i) { | ~~^~~~~~~~~~ In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:22: /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/avogadropython.h: At global scope: /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/avogadropython.h:2:20: warning: ‘Avogadro::pythonInterpreterPath’ defined but not used [-Wunused-variable] 2 | static const char *pythonInterpreterPath = "/usr/bin/python3"; | ^~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o -MF CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o.d -o CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Hydrogens.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/cmake -P CMakeFiles/Hydrogens.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_link_script CMakeFiles/Hydrogens.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Hydrogens.a CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o CMakeFiles/Hydrogens.dir/hydrogens.cpp.o CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Hydrogens.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Built target Hydrogens make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Generating ui_pqrwidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ui_pqrwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrwidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o -MF CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o.d -o CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefielddialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/importpqr.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/importpqr.cpp.o -MF CMakeFiles/ImportPQR.dir/importpqr.cpp.o.d -o CMakeFiles/ImportPQR.dir/importpqr.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/importpqr.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/obmmenergy.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/obmmenergy.cpp.o -MF CMakeFiles/Forcefield.dir/obmmenergy.cpp.o.d -o CMakeFiles/Forcefield.dir/obmmenergy.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp: In constructor ‘Avogadro::QtPlugins::OBMMEnergy::ProcessListener::ProcessListener(QProcess*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:61:8: warning: ‘Avogadro::QtPlugins::OBMMEnergy::ProcessListener::m_finished’ will be initialized after [-Wreorder] 61 | bool m_finished; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:60:13: warning: ‘QProcess* Avogadro::QtPlugins::OBMMEnergy::ProcessListener::m_process’ [-Wreorder] 60 | QProcess* m_process; | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:23:3: warning: when initialized here [-Wreorder] 23 | ProcessListener(QProcess* proc) | ^~~~~~~~~~~~~~~ In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.h: In constructor ‘Avogadro::QtPlugins::OBMMEnergy::OBMMEnergy(const std::string&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.h:86:15: warning: ‘Avogadro::QtPlugins::OBMMEnergy::m_name’ will be initialized after [-Wreorder] 86 | std::string m_name; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.h:81:13: warning: ‘QProcess* Avogadro::QtPlugins::OBMMEnergy::m_process’ [-Wreorder] 81 | QProcess* m_process; | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:65:1: warning: when initialized here [-Wreorder] 65 | OBMMEnergy::OBMMEnergy(const std::string& method) | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp: In member function ‘virtual Avogadro::Real Avogadro::QtPlugins::OBMMEnergy::value(const Eigen::VectorXd&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:261:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase >::Index’ {aka ‘long int’} [-Wsign-compare] 261 | for (Index i = 0; i < x.size(); i += 3) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp: In member function ‘virtual void Avogadro::QtPlugins::OBMMEnergy::gradient(const Eigen::VectorXd&, Eigen::VectorXd&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:317:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase >::Index’ {aka ‘long int’} [-Wsign-compare] 317 | for (Index i = 0; i < x.size(); i += 3) { | ~~^~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o -MF CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o.d -o CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/scriptenergy.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/scriptenergy.cpp.o -MF CMakeFiles/Forcefield.dir/scriptenergy.cpp.o.d -o CMakeFiles/Forcefield.dir/scriptenergy.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.h: In constructor ‘Avogadro::QtPlugins::ScriptEnergy::ScriptEnergy(const QString&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.h:91:8: warning: ‘Avogadro::QtPlugins::ScriptEnergy::m_valid’ will be initialized after [-Wreorder] 91 | bool m_valid; | ^~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.h:86:10: warning: ‘Avogadro::QtPlugins::ScriptEnergy::Format Avogadro::QtPlugins::ScriptEnergy::m_inputFormat’ [-Wreorder] 86 | Format m_inputFormat; | ^~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:29:1: warning: when initialized here [-Wreorder] 29 | ScriptEnergy::ScriptEnergy(const QString& scriptFileName_) | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp: In member function ‘virtual Avogadro::Real Avogadro::QtPlugins::ScriptEnergy::value(const Eigen::VectorXd&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:116:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase >::Index’ {aka ‘long int’} [-Wsign-compare] 116 | for (Index i = 0; i < x.size(); i += 3) { | ~~^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp: In member function ‘virtual void Avogadro::QtPlugins::ScriptEnergy::gradient(const Eigen::VectorXd&, Eigen::VectorXd&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:149:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase >::Index’ {aka ‘long int’} [-Wsign-compare] 149 | for (Index i = 0; i < x.size(); i += 3) { | ~~^~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o -MF CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o.d -o CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Forcefield.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/cmake -P CMakeFiles/Forcefield.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_link_script CMakeFiles/Forcefield.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Forcefield.a CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o CMakeFiles/Forcefield.dir/forcefield.cpp.o CMakeFiles/Forcefield.dir/forcefielddialog.cpp.o CMakeFiles/Forcefield.dir/obmmenergy.cpp.o CMakeFiles/Forcefield.dir/scriptenergy.cpp.o CMakeFiles/Forcefield.dir/ForcefieldPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Forcefield.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Built target Forcefield make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Generating ui_insertdnadialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/ui_insertdnadialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna/insertdnadialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o -MF CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o.d -o CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrrequest.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o -MF CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o.d -o CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ImportPQR.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -P CMakeFiles/ImportPQR.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImportPQR.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ImportPQR.a CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o CMakeFiles/ImportPQR.dir/importpqr.cpp.o CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ImportPQR.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Built target ImportPQR make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 56%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/insertdna.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/insertdna.cpp.o -MF CMakeFiles/NucleicInput.dir/insertdna.cpp.o.d -o CMakeFiles/NucleicInput.dir/insertdna.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna/insertdna.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o -MF CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o.d -o CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NucleicInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -P CMakeFiles/NucleicInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NucleicInput.a CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o CMakeFiles/NucleicInput.dir/insertdna.cpp.o CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NucleicInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Built target NucleicInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/label.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/label.cpp.o -MF CMakeFiles/Label.dir/label.cpp.o.d -o CMakeFiles/Label.dir/label.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/label.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Automatic MOC for target LabelEditor cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/label/labeleditor.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/label/labeleditor.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/label/labeleditor.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/labeleditor.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Built target LabelEditor_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Generating ui_lineformatinputdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/ui_lineformatinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinputdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/LabelPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/LabelPlugin.cpp.o -MF CMakeFiles/Label.dir/LabelPlugin.cpp.o.d -o CMakeFiles/Label.dir/LabelPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Label.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -P CMakeFiles/Label.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_link_script CMakeFiles/Label.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Label.a CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o CMakeFiles/Label.dir/label.cpp.o CMakeFiles/Label.dir/LabelPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Label.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Built target Label make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Automatic MOC for target Manipulator cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/manipulator/manipulator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/manipulator/manipulator.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/manipulator/manipulator.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulator.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Built target Manipulator_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 59%] Automatic MOC for target MeasureTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/measuretool/measuretool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/measuretool/measuretool.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/measuretool/measuretool.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 59%] Built target MeasureTool_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 59%] Automatic MOC for target Navigator cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/navigator/navigator.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/navigator/navigator.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/navigator/navigator.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator/navigator.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 59%] Built target Navigator_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 60%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o -MF CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o.d -o CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o -MF CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o.d -o CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinputdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 60%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o -MF CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases/networkdatabases.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o -MF CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o.d -o CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Linking CXX static library ../../../lib/avogadro2/staticplugins/LineFormatInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -P CMakeFiles/LineFormatInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineFormatInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LineFormatInput.a CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LineFormatInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Built target LineFormatInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Generating ui_obforcefielddialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/ui_obforcefielddialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obforcefielddialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o -MF CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NetworkDatabases.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -P CMakeFiles/NetworkDatabases.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_link_script CMakeFiles/NetworkDatabases.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NetworkDatabases.a CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NetworkDatabases.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Built target NetworkDatabases make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Automatic MOC for target PlayerTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/playertool/playertool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/playertool/playertool.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/playertool/playertool.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool/playertool.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Built target PlayerTool_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obcharges.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obcharges.cpp.o -MF CMakeFiles/OpenBabel.dir/obcharges.cpp.o.d -o CMakeFiles/OpenBabel.dir/obcharges.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.h: In constructor ‘Avogadro::QtPlugins::OBCharges::OBCharges(const std::string&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.h:65:15: warning: ‘Avogadro::QtPlugins::OBCharges::m_identifier’ will be initialized after [-Wreorder] 65 | std::string m_identifier; | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp:65:77: warning: base ‘Avogadro::Calc::ChargeModel’ [-Wreorder] 65 | OBCharges::OBCharges(const std::string& id) : m_identifier(id), ChargeModel() | ^ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp:65:1: warning: when initialized here [-Wreorder] 65 | OBCharges::OBCharges(const std::string& id) : m_identifier(id), ChargeModel() | ^~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/ply.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG 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-I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLYPlugin.cpp.o -MF CMakeFiles/PLY.dir/PLYPlugin.cpp.o.d -o CMakeFiles/PLY.dir/PLYPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLYPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PLY.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/cmake -P CMakeFiles/PLY.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_link_script CMakeFiles/PLY.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PLY.a CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o CMakeFiles/PLY.dir/ply.cpp.o CMakeFiles/PLY.dir/PLYPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PLY.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Built target PLY make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Building CXX object avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o -MF CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/povray.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/povray.cpp.o -MF CMakeFiles/POVRay.dir/povray.cpp.o.d -o CMakeFiles/POVRay.dir/povray.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray/povray.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obfileformat.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obfileformat.cpp.o -MF CMakeFiles/OpenBabel.dir/obfileformat.cpp.o.d -o CMakeFiles/OpenBabel.dir/obfileformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obfileformat.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o -MF CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o.d -o CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRayPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Linking CXX static library ../../../lib/avogadro2/staticplugins/POVRay.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/cmake -P CMakeFiles/POVRay.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_link_script CMakeFiles/POVRay.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/POVRay.a CMakeFiles/POVRay.dir/POVRay_autogen/mocs_compilation.cpp.o CMakeFiles/POVRay.dir/povray.cpp.o CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/POVRay.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Built target POVRay make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o -MF CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o.d -o CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obforcefielddialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obprocess.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obprocess.cpp.o -MF CMakeFiles/OpenBabel.dir/obprocess.cpp.o.d -o CMakeFiles/OpenBabel.dir/obprocess.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obprocess.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertytables.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertytables.cpp.o -MF CMakeFiles/PropertyTables.dir/propertytables.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertytables.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertytables.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/openbabel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/openbabel.cpp.o -MF CMakeFiles/OpenBabel.dir/openbabel.cpp.o.d -o CMakeFiles/OpenBabel.dir/openbabel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/openbabel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o -MF CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o.d -o CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OpenBabel.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -P CMakeFiles/OpenBabel.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenBabel.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OpenBabel.a CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o CMakeFiles/OpenBabel.dir/obcharges.cpp.o CMakeFiles/OpenBabel.dir/obfileformat.cpp.o CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o CMakeFiles/OpenBabel.dir/obprocess.cpp.o CMakeFiles/OpenBabel.dir/openbabel.cpp.o CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OpenBabel.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Built target OpenBabel make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Automatic MOC for target ResetView cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/resetview/resetview.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/resetview/resetview.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/resetview/ResetViewPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/resetview/resetview.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview/resetview.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/resetview/ResetViewPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetViewPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Built target ResetView_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertymodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertymodel.cpp.o -MF CMakeFiles/PropertyTables.dir/propertymodel.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertymodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertymodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertyview.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertyview.cpp.o -MF CMakeFiles/PropertyTables.dir/propertyview.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertyview.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h: In constructor ‘Avogadro::PropertyView::PropertyView(Avogadro::PropertyType, QWidget*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h:35:20: warning: ‘Avogadro::PropertyView::m_molecule’ will be initialized after [-Wreorder] 35 | QtGui::Molecule* m_molecule; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h:34:16: warning: ‘Avogadro::PropertyType Avogadro::PropertyView::m_type’ [-Wreorder] 34 | PropertyType m_type; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:25:1: warning: when initialized here [-Wreorder] 25 | PropertyView::PropertyView(PropertyType type, QWidget* parent) | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp: In member function ‘virtual void Avogadro::PropertyView::selectionChanged(const QItemSelection&, const QItemSelection&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:100:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘Avogadro::Index’ {aka ‘long unsigned int’} [-Wsign-compare] 100 | if (rowNum >= m_molecule->atomCount()) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:105:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘Avogadro::Index’ {aka ‘long unsigned int’} [-Wsign-compare] 105 | if (rowNum >= m_molecule->bondCount()) | ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o -MF CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o.d -o CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PropertyTables.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -P CMakeFiles/PropertyTables.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyTables.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PropertyTables.a CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyTables.dir/propertytables.cpp.o CMakeFiles/PropertyTables.dir/propertymodel.cpp.o CMakeFiles/PropertyTables.dir/propertyview.cpp.o CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PropertyTables.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Built target PropertyTables make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/select.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/select.cpp.o -MF CMakeFiles/Select.dir/select.cpp.o.d -o CMakeFiles/Select.dir/select.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select/select.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Automatic MOC for target Selection cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontool.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/selectiontool/selectiontool.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 64%] Built target Selection_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 64%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 64%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/SelectPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/SelectPlugin.cpp.o -MF CMakeFiles/Select.dir/SelectPlugin.cpp.o.d -o CMakeFiles/Select.dir/SelectPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/SelectPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Select.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -P CMakeFiles/Select.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_link_script CMakeFiles/Select.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Select.a CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o CMakeFiles/Select.dir/select.cpp.o CMakeFiles/Select.dir/SelectPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Select.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Built target Select make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Automatic MOC for target Surfaces cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfacedialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfaces.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfacedialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfaces.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.h" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/slatersetconcurrent.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/surfacedialog.h" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfacedialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/surfaces.h" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Built target Surfaces_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Generating ui_lammpsinputdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/ui_lammpsinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui: Warning: Tab-stop assignment: 'moreButton' is not a valid widget. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui: Warning: Tab-stop assignment: 'previewText' is not a valid widget. make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o -MF CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o.d -o CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup/spacegroup.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o -MF CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o.d -o CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Linking CXX static library ../../../lib/avogadro2/staticplugins/SpaceGroup.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -P CMakeFiles/SpaceGroup.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpaceGroup.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/SpaceGroup.a CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/SpaceGroup.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Built target SpaceGroup make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Generating ui_openmminputdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/ui_openmminputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminputdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o -MF CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o.d -o CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o -MF CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o.d -o CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o -MF CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o.d -o CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminputdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o -MF CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o.d -o CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Linking CXX static library ../../../lib/avogadro2/staticplugins/LammpsInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -P CMakeFiles/LammpsInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/LammpsInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LammpsInput.a CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LammpsInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Built target LammpsInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Generating ui_coordinateeditordialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/ui_coordinateeditordialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminput.cpp.o -MF CMakeFiles/OpenMMInput.dir/openmminput.cpp.o.d -o CMakeFiles/OpenMMInput.dir/openmminput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o -MF CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o.d -o CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OpenMMInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/cmake -P CMakeFiles/OpenMMInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_link_script CMakeFiles/OpenMMInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OpenMMInput.a CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o CMakeFiles/OpenMMInput.dir/openmminput.cpp.o CMakeFiles/OpenMMInput.dir/OpenMMInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OpenMMInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Built target OpenMMInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Generating ui_insertfragmentdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/ui_insertfragmentdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragmentdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o -MF CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 67%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp: In member function ‘void Avogadro::QtPlugins::CoordinateEditorDialog::validateInputWorker()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:413:15: warning: unused variable ‘index’ [-Wunused-variable] 413 | int index = tokenCursor.selectedText().toInt(&isInt); | ^~~~~ In member function ‘__ct ’, inlined from ‘QVector<(anonymous namespace)::AtomStruct>::append((anonymous namespace)::AtomStruct const&)’ at /usr/include/qt5/QtCore/qvector.h:793:13, inlined from ‘QVector<(anonymous namespace)::AtomStruct>::operator<<((anonymous namespace)::AtomStruct const&)’ at /usr/include/qt5/QtCore/qvector.h:293:13, inlined from ‘Avogadro::QtPlugins::CoordinateEditorDialog::validateInputWorker()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:509:28: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:93:8: warning: ‘atom.atomicNumber’ may be used uninitialized [-Wmaybe-uninitialized] 93 | struct AtomStruct | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp: In member function ‘Avogadro::QtPlugins::CoordinateEditorDialog::validateInputWorker()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:341:16: note: ‘atom.atomicNumber’ was declared here 341 | AtomStruct atom; | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragment.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragment.cpp.o -MF CMakeFiles/InsertFragment.dir/insertfragment.cpp.o.d -o CMakeFiles/InsertFragment.dir/insertfragment.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h: In constructor ‘Avogadro::QtPlugins::InsertFragment::InsertFragment(QObject*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:50:25: warning: ‘Avogadro::QtPlugins::InsertFragment::m_crystalDialog’ will be initialized after [-Wreorder] 50 | InsertFragmentDialog* m_crystalDialog; | ^~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:49:25: warning: ‘Avogadro::QtPlugins::InsertFragmentDialog* Avogadro::QtPlugins::InsertFragment::m_moleculeDialog’ [-Wreorder] 49 | InsertFragmentDialog* m_moleculeDialog; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp:28:1: warning: when initialized here [-Wreorder] 28 | InsertFragment::InsertFragment(QObject* parent_) | ^~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:55:19: warning: ‘Avogadro::QtPlugins::InsertFragment::m_reader’ will be initialized after [-Wreorder] 55 | Io::FileFormat* m_reader; | ^~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:54:20: warning: ‘Avogadro::QtGui::Molecule* Avogadro::QtPlugins::InsertFragment::m_molecule’ [-Wreorder] 54 | QtGui::Molecule* m_molecule; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp:28:1: warning: when initialized here [-Wreorder] 28 | InsertFragment::InsertFragment(QObject* parent_) | ^~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o -MF CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CoordinateEditor.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -P CMakeFiles/CoordinateEditor.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_link_script CMakeFiles/CoordinateEditor.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CoordinateEditor.a CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CoordinateEditor.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Built target CoordinateEditor make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Generating ui_molecularpropertiesdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/ui_molecularpropertiesdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o -MF CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o.d -o CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragmentdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/sortfiltertreeproxymodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/sortfiltertreeproxymodel.cpp.o -MF CMakeFiles/InsertFragment.dir/sortfiltertreeproxymodel.cpp.o.d -o CMakeFiles/InsertFragment.dir/sortfiltertreeproxymodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o -MF CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o.d -o CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularproperties.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o -MF CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o.d -o CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Linking CXX static library ../../../lib/avogadro2/staticplugins/InsertFragment.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -P CMakeFiles/InsertFragment.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_link_script CMakeFiles/InsertFragment.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/InsertFragment.a CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o CMakeFiles/InsertFragment.dir/insertfragment.cpp.o CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o CMakeFiles/InsertFragment.dir/sortfiltertreeproxymodel.cpp.o CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/InsertFragment.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Built target InsertFragment make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Automatic MOC for target SVG cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/svg/svg.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/svg/svg.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/svg/SVGPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/svg/svg.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/svg/SVGPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVGPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Built target SVG_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Generating ui_vibrationdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/ui_vibrationdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o -MF CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o.d -o CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o -MF CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o.d -o CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Linking CXX static library ../../../lib/avogadro2/staticplugins/MolecularProperties.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -P CMakeFiles/MolecularProperties.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolecularProperties.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/MolecularProperties.a CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/MolecularProperties.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Built target MolecularProperties make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Automatic MOC for target TemplateTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetool.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetool.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/templatetool/templatetool.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetool.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetoolwidget.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Built target TemplateTool_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialog.cpp.o -MF CMakeFiles/Spectra.dir/vibrationdialog.cpp.o.d -o CMakeFiles/Spectra.dir/vibrationdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationmodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationmodel.cpp.o -MF CMakeFiles/Spectra.dir/vibrationmodel.cpp.o.d -o CMakeFiles/Spectra.dir/vibrationmodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationmodel.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/vrml.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/vrml.cpp.o -MF CMakeFiles/VRML.dir/vrml.cpp.o.d -o CMakeFiles/VRML.dir/vrml.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml/vrml.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRMLPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRMLPlugin.cpp.o -MF CMakeFiles/VRML.dir/VRMLPlugin.cpp.o.d -o CMakeFiles/VRML.dir/VRMLPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Linking CXX static library ../../../lib/avogadro2/staticplugins/VRML.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -P CMakeFiles/VRML.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_link_script CMakeFiles/VRML.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/VRML.a CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o CMakeFiles/VRML.dir/vrml.cpp.o CMakeFiles/VRML.dir/VRMLPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/VRML.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Built target VRML make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Automatic MOC for target apbs cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbs.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/opendxreader.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbs.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/opendxreader.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/apbs/apbsPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbs.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbs.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbsdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsoutputdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/apbs/apbsPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbsPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Built target apbs_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Automatic MOC for target Cp2kInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinput.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Built target Cp2kInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/spectra.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/spectra.cpp.o -MF CMakeFiles/Spectra.dir/spectra.cpp.o.d -o CMakeFiles/Spectra.dir/spectra.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/spectra.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Automatic MOC for target GamessInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinput.cpp" AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamesshighlighter.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamessinput.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinput.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Built target GamessInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o -MF CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o.d -o CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Spectra.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -P CMakeFiles/Spectra.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spectra.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Spectra.a CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o CMakeFiles/Spectra.dir/vibrationdialog.cpp.o CMakeFiles/Spectra.dir/vibrationmodel.cpp.o CMakeFiles/Spectra.dir/spectra.cpp.o CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Spectra.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Built target Spectra make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Automatic MOC for target QuantumInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/quantuminput/quantuminput.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/quantuminput/quantuminput.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/quantuminput/quantuminput.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput/quantuminput.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -MF CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 72%] Built target QuantumInput_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/command.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/command.cpp.o -MF CMakeFiles/commands.dir/command.cpp.o.d -o CMakeFiles/commands.dir/command.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts/command.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o -MF CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o.d -o CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.h: In constructor ‘Avogadro::QtPlugins::ScriptChargeModel::ScriptChargeModel(const QString&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.h:86:8: warning: ‘Avogadro::QtPlugins::ScriptChargeModel::m_electrostatics’ will be initialized after [-Wreorder] 86 | bool m_electrostatics; | ^~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.h:82:10: warning: ‘Avogadro::QtPlugins::ScriptChargeModel::Format Avogadro::QtPlugins::ScriptChargeModel::m_inputFormat’ [-Wreorder] 82 | Format m_inputFormat; | ^~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp:28:1: warning: when initialized here [-Wreorder] 28 | ScriptChargeModel::ScriptChargeModel(const QString& scriptFileName_) | ^~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp: In member function ‘virtual Avogadro::MatrixX Avogadro::QtPlugins::ScriptChargeModel::partialCharges(Avogadro::Core::Molecule&) const’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp:95:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare] 95 | for (unsigned int i = 0; i < lines.size(); ++i) { | ~~^~~~~~~~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o -MF CMakeFiles/commands.dir/commandsPlugin.cpp.o.d -o CMakeFiles/commands.dir/commandsPlugin.cpp.o -c 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'/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Built target commands make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o -MF CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o.d -o CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptcharges.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats/scriptfileformats.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o -MF CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o.d -o CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ScriptCharges.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -P CMakeFiles/ScriptCharges.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptCharges.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ScriptCharges.a CMakeFiles/ScriptCharges.dir/ScriptCharges_autogen/mocs_compilation.cpp.o CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ScriptCharges.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Built target ScriptCharges make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Generating ui_downloaderwidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/ui_downloaderwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/downloaderwidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 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-DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ScriptFileFormats.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -P CMakeFiles/ScriptFileFormats.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptFileFormats.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ScriptFileFormats.a CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o CMakeFiles/ScriptFileFormats.dir/scriptfileformats.cpp.o CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ScriptFileFormats.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Built target ScriptFileFormats make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o -MF CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o.d -o CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/plugindownloader.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o -MF CMakeFiles/BallStick.dir/ballandstick.cpp.o.d -o CMakeFiles/BallStick.dir/ballandstick.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick/ballandstick.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -MF CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o.d -o CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Linking CXX static library ../../../lib/avogadro2/staticplugins/BallStick.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/cmake -P CMakeFiles/BallStick.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_link_script CMakeFiles/BallStick.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/BallStick.a CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o CMakeFiles/BallStick.dir/ballandstick.cpp.o CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/BallStick.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Built target BallStick make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o -MF CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o.d -o CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/downloaderwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o -MF CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o.d -o CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/zipextracter.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/zipextracter.cpp: In member function ‘QList Avogadro::QtPlugins::ZipExtracter::extract(std::string, std::string)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/zipextracter.cpp:110:8: warning: unused variable ‘itrCount’ [-Wunused-variable] 110 | long itrCount = 0; | ^~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Building CXX object avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -MF CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o.d -o CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PluginDownloader.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -P CMakeFiles/PluginDownloader.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_link_script CMakeFiles/PluginDownloader.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PluginDownloader.a CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PluginDownloader.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Built target PluginDownloader make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Building CXX object avogadro/qtplugins/force/CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o cd 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-isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o -c 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-I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA 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-I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/force.cpp.o -MF CMakeFiles/Force.dir/force.cpp.o.d -o CMakeFiles/Force.dir/force.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force/force.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Building CXX object avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o -MF CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o.d -o CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Linking CXX static library ../../../lib/avogadro2/staticplugins/CloseContacts.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/cmake -P CMakeFiles/CloseContacts.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_link_script CMakeFiles/CloseContacts.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CloseContacts.a CMakeFiles/CloseContacts.dir/CloseContacts_autogen/mocs_compilation.cpp.o CMakeFiles/CloseContacts.dir/closecontacts.cpp.o CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CloseContacts.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Built target CloseContacts make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Building CXX object avogadro/qtplugins/force/CMakeFiles/Force.dir/ForcePlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/force/CMakeFiles/Force.dir/ForcePlugin.cpp.o -MF CMakeFiles/Force.dir/ForcePlugin.cpp.o.d -o CMakeFiles/Force.dir/ForcePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/ForcePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Force.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/cmake -P CMakeFiles/Force.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_link_script CMakeFiles/Force.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Force.a CMakeFiles/Force.dir/Force_autogen/mocs_compilation.cpp.o CMakeFiles/Force.dir/force.cpp.o CMakeFiles/Force.dir/ForcePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Force.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Built target Force make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/licorice.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/licorice.cpp.o -MF CMakeFiles/Licorice.dir/licorice.cpp.o.d -o CMakeFiles/Licorice.dir/licorice.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice/licorice.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o -MF CMakeFiles/Meshes.dir/meshes.cpp.o.d -o CMakeFiles/Meshes.dir/meshes.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::Meshes::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp:88:51: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.386833].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp: In member function ‘Avogadro::QtPlugins::Meshes::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp:88:51: note: ‘’ declared here 88 | Core::Array colorsRGB(colors.size()); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o -MF CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o.d -o CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Licorice.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -P CMakeFiles/Licorice.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_link_script CMakeFiles/Licorice.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Licorice.a CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o CMakeFiles/Licorice.dir/licorice.cpp.o CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Licorice.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Built target Licorice make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -MF CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o.d -o CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Meshes.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -P CMakeFiles/Meshes.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Meshes.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Meshes.a CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o CMakeFiles/Meshes.dir/meshes.cpp.o CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Meshes.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Built target Meshes make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o -MF CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o.d -o CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals/vanderwaals.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/noncovalent.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/noncovalent.cpp.o -MF CMakeFiles/NonCovalent.dir/noncovalent.cpp.o.d -o CMakeFiles/NonCovalent.dir/noncovalent.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent/noncovalent.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o -MF CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o.d -o CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Linking CXX static library ../../../lib/avogadro2/staticplugins/VanDerWaals.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -P CMakeFiles/VanDerWaals.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_link_script CMakeFiles/VanDerWaals.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/VanDerWaals.a CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/VanDerWaals.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Built target VanDerWaals make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o -MF CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o.d -o CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NonCovalent.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -P CMakeFiles/NonCovalent.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_link_script CMakeFiles/NonCovalent.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NonCovalent.a CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o CMakeFiles/NonCovalent.dir/noncovalent.cpp.o CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NonCovalent.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Built target NonCovalent make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Automatic MOC for target OverlayAxes cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include AutoGen: Parsing "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.cpp" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp.d" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Built target OverlayAxes_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/wireframe.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/wireframe.cpp.o -MF CMakeFiles/Wireframe.dir/wireframe.cpp.o.d -o CMakeFiles/Wireframe.dir/wireframe.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe/wireframe.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o -MF CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o.d -o CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Wireframe.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -P CMakeFiles/Wireframe.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_link_script CMakeFiles/Wireframe.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Wireframe.a CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o CMakeFiles/Wireframe.dir/wireframe.cpp.o CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Wireframe.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Built target Wireframe make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Generating qrc_aligntool.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/lib64/qt5/bin/rcc --name aligntool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/qrc_aligntool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimextension.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimwavefunction.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/aligntool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/aligntool.cpp.o -MF CMakeFiles/AlignTool.dir/aligntool.cpp.o.d -o CMakeFiles/AlignTool.dir/aligntool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:6: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h: In constructor ‘Avogadro::QtPlugins::AlignTool::AlignTool(QObject*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:87:20: warning: ‘Avogadro::QtPlugins::AlignTool::m_toolWidget’ will be initialized after [-Wreorder] 87 | mutable QWidget* m_toolWidget; | ^~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:81:26: warning: ‘Avogadro::Rendering::GLRenderer* Avogadro::QtPlugins::AlignTool::m_renderer’ [-Wreorder] 81 | Rendering::GLRenderer* m_renderer; | ^~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:48:1: warning: when initialized here [-Wreorder] 48 | AlignTool::AlignTool(QObject* parent_) | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:85:7: warning: ‘Avogadro::QtPlugins::AlignTool::m_alignType’ will be initialized after [-Wreorder] 85 | int m_alignType; | ^~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:84:7: warning: ‘int Avogadro::QtPlugins::AlignTool::m_axis’ [-Wreorder] 84 | int m_axis; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:48:1: warning: when initialized here [-Wreorder] 48 | AlignTool::AlignTool(QObject* parent_) | ^~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘void Avogadro::QtPlugins::AlignTool::alignAtomToAxis(Avogadro::Index, int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:159:11: warning: variable ‘align’ set but not used [-Wunused-but-set-variable] 159 | Vector3 align = m_molecule->atom(atomIndex).position3d(); | ^~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:163:10: warning: variable ‘alpha’ set but not used [-Wunused-but-set-variable] 163 | double alpha, beta, gamma; | ^~~~~ In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:14, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:15, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:11: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::AlignTool::shiftAtomToOrigin(unsigned long)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:148:47: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.476753].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::shiftAtomToOrigin(unsigned long)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:148:47: note: ‘’ declared here 148 | Core::Array newCoords(coords.size()); | ^ In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘QVector >::QVector(int, Eigen::Matrix const&)’ at /usr/include/qt5/QtCore/qvector.h:528:13, inlined from ‘Avogadro::QtPlugins::AlignTool::draw(Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:272:55: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.482647].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::draw(Avogadro::Rendering::GroupNode&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:272:54: note: ‘’ declared here 272 | QVector positions(m_atoms.size(), Vector3()); | ^ In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:161:47: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.476778].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:161:47: note: ‘’ declared here 161 | Core::Array newCoords(coords.size()); | ^ In file included from /usr/include/eigen3/Eigen/Geometry:36, from /usr/include/eigen3/Eigen/Dense:6: In member function ‘Eigen::MatrixBase >::cross >(Eigen::MatrixBase > const&) constEigen::MatrixBase >::cross_product_return_type >::type’, inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:181:32: /usr/include/eigen3/Eigen/src/Geometry/OrthoMethods.h:45:31: warning: ‘MEM[(const Scalar &)&axisVector + 8]’ may be used uninitialized [-Wmaybe-uninitialized] 45 | numext::conj(lhs.coeff(1) * rhs.coeff(2) - lhs.coeff(2) * rhs.coeff(1)), | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:168:11: note: ‘axisVector’ declared here 168 | Vector3 axisVector; | ^~~~~~~~~~ In member function ‘Eigen::MatrixBase >::cross >(Eigen::MatrixBase > const&) constEigen::MatrixBase >::cross_product_return_type >::type’, inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:181:32: /usr/include/eigen3/Eigen/src/Geometry/OrthoMethods.h:46:61: warning: ‘MEM[(const Scalar &)&axisVector]’ may be used uninitialized [-Wmaybe-uninitialized] 46 | numext::conj(lhs.coeff(2) * rhs.coeff(0) - lhs.coeff(0) * rhs.coeff(2)), | ~~~~~~~~~~~~~^~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:168:11: note: ‘axisVector’ declared here 168 | Vector3 axisVector; | ^~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:210: In function ‘Eigen::internal::ploadu(Eigen::internal::unpacket_traits::type const*)double __vector(2)’, inlined from ‘Eigen::internal::ploadt(Eigen::internal::unpacket_traits::type const*)double __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/GenericPacketMath.h:969:26, inlined from ‘Eigen::internal::evaluator > >::packet<0, double __vector(2)>(long, long) constdouble __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:238:42, inlined from ‘Eigen::internal::binary_evaluator, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>::packet<0, double __vector(2)>(long, long) constdouble __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:782:80, inlined from ‘Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> >::packetByOuterInner<0, double __vector(2)>(long, long) constdouble __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:386:54, inlined from ‘Eigen::internal::redux_vec_unroller, Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> >, 0, 1>::run(Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> > const&, Eigen::internal::scalar_sum_op const&)double __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:177:66, inlined from ‘Eigen::internal::redux_impl, Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> >, 3, 2>::run, Eigen::Matrix const, Eigen::Matrix const> >(Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> > const&, Eigen::internal::scalar_sum_op const&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&)double’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:344:115, inlined from ‘Eigen::DenseBase, Eigen::Matrix const, Eigen::Matrix const> >::redux >(Eigen::internal::scalar_sum_op const&) constdouble’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56, inlined from ‘Eigen::DenseBase, Eigen::Matrix const, Eigen::Matrix const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25, inlined from ‘Eigen::internal::dot_nocheck, Eigen::Matrix, false>::run(Eigen::MatrixBase > const&, Eigen::MatrixBase > const&)’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:37:51, inlined from ‘Eigen::MatrixBase >::dot >(Eigen::MatrixBase > const&) constEigen::ScalarBinaryOpTraits >::Scalar, Eigen::internal::scalar_product_op >::Scalar> >::ReturnType’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:84:58, inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:178:22: /usr/include/eigen3/Eigen/src/Core/arch/AltiVec/PacketMath.h:2465:16: warning: ‘MEM [(void *)&axisVector]’ may be used uninitialized [-Wmaybe-uninitialized] 2465 | return vec_xl(0, const_cast(from)); | ^ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:168:11: note: ‘axisVector’ declared here 168 | Vector3 axisVector; | ^~~~~~~~~~ In file included from /usr/include/eigen3/Eigen/Core:172: In function ‘Eigen::internal::pmul(double const&, double const&)double’, inlined from ‘Eigen::internal::conj_helper::pmul(double const&, double const&) const’ at /usr/include/eigen3/Eigen/src/Core/arch/Default/ConjHelper.h:99:33, inlined from ‘Eigen::internal::scalar_conj_product_op::operator()(double const&, double const&) const’ at /usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:118:62, inlined from ‘Eigen::internal::binary_evaluator, Eigen::Matrix const, Eigen::Matrix const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22, inlined from ‘Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23, inlined from ‘Eigen::internal::redux_novec_unroller, Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> >, 2, 1>::run(Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> > const&, Eigen::internal::scalar_sum_op const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34, inlined from ‘Eigen::internal::redux_impl, Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> >, 3, 2>::run, Eigen::Matrix const, Eigen::Matrix const> >(Eigen::internal::redux_evaluator, Eigen::Matrix const, Eigen::Matrix const> > const&, Eigen::internal::scalar_sum_op const&, Eigen::CwiseBinaryOp, Eigen::Matrix const, Eigen::Matrix const> const&)double’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:346:103, inlined from ‘Eigen::DenseBase, Eigen::Matrix const, Eigen::Matrix const> >::redux >(Eigen::internal::scalar_sum_op const&) constdouble’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56, inlined from ‘Eigen::DenseBase, Eigen::Matrix const, Eigen::Matrix const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25, inlined from ‘Eigen::internal::dot_nocheck, Eigen::Matrix, false>::run(Eigen::MatrixBase > const&, Eigen::MatrixBase > const&)’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:37:51, inlined from ‘Eigen::MatrixBase >::dot >(Eigen::MatrixBase > const&) constEigen::ScalarBinaryOpTraits >::Scalar, Eigen::internal::scalar_product_op >::Scalar> >::ReturnType’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:84:58, inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:178:22: /usr/include/eigen3/Eigen/src/Core/GenericPacketMath.h:237:51: warning: ‘MEM [(struct DenseStorage *)&axisVector + 16B]’ may be used uninitialized [-Wmaybe-uninitialized] 237 | pmul(const Packet& a, const Packet& b) { return a*b; } | ^ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:168:11: note: ‘MEM [(struct DenseStorage *)&axisVector + 16B]’ was declared here 168 | Vector3 axisVector; | ^~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o -MF CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o.d -o CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/qrc_aligntool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o -MF CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o.d -o CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Linking CXX static library ../../../lib/avogadro2/staticplugins/AlignTool.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/cmake -P CMakeFiles/AlignTool.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_link_script CMakeFiles/AlignTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/AlignTool.a CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o CMakeFiles/AlignTool.dir/aligntool.cpp.o CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/AlignTool.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Built target AlignTool make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Generating qrc_bondcentrictool.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/lib64/qt5/bin/rcc --name bondcentrictool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/qrc_bondcentrictool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp: In member function ‘Avogadro::QtPlugins::QTAIMODEIntegrator::r8_f(double, double*, double*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:262:9: warning: ‘MEM[(double &)&gradient + 16]’ may be used uninitialized [-Wmaybe-uninitialized] 262 | sqrt(gradient(0) * gradient(0) + gradient(1) * gradient(1) + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 | gradient(2) * gradient(2)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:196:23: note: ‘MEM[(double &)&gradient + 16]’ was declared here 196 | Matrix gradient; | ^~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp: In member function ‘Avogadro::QtPlugins::QTAIMODEIntegrator::integrate(QVector3D)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:151:40: warning: ‘abserr’ may be used uninitialized [-Wmaybe-uninitialized] 151 | flag = QTAIMODEIntegrator::r8_rkf45(NEQN, y, yp, &t, t_out, &relerr, abserr, | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 | flag); | ~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:53:9: note: ‘abserr’ was declared here 53 | qreal abserr; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:56:10: warning: ‘n_step’ may be used uninitialized [-Wmaybe-uninitialized] 56 | qint64 n_step; | ^~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:145:69: warning: ‘t_stop’ may be used uninitialized [-Wmaybe-uninitialized] 145 | ((qreal)(n_step - i_step + 1) * t_start + (qreal)(i_step - 1) * t_stop) / | ~~~~~~~~~~~~~~~~~~~~^~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:61:9: note: ‘t_stop’ was declared here 61 | qreal t_stop; | ^~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimcriticalpointlocator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimcriticalpointlocator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimcriticalpointlocator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimcriticalpointlocator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimcriticalpointlocator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o -MF CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o.d -o CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o -MF CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o.d -o CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/qrc_bondcentrictool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o -MF CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o.d -o CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Linking CXX static library ../../../lib/avogadro2/staticplugins/BondCentric.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -P CMakeFiles/BondCentric.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_link_script CMakeFiles/BondCentric.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/BondCentric.a CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o CMakeFiles/BondCentric.dir/qrc_bondcentrictool.cpp.o CMakeFiles/BondCentric.dir/BondCentricPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/BondCentric.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Built target BondCentric make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp: In member function ‘Avogadro::QtPlugins::QTAIMLSODAIntegrator::f(int, double, double*, double*)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp:237:9: warning: ‘MEM[(double &)&gradient + 16]’ may be used uninitialized [-Wmaybe-uninitialized] 237 | sqrt(gradient(0) * gradient(0) + gradient(1) * gradient(1) + | ~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 | gradient(2) * gradient(2)); | ~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp:171:23: note: ‘MEM[(double &)&gradient + 16]’ was declared here 171 | Matrix gradient; | ^~~~~~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimmathutilities.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimmathutilities.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimmathutilities.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimmathutilities.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimmathutilities.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o -MF CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Generating ui_editortoolwidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/ui_editortoolwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editortoolwidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Generating qrc_editor.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/lib64/qt5/bin/rcc --name editor --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/qrc_editor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editor.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimcubature.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Linking CXX static library ../../../lib/avogadro2/staticplugins/QTAIMExtension.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -P CMakeFiles/QTAIMExtension.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_link_script CMakeFiles/QTAIMExtension.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/QTAIMExtension.a CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimcriticalpointlocator.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimmathutilities.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/QTAIMExtension.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Built target QTAIMExtension make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/focus.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/focus.cpp.o -MF CMakeFiles/Focus.dir/focus.cpp.o.d -o CMakeFiles/Focus.dir/focus.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus/focus.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editor.cpp.o -MF CMakeFiles/Editor.dir/editor.cpp.o.d -o CMakeFiles/Editor.dir/editor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/FocusPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/FocusPlugin.cpp.o -MF CMakeFiles/Focus.dir/FocusPlugin.cpp.o.d -o CMakeFiles/Focus.dir/FocusPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/FocusPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Focus.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -P CMakeFiles/Focus.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_link_script CMakeFiles/Focus.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Focus.a CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o CMakeFiles/Focus.dir/focus.cpp.o CMakeFiles/Focus.dir/FocusPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Focus.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Built target Focus make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Generating qrc_label.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/lib64/qt5/bin/rcc --name label --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/qrc_label.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/label.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editortoolwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editortoolwidget.cpp.o -MF CMakeFiles/Editor.dir/editortoolwidget.cpp.o.d -o CMakeFiles/Editor.dir/editortoolwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editortoolwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/qrc_editor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/qrc_editor.cpp.o -MF CMakeFiles/Editor.dir/qrc_editor.cpp.o.d -o CMakeFiles/Editor.dir/qrc_editor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/qrc_editor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/EditorPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/EditorPlugin.cpp.o -MF CMakeFiles/Editor.dir/EditorPlugin.cpp.o.d -o CMakeFiles/Editor.dir/EditorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/EditorPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Editor.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -P CMakeFiles/Editor.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Editor.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Editor.a CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o CMakeFiles/Editor.dir/editor.cpp.o CMakeFiles/Editor.dir/editortoolwidget.cpp.o CMakeFiles/Editor.dir/qrc_editor.cpp.o CMakeFiles/Editor.dir/EditorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Editor.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Built target Editor make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Generating ui_manipulatewidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/ui_manipulatewidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulatewidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Generating qrc_manipulator.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/lib64/qt5/bin/rcc --name manipulator --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/qrc_manipulator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulator.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/labeleditor.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/labeleditor.cpp.o -MF CMakeFiles/LabelEditor.dir/labeleditor.cpp.o.d -o CMakeFiles/LabelEditor.dir/labeleditor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/labeleditor.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 87%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/qrc_label.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/qrc_label.cpp.o -MF CMakeFiles/LabelEditor.dir/qrc_label.cpp.o.d -o CMakeFiles/LabelEditor.dir/qrc_label.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/qrc_label.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 87%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 88%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o -MF CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o.d -o CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 88%] Linking CXX static library ../../../lib/avogadro2/staticplugins/LabelEditor.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -P CMakeFiles/LabelEditor.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabelEditor.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LabelEditor.a CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o CMakeFiles/LabelEditor.dir/labeleditor.cpp.o CMakeFiles/LabelEditor.dir/qrc_label.cpp.o CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LabelEditor.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 88%] Built target LabelEditor make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Generating qrc_measuretool.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/lib64/qt5/bin/rcc --name measuretool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/qrc_measuretool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 88%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/manipulator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/manipulator.cpp.o -MF CMakeFiles/Manipulator.dir/manipulator.cpp.o.d -o CMakeFiles/Manipulator.dir/manipulator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o -MF CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o.d -o CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/qrc_manipulator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/measuretool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/measuretool.cpp.o -MF CMakeFiles/MeasureTool.dir/measuretool.cpp.o.d -o CMakeFiles/MeasureTool.dir/measuretool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp:11: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘QVector >::QVector(int, Eigen::Matrix const&)’ at /usr/include/qt5/QtCore/qvector.h:528:13, inlined from ‘Avogadro::QtPlugins::MeasureTool::draw(Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp:157:55: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.472526].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp: In member function ‘Avogadro::QtPlugins::MeasureTool::draw(Avogadro::Rendering::GroupNode&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp:157:54: note: ‘’ declared here 157 | QVector positions(m_atoms.size(), Vector3()); | ^ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o -MF CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o.d -o CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/qrc_measuretool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o -MF CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o.d -o CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Manipulator.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -P CMakeFiles/Manipulator.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_link_script CMakeFiles/Manipulator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Manipulator.a CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o CMakeFiles/Manipulator.dir/manipulator.cpp.o CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Manipulator.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Built target Manipulator make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Generating qrc_navigator.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/lib64/qt5/bin/rcc --name navigator --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/qrc_navigator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator/navigator.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o -MF CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o.d -o CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Linking CXX static library ../../../lib/avogadro2/staticplugins/MeasureTool.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -P CMakeFiles/MeasureTool.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeasureTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/MeasureTool.a CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o CMakeFiles/MeasureTool.dir/measuretool.cpp.o CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/MeasureTool.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Built target MeasureTool make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Generating qrc_playertool.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/lib64/qt5/bin/rcc --name playertool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/qrc_playertool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool/playertool.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/navigator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/navigator.cpp.o -MF CMakeFiles/Navigator.dir/navigator.cpp.o.d -o CMakeFiles/Navigator.dir/navigator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator/navigator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/qrc_navigator.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/qrc_navigator.cpp.o -MF CMakeFiles/Navigator.dir/qrc_navigator.cpp.o.d -o CMakeFiles/Navigator.dir/qrc_navigator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/qrc_navigator.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/playertool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/playertool.cpp.o -MF CMakeFiles/PlayerTool.dir/playertool.cpp.o.d -o CMakeFiles/PlayerTool.dir/playertool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool/playertool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o -MF CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o.d -o CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/qrc_playertool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o -MF CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o.d -o CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Navigator.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -P CMakeFiles/Navigator.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_link_script CMakeFiles/Navigator.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Navigator.a CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o CMakeFiles/Navigator.dir/navigator.cpp.o CMakeFiles/Navigator.dir/qrc_navigator.cpp.o CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Navigator.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Built target Navigator make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o -MF CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o.d -o CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PlayerTool.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -P CMakeFiles/PlayerTool.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_link_script CMakeFiles/PlayerTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PlayerTool.a CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o CMakeFiles/PlayerTool.dir/playertool.cpp.o CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PlayerTool.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Built target PlayerTool make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o -MF CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o.d -o CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetViewPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Generating ui_selectiontoolwidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/ui_selectiontoolwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.ui: Warning: The name 'label' (QLabel) is already in use, defaulting to 'label1'. make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Generating qrc_selectiontool.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/lib64/qt5/bin/rcc --name selectiontool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o -MF CMakeFiles/Selection.dir/selectiontool.cpp.o.d -o CMakeFiles/Selection.dir/selectiontool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.h:13, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::SelectionTool::draw(Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp:203:26: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.477651].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp: In member function ‘Avogadro::QtPlugins::SelectionTool::draw(Avogadro::Rendering::GroupNode&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp:203:26: note: ‘’ declared here 203 | Array verts(4); | ^ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o -MF CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o.d -o CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp: In member function ‘void Avogadro::QtPlugins::SelectionToolWidget::setDropDown(size_t, size_t)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp:36:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare] 36 | if (current != m_ui->changeLayerDropDown->currentIndex()) | ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -MF CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o.d -o CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -MF CMakeFiles/Selection.dir/SelectionPlugin.cpp.o.d -o CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Selection.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -P CMakeFiles/Selection.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selection.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Selection.a CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o CMakeFiles/Selection.dir/selectiontool.cpp.o CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o CMakeFiles/Selection.dir/SelectionPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Selection.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Built target Selection make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Generating ui_surfacedialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/ui_surfacedialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfacedialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o -MF CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o.d -o CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/gaussiansetconcurrent.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Building CXX object avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/resetview.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/resetview.cpp.o -MF CMakeFiles/ResetView.dir/resetview.cpp.o.d -o CMakeFiles/ResetView.dir/resetview.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview/resetview.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ResetView.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/cmake -P CMakeFiles/ResetView.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/cmake -E cmake_link_script CMakeFiles/ResetView.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ResetView.a CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o CMakeFiles/ResetView.dir/resetview.cpp.o CMakeFiles/ResetView.dir/ResetViewPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ResetView.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Built target ResetView make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o -MF CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o.d -o CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/slatersetconcurrent.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtSvg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfacedialog.cpp.o -MF CMakeFiles/Surfaces.dir/surfacedialog.cpp.o.d -o CMakeFiles/Surfaces.dir/surfacedialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfacedialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/svg.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtSvg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/svg.cpp.o -MF CMakeFiles/SVG.dir/svg.cpp.o.d -o CMakeFiles/SVG.dir/svg.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Geometry:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.h:9, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘Avogadro::QtPlugins::SVG::SVGAtom::SVGAtom(Avogadro::QtPlugins::SVG::SVGAtom const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.h:47:10, inlined from ‘std::__new_allocator::construct(Avogadro::QtPlugins::SVG::SVGAtom*, Avogadro::QtPlugins::SVG::SVGAtom const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4, inlined from ‘std::allocator_traits >::construct(std::allocator&, Avogadro::QtPlugins::SVG::SVGAtom*, Avogadro::QtPlugins::SVG::SVGAtom const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17, inlined from ‘std::vector >::push_back(Avogadro::QtPlugins::SVG::SVGAtom const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30, inlined from ‘Avogadro::QtPlugins::SVG::getPositions()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp:154:22: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&atom + 24].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp: In member function ‘Avogadro::QtPlugins::SVG::getPositions()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp:152:13: note: ‘atom’ declared here 152 | SVGAtom atom(atomPositions[i].cast(), pos, i, | ^~~~ make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVGPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtSvg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVGPlugin.cpp.o -MF CMakeFiles/SVG.dir/SVGPlugin.cpp.o.d -o CMakeFiles/SVG.dir/SVGPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVGPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Linking CXX static library ../../../lib/avogadro2/staticplugins/SVG.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/cmake -P CMakeFiles/SVG.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_link_script CMakeFiles/SVG.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/SVG.a CMakeFiles/SVG.dir/SVG_autogen/mocs_compilation.cpp.o CMakeFiles/SVG.dir/svg.cpp.o CMakeFiles/SVG.dir/SVGPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/SVG.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Built target SVG make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Generating ui_templatetoolwidget.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/ui_templatetoolwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetoolwidget.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Generating qrc_template.cpp cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/lib64/qt5/bin/rcc --name template --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/qrc_template.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/template.qrc make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o -MF CMakeFiles/Surfaces.dir/surfaces.cpp.o.d -o CMakeFiles/Surfaces.dir/surfaces.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/matrix.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.h:12, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp:19: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::Surfaces::colorMeshByPotential()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp:776:51: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.508717].m_storage’ may be used uninitialized [-Wmaybe-uninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp: In member function ‘Avogadro::QtPlugins::Surfaces::colorMeshByPotential()’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp:776:51: note: ‘’ declared here 776 | Core::Array positions(positionsf.size()); | ^ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -MF CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o.d -o CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Surfaces.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -P CMakeFiles/Surfaces.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_link_script CMakeFiles/Surfaces.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Surfaces.a CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o CMakeFiles/Surfaces.dir/surfacedialog.cpp.o CMakeFiles/Surfaces.dir/surfaces.cpp.o CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Surfaces.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Built target Surfaces make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Generating ui_apbsoutputdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/ui_apbsoutputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsoutputdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Generating ui_apbsdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/ui_apbsdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o -MF CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o -MF CMakeFiles/apbs.dir/apbs.cpp.o.d -o CMakeFiles/apbs.dir/apbs.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbs.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o -MF CMakeFiles/apbs.dir/apbsdialog.cpp.o.d -o CMakeFiles/apbs.dir/apbsdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o -MF CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o.d -o CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsoutputdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o -MF CMakeFiles/apbs.dir/opendxreader.cpp.o.d -o CMakeFiles/apbs.dir/opendxreader.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/opendxreader.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Building CXX object avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o -MF CMakeFiles/apbs.dir/apbsPlugin.cpp.o.d -o CMakeFiles/apbs.dir/apbsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbsPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Linking CXX static library ../../../lib/avogadro2/staticplugins/apbs.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/cmake -P CMakeFiles/apbs.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_link_script CMakeFiles/apbs.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/apbs.a CMakeFiles/apbs.dir/apbs_autogen/mocs_compilation.cpp.o CMakeFiles/apbs.dir/apbs.cpp.o CMakeFiles/apbs.dir/apbsdialog.cpp.o CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o CMakeFiles/apbs.dir/opendxreader.cpp.o CMakeFiles/apbs.dir/apbsPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/apbs.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Built target apbs make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Generating ui_cp2kinputdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/ui_cp2kinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetool.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool 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-Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetool.cpp.o -MF CMakeFiles/TemplateTool.dir/templatetool.cpp.o.d -o CMakeFiles/TemplateTool.dir/templatetool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetool.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o -MF CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o.d -o 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-I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o -MF CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o.d -o CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetoolwidget.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/qrc_template.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/qrc_template.cpp.o -MF CMakeFiles/TemplateTool.dir/qrc_template.cpp.o.d -o CMakeFiles/TemplateTool.dir/qrc_template.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/qrc_template.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o -MF CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o.d -o CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o -MF CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o.d -o CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Linking CXX static library ../../../lib/avogadro2/staticplugins/TemplateTool.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -P CMakeFiles/TemplateTool.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_link_script CMakeFiles/TemplateTool.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/TemplateTool.a CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o CMakeFiles/TemplateTool.dir/templatetool.cpp.o CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o CMakeFiles/TemplateTool.dir/qrc_template.cpp.o CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/TemplateTool.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Built target TemplateTool make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Generating ui_gamessinputdialog.h cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/ui_gamessinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.ui make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o -MF CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o.d -o CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Cp2kInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -P CMakeFiles/Cp2kInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cp2kInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Cp2kInput.a CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Cp2kInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Built target Cp2kInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/quantuminput.cpp.o -MF CMakeFiles/QuantumInput.dir/quantuminput.cpp.o.d -o CMakeFiles/QuantumInput.dir/quantuminput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput/quantuminput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o -MF CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o.d -o CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Building CXX object avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o -MF CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o.d -o CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/QuantumInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/cmake -P CMakeFiles/QuantumInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_link_script CMakeFiles/QuantumInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/QuantumInput.a CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o CMakeFiles/QuantumInput.dir/quantuminput.cpp.o CMakeFiles/QuantumInput.dir/QuantumInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/QuantumInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Built target QuantumInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o -MF CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o.d -o CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamesshighlighter.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/gamessinput.cpp.o -MF CMakeFiles/GamessInput.dir/gamessinput.cpp.o.d -o CMakeFiles/GamessInput.dir/gamessinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinput.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -MF CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o.d -o CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/GamessInput.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -P CMakeFiles/GamessInput.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/GamessInput.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/GamessInput.a CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o CMakeFiles/GamessInput.dir/gamessinput.cpp.o CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/GamessInput.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Built target GamessInput make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o -MF CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o.d -o CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp In file included from /usr/include/eigen3/Eigen/Core:294, from /usr/include/eigen3/Eigen/Dense:1, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:11, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:14, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:15, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.h:10, from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:6: In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix const&, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:145:39: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.462642].m_storage’ is used uninitialized [-Wuninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp: In member function ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix const&, Eigen::Matrix const&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:145:39: note: ‘’ declared here 145 | Array vertices(numVertices); | ^ In member function ‘Eigen::PlainObjectBase >::PlainObjectBase(Eigen::PlainObjectBase > const&)’, inlined from ‘Eigen::Matrix::Matrix(Eigen::Matrix const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65, inlined from ‘std::_Construct, Eigen::Matrix const&>(Eigen::Matrix*, Eigen::Matrix const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7, inlined from ‘std::__do_uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21, inlined from ‘std::__uninitialized_fill_n::__uninit_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34, inlined from ‘std::uninitialized_fill_n*, unsigned long, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17, inlined from ‘std::__uninitialized_fill_n_a*, unsigned long, Eigen::Matrix, Eigen::Matrix >(Eigen::Matrix*, unsigned long, Eigen::Matrix const&, std::allocator >&)Eigen::Matrix*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39, inlined from ‘std::vector, std::allocator > >::_M_fill_initialize(unsigned long, Eigen::Matrix const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33, inlined from ‘std::vector, std::allocator > >::vector(unsigned long, Eigen::Matrix const&, std::allocator > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27, inlined from ‘Avogadro::Core::internal::ArrayRefContainer >::ArrayRefContainer(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17, inlined from ‘Avogadro::Core::Array >::Array(unsigned long, Eigen::Matrix const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9, inlined from ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix const&, Eigen::Matrix const&)’ at /builddir/build/BUILD/avmake[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' ogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:146:38: /usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.462644].m_storage’ is used uninitialized [-Wuninitialized] 512 | : Base(), m_storage(other.m_storage) { } | ^~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp: In member function ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix const&, Eigen::Matrix const&)’: /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:146:38: note: ‘’ declared here 146 | Array normals(numVertices); | ^ make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o -MF CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o.d -o CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OverlayAxes.a cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -P CMakeFiles/OverlayAxes.dir/cmake_clean_target.cmake cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_link_script CMakeFiles/OverlayAxes.dir/link.txt --verbose=1 /usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OverlayAxes.a CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o /usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OverlayAxes.a make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Built target OverlayAxes make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Automatic MOC for target QtPlugins cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/AutogenInfo.json Release AutoGen: Refreshing parse cache because it doesn't exist. AutoMoc: Generating "SRC:/build/avogadro/qtplugins/QtPlugins_autogen/moc_predefs.h", because it doesn't exist. /usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/eigen3 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginfactory.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginmanager.h" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/avogadroqtpluginsexport.h" AutoGen: Parsing "SRC:/build/avogadro/qtplugins/avogadrostaticqtplugins.h" AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginmanager.cpp" AutoMoc: Generating "SRC:/build/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/pluginmanager.h" /usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/eigen3 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/ppc64le-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/ppc64le-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/pluginmanager.h AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp.d" AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/QtPlugins_autogen/mocs_compilation.cpp" AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/ParseCache.txt" AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/AutogenUsed.txt" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Built target QtPlugins_autogen make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [100%] Building CXX object avogadro/qtplugins/CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/eigen3 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/mocs_compilation.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [100%] Building CXX object avogadro/qtplugins/CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/eigen3 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -MF CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o.d -o CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/pluginmanager.cpp make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [100%] Linking CXX shared library ../../lib/libAvogadroQtPlugins.so cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtPlugins.dir/link.txt --verbose=1 /usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -DEIGEN_ALTIVEC_DISABLE_MMA -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroQtPlugins.so.1 -o ../../lib/libAvogadroQtPlugins.so.1.98.1 CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/avogadro2/staticplugins/ThreeDMol.a ../../lib/avogadro2/staticplugins/ApplyColors.a ../../lib/avogadro2/staticplugins/AlignTool.a ../../lib/avogadro2/staticplugins/BondCentric.a ../../lib/avogadro2/staticplugins/Bonding.a ../../lib/avogadro2/staticplugins/Cartoons.a ../../lib/avogadro2/staticplugins/Centroid.a ../../lib/avogadro2/staticplugins/CopyPaste.a ../../lib/avogadro2/staticplugins/Crystal.a ../../lib/avogadro2/staticplugins/CrystalScene.a ../../lib/avogadro2/staticplugins/CustomElements.a ../../lib/avogadro2/staticplugins/Editor.a ../../lib/avogadro2/staticplugins/FetchPDB.a ../../lib/avogadro2/staticplugins/Focus.a ../../lib/avogadro2/staticplugins/Forcefield.a ../../lib/avogadro2/staticplugins/Hydrogens.a ../../lib/avogadro2/staticplugins/ImportPQR.a ../../lib/avogadro2/staticplugins/NucleicInput.a ../../lib/avogadro2/staticplugins/Label.a ../../lib/avogadro2/staticplugins/LabelEditor.a ../../lib/avogadro2/staticplugins/LineFormatInput.a ../../lib/avogadro2/staticplugins/Manipulator.a ../../lib/avogadro2/staticplugins/MeasureTool.a ../../lib/avogadro2/staticplugins/Navigator.a ../../lib/avogadro2/staticplugins/NetworkDatabases.a ../../lib/avogadro2/staticplugins/OpenBabel.a ../../lib/avogadro2/staticplugins/PlayerTool.a ../../lib/avogadro2/staticplugins/PLY.a ../../lib/avogadro2/staticplugins/POVRay.a ../../lib/avogadro2/staticplugins/PropertyTables.a ../../lib/avogadro2/staticplugins/ResetView.a ../../lib/avogadro2/staticplugins/Select.a ../../lib/avogadro2/staticplugins/Selection.a ../../lib/avogadro2/staticplugins/SpaceGroup.a ../../lib/avogadro2/staticplugins/Surfaces.a ../../lib/avogadro2/staticplugins/LammpsInput.a ../../lib/avogadro2/staticplugins/OpenMMInput.a ../../lib/avogadro2/staticplugins/CoordinateEditor.a ../../lib/avogadro2/staticplugins/InsertFragment.a ../../lib/avogadro2/staticplugins/MolecularProperties.a ../../lib/avogadro2/staticplugins/SVG.a ../../lib/avogadro2/staticplugins/Spectra.a ../../lib/avogadro2/staticplugins/TemplateTool.a ../../lib/avogadro2/staticplugins/VRML.a ../../lib/avogadro2/staticplugins/apbs.a ../../lib/avogadro2/staticplugins/Cp2kInput.a ../../lib/avogadro2/staticplugins/GamessInput.a ../../lib/avogadro2/staticplugins/commands.a ../../lib/avogadro2/staticplugins/QuantumInput.a ../../lib/avogadro2/staticplugins/ScriptCharges.a ../../lib/avogadro2/staticplugins/ScriptFileFormats.a ../../lib/avogadro2/staticplugins/PluginDownloader.a ../../lib/avogadro2/staticplugins/BallStick.a ../../lib/avogadro2/staticplugins/CloseContacts.a ../../lib/avogadro2/staticplugins/Force.a ../../lib/avogadro2/staticplugins/Licorice.a ../../lib/avogadro2/staticplugins/Meshes.a ../../lib/avogadro2/staticplugins/NonCovalent.a ../../lib/avogadro2/staticplugins/VanDerWaals.a ../../lib/avogadro2/staticplugins/Wireframe.a ../../lib/avogadro2/staticplugins/OverlayAxes.a ../../lib/avogadro2/staticplugins/QTAIMExtension.a ../../lib/avogadro2/staticplugins/QTAIMScenePlugin.a ../../lib/libAvogadroCalc.so.1.98.1 ../../thirdparty/libgwavi/libgwavi.a /usr/lib64/libQt5Svg.so.5.15.11 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 ../../lib/libAvogadroMoleQueue.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../../lib/libAvogadroQuantumIO.so.1.98.1 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libarchive.so ../../lib/libAvogadroQtOpenGL.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 /usr/lib64/libGLX.so /usr/lib64/libOpenGL.so /usr/lib64/libGLEW.so /usr/lib64/libQt5Concurrent.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroIO.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../../lib/libAvogadroRendering.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtPlugins.so.1.98.1 ../../lib/libAvogadroQtPlugins.so.1 ../../lib/libAvogadroQtPlugins.so make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:61: warning: type ‘Avogadro::QtPlugins::BasisOption’ violates the C++ One Definition Rule [-Wodr] 61 | enum BasisOption | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:59: note: an enum with different value name is defined in another translation unit 59 | enum BasisOption | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:63: note: name ‘BasisSZVGTH’ differs from name ‘BasisSTO3G’ defined in another translation unit 63 | BasisSZVGTH = 0, | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:61: note: mismatching definition 61 | BasisSTO3G = 0, | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:40: warning: type ‘Avogadro::QtPlugins::CalculateOption’ violates the C++ One Definition Rule [-Wodr] 40 | enum CalculateOption | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:37: note: an enum with different value name is defined in another translation unit 37 | enum CalculateOption | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:42: note: name ‘CalculateEnergy’ differs from name ‘CalculateSinglePoint’ defined in another translation unit 42 | CalculateEnergy = 0, | /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:39: note: mismatching definition 39 | CalculateSinglePoint = 0, | make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [100%] Built target QtPlugins make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles 0 make: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' + pushd build/docs ~/build/BUILD/avogadrolibs-1.98.1/build/docs ~/build/BUILD/avogadrolibs-1.98.1 + doxygen warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 102 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'HTML_TIMESTAMP' at line 1244 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'FORMULA_TRANSPARENT' at line 1549 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_SOURCE_CODE' at line 1862 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'LATEX_TIMESTAMP' at line 1878 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'RTF_SOURCE_CODE' at line 1952 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOCBOOK_PROGRAMLISTING' at line 2057 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'CLASS_DIAGRAMS' at line 2266 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTNAME' at line 2308 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_FONTSIZE' at line 2315 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: Tag 'DOT_TRANSPARENT' at line 2561 of file 'doxyfile' has become obsolete. To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u" warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value Using the default: a4! warning: doxygen no longer ships with the FreeSans font. You may want to clear or change DOT_FONTNAME. Otherwise you run the risk that the wrong font is being used for dot generated graphs. warning: source 'images' is not a readable file or directory... skipping. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:177: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:188: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:38: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:42: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:84: warning: unbalanced grouping commands Doxygen version used: 1.9.8 Searching for include files... Searching for example files... Searching for images... Searching for dot files... Searching for msc files... Searching for dia files... Searching for files to exclude Searching INPUT for files to process... Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/icons Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/icons/fallback Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/icons/fallback/64x64 Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/icons/fallback/32x32 Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/icons/colormap Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc Searching for files in directory /builddir/build/BUILD/avogadrolibs-1.98.1/docs Reading and parsing tag files Parsing files Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energymanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energymanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjonesdata.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjonesdata.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angletools.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angletools.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper-inline.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper-inline.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomutilities.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomutilities.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avogadrocore.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avogadrocore.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avospglib.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avospglib.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/color3f.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/color3f.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elements.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elements.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussiansettools.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussiansettools.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/matrix.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/matrix.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mdlvalence_p.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mdlvalence_p.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avog/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:90: warning: unbalanced grouping commands adro/core/mutex.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mutex.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/nameatomtyper.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/nameatomtyper.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/sharedmutex.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/sharedmutex.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slatersettools.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slatersettools.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroups.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroups.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/symbolatomtyper.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/symbolatomtyper.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/utilities.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/utilities.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cjsonformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cjsonformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cmlformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cmlformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/dcdformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/dcdformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/gromacsformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/gromacsformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mdlformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mdlformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mmtfformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mmtfformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/pdbformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/pdbformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/trrformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/trrformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/turbomoleformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/turbomoleformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/vaspformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/vaspformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/xyzformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/xyzformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jobobject.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jobobject.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h:128: warning: unbalanced grouping commands 1.98.1/avogadro/molequeue/molequeuewidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/backgroundfileformat.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/backgroundfileformat.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementdetail_p.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementdetail_p.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementitem_p.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementitem_p.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementtranslator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementtranslator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/utilities.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/utilities.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/viewfactory.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/viewfactory.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/qttextrenderstrategy.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/qttextrenderstrategy.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessus.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessus.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumi/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:77: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:84: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:91: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:103: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:110: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:117: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:124: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:131: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:138: warning: unbalanced grouping commands /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:116: warning: unbalanced grouping commands o/mopacaux.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrogl.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrogl.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrorendering.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrorendering.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel2d.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel2d.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel3d.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel3d.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textrenderstrategy.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textrenderstrategy.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogad/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h:24: warning: Compound Avogadro::Calc::EnergyCalculator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:21: warning: Compound Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:23: warning: Compound Avogadro::Core::AngleIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:59: warning: Compound Avogadro::Core::ArraySet::Holder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:48: warning: Compound Avogadro::Core::ArraySet::PlaceHolder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:47: warning: Compound Avogadro::Core::AtomTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomutilities.h:22: warning: Compound Avogadro::Core::AtomUtilities is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:23: warning: Compound Avogadro::Core::BondTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:23: warning: Compound Avogadro::Core::DihedralIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:88: warning: Compound Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:11: warning: Compound Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:19: warning: Compound Avogadro::Core::RingPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:36: warning: Compound Avogadro::Core::SecondaryStructureAssigner is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:22: warning: Compound Avogadro::Core::hBondRecord is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:22: warning: Compound Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:32: warning: Compound Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.h:57: warning: Compound Avogadro::Io::LammpsDataFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/vaspformat.h:51: warning: Compound Avogadro::Io::OutcarFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementdetail_p.h:24: warning: Compound Avogadro::QtGui::ElementDetail is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementitem_p.h:24: warning: Compound Avogadro::QtGui::ElementItem is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:20: warning: Compound Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h:21: warning: Compound Avogadro::QtGui::HydrogenTools is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:19: warning: Compound Avogadro::QtGui::MoleculeSystem is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h:25: warning: Compound Avogadro::QtGui::PeriodicTableScene is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:671: warning: Compound Avogadro::QtGui::RWAtom is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:678: warning: Compound Avogadro::QtGui::RWBond is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:27: warning: Compound Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:37: warning: Compound Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessus.h:18: warning: Compound Avogadro::QuantumIO::GAMESSUSOutput is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:77: warning: Compound Avogadro::QuantumIO::GamessukOut is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.h:17: warning: Compound Avogadro::QuantumIO::GaussianCube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h:20: warning: Compound Avogadro::QuantumIO::GaussianFchk is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.h:18: warning: Compound Avogadro::QuantumIO::GenericOutput is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.h:18: warning: Compound Avogadro::QuantumIO::MoldenFile is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h:19: warning: Compound Avogadro::QuantumIO::MopacAux is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h:19: warning: Compound Avogadro::QuantumIO::NWChemLog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h:20: warning: Compound Avogadro::QuantumIO::ORCAOutput is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:14: warning: Compound Avogadro::Rendering::BSplineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h:14: warning: Compound Avogadro::Rendering::BezierGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:25: warning: Compound Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:64: warning: Compound Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:112: warning: Compound Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:16: warning: Compound Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:25: warning: Compound Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:26: warning: Compound Avogadro::Rendering::EigenData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:35: warning: Compound Avogadro::Rendering::GroupNode::NodeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:38: warning: Compound Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:25: warning: Compound Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:25: warning: Compound Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:28: warning: Compound Avogadro::Rendering::Point is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:42: warning: Compound Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:21: warning: Compound Avogadro::Rendering::ShaderInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:12: warning: Compound Avogadro::Rendering::SolidPipeline is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:92: warning: Compound Avogadro::Rendering::Sphere is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:17: warning: Compound Avogadro::Rendering::SphereColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:26: warning: Compound Avogadro::TypeTraits is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:37: warning: Compound Avogadro::TypeTraits< char > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:114: warning: Compound Avogadro::TypeTraits< double > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:103: warning: Compound Avogadro::TypeTraits< float > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:81: warning: Compound Avogadro::TypeTraits< int > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:59: warning: Compound Avogadro::TypeTraits< short > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:48: warning: Compound Avogadro::TypeTraits< unsigned char > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:92: warning: Compound Avogadro::TypeTraits< unsigned int > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:70: warning: Compound Avogadro::TypeTraits< unsigned short > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:14: warning: Compound Avogadro::VTK::ChartDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:24: warning: Compound Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h:14: warning: Compound Avogadro::VTK::QVTKWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h:38: warning: Compound Avogadro::VTK::vtkGLWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:217: warning: no matching class member found for template < Molecule_T > BondTemplate< Molecule_T >::AtomType getOtherAtom(Avogadro::Core::BondTemplate< Molecule_T >::Molecule_T::AtomType atom) const Possible candidates: 'AtomType BondTemplate< Molecule_T >::getOtherAtom(Index index) const' at line 99 of file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h 'AtomType BondTemplate< Molecule_T >::getOtherAtom(AtomType atom) const' at line 104 of file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:35: warning: Member override (variable) of class vtkAvogadroActor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:62: warning: Member m_scene (variable) of class vtkAvogadroActor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:63: warning: Member m_bounds[6] (variable) of class vtkAvogadroActor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:65: warning: Member m_initialized (variable) of class vtkAvogadroActor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:32: warning: Member points[8] (variable) of struct Avogadro::Frustrum is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:33: warning: Member planes[4] (variable) of struct Avogadro::Frustrum is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:33: warning: Member name() (function) of class Avogadro::TypeTraits is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:44: warning: Member name() (function) of class Avogadro::TypeTraits< char > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:121: warning: Member name() (function) of class Avogadro::TypeTraits< double > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:110: warning: Member name() (function) of class Avogadro::TypeTraits< float > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:88: warning: Member name() (function) of class Avogadro::TypeTraits< int > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:66: warning: Member name() (function) of class Avogadro::TypeTraits< short > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:55: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned char > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:99: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned int > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:77: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned short > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.h:97: warning: Member nameForModel(const std::string &identifier) const (function) of class Avogadro::Calc::ChargeManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:83: warning: Member partialCharges(Core::Molecule &mol) const =0 (function) of class Avogadro::Calc::ChargeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: argument 'array' of command @param is not found in the argument list of ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: The following parameter of Avogadro::Calc::ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const is not documented: parameter 'points' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h:35: warning: Member DefaultModel(const std::string &identifier="") (function) of class Avogadro::Calc::DefaultModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h:80: warning: Member m_identifier (variable) of class Avogadro::Calc::DefaultModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h:81: warning: Member m_elements (variable) of class Avogadro::Calc::DefaultModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h:118: warning: Member m_mask (variable) of class Avogadro::Calc::EnergyCalculator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:42: warning: Member value(const Eigen::VectorXd &x) override (function) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:43: warning: Member gradient(const Eigen::VectorXd &x, Eigen::VectorXd &grad) override (function) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:51: warning: Member m_molecule (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:52: warning: Member m_cell (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:53: warning: Member m_radii (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:54: warning: Member m_vdw (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:55: warning: Member m_depth (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:56: warning: Member m_exponent (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:58: warning: Member m_elements (variable) of class Avogadro::Calc::LennardJones is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h:118: warning: Member m_mask (variable) of class Avogadro::Calc::EnergyCalculator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:21: warning: Member Angle (typedef) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:21: warning: Member Dihedral (typedef) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:15: warning: Member AtomHybridization (enumeration) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:32: warning: Member AtomicNumber (enumeration) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:381: warning: Member operator==(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:388: warning: Member operator!=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:394: warning: Member operator<(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:401: warning: Member operator>(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:407: warning: Member operator<=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:413: warning: Member operator>=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:419: warning: Member swap(Array< T > &lhs, Array< T > &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avogadrocore.h:63: warning: Member isCustomElement(unsigned char atomicNumber) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:59: warning: Member ALAData("ALA", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HB3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:88: warning: Member CYSData("CYS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "SG", 16 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HG", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "SG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "SG", "HG" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:119: warning: Member ASPData("ASP", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OD1", 8 }, { "OD2", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD2", 1 }, { "HD2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "OD2" }, { "OD2", "HD2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "OD1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:153: warning: Member GLUData("GLU", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE1", 8 }, { "OE2", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "OE2" }, { "OE2", "HE2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CD", "OE1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:193: warning: Member PHEData("PHE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HZ", 1 }, { "HZ", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "HZ" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:223: warning: Member GLYData("GLY", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA2", 1 }, { "HA3", 1 }, { "HA3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "HA2" }, { "CA", "HA3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:246: warning: Member HISData("HIS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "ND1", 7 }, { "CD2", 6 }, { "CE1", 6 }, { "NE2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "ND1" }, { "ND1", "HD1" }, { "CD2", "NE2" }, { "CD2", "HD2" }, { "CE1", "NE2" }, { "CE1", "HE1" }, { "NE2", "HE2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD2" }, { "ND1", "CE1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:275: warning: Member ILEData("ILE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG1", 6 }, { "CG2", 6 }, { "CD1", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG12", 1 }, { "HG13", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HD11", 1 }, { "HD12", 1 }, { "HD13", 1 }, { "HD13", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "CG1", "CD1" }, { "CG1", "HG12" }, { "CG1", "HG13" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "CD1", "HD11" }, { "CD1", "HD12" }, { "CD1", "HD13" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:291: warning: Member LYSData("LYS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "CE", 6 }, { "NZ", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HZ1", 1 }, { "HZ2", 1 }, { "HZ3", 1 }, { "HZ3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "CE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "CE", "NZ" }, { "CE", "HE2" }, { "CE", "HE3" }, { "NZ", "HZ1" }, { "NZ", "HZ2" }, { "NZ", "HZ3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:308: warning: Member LEUData("LEU", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HD11", 1 }, { "HD12", 1 }, { "HD13", 1 }, { "HD21", 1 }, { "HD22", 1 }, { "HD23", 1 }, { "HD23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD1" }, { "CG", "CD2" }, { "CG", "HG" }, { "CD1", "HD11" }, { "CD1", "HD12" }, { "CD1", "HD13" }, { "CD2", "HD21" }, { "CD2", "HD22" }, { "CD2", "HD23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:324: warning: Member METData("MET", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "CE", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HE3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "SD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "SD", "CE" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:352: warning: Member ASNData("ASN", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OD1", 8 }, { "ND2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD21", 1 }, { "HD22", 1 }, { "HD22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "ND2" }, { "ND2", "HD21" }, { "ND2", "HD22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "OD1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:388: warning: Member PROData("PRO", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OXT", 8 }, { "H", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HD3", 1 } }, { { "N", "CA" }, { "N", "CD" }, { "N", "H" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "HD2" }, { "CD", "HD3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:426: warning: Member GLNData("GLN", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE1", 8 }, { "NE2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE21", 1 }, { "HE22", 1 }, { "HE22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "NE2" }, { "NE2", "HE21" }, { "NE2", "HE22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CD", "OE1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:453: warning: Member ARGData("ARG", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "NE", 7 }, { "CZ", 6 }, { "NH1", 7 }, { "NH2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE", 1 }, { "HH11", 1 }, { "HH12", 1 }, { "HH21", 1 }, { "HH22", 1 }, { "HH22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "NE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "NE", "CZ" }, { "NE", "HE" }, { "CZ", "NH1" }, { "NH1", "HH11" }, { "NH1", "HH12" }, { "NH2", "HH21" }, { "NH2", "HH22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CZ", "NH2" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:471: warning: Member SERData("SER", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OG", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HG", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "OG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OG", "HG" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:502: warning: Member THRData("THR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OG1", 8 }, { "CG2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG1", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HG23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "OG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "OG1", "HG1" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:539: warning: Member VALData("VAL", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG1", 6 }, { "CG2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG11", 1 }, { "HG12", 1 }, { "HG13", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HG23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "CG1", "HG11" }, { "CG1", "HG12" }, { "CG1", "HG13" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:580: warning: Member TRPData("TRP", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "NE1", 7 }, { "CE2", 6 }, { "CE3", 6 }, { "CZ2", 6 }, { "CZ3", 6 }, { "CH2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HE1", 1 }, { "HE3", 1 }, { "HZ2", 1 }, { "HZ3", 1 }, { "HH2", 1 }, { "HH2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "NE1" }, { "CD1", "HD1" }, { "CD2", "CE3" }, { "NE1", "CE2" }, { "NE1", "HE1" }, { "CE2", "CZ2" }, { "CE3", "HE3" }, { "CZ2", "HZ2" }, { "CZ3", "CH2" }, { "CZ3", "HZ3" }, { "CH2", "HH2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE3", "CZ3" }, { "CZ2", "CH2" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:602: warning: Member TYRData("TYR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OH", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HH", 1 }, { "HH", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "OH" }, { "OH", "HH" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:618: warning: Member DAData("DA", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H61", 1 }, { "H62", 1 }, { "H62", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "H61" }, { "N6", "H62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:645: warning: Member DCData("DC", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H41", 1 }, { "H42", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "C4", "N4" }, { "C4", "C5" }, { "N4", "H41" }, { "N4", "H42" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "N3", "C4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:666: warning: Member DGData("DG", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H21", 1 }, { "H21", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "N2" }, { "N2", "H21" }, { "N2", "H22" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:693: warning: Member DTData("DT", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "C7", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H3", 1 }, { "H71", 1 }, { "H72", 1 }, { "H73", 1 }, { "H73", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "H3" }, { "C4", "C5" }, { "C5", "C7" }, { "C7", "H71" }, { "C7", "H72" }, { "C7", "H73" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "C4", "O4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:716: warning: Member DIData("DI", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H1", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:741: warning: Member AData("A", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H61", 1 }, { "H62", 1 }, { "H62", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "H61" }, { "N6", "H62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:768: warning: Member CData("C", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H41", 1 }, { "H42", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "C4", "N4" }, { "C4", "C5" }, { "N4", "H41" }, { "N4", "H42" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "N3", "C4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:789: warning: Member GData("G", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H21", 1 }, { "H21", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "N2" }, { "N2", "H21" }, { "N2", "H22" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:816: warning: Member UData("U", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H3", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "H3" }, { "C4", "C5" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "C4", "O4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:837: warning: Member IData("I", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H1", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:864: warning: Member HEMData("HEM", { { "CHA", 6 }, { "CHB", 6 }, { "CHC", 6 }, { "CHD", 6 }, { "C1A", 6 }, { "C2A", 6 }, { "C3A", 6 }, { "C4A", 6 }, { "CMA", 6 }, { "CAA", 6 }, { "CBA", 6 }, { "CGA", 6 }, { "O1A", 8 }, { "O2A", 8 }, { "C1B", 6 }, { "C2B", 6 }, { "C3B", 6 }, { "C4B", 6 }, { "CMB", 6 }, { "CAB", 6 }, { "CBB", 6 }, { "C1C", 6 }, { "C2C", 6 }, { "C3C", 6 }, { "C4C", 6 }, { "CMC", 6 }, { "CAC", 6 }, { "CBC", 6 }, { "C1D", 6 }, { "C2D", 6 }, { "C3D", 6 }, { "C4D", 6 }, { "CMD", 6 }, { "CAD", 6 }, { "CBD", 6 }, { "CGD", 6 }, { "O1D", 8 }, { "O2D", 8 }, { "NA", 7 }, { "NB", 7 }, { "NC", 7 }, { "ND", 7 }, { "FE", 26 }, { "HHB", 1 }, { "HHC", 1 }, { "HHD", 1 }, { "HMA", 1 }, { "HMAA", 1 }, { "HMAB", 1 }, { "HAA", 1 }, { "HAAA", 1 }, { "HBA", 1 }, { "HBAA", 1 }, { "HMB", 1 }, { "HMBA", 1 }, { "HMBB", 1 }, { "HAB", 1 }, { "HBB", 1 }, { "HBBA", 1 }, { "HMC", 1 }, { "HMCA", 1 }, { "HMCB", 1 }, { "HAC", 1 }, { "HBC", 1 }, { "HBCA", 1 }, { "HMD", 1 }, { "HMDA", 1 }, { "HMDB", 1 }, { "HAD", 1 }, { "HADA", 1 }, { "HBD", 1 }, { "HBDA", 1 }, { "H2A", 1 }, { "H2D", 1 }, { "H2D", 1 } }, { { "CHA", "C1A" }, { "CHA", "HHA" }, { "CHB", "C4A" }, { "CHB", "HHB" }, { "CHC", "C4B" }, { "CHC", "HHC" }, { "CHD", "C1D" }, { "CHD", "HHD" }, { "C1A", "NA" }, { "C2A", "C3A" }, { "C2A", "CAA" }, { "C3A", "CMA" }, { "C4A", "NA" }, { "CMA", "HMA" }, { "CMA", "HMAA" }, { "CMA", "HMAB" }, { "CAA", "CBA" }, { "CAA", "HAA" }, { "CAA", "HAAA" }, { "CBA", "CGA" }, { "CBA", "HBA" }, { "CBA", "HBAA" }, { "CGA", "O2A" }, { "O2A", "H2A" }, { "C1B", "C2B" }, { "C1B", "NB" }, { "C2B", "CMB" }, { "C3B", "C4B" }, { "C3B", "CAB" }, { "CMB", "HMB" }, { "CMB", "HMBA" }, { "CMB", "HMBB" }, { "CAB", "HAB" }, { "CBB", "HBB" }, { "CBB", "HBBA" }, { "C1C", "C2C" }, { "C1C", "NC" }, { "C2C", "CMC" }, { "C3C", "C4C" }, { "C3C", "CAC" }, { "C4C", "NC" }, { "CMC", "HMC" }, { "CMC", "HMCA" }, { "CMC", "HMCB" }, { "CAC", "HAC" }, { "CBC", "HBC" }, { "CBC", "HBCA" }, { "C1D", "C2D" }, { "C2D", "CMD" }, { "C3D", "C4D" }, { "C3D", "CAD" }, { "C4D", "ND" }, { "CMD", "HMD" }, { "CMD", "HMDA" }, { "CMD", "HMDB" }, { "CAD", "CBD" }, { "CAD", "HAD" }, { "CAD", "HADA" }, { "CBD", "CGD" }, { "CBD", "HBD" }, { "CBD", "HBDA" }, { "CGD", "O2D" }, { "O2D", "H2D" }, { "FE", "NA" }, { "FE", "NB" }, { "FE", "NC" }, { "FE", "ND" } }, { { "CHA", "C4D" }, { "CHB", "C1B" }, { "CHC", "C1C" }, { "CHD", "C4C" }, { "C1A", "C2A" }, { "C3A", "C4A" }, { "CGA", "O1A" }, { "C2B", "C3B" }, { "C4B", "NB" }, { "CAB", "CBB" }, { "C2C", "C3C" }, { "CAC", "CBC" }, { "C1D", "ND" }, { "C2D", "C3D" }, { "CGD", "O1D" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:916: warning: Member HOHData("HOH", { { "O", 8 }, { "H1", 1 }, { "H1", 1 } }, { { "O", "H1" }, { "O", "H2" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:923: warning: Member SO4Data("SO4", { { "S", 16 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O3", 8 } }, { { "S", "O3" }, { "S", "O4" } }, { { "S", "O1" }, { "S", "O2" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:931: warning: Member GOLData("GOL", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "O3", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H2", 1 }, { "HO2", 1 }, { "H31", 1 }, { "H32", 1 }, { "H32", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "C3" }, { "C2", "H2" }, { "O2", "HO2" }, { "C3", "O3" }, { "C3", "H31" }, { "C3", "H32" }, { "O3", "HO3" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:963: warning: Member EDOData("EDO", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "HO2" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:987: warning: Member MSEData("MSE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "SE", 34 }, { "CE", 6 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HXT", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "OXT", "HXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "SE" }, { "CG", "HG2" }, { "CG", "HG3" }, { "SE", "CE" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1015: warning: Member NAGData("NAG", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "N2", 7 }, { "O1", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "O7", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H81", 1 }, { "H82", 1 }, { "H83", 1 }, { "HN2", 1 }, { "HO1", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "N2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "N2" }, { "C8", "H81" }, { "C8", "H82" }, { "C8", "H83" }, { "N2", "HN2" }, { "O1", "HO1" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, { { "C7", "O7" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1035: warning: Member PO4Data("PO4", { { "P", 15 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O3", 8 } }, { { "P", "O2" }, { "P", "O3" }, { "P", "O4" } }, { { "P", "O1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1043: warning: Member ACTData("ACT", { { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CH3", 6 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "OXT" }, { "C", "CH3" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1060: warning: Member PEGData("PEG", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H41", 1 }, { "H42", 1 }, { "H42", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O4" }, { "C4", "H41" }, { "C4", "H42" }, { "O4", "HO4" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1098: warning: Member BMAData("BMA", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1115: warning: Member MANData("MAN", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1132: warning: Member DMSData("DMS", { { "S", 16 }, { "O", 8 }, { "C1", 6 }, { "C2", 6 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "S", "C1" }, { "S", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "H21" }, { "C2", "H22" }, { "C2", "H23" } }, { { "S", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1155: warning: Member ADPData("ADP", { { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOB2", 1 }, { "HOB3", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3B", "HOB3" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1185: warning: Member FADData("FAD", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4X", 6 }, { "N5", 7 }, { "C5X", 6 }, { "C6", 6 }, { "C7", 6 }, { "C7M", 6 }, { "C8", 6 }, { "C8M", 6 }, { "C9", 6 }, { "C9A", 6 }, { "N10", 7 }, { "C10", 6 }, { "C1'", 6 }, { "C2'", 6 }, { "O2'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C4'", 6 }, { "O4'", 8 }, { "C5'", 6 }, { "O5'", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "HN3", 1 }, { "H6", 1 }, { "HM71", 1 }, { "HM72", 1 }, { "HM73", 1 }, { "HM81", 1 }, { "HM82", 1 }, { "HM83", 1 }, { "H9", 1 }, { "H1'1", 1 }, { "H1'2", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H4'", 1 }, { "HO4'", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H5'2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3P" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "N1", "C2" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4X" }, { "C4X", "C10" }, { "N5", "C5X" }, { "C5X", "C9A" }, { "C6", "C7" }, { "C6", "H6" }, { "C7", "C7M" }, { "C7M", "HM71" }, { "C7M", "HM72" }, { "C7M", "HM73" }, { "C8", "C8M" }, { "C8", "C9" }, { "C8M", "HM81" }, { "C8M", "HM82" }, { "C8M", "HM83" }, { "C9", "H9" }, { "C9A", "N10" }, { "N10", "C10" }, { "N10", "C1'" }, { "C1'", "C2'" }, { "C1'", "H1'1" }, { "C1'", "H1'2" }, { "C2'", "O2'" }, { "C2'", "C3'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C3'", "O3'" }, { "C3'", "C4'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C4'", "O4'" }, { "C4'", "C5'" }, { "C4'", "H4'" }, { "O4'", "HO4'" }, { "C5'", "O5'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "O5'", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "N1", "C10" }, { "C2", "O2" }, { "C4", "O4" }, { "C4X", "N5" }, { "C5X", "C6" }, { "C7", "C8" }, { "C9", "C9A" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1241: warning: Member ACEData("ACE", { { "C", 6 }, { "O", 8 }, { "CH3", 6 }, { "H", 1 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "CH3" }, { "C", "H" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1258: warning: Member MPDData("MPD", { { "C1", 6 }, { "C2", 6 }, { "O2", 8 }, { "CM", 6 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "HO2", 1 }, { "HM1", 1 }, { "HM2", 1 }, { "HM3", 1 }, { "H31", 1 }, { "H32", 1 }, { "H4", 1 }, { "HO4", 1 }, { "H51", 1 }, { "H52", 1 }, { "H52", 1 } }, { { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "O2" }, { "C2", "CM" }, { "C2", "C3" }, { "O2", "HO2" }, { "CM", "HM1" }, { "CM", "HM2" }, { "CM", "HM3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O4" }, { "C4", "C5" }, { "C4", "H4" }, { "O4", "HO4" }, { "C5", "H51" }, { "C5", "H52" }, { "C5", "H53" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1276: warning: Member GLCData("GLC", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1293: warning: Member ATPData("ATP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "O3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1326: warning: Member MESData("MES", { { "O1", 8 }, { "C2", 6 }, { "C3", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "S", 16 }, { "O1S", 8 }, { "O2S", 8 }, { "O3S", 8 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "HN4", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H81", 1 } }, { { "O1", "C2" }, { "O1", "C6" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "N4" }, { "C3", "H31" }, { "C3", "H32" }, { "N4", "C5" }, { "N4", "C7" }, { "N4", "HN4" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "S" }, { "C8", "H81" }, { "C8", "H82" }, { "S", "O3S" } }, { { "S", "O1S" }, { "S", "O2S" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1343: warning: Member TRSData("TRS", { { "C", 6 }, { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "N", 7 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "HN1", 1 }, { "HN2", 1 }, { "HN3", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO2", 1 } }, { { "C", "C1" }, { "C", "C2" }, { "C", "C3" }, { "C", "N" }, { "C1", "O1" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "O3" }, { "C3", "H31" }, { "C3", "H32" }, { "N", "HN1" }, { "N", "HN2" }, { "N", "HN3" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1372: warning: Member PG4Data("PG4", { { "O1", 8 }, { "C1", 6 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O3", 8 }, { "C5", 6 }, { "C6", 6 }, { "O4", 8 }, { "C7", 6 }, { "C8", 6 }, { "O5", 8 }, { "HO1", 1 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H41", 1 }, { "H42", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H82", 1 }, { "H82", 1 } }, { { "O1", "C1" }, { "O1", "HO1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O3" }, { "C4", "H41" }, { "C4", "H42" }, { "O3", "C5" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "O4" }, { "C6", "H61" }, { "C6", "H62" }, { "O4", "C7" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "O5" }, { "C8", "H81" }, { "C8", "H82" }, { "O5", "HO5" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1393: warning: Member PGEData("PGE", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "C6", 6 }, { "C5", 6 }, { "O3", 8 }, { "H1", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H2", 1 }, { "H22", 1 }, { "H3", 1 }, { "H32", 1 }, { "H4", 1 }, { "H42", 1 }, { "HO4", 1 }, { "H6", 1 }, { "H62", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H1" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H2" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H3" }, { "C3", "H32" }, { "C4", "O3" }, { "C4", "H4" }, { "C4", "H42" }, { "O4", "C6" }, { "O4", "HO4" }, { "C6", "C5" }, { "C6", "H6" }, { "C6", "H62" }, { "C5", "O3" }, { "C5", "H5" }, { "C5", "H52" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1410: warning: Member NADData("NAD", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H4N", 1 }, { "H5N", 1 }, { "H5N", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "H4N" }, { "C5N", "C6N" }, { "C5N", "H5N" }, { "C6N", "H6N" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "N1N", "C6N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C4N", "C5N" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1457: warning: Member FUCData("FUC", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H63", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO3", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "H61" }, { "C6", "H62" }, { "C6", "H63" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1474: warning: Member NH2Data("NH2", { { "N", 7 }, { "HN1", 1 }, { "HN1", 1 } }, { { "N", "HN1" }, { "N", "HN2" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1481: warning: Member FMTData("FMT", { { "C", 6 }, { "O1", 8 }, { "O2", 8 }, { "H", 1 }, { "H", 1 } }, { { "C", "O2" }, { "C", "H" }, { "O2", "HO2" } }, { { "C", "O1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1489: warning: Member NAPData("NAP", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "P2B", 15 }, { "O1X", 8 }, { "O2X", 8 }, { "O3X", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H4N", 1 }, { "H5N", 1 }, { "H6N", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "P2B" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "H4N" }, { "C5N", "C6N" }, { "C5N", "H5N" }, { "C6N", "H6N" }, { "P2B", "O2X" }, { "P2B", "O3X" }, { "O2X", "HOP2" }, { "O3X", "HOP3" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "N1N", "C6N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C4N", "C5N" }, { "P2B", "O1X" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1539: warning: Member SEPData("SEP", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "OG", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HXT", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "OG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OG", "P" }, { "C", "OXT" }, { "OXT", "HXT" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "C", "O" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1579: warning: Member GDPData("GDP", { { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOB2", 1 }, { "HOB3", 1 }, { "HOA2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3B", "HOB3" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1609: warning: Member GALData("GAL", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1626: warning: Member SF4Data("SF4", { { "FE1", 26 }, { "FE2", 26 }, { "FE3", 26 }, { "FE4", 26 }, { "S1", 16 }, { "S2", 16 }, { "S3", 16 }, { "S3", 16 } }, { { "FE1", "S2" }, { "FE1", "S3" }, { "FE1", "S4" }, { "FE2", "S1" }, { "FE2", "S3" }, { "FE2", "S4" }, { "FE3", "S1" }, { "FE3", "S2" }, { "FE3", "S4" }, { "FE4", "S1" }, { "FE4", "S2" }, { "FE4", "S3" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1651: warning: Member BGCData("BGC", { { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "C1", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H1", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C2", "C3" }, { "C2", "C1" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1668: warning: Member FMNData("FMN", { { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4A", 6 }, { "N5", 7 }, { "C5A", 6 }, { "C6", 6 }, { "C7", 6 }, { "C7M", 6 }, { "C8", 6 }, { "C8M", 6 }, { "C9", 6 }, { "C9A", 6 }, { "N10", 7 }, { "C10", 6 }, { "C1'", 6 }, { "C2'", 6 }, { "O2'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C4'", 6 }, { "O4'", 8 }, { "C5'", 6 }, { "O5'", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "HN3", 1 }, { "H6", 1 }, { "HM71", 1 }, { "HM72", 1 }, { "HM73", 1 }, { "HM81", 1 }, { "HM82", 1 }, { "HM83", 1 }, { "H9", 1 }, { "H1'1", 1 }, { "H1'2", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H4'", 1 }, { "HO4'", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N1", "C2" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4A" }, { "C4A", "C10" }, { "N5", "C5A" }, { "C5A", "C9A" }, { "C6", "C7" }, { "C6", "H6" }, { "C7", "C7M" }, { "C7M", "HM71" }, { "C7M", "HM72" }, { "C7M", "HM73" }, { "C8", "C8M" }, { "C8", "C9" }, { "C8M", "HM81" }, { "C8M", "HM82" }, { "C8M", "HM83" }, { "C9", "H9" }, { "C9A", "N10" }, { "N10", "C10" }, { "N10", "C1'" }, { "C1'", "C2'" }, { "C1'", "H1'1" }, { "C1'", "H1'2" }, { "C2'", "O2'" }, { "C2'", "C3'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C3'", "O3'" }, { "C3'", "C4'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C4'", "O4'" }, { "C4'", "C5'" }, { "C4'", "H4'" }, { "O4'", "HO4'" }, { "C5'", "O5'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "O5'", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "N1", "C10" }, { "C2", "O2" }, { "C4", "O4" }, { "C4A", "N5" }, { "C5A", "C6" }, { "C7", "C8" }, { "C9", "C9A" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1704: warning: Member UNKData("UNK", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HG3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "HG1" }, { "CG", "HG2" }, { "CG", "HG3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1739: warning: Member CITData("CIT", { { "C1", 6 }, { "O1", 8 }, { "O2", 8 }, { "C2", 6 }, { "C3", 6 }, { "O7", 8 }, { "C4", 6 }, { "C5", 6 }, { "O3", 8 }, { "O4", 8 }, { "C6", 6 }, { "O5", 8 }, { "O6", 8 }, { "HO2", 1 }, { "H21", 1 }, { "H22", 1 }, { "HO7", 1 }, { "H41", 1 }, { "H42", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "O2" }, { "C1", "C2" }, { "O2", "HO2" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "O7" }, { "C3", "C4" }, { "C3", "C6" }, { "O7", "HO7" }, { "C4", "C5" }, { "C4", "H41" }, { "C4", "H42" }, { "C5", "O4" }, { "O4", "HO4" }, { "C6", "O6" }, { "O6", "HO6" } }, { { "C1", "O1" }, { "C5", "O3" }, { "C6", "O5" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1767: warning: Member EPEData("EPE", { { "N1", 7 }, { "C2", 6 }, { "C3", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "O8", 8 }, { "C9", 6 }, { "C10", 6 }, { "S", 16 }, { "O1S", 8 }, { "O2S", 8 }, { "O3S", 8 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H82", 1 }, { "HO8", 1 }, { "H91", 1 }, { "H92", 1 }, { "H101", 1 }, { "H102", 1 }, { "H102", 1 } }, { { "N1", "C2" }, { "N1", "C6" }, { "N1", "C9" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "N4" }, { "C3", "H31" }, { "C3", "H32" }, { "N4", "C5" }, { "N4", "C7" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "O8" }, { "C8", "H81" }, { "C8", "H82" }, { "O8", "HO8" }, { "C9", "C10" }, { "C9", "H91" }, { "C9", "H92" }, { "C10", "S" }, { "C10", "H101" }, { "C10", "H102" }, { "S", "O3S" }, { "O3S", "HOS3" } }, { { "S", "O1S" }, { "S", "O2S" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1788: warning: Member TPOData("TPO", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG2", 6 }, { "OG1", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HOP2", 1 }, { "HOP3", 1 }, { "HOP3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG2" }, { "CB", "OG1" }, { "CB", "HB" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OG1", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "P", "O1P" }, { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1818: warning: Member PLPData("PLP", { { "N1", 7 }, { "C2", 6 }, { "C2A", 6 }, { "C3", 6 }, { "O3", 8 }, { "C4", 6 }, { "C4A", 6 }, { "O4A", 8 }, { "C5", 6 }, { "C6", 6 }, { "C5A", 6 }, { "O4P", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H2A1", 1 }, { "H2A2", 1 }, { "H2A3", 1 }, { "HO3", 1 }, { "H4A", 1 }, { "H6", 1 }, { "H5A1", 1 }, { "H5A2", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N1", "C6" }, { "C2", "C2A" }, { "C2", "C3" }, { "C2A", "H2A1" }, { "C2A", "H2A2" }, { "C2A", "H2A3" }, { "C3", "O3" }, { "O3", "HO3" }, { "C4", "C4A" }, { "C4", "C5" }, { "C4A", "H4A" }, { "C5", "C5A" }, { "C6", "H6" }, { "C5A", "O4P" }, { "C5A", "H5A1" }, { "C5A", "H5A2" }, { "O4P", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "N1", "C2" }, { "C3", "C4" }, { "C4A", "O4A" }, { "C5", "C6" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1840: warning: Member GTPData("GTP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "O3B", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "O3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "O3B", "PB" }, { "PB", "O2B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1873: warning: Member SAHData("SAH", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HN1", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HXT", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "N", "CA" }, { "N", "HN1" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "SD" }, { "CG", "HG1" }, { "CG", "HG2" }, { "SD", "C5'" }, { "C", "OXT" }, { "OXT", "HXT" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "C", "O" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1904: warning: Member BMEData("BME", { { "C1", 6 }, { "C2", 6 }, { "O1", 8 }, { "S2", 16 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "HO1", 1 }, { "HO1", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "S2" }, { "C2", "H21" }, { "C2", "H22" }, { "O1", "HO1" }, { "S2", "HS2" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1928: warning: Member ACYData("ACY", { { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CH3", 6 }, { "HXT", 1 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "OXT" }, { "C", "CH3" }, { "OXT", "HXT" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1947: warning: Member ANPData("ANP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "N3B", 7 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HNB1", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "N3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "PB", "O2B" }, { "PB", "N3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "N3B", "HNB1" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1980: warning: Member IMDData("IMD", { { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "C5", 6 }, { "HN1", 1 }, { "H2", 1 }, { "HN3", 1 }, { "H4", 1 }, { "H4", 1 } }, { { "N1", "C2" }, { "N1", "C5" }, { "N1", "HN1" }, { "C2", "H2" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "H4" }, { "C5", "H5" } }, { { "C2", "N3" }, { "C4", "C5" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2003: warning: Member PCAData("PCA", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HG3", 1 } }, { { "N", "CA" }, { "N", "CD" }, { "N", "H" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "CD", "OE" }, { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2038: warning: Member CSOData("CSO", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "SG", 16 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "OD", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HXT", 1 }, { "HXT", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "SG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "SG", "OD" }, { "C", "OXT" }, { "OXT", "HXT" }, { "OD", "HD" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2071: warning: Member MLIData("MLI", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "O6", 8 }, { "O7", 8 }, { "O8", 8 }, { "O9", 8 }, { "H11", 1 }, { "H11", 1 } }, { { "C1", "C2" }, { "C1", "C3" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O7" }, { "C3", "O9" } }, { { "C2", "O6" }, { "C3", "O8" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2091: warning: Member FESData("FES", { { "FE1", 26 }, { "FE2", 26 }, { "S1", 16 }, { "S1", 16 } }, { { "FE1", "S1" }, { "FE1", "S2" }, { "FE2", "S1" }, { "FE2", "S2" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2100: warning: Member NDPData("NDP", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "P2B", 15 }, { "O1X", 8 }, { "O2X", 8 }, { "O3X", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H21N", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H41N", 1 }, { "H42N", 1 }, { "H5N", 1 }, { "H6N", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "P2B" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O2N", "H21N" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "N1N", "C6N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "C5N" }, { "C4N", "H41N" }, { "C4N", "H42N" }, { "C5N", "H5N" }, { "C6N", "H6N" }, { "P2B", "O2X" }, { "P2B", "O3X" }, { "O2X", "HOP2" }, { "O3X", "HOP3" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C5N", "C6N" }, { "P2B", "O1X" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2155: warning: Member AMPData("AMP", { { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP2", 1 }, { "HOP3", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "P", "O2P" }, { "P", "O3P" }, { "P", "O5'" }, { "O2P", "HOP2" }, { "O3P", "HOP3" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "O1P" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2182: warning: Member NO3Data("NO3", { { "N", 7 }, { "O1", 8 }, { "O2", 8 }, { "O2", 8 } }, { { "N", "O2" }, { "N", "O3" } }, { { "N", "O1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2189: warning: Member PTRData("PTR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OH", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HXT", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HO2P", 1 }, { "HO2P", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "OXT", "HXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "OH" }, { "OH", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HO2P" }, { "O3P", "HO3P" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2211: warning: Member IPAData("IPA", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "O2", 8 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "H2", 1 }, { "H31", 1 }, { "H32", 1 }, { "H33", 1 }, { "H33", 1 } }, { { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "H31" }, { "C3", "H32" }, { "C3", "H33" }, { "O2", "HO2" } }, {}) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2239: warning: Member COAData("COA", { { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N7A", 7 }, { "C8A", 6 }, { "N9A", 7 }, { "C1B", 6 }, { "C2B", 6 }, { "O2B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "P3B", 15 }, { "O7A", 8 }, { "O8A", 8 }, { "O9A", 8 }, { "C4B", 6 }, { "O4B", 8 }, { "C5B", 6 }, { "O5B", 8 }, { "P1A", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "P2A", 15 }, { "O4A", 8 }, { "O5A", 8 }, { "O6A", 8 }, { "CBP", 6 }, { "CCP", 6 }, { "CDP", 6 }, { "CEP", 6 }, { "CAP", 6 }, { "OAP", 8 }, { "C9P", 6 }, { "O9P", 8 }, { "N8P", 7 }, { "C7P", 6 }, { "C6P", 6 }, { "C5P", 6 }, { "O5P", 8 }, { "N4P", 7 }, { "C3P", 6 }, { "C2P", 6 }, { "S1P", 16 }, { "H2A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H8A", 1 }, { "H1B", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H3B", 1 }, { "HOA8", 1 }, { "HOA9", 1 }, { "H4B", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "HOA2", 1 }, { "HOA5", 1 }, { "H121", 1 }, { "H122", 1 }, { "H131", 1 }, { "H132", 1 }, { "H133", 1 }, { "H141", 1 }, { "H142", 1 }, { "H143", 1 }, { "H10", 1 }, { "HO1", 1 }, { "HN8", 1 }, { "H71", 1 }, { "H72", 1 }, { "H61", 1 }, { "H62", 1 }, { "HN4", 1 }, { "H31", 1 }, { "H32", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "C4A", "N9A" }, { "C5A", "C6A" }, { "C5A", "N7A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "C8A", "N9A" }, { "C8A", "H8A" }, { "N9A", "C1B" }, { "C1B", "C2B" }, { "C1B", "O4B" }, { "C1B", "H1B" }, { "C2B", "O2B" }, { "C2B", "C3B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C3B", "O3B" }, { "C3B", "C4B" }, { "C3B", "H3B" }, { "O3B", "P3B" }, { "P3B", "O8A" }, { "P3B", "O9A" }, { "O8A", "HOA8" }, { "O9A", "HOA9" }, { "C4B", "O4B" }, { "C4B", "C5B" }, { "C4B", "H4B" }, { "C5B", "O5B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "O5B", "P1A" }, { "P1A", "O2A" }, { "P1A", "O3A" }, { "O2A", "HOA2" }, { "O3A", "P2A" }, { "P2A", "O5A" }, { "P2A", "O6A" }, { "O5A", "HOA5" }, { "O6A", "CCP" }, { "CBP", "CCP" }, { "CBP", "CDP" }, { "CBP", "CEP" }, { "CBP", "CAP" }, { "CCP", "H121" }, { "CCP", "H122" }, { "CDP", "H131" }, { "CDP", "H132" }, { "CDP", "H133" }, { "CEP", "H141" }, { "CEP", "H142" }, { "CEP", "H143" }, { "CAP", "OAP" }, { "CAP", "C9P" }, { "CAP", "H10" }, { "OAP", "HO1" }, { "C9P", "N8P" }, { "N8P", "C7P" }, { "N8P", "HN8" }, { "C7P", "C6P" }, { "C7P", "H71" }, { "C7P", "H72" }, { "C6P", "C5P" }, { "C6P", "H61" }, { "C6P", "H62" }, { "C5P", "N4P" }, { "N4P", "C3P" }, { "N4P", "HN4" }, { "C3P", "C2P" }, { "C3P", "H31" }, { "C3P", "H32" }, { "C2P", "S1P" }, { "C2P", "H21" }, { "C2P", "H22" }, { "S1P", "HS1" } }, { { "N1A", "C6A" }, { "C2A", "N3A" }, { "C4A", "C5A" }, { "N7A", "C8A" }, { "P3B", "O7A" }, { "P1A", "O1A" }, { "P2A", "O4A" }, { "C9P", "O9P" }, { "C5P", "O5P" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2290: warning: Member KCXData("KCX", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "CE", 6 }, { "NZ", 7 }, { "C", 6 }, { "O", 8 }, { "CX", 6 }, { "OXT", 8 }, { "OQ1", 8 }, { "OQ2", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HZ", 1 }, { "HXT", 1 }, { "HXT", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "CE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "CE", "NZ" }, { "CE", "HE2" }, { "CE", "HE3" }, { "NZ", "CX" }, { "NZ", "HZ" }, { "C", "OXT" }, { "CX", "OQ2" }, { "OXT", "HXT" }, { "OQ2", "HQ2" } }, { { "C", "O" }, { "CX", "OQ1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2308: warning: Member H4BData("H4B", { { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4A", 6 }, { "C8A", 6 }, { "N5", 7 }, { "N8", 7 }, { "C6", 6 }, { "C7", 6 }, { "C9", 6 }, { "O9", 8 }, { "C10", 6 }, { "C11", 6 }, { "O10", 8 }, { "HN21", 1 }, { "HN22", 1 }, { "HN3", 1 }, { "HN5", 1 }, { "HN8", 1 }, { "H6", 1 }, { "H71", 1 }, { "H72", 1 }, { "H9", 1 }, { "HO9", 1 }, { "H10", 1 }, { "H111", 1 }, { "H112", 1 }, { "H113", 1 }, { "H113", 1 } }, { { "N1", "C8A" }, { "C2", "N2" }, { "C2", "N3" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4A" }, { "C4A", "N5" }, { "C8A", "N8" }, { "N5", "C6" }, { "N5", "HN5" }, { "N8", "C7" }, { "N8", "HN8" }, { "C6", "C7" }, { "C6", "C9" }, { "C6", "H6" }, { "C7", "H71" }, { "C7", "H72" }, { "C9", "O9" }, { "C9", "C10" }, { "C9", "H9" }, { "O9", "HO9" }, { "C10", "C11" }, { "C10", "O10" }, { "C10", "H10" }, { "C11", "H111" }, { "C11", "H112" }, { "C11", "H113" }, { "O10", "HO0" } }, { { "N1", "C2" }, { "C4", "O4" }, { "C4A", "C8A" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2329: warning: Member SAMData("SAM", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "CE", 6 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HN1", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "N", "CA" }, { "N", "HN1" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "SD" }, { "CG", "HG1" }, { "CG", "HG2" }, { "SD", "CE" }, { "SD", "C5'" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "C", "O" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2361: warning: Member GNPData("GNP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "N3B", 7 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HNB3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'2", 1 }, { "H5'1", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "N3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "N3B", "PB" }, { "N3B", "HNB3" }, { "PB", "O2B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'2" }, { "C5'", "H5'1" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2394: warning: Member FLCData("FLC", { { "CAC", 6 }, { "CA", 6 }, { "CB", 6 }, { "CBC", 6 }, { "CG", 6 }, { "CGC", 6 }, { "OA1", 8 }, { "OA2", 8 }, { "OB1", 8 }, { "OB2", 8 }, { "OG1", 8 }, { "OG2", 8 }, { "OHB", 8 }, { "HA1", 1 }, { "HA2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HG2", 1 } }, { { "CAC", "CA" }, { "CAC", "OA2" }, { "CA", "CB" }, { "CA", "HA1" }, { "CA", "HA2" }, { "CB", "CBC" }, { "CB", "CG" }, { "CB", "OHB" }, { "CBC", "OB2" }, { "CG", "CGC" }, { "CG", "HG1" }, { "CG", "HG2" }, { "CGC", "OG2" }, { "OHB", "HOB" } }, { { "CAC", "OA1" }, { "CBC", "OB1" }, { "CGC", "OG1" } }) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:194: warning: Member swap(UnitCell &lhs, UnitCell &rhs) (function) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:7: warning: Member element_symbols[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:20: warning: Member element_names[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:47: warning: Member element_masses[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:71: warning: Member valence_electrons[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:83: warning: Member element_VDW[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:226: warning: Member element_covalent[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:267: warning: Member element_color[][3] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:7: warning: Member chain_color[][3] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:25: warning: Member amino_color[][3] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:41: warning: Member shapely_color[][3] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:57: warning: Member secondary_color[][3] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2431: warning: Member residueDict (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:16: warning: Member space_group_international_number[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:55: warning: Member space_group_schoenflies[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:134: warning: Member space_group_hall_symbol[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:666: warning: Member space_group_international[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1198: warning: Member space_group_international_full[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1730: warning: Member space_group_international_short[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1822: warning: Member space_group_setting[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1884: warning: Member space_group_transforms[] (variable) of namespace Avogadro::Core is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:33: warning: Member operator*() (function) of class Avogadro::Core::AngleIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:37: warning: Member begin() (function) of class Avogadro::Core::AngleIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:39: warning: Member end() const (function) of class Avogadro::Core::AngleIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:43: warning: Member operator++() (function) of class Avogadro::Core::AngleIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:45: warning: Member operator!=(const AngleIterator &other) (function) of class Avogadro::Core::AngleIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:96: warning: Member Container (typedef) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:99: warning: Member ValueType (typedef) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:119: warning: Member Array(const size_t n, const ValueType &value=ValueType()) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:124: warning: Member Array(InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:156: warning: Member data() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:158: warning: Member constData() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:160: warning: Member size() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:162: warning: Member max_size() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:164: warning: Member empty() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:166: warning: Member capacity() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:168: warning: Member reserve(const size_t &sz) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:174: warning: Member resize(const size_t &sz, const ValueType &t=ValueType()) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:180: warning: Member clear() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:186: warning: Member begin() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:188: warning: Member end() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:190: warning: Member begin() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:196: warning: Member end() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:202: warning: Member rbegin() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:204: warning: Member rend() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:206: warning: Member rbegin() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:212: warning: Member rend() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:218: warning: Member front() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:224: warning: Member front() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:226: warning: Member back() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:232: warning: Member back() const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:235: warning: Member assign(InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:241: warning: Member assign(size_type n, const value_type &val) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:247: warning: Member push_back(const ValueType &v) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:253: warning: Member pop_back() (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:259: warning: Member insert(iterator position, const value_type &val) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:265: warning: Member insert(iterator position, size_type n, const value_type &val) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:272: warning: Member insert(iterator position, InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:278: warning: Member erase(iterator position) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:284: warning: Member erase(iterator first, iterator last) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:290: warning: Member operator[](const std::size_t &idx) const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:295: warning: Member operator[](const std::size_t &idx) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:301: warning: Member at(const std::size_t &idx) const (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:304: warning: Member operator=(const std::vector< OtherT > &v) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:312: warning: Member operator=(const Array< OtherT > &v) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:319: warning: Member operator=(const Array &v) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:328: warning: Member swap(Array< ValueType > &other) (function) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:351: warning: Member d (variable) of class Avogadro::Core::Array is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:71: warning: Member m_content (variable) of class Avogadro::Core::ArraySet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:72: warning: Member m_data (variable) of class Avogadro::Core::ArraySet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:62: warning: Member Holder(const ValueType &value) (function) of class Avogadro::Core::ArraySet::Holder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:64: warning: Member type() const (function) of class Avogadro::Core::ArraySet::Holder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:66: warning: Member clone() const (function) of class Avogadro::Core::ArraySet::Holder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:68: warning: Member m_content (variable) of class Avogadro::Core::ArraySet::Holder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:53: warning: Member type() const =0 (function) of class Avogadro::Core::ArraySet::PlaceHolder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:55: warning: Member clone() const =0 (function) of class Avogadro::Core::ArraySet::PlaceHolder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:801: warning: Member Atom(Molecule *m, Index i) (function) of class Avogadro::Core::Atom is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:176: warning: Member selected() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:187: warning: Member label() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:117: warning: Member atomicNumber() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:128: warning: Member position2d() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:136: warning: Member position3d() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:144: warning: Member hybridization() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:152: warning: Member formalCharge() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:160: warning: Member color() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:168: warning: Member layer() const (function) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class AtomTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:44: warning: explicit link request to 'AtomType' could not be resolved /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class Avogadro::Core::AtomTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:176: warning: Member selected() const (function) of class Avogadro::Core::AtomTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class Avogadro::Core::AtomTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class Avogadro::Core::AtomTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:187: warning: Member label() const (function) of class Avogadro::Core::AtomTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class Avogadro::Core::AtomTyper is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::AtomTyper is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:808: warning: Member Bond(Molecule *m, Index i) (function) of class Avogadro::Core::Bond is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:93: warning: Member atom2() const (function) of class BondTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:111: warning: Member order() const (function) of class BondTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class BondTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class BondTemplate< Molecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:20: warning: explicit link request to 'BondType' could not be resolved /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class Avogadro::Core::BondTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class Avogadro::Core::BondTemplate is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/color3f.h:84: warning: Member m_data[3] (variable) of class Avogadro::Core::Color3f is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:40: warning: Member setMolecule(const Molecule *mol) (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:41: warning: Member molecule() const (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:83: warning: Member specification() const (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:92: warning: Member resize(Index _size) (function) of class Avogadro::Core::CoordinateSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:93: warning: Member size() const (function) of class Avogadro::Core::CoordinateSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:94: warning: Member coordinates() (function) of class Avogadro::Core::CoordinateSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:95: warning: Member coordinates() const (function) of class Avogadro::Core::CoordinateSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:100: warning: Member operator[](Index _index) (function) of class Avogadro::Core::CoordinateSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:101: warning: Member operator[](Index _index) const (function) of class Avogadro::Core::CoordinateSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:71: warning: Member m_content (variable) of class Avogadro::Core::ArraySet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:72: warning: Member m_data (variable) of class Avogadro::Core::ArraySet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:98: warning: Found unknown command '\index' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:40: warning: Member Options (typedef) of class Avogadro::Core::CrystalTools is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:50: warning: The following parameter of Avogadro::Core::CrystalTools::rotateToStandardOrientation(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:65: warning: The following parameters of Avogadro::Core::CrystalTools::setVolume(Molecule &molecule, Real newVolume, Options opts=None) are not documented: parameter 'molecule' parameter 'newVolume' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:75: warning: The following parameter of Avogadro::Core::CrystalTools::niggliReduce(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:97: warning: The following parameter of Avogadro::Core::CrystalTools::buildSupercell(Molecule &molecule, unsigned int a, unsigned int b, unsigned int c) is not documented: parameter 'molecule' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:109: warning: The following parameters of Avogadro::Core::CrystalTools::setCellMatrix(Molecule &molecule, const Matrix3 &newCellColMatrix, Options opt=None) are not documented: parameter 'molecule' parameter 'newCellColMatrix' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:124: warning: Member data() const (function) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:227: warning: Member setName(const std::string &name_) (function) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:228: warning: Member name() const (function) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:230: warning: Member setCubeType(Type type) (function) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:231: warning: Member cubeType() const (function) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:239: warning: Member m_data (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:240: warning: Member m_min (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:240: warning: Member m_max (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:240: warning: Member m_spacing (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:241: warning: Member m_points (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:242: warning: Member m_minValue (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:242: warning: Member m_maxValue (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:243: warning: Member m_name (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:244: warning: Member m_cubeType (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:245: warning: Member m_lock (variable) of class Avogadro::Core::Cube is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:194: warning: The following parameter of Avogadro::Core::Cube::setValue(unsigned int i, float value) is not documented: parameter 'value' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:33: warning: Member operator*() (function) of class Avogadro::Core::DihedralIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:37: warning: Member begin() (function) of class Avogadro::Core::DihedralIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:39: warning: Member end() const (function) of class Avogadro::Core::DihedralIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:43: warning: Member operator++() (function) of class Avogadro::Core::DihedralIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:45: warning: Member operator!=(const DihedralIterator &other) (function) of class Avogadro::Core::DihedralIterator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:229: warning: Member symmetry() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:230: warning: Member atomIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:231: warning: Member atomIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:232: warning: Member moIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:233: warning: Member moIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:234: warning: Member gtoIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:235: warning: Member gtoIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:236: warning: Member cIndices() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:237: warning: Member cIndices() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:238: warning: Member gtoA() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:239: warning: Member gtoA() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:240: warning: Member gtoC() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:241: warning: Member gtoC() const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:242: warning: Member gtoCN() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:248: warning: Member moMatrix(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:256: warning: Member moMatrix(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:264: warning: Member moEnergy(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:272: warning: Member moEnergy(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:280: warning: Member moOccupancy(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:288: warning: Member moOccupancy(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:296: warning: Member moNumber(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:304: warning: Member moNumber(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:312: warning: Member densityMatrix() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:313: warning: Member spinDensityMatrix() (function) of class Avogadro::Core::GaussianSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussiansettools.h:35: warning: Member GaussianSetTools(Molecule *mol=nullptr) (function) of class Avogadro::Core::GaussianSetTools is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:31: warning: Member addAtom(size_t layer) (function) of class Avogadro::Core::Layer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:32: warning: Member addAtom(size_t layer, Index atom) (function) of class Avogadro::Core::Layer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:33: warning: Member addAtomToActiveLayer(Index atom) (function) of class Avogadro::Core::Layer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:34: warning: Member removeAtom(Index atom) (function) of class Avogadro::Core::Layer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:35: warning: Member removeLayer(size_t layer) (function) of class Avogadro::Core::Layer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:34: warning: Member LayerData(std::string save="") (function) of class Avogadro::Core::LayerData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:49: warning: Member boolToString(bool b) (function) of class Avogadro::Core::LayerData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:50: warning: Member stringToBool(std::string b) (function) of class Avogadro::Core::LayerData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:51: warning: Member m_save (variable) of class Avogadro::Core::LayerData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. ro/rendering/volumegeometry.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/volumegeometry.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h... Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/docs/mainpage.dox... Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/docs/mainpage.dox... Building macro definition list... Building group list... Building directory list... Building namespace list... Building file list... Building class list... Building concept list... Computing nesting relations for classes... Associating documentation with classes... Associating documentation with concepts... Associating documentation with modules... Building example list... Searching for enumerations... Searching for documented typedefs... Searching for members imported via using declarations... Searching for included using directives... Searching for documented variables... Building interface member list... Building member list... Searching for friends... Searching for documented defines... Computing class inheritance relations... Computing class usage relations... Flushing cached template relations that have become invalid... Computing class relations... Add enum values to enums... Searching for member function documentation... Creating members for template instances... Building page list... Search for main page... Computing page relations... Determining the scope of groups... Computing module relations... Sorting lists... Determining which enums are documented Computing member relations... Building full member lists recursively... Adding members to member groups. Distributing member group documentation. Computing member references... Inheriting documentation... Generating disk names... Adding source references... Adding xrefitems... Sorting member lists... Setting anonymous enum type... Computing dependencies between directories... Generating citations page... Counting members... Counting data structures... Resolving user defined references... Finding anchors and sections in the documentation... Transferring function references... Combining using relations... Adding members to index pages... Correcting members for VHDL... Computing tooltip texts... Generating style sheet... Generating search indices... Generating example documentation... Generating file sources... Generating file documentation... Generating page documentation... Generating group documentation... Generating class documentation... Generating docs for compound vtkAvogadroActor... Generating concept documentation... Generating module documentation... Generating namespace documentation... Generating docs for compound Avogadro::Frustrum... Generating docs for compound Avogadro::TypeTraits... Generating docs for compound Avogadro::TypeTraits< char >... Generating docs for compound Avogadro::TypeTraits< double >... Generating docs for compound Avogadro::TypeTraits< float >... Generating docs for compound Avogadro::TypeTraits< int >... Generating docs for compound Avogadro::TypeTraits< short >... Generating docs for compound Avogadro::TypeTraits< unsigned char >... Generating docs for compound Avogadro::TypeTraits< unsigned int >... Generating docs for compound Avogadro::TypeTraits< unsigned short >... Generating docs for compound Avogadro::Calc::ChargeManager... Generating docs for compound Avogadro::Calc::ChargeModel... Generating docs for compound Avogadro::Calc::DefaultModel... Generating docs for compound Avogadro::Calc::EnergyCalculator... Generating docs for compound Avogadro::Calc::EnergyManager... Generating docs for compound Avogadro::Calc::LennardJones... Generating docs for namespace Avogadro::Core Generating docs for compound Avogadro::Core::AngleIterator... Generating docs for compound Avogadro::Core::Array... Generating docs for compound Avogadro::Core::ArraySet... Generating docs for nested compound Avogadro::Core::ArraySet::Holder... Generating docs for nested compound Avogadro::Core::ArraySet::PlaceHolder... Generating docs for compound Avogadro::Core::Atom... Generating docs for compound Avogadro::Core::AtomTemplate... Generating docs for compound Avogadro::Core::AtomTyper... Generating docs for compound Avogadro::Core::AtomUtilities... Generating docs for compound Avogadro::Core::AvoSpglib... Generating docs for compound Avogadro::Core::BasisSet... Generating docs for compound Avogadro::Core::Bond... Generating docs for compound Avogadro::Core::BondTemplate... Generating docs for compound Avogadro::Core::Color3f... Generating docs for compound Avogadro::Core::CoordinateBlockGenerator... Generating docs for compound Avogadro::Core::CoordinateSet... Generating docs for compound Avogadro::Core::CrystalTools... Generating docs for compound Avogadro::Core::Cube... Generating docs for compound Avogadro::Core::DihedralIterator... Generating docs for compound Avogadro::Core::Elements... Generating docs for compound Avogadro::Core::GaussianSet... Generating docs for compound Avogadro::Core::GaussianSetTools... Generating docs for compound Avogadro::Core::Graph... Generating docs for compound Avogadro::Core::hBondRecord... Generating docs for compound Avogadro::Core::Layer... Generating docs for compound Avogadro::Core::LayerData... Generating docs for compound Avogadro::Core::LayerManager... Generating docs for compound Avogadro::Core::Mesh... Generating docs for compound Avogadro::Core::Molecule... Generating docs for compound Avogadro::Core::MoleculeInfo... Generating docs for compound Avogadro::Core::Mutex... Generating docs for compound Avogadro::Core::NameAtomTyper... Generating docs for compound Avogadro::Core::NeighborPerceiver... Generating docs for compound Avogadro::Core::Residue... Generating docs for compound Avogadro::Core::ResidueData... Generating docs for compound Avogadro::Core::RingPerceiver... Generating docs for compound Avogadro::Core::SecondaryStructureAssigner... Generating docs for compound Avogadro::Core::SharedMutex... Generating docs for compound Avogadro::Core::SlaterSet... Generating docs for compound Avogadro::Core::SlaterSetTools... Generating docs for compound Avogadro::Core::SpaceGroups... Generating docs for compound Avogadro::Core::SymbolAtomTyper... Generating docs for compound Avogadro::Core::UnitCell... Generating docs for compound Avogadro::Core::Variant... Generating docs for compound Avogadro::Core::VariantMap... Generating docs for compound Avogadro::Core::internal::ArrayRefContainer... Generating docs for compound Avogadro::Io::CaseInsensitiveComparator... Generating docs for nested compound Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare... Generating docs for compound Avogadro::Io::CjsonFormat... Generating docs for compound Avogadro::Io::CmlFormat... Generating docs for compound Avogadro::Io::DcdFormat... Generating docs for compound Avogadro::Io::FileFormat... Generating docs for compound Avogadro::Io::FileFormatManager... Generating docs for compound Avogadro::Io::GromacsFormat... Generating docs for compound Avogadro::Io::Hdf5DataFormat... Generating docs for compound Avogadro::Io::LammpsDataFormat... Generating docs for compound Avogadro::Io::LammpsTrajectoryFormat... Generating docs for compound Avogadro::/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:213: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:214: warning: Member layer(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:274: warning: Member label(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:275: warning: Member setLabel(const Core::Array< std::string > &label) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:276: warning: Member setLabel(Index atomId, const std::string &label) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:309: warning: Member addAtom(unsigned char atomicNumber, Vector3 position3d) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:407: warning: Member mesh(Index index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:408: warning: Member mesh(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:410: warning: Member meshCount() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:412: warning: Member clearMeshes() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:420: warning: Member cube(Index index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:421: warning: Member cube(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:423: warning: Member cubeCount() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:425: warning: Member clearCubes() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:432: warning: Member cubes() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:487: warning: Member basisSet() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:508: warning: Member vibrationFrequencies() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:509: warning: Member setVibrationFrequencies(const Array< double > &freq) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:510: warning: Member vibrationIRIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:511: warning: Member setVibrationIRIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:512: warning: Member vibrationRamanIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:513: warning: Member setVibrationRamanIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:514: warning: Member vibrationLx(int mode) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:515: warning: Member setVibrationLx(const Array< Array< Vector3 > > &lx) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:536: warning: Member perceiveBondOrders() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:544: warning: Member coordinate3dCount() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:545: warning: Member setCoordinate3d(int coord) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:546: warning: Member coordinate3d(int index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:547: warning: Member setCoordinate3d(const Array< Vector3 > &coords, int index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:553: warning: Member timeStep(int index, bool &status) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:584: warning: Member addResidue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:585: warning: Member addResidue(Residue &residue) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:586: warning: Member residue(Index index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:588: warning: Member residues() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:589: warning: Member residues() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:714: warning: Member frozenAtomMask() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:721: warning: Member getAtomBonds(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:722: warning: Member getAtomOrders(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:726: warning: Member removeBonds(Index atom) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:728: warning: Member addBonds(const Array< std::pair< Index, Index > > &bonds, const Array< unsigned char > &orders) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:732: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:734: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:736: warning: Member getAtomsAtLayer(size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:738: warning: Member layer() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:739: warning: Member layer() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:724: warning: Member makeBondPair(const Index &a, const Index &b) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:752: warning: Member m_data (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:755: warning: Member m_customElementMap (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:758: warning: Member m_positions2d (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:759: warning: Member m_positions3d (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:760: warning: Member m_label (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:762: warning: Member m_timesteps (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:763: warning: Member m_hybridizations (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:764: warning: Member m_formalCharges (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:765: warning: Member m_forceVectors (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:766: warning: Member m_colors (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:768: warning: Member m_vibrationFrequencies (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:769: warning: Member m_vibrationIRIntensities (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:770: warning: Member m_vibrationRamanIntensities (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:771: warning: Member m_vibrationLx (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:774: warning: Member m_selectedAtoms (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:776: warning: Member m_meshes (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:777: warning: Member m_cubes (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:779: warning: Member m_basisSet (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:780: warning: Member m_unitCell (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:781: warning: Member m_residues (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:784: warning: Member m_hallNumber (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786: warning: Member m_frozenAtomMask (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:70: warning: Member MoleculeInfo(const Molecule *m) (function) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:76: warning: Member clear() (function) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:62: warning: Member mol (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:63: warning: Member visible (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:64: warning: Member locked (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:65: warning: Member enable (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:66: warning: Member settings (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:67: warning: Member layer (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:68: warning: Member loaded (variable) of class Avogadro::Core::MoleculeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/nameatomtyper.h:26: warning: Member NameAtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::NameAtomTyper is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class AtomTyper< std::string > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class AtomTyper< std::string > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:60: warning: Member m_maxDistance (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:61: warning: Member m_binCount (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:62: warning: Member m_bins (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:63: warning: Member m_minPos (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:64: warning: Member m_maxPos (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:65: warning: Member m_cachedArray (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:66: warning: Member m_cachedIndex (variable) of class Avogadro::Core::NeighborPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:39: warning: Member SecondaryStructure (enumeration) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:55: warning: Member Residue(std::string &name) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:56: warning: Member Residue(std::string &name, Index &number) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:57: warning: Member Residue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:59: warning: Member Residue(const Residue &other) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:61: warning: Member operator=(Residue other) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:65: warning: Member residueName() const (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:67: warning: Member setResidueName(std::string &name) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:69: warning: Member residueId() const (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:71: warning: Member setResidueId(Index &number) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:73: warning: Member chainId() const (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:75: warning: Member setChainId(const char &id) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:77: warning: Member secondaryStructure() const (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:82: warning: Member setSecondaryStructure(const SecondaryStructure &ss) (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:120: warning: Member hasAtomByIndex(Index index) const (function) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:138: warning: Member m_residueName (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:139: warning: Member m_residueId (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:140: warning: Member m_chainId (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:141: warning: Member m_atomNameMap (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:142: warning: Member m_heterogen (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:143: warning: Member m_color (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:144: warning: Member m_customColorSet (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:145: warning: Member m_secondaryStructure (variable) of class Avogadro::Core::Residue is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:21: warning: Member ResidueData(std::string name, std::map< std::string, int > atomNames, std::vector< std::pair< std::string, std::string > > singleBonds, std::vector< std::pair< std::string, std::string > > doubleBonds) (function) of class Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:31: warning: Member ResidueData(const ResidueData &other) (function) of class Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:39: warning: Member operator=(ResidueData other) (function) of class Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:46: warning: Member residueAtoms() (function) of class Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:48: warning: Member residueSingleBonds() (function) of class Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:53: warning: Member residueDoubleBonds() (function) of class Avogadro::Core::ResidueData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:23: warning: Member RingPerceiver(const Molecule *m=nullptr) (function) of class Avogadro::Core::RingPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:27: warning: Member setMolecule(const Molecule *m) (function) of class Avogadro::Core::RingPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:28: warning: Member molecule() const (function) of class Avogadro::Core::RingPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:31: warning: Member rings() (function) of class Avogadro::Core::RingPerceiver is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:40: warning: Member SecondaryStructureAssigner(Molecule *m=nullptr) (function) of class Avogadro::Core::SecondaryStructureAssigner is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:43: warning: Member assign(Molecule *mol) (function) of class Avogadro::Core::SecondaryStructureAssigner is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:137: warning: Member slaterTypes() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:138: warning: Member zetas() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:139: warning: Member factors() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:140: warning: Member PQNs() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:141: warning: Member normalizedMatrix() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:142: warning: Member densityMatrix() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:144: warning: Member outputAll() (function) of class Avogadro::Core::SlaterSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slatersettools.h:33: warning: Member SlaterSetTools(Molecule *mol=nullptr) (function) of class Avogadro::Core::SlaterSetTools is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/symbolatomtyper.h:26: warning: Member SymbolAtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::SymbolAtomTyper is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class AtomTyper< std::string > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class AtomTyper< std::string > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:27: warning: Member UnitCell(Real a, Real b, Real c, Real alpha, Real beta, Real gamma) (function) of class Avogadro::Core::UnitCell is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:28: warning: Member UnitCell(const Vector3 &a, const Vector3 &b, const Vector3 &c) (function) of class Avogadro::Core::UnitCell is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:29: warning: Member UnitCell(const Matrix3 &cellMatrix) (function) of class Avogadro::Core::UnitCell is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:30: warning: Member UnitCell(const UnitCell &other) (function) of class Avogadro::Core::UnitCell is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:32: warning: Member operator=(UnitCell other) (function) of class Avogadro::Core::UnitCell is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:89: warning: Member setFractionalMatrix(const Matrix3 &m) (function) of class Avogadro::Core::UnitCell is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant.h:31: warning: Member Type (enumeration) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant.h:127: warning: Member operator=(const Variant &variant) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:62: warning: Member setValue(bool v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:73: warning: Member setValue(char v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:84: warning: Member setValue(short v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:95: warning: Member setValue(int v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:106: warning: Member setValue(long v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:117: warning: Member setValue(float v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:128: warning: Member setValue(double v) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:139: warning: Member setValue(std::string string) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:150: warning: Member setValue(const char *string) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:156: warning: Member setValue(void *pointer) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:167: warning: Member setValue(MatrixX matrix) (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:184: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:195: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:206: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:217: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:234: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:247: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:262: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:277: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:286: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:304: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:313: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.h:29: warning: Member iterator (typedef) of class Avogadro::Core::VariantMap is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.h:30: warning: Member const_iterator (typedef) of class Avogadro::Core::VariantMap is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:25: warning: Member ValueType (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:26: warning: Member Parent (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:29: warning: Member value_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:30: warning: Member allocator_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:31: warning: Member reference (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:32: warning: Member const_reference (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:33: warning: Member pointer (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:34: warning: Member const_pointer (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:35: warning: Member iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:36: warning: Member const_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:37: warning: Member reverse_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:38: warning: Member const_reverse_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:39: warning: Member difference_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:40: warning: Member size_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:44: warning: Member ArrayRefContainer(const size_t n, const ValueType &value=ValueType()) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:49: warning: Member ArrayRefContainer(const ArrayRefContainer &other) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:53: warning: Member ArrayRefContainer(InputIterator first, InputIterator last) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:58: warning: Member reref() (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:62: warning: Member deref() (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:69: warning: Member ref() const (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:72: warning: Member m_ref (variable) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:74: warning: Member data (variable) of class Avogadro::Core::internal::ArrayRefContainer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:39: warning: Member operator()(const std::string &s1, const std::string &s2) const noexcept (function) of struct Avogadro::Io::CaseInsensitiveComparator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:34: warning: Member operator()(const unsigned char &c1, const unsigned char &c2) const (function) of struct Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/pdbformat.h:56: warning: Member perceiveSubstitutedCations(Core::Molecule &molecule) (function) of class Avogadro::Io::PdbFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:82: warning: Member BatchJob(const QString &scriptFilePath, QObject *parent=nullptr) (function) of class Avogadro::MoleQueue::BatchJob is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:62: warning: Member InvalidBatchId (variable) of class Avogadro::MoleQueue::BatchJob is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:68: warning: Member InvalidRequestId (variable) of class Avogadro::MoleQueue::BatchJob is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:75: warning: Member InvalidServerId (variable) of class Avogadro::MoleQueue::BatchJob is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:38: warning: Member Client(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::Client is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:227: warning: Member MessageType (enumeration) of class Avogadro::MoleQueue::Client is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:238: warning: Member m_jsonRpcClient (variable) of class Avogadro::MoleQueue::Client is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:239: warning: Member m_requests (variable) of class Avogadro::MoleQueue::Client is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:126: warning: Unsupported xml/html tag found /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h:459: warning: Member InputGenerator(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h:454: warning: The following parameter of Avogadro::MoleQueue::InputGenerator::InputGenerator(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h:37: warning: Member InputGeneratorDialog(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGeneratorDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h:38: warning: Member InputGeneratorDialog(const QString &scriptFileName, QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGeneratorDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:126: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:127: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:128: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:129: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:131: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:132: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:133: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:134: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:135: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:136: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jobobject.h:148: warning: Member m_value (variable) of class Avogadro::MoleQueue::JobObject is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h:48: warning: Member JsonRpcClient(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::JsonRpcClient is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h:136: warning: Member m_packetCounter (variable) of class Avogadro::MoleQueue::JsonRpcClient is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h:137: warning: Member m_socket (variable) of class Avogadro::MoleQueue::JsonRpcClient is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h:153: warning: Member done(int r) override (slot) of class Avogadro::MoleQueue::MoleQueueDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h:34: warning: Member MoleQueueDialog(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.h:35: warning: Member MoleQueueManager(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:85: warning: Member data(const QModelIndex &idx, int role) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:86: warning: Member flags(const QModelIndex &idx=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:87: warning: Member headerData(int section, Qt::Orientation orientation, int role) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:89: warning: Member index(int row, int column, const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:91: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:92: warning: Member rowCount(const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:93: warning: Member columnCount(const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h:33: warning: Member MoleQueueWidget(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h:127: warning: Member batchMode() const (function) of class Avogadro::MoleQueue::MoleQueueWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:37: warning: Member ColorButton(QWidget *parent=0) (function) of class Avogadro::QtGui::ColorButton is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:38: warning: Member ColorButton(const QColor &initial, QWidget *parent=0) (function) of class Avogadro::QtGui::ColorButton is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: argument 'custom' of command @param is not found in the argument list of ColorButton::setDialogTitle(const QString title="") /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: The following parameter of Avogadro::QtGui::ColorButton::setDialogTitle(const QString title="") is not documented: parameter 'title' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:41: warning: Member splitVertical() (signal) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:42: warning: Member splitHorizontal() (signal) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:43: warning: Member closeView() (signal) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:30: warning: Member ContainerWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:34: warning: Member setViewWidget(QWidget *widget) (function) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:35: warning: Member viewWidget() (function) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:37: warning: Member setActive(bool active) (function) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:38: warning: Member isActive() const (function) of class Avogadro::QtGui::ContainerWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.h:31: warning: Member CustomElementDialog(Molecule &mol, QWidget *parent=nullptr) (function) of class Avogadro::QtGui::CustomElementDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.h:44: warning: Member ExtensionPlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ExtensionPlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:25: warning: Member Mode (enumeration) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:48: warning: Member setFileName(const QString &fname) (slot) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:45: warning: Member fileNameChanged(const QString &filename) (signal) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:31: warning: Member FileBrowseWidget(QWidget *theParent=nullptr) (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:34: warning: Member fileName() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:36: warning: Member validFileName() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:38: warning: Member browseButton() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:39: warning: Member lineEdit() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:41: warning: Member setMode(Mode m) (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:42: warning: Member mode() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h:91: warning: Member highlightBlock(const QString &text) override (function) of class Avogadro::QtGui::GenericHighlighter is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h:77: warning: The following parameters of Avogadro::QtGui::HydrogenTools::generateNewHydrogenPositions(const RWAtom &atom, int numberOfHydrogens, std::vector< Vector3 > &positions) are not documented: parameter 'atom' parameter 'numberOfHydrogens' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:612: warning: Member finished() (signal) of class Avogadro::QtGui::InterfaceScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:457: warning: Member InterfaceScript(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::InterfaceScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:452: warning: The following parameter of Avogadro::QtGui::InterfaceScript::InterfaceScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:126: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:127: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:128: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:129: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:131: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:132: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:133: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:134: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:135: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:136: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:126: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:127: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:128: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:129: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:131: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:132: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:133: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:134: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:135: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:136: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:31: warning: Member ColumnType (enumeration) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:68: warning: Member updateRows() (slot) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:40: warning: Member LayerModel(QObject *p=0) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:42: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:43: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:44: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:46: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:48: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:50: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:52: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:55: warning: Member addItem() (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:56: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:57: warning: Member addMolecule(const Molecule *mol) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:58: warning: Member setActiveLayer(int index, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:59: warning: Member removeItem(int row, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:61: warning: Member items() const (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:63: warning: Member flipVisible(size_t row) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:64: warning: Member flipLocked(size_t row) (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:65: warning: Member layerCount() const (function) of class Avogadro::QtGui::LayerModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:29: warning: Member removeLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:30: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:31: warning: Member setActiveLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:132: warning: Member duplicate(const Vector3i &c, const Vector3f &pos) (function) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:139: warning: Member m_iso (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:147: warning: Member m_normals (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:148: warning: Member m_indices (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:149: warning: Member m_progmin (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:150: warning: Member m_progmax (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:158: warning: Member a2iVertexOffset[8][3] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:159: warning: Member a2iEdgeConnection[12][2] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:160: warning: Member a2fEdgeDirection[12][3] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:161: warning: Member a2iTetrahedronEdgeConnection[6][2] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:162: warning: Member a2iTetrahedronsInACube[6][4] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:163: warning: Member aiTetrahedronEdgeFlags[16] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:164: warning: Member a2iTetrahedronTriangles[16][7] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:165: warning: Member aiCubeEdgeFlags[256] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:166: warning: Member a2iTriangleConnectionTable[256][16] (variable) of class Avogadro::QtGui::MeshGenerator is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:52: warning: The following parameters of Avogadro::QtGui::MeshGenerator::MeshGenerator(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false, QObject *parent=nullptr) are not documented: parameter 'reverse' parameter 'parent' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:52: warning: found documented return type for Avogadro::QtGui::MeshGenerator::MeshGenerator that does not return anything /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:68: warning: The following parameter of Avogadro::QtGui::MeshGenerator::initialize(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false) is not documented: parameter 'reverse' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:125: warning: The following parameter of Avogadro::QtGui::MeshGenerator::offset(float val1, float val2) is not documented: parameter 'val2' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:48: warning: Member Molecule(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:96: warning: Member addAtom(unsigned char number, Vector3 position3d, Index uniqueId=MaxIndex) (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:133: warning: Member atomUniqueIds() (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:155: warning: Member addBonds(const Core::Array< std::pair< Index, Index > > &bonds, const Core::Array< unsigned char > &orders) (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:228: warning: Member bondUniqueIds() (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:230: warning: Member findAtomUniqueId(Index index) const (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:231: warning: Member findBondUniqueId(Index index) const (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:233: warning: Member undoMolecule() (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:235: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:236: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::QtGui::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:213: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:214: warning: Member layer(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:274: warning: Member label(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:275: warning: Member setLabel(const Core::Array< std::string > &label) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:276: warning: Member setLabel(Index atomId, const std::string &label) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:309: warning: Member addAtom(unsigned char atomicNumber, Vector3 position3d) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:407: warning: Member mesh(Index index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:408: warning: Member mesh(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:410: warning: Member meshCount() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:412: warning: Member clearMeshes() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:420: warning: Member cube(Index index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:421: warning: Member cube(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:423: warning: Member cubeCount() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:425: warning: Member clearCubes() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:432: warning: Member cubes() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:487: warning: Member basisSet() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:508: warning: Member vibrationFrequencies() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:509: warning: Member setVibrationFrequencies(const Array< double > &freq) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:510: warning: Member vibrationIRIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:511: warning: Member setVibrationIRIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:512: warning: Member vibrationRamanIntensities() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:513: warning: Member setVibrationRamanIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:514: warning: Member vibrationLx(int mode) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:515: warning: Member setVibrationLx(const Array< Array< Vector3 > > &lx) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:536: warning: Member perceiveBondOrders() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:544: warning: Member coordinate3dCount() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:545: warning: Member setCoordinate3d(int coord) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:546: warning: Member coordinate3d(int index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:547: warning: Member setCoordinate3d(const Array< Vector3 > &coords, int index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:553: warning: Member timeStep(int index, bool &status) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:584: warning: Member addResidue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:585: warning: Member addResidue(Residue &residue) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:586: warning: Member residue(Index index) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:588: warning: Member residues() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:589: warning: Member residues() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:714: warning: Member frozenAtomMask() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:721: warning: Member getAtomBonds(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:722: warning: Member getAtomOrders(Index index) const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:726: warning: Member removeBonds(Index atom) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:728: warning: Member addBonds(const Array< std::pair< Index, Index > > &bonds, const Array< unsigned char > &orders) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:732: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:734: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:736: warning: Member getAtomsAtLayer(size_t layer) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:738: warning: Member layer() (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:739: warning: Member layer() const (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:724: warning: Member makeBondPair(const Index &a, const Index &b) (function) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:752: warning: Member m_data (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:755: warning: Member m_customElementMap (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:758: warning: Member m_positions2d (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:759: warning: Member m_positions3d (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:760: warning: Member m_label (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:762: warning: Member m_timesteps (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:763: warning: Member m_hybridizations (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:764: warning: Member m_formalCharges (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:765: warning: Member m_forceVectors (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:766: warning: Member m_colors (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:768: warning: Member m_vibrationFrequencies (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:769: warning: Member m_vibrationIRIntensities (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:770: warning: Member m_vibrationRamanIntensities (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:771: warning: Member m_vibrationLx (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:774: warning: Member m_selectedAtoms (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:776: warning: Member m_meshes (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:777: warning: Member m_cubes (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:779: warning: Member m_basisSet (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:780: warning: Member m_unitCell (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:781: warning: Member m_residues (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:784: warning: Member m_hallNumber (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786: warning: Member m_frozenAtomMask (variable) of class Avogadro::Core::Molecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'a' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'b' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: The following parameters of Avogadro::QtGui::Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) are not documented: parameter 'atomId1' parameter 'atomId2' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:66: warning: Member setActiveMolecule(QObject *active) (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:67: warning: Member addItem(Avogadro::QtGui::Molecule *item) (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:68: warning: Member removeItem(Avogadro::QtGui::Molecule *item) (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:69: warning: Member itemChanged() (slot) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:63: warning: Member moleculeStateChanged(Avogadro::QtGui::Molecule *) (signal) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:40: warning: Member MoleculeModel(QObject *p=nullptr) (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:42: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:43: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:44: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:46: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:48: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:50: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:52: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:55: warning: Member clear() (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:57: warning: Member molecules() const (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:58: warning: Member activeMolecules() const (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:60: warning: Member activeMolecule() const (function) of class Avogadro::QtGui::MoleculeModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:23: warning: Member m_molecule (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:24: warning: Member m_modelView (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:25: warning: Member m_dirty (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:26: warning: Member m_active (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:53: warning: Member splitHorizontal() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:54: warning: Member splitVertical() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:55: warning: Member createView() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:56: warning: Member removeView() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:50: warning: Member activeWidgetChanged(QWidget *widget) (signal) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:33: warning: Member MultiViewWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:37: warning: Member addWidget(QWidget *widget) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:44: warning: Member setActiveWidget(QWidget *widget) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:46: warning: Member setFactory(ViewFactory *factory) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:47: warning: Member setDefaultView(const QString &viewName) (function) of class Avogadro::QtGui::MultiViewWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h:24: warning: Member MoleculeType (typedef) of class Avogadro::QtGui::PersistentAtom is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h:25: warning: Member AtomType (typedef) of class Avogadro::QtGui::PersistentAtom is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h:24: warning: Member MoleculeType (typedef) of class Avogadro::QtGui::PersistentBond is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h:25: warning: Member BondType (typedef) of class Avogadro::QtGui::PersistentBond is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h:26: warning: Member PluginLayerManager(const std::string &name="undef") (function) of class Avogadro::QtGui::PluginLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h:32: warning: Member atomLocked(size_t atom) const (function) of class Avogadro::QtGui::PluginLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:139: warning: Member m_debug (variable) of class Avogadro::QtGui::PythonScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:140: warning: Member m_pythonInterpreter (variable) of class Avogadro::QtGui::PythonScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:141: warning: Member m_scriptFilePath (variable) of class Avogadro::QtGui::PythonScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:142: warning: Member m_errors (variable) of class Avogadro::QtGui::PythonScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:143: warning: Member m_process (variable) of class Avogadro::QtGui::PythonScript is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: argument 'scriptFilePath_' of command @param is not found in the argument list of PythonScript::PythonScript(QObject *parent_=nullptr) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:675: warning: Member RWAtom(RWMolecule *m, Index i) (function) of class Avogadro::QtGui::RWAtom is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:176: warning: Member selected() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:187: warning: Member label() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:117: warning: Member atomicNumber() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:128: warning: Member position2d() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:136: warning: Member position3d() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:144: warning: Member hybridization() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:152: warning: Member formalCharge() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:160: warning: Member color() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:168: warning: Member layer() const (function) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class AtomTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:682: warning: Member RWBond(RWMolecule *m, Index i) (function) of class Avogadro::QtGui::RWBond is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:93: warning: Member atom2() const (function) of class BondTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:111: warning: Member order() const (function) of class BondTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class BondTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class BondTemplate< RWMolecule > is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:29: warning: Member removeLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:30: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:31: warning: Member setActiveLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:75: warning: Member molecule() (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:76: warning: Member molecule() const (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:226: warning: Member label(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:227: warning: Member setLabel(Index atomId, const std::string &label, const QString &undoText=tr("Change Atom Label")) (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:241: warning: Member setAtomPosition2d(Index, const Vector2 &) (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:242: warning: Member atomPosition2d(Index) (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:243: warning: Member atomPositions2d() const (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:298: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:299: warning: Member layer(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:656: warning: Member findAtomUniqueId(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:657: warning: Member findBondUniqueId(Index bondId) const (function) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:664: warning: Member m_interactive (variable) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:666: warning: Member m_undoStack (variable) of class Avogadro::QtGui::RWMolecule is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:628: warning: The following parameter of Avogadro::QtGui::RWMolecule::setForceVector(Index atomId, const Vector3 &pos, const QString &undoText=QStringLiteral("Change Force Vectors")) is not documented: parameter 'atomId' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:30: warning: Member UndoCommand(RWMolecule &m) (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:36: warning: Member positions3d() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:37: warning: Member atomUniqueIds() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:38: warning: Member bondUniqueIds() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:40: warning: Member m_mol (variable) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:41: warning: Member m_molecule (variable) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:90: warning: Member drawablesChanged() (signal) of class Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:42: warning: Member ScenePlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:51: warning: Member processEditable(const RWMolecule &molecule, Rendering::GroupNode &node) (function) of class Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:80: warning: Member setupWidget() (function) of class Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:87: warning: Member defaultBehavior() const (function) of class Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:93: warning: Member m_layerManager (variable) of class Avogadro::QtGui::ScenePlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:55: warning: Member addItem(Avogadro::QtGui::ScenePlugin *item) (slot) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:56: warning: Member removeItem(Avogadro::QtGui::ScenePlugin *item) (slot) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:57: warning: Member itemChanged() (slot) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:51: warning: Member pluginStateChanged(Avogadro::QtGui::ScenePlugin *) (signal) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:52: warning: Member pluginConfigChanged() (signal) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:30: warning: Member ScenePluginModel(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:32: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:33: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:34: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:36: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:38: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:40: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:42: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:45: warning: Member clear() (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:47: warning: Member scenePlugins() const (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:48: warning: Member activeScenePlugins() const (function) of class Avogadro::QtGui::ScenePluginModel is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h:35: warning: Member ScriptLoader(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::ScriptLoader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h:44: warning: Member queryProgramName(const QString &scriptFilePath, QString &displayName) (function) of class Avogadro::QtGui::ScriptLoader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:140: warning: Member setEditMolecule(QtGui::RWMolecule *) (slot) of class Avogadro::QtGui::ToolPlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:44: warning: Member ToolPlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ToolPlugin is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:169: warning: Member createInstance(QObject *parent=nullptr)=0 (function) of class Avogadro::QtGui::ToolPluginFactory is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:170: warning: Member identifier() const =0 (function) of class Avogadro::QtGui::ToolPluginFactory is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h:105: warning: Member rendererInvalid() (signal) of class Avogadro::QtOpenGL::GLWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h:49: warning: Member GLWidget(QWidget *parent=nullptr) (function) of class Avogadro::QtOpenGL::GLWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:80: warning: Member GamessukOut(const QString &filename, GaussianSet *basis) (function) of class Avogadro::QuantumIO::GamessukOut is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:82: warning: Member GamessukOutNoQt(const std::string &filename, GaussianSet *basis) (function) of class Avogadro::QuantumIO::GamessukOut is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:83: warning: Member outputParsedData() (function) of class Avogadro::QuantumIO::GamessukOut is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h:54: warning: Member outputAll() (function) of class Avogadro::QuantumIO::GaussianFchk is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:37: warning: Member outputCoord() (function) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:38: warning: Member outputBasis() (function) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:51: warning: Member atomLabels (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:52: warning: Member coordinates (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:54: warning: Member shellLabels (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:55: warning: Member shells (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:58: warning: Member gtoIndicies (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:62: warning: Member gtoExponents (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:63: warning: Member gtoCoefficients (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:66: warning: Member moEnergies (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:68: warning: Member moVectors (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:72: warning: Member nShell (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:73: warning: Member nBasisFunctions (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:74: warning: Member nElectrons (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h:24: warning: Member outputAll() (function) of class Avogadro::QuantumIO::MopacAux is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h:24: warning: Member outputAll() (function) of class Avogadro::QuantumIO::NWChemLog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h:37: warning: Member AmbientOcclusionSphereGeometry(const AmbientOcclusionSphereGeometry &other) (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h:40: warning: Member operator=(AmbientOcclusionSphereGeometry) (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h:81: warning: Member spheres() const (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:41: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:44: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:38: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:28: warning: Member ArrowGeometry(const ArrowGeometry &other) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:31: warning: Member operator=(ArrowGeometry) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:50: warning: Member drawLine(const Vector3f &start, const Vector3f &end, double lineWidth) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:51: warning: Member drawCone(const Vector3f &base, const Vector3f &cap, double baseRadius, double) (function) of class Avogadro::Rendering::ArrowGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:25: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::ArrowGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h:20: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BezierGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:18: warning: Member BSplineGeometry(bool flat) (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:21: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:31: warning: Member ObjectType (enumeration) of class Avogadro::Rendering::BufferObject is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:37: warning: Member BufferObject(ObjectType type=ArrayBuffer) (function) of class Avogadro::Rendering::BufferObject is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:44: warning: Member Camera(const Camera &o) (function) of class Avogadro::Rendering::Camera is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:45: warning: Member operator=(const Camera &o) (function) of class Avogadro::Rendering::Camera is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:29: warning: Member Cartoon(float minRadius, float maxRadius) (function) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:32: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, size_t group, size_t id, Core::Residue::SecondaryStructure sec) (function) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:18: warning: Member BSplineGeometry(bool flat) (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:30: warning: Member ELIPSE_RATIO (variable) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:37: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const override (function) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:41: warning: Member computeScale(size_t index, float t, float scale) const override (function) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:21: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BSplineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:43: warning: Member m_type (variable) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:44: warning: Member m_minRadius (variable) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:44: warning: Member m_maxRadius (variable) of class Avogadro::Rendering::Cartoon is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:75: warning: Member ColorNormalVertex(const Vector3ub &c, const Vector3f &n, const Vector3f &v) (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:79: warning: Member colorOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:80: warning: Member normalOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:84: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:69: warning: Member color (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:70: warning: Member unusedAlign (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:71: warning: Member normal (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:72: warning: Member vertex (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:73: warning: Member padding[4] (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:48: warning: Member ColorTextureVertex(const Vector3f &p, const Vector3ub &c, const Vector2f &t, const Vector2f &t2=Vector2f::Zero()) (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:53: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:54: warning: Member colorOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:55: warning: Member textureCoordOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:60: warning: Member textureCoord2Offset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:42: warning: Member vertex (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:43: warning: Member color (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:44: warning: Member unusedAlign (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:45: warning: Member textureCoord (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:46: warning: Member textureCoord2 (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:94: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const =0 (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:123: warning: Member position() const (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:124: warning: Member setPosition(const Vector3f &pos) (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:126: warning: Member direction() const (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:127: warning: Member setDirection(const Vector3f &dir) (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:129: warning: Member length() const (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:130: warning: Member setLength(float l) (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:132: warning: Member radius() const (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:133: warning: Member setRadius(float r) (function) of class Avogadro::Rendering::Cylinder is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:18: warning: Member CylinderColor(const Vector3f &pos1, const Vector3f &pos2, float r, const Vector3ub &c, const Vector3ub &c2=Vector3ub::Zero()) (function) of struct Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:27: warning: Member end1 (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:28: warning: Member end2 (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:29: warning: Member radius (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:30: warning: Member color (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:31: warning: Member color2 (variable) of struct Avogadro::Rendering::CylinderColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:45: warning: Member CylinderGeometry(const CylinderGeometry &other) (function) of class Avogadro::Rendering::CylinderGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:48: warning: Member operator=(CylinderGeometry) (function) of class Avogadro::Rendering::CylinderGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:127: warning: Member cylinders() const (function) of class Avogadro::Rendering::CylinderGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:38: warning: Member DashedLineGeometry(const DashedLineGeometry &other) (function) of class Avogadro::Rendering::DashedLineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:41: warning: Member operator=(DashedLineGeometry) (function) of class Avogadro::Rendering::DashedLineGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:30: warning: Member PackedVertex(const Vector3f &v, const Vector4ub &c) (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:33: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:34: warning: Member colorOffset() (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:27: warning: Member vertex (variable) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:28: warning: Member color (variable) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:29: warning: Member projection (variable) of struct Avogadro::Rendering::EigenData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:30: warning: Member modelView (variable) of struct Avogadro::Rendering::EigenData is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:70: warning: Member drawables() const (function) of class Avogadro::Rendering::GeometryNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:99: warning: Member m_drawables (variable) of class Avogadro::Rendering::GeometryNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:38: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:39: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:40: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:41: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:42: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:43: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:44: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:45: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:46: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:47: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:48: warning: Member visit(LineStripGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:89: warning: Member camera() (function) of class Avogadro::Rendering::GLRenderer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:93: warning: Member overlayCamera() (function) of class Avogadro::Rendering::GLRenderer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:97: warning: Member scene() (function) of class Avogadro::Rendering::GLRenderer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:101: warning: Member solidPipeline() (function) of class Avogadro::Rendering::GLRenderer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:112: warning: Member m_perspectiveFrustum (variable) of class Avogadro::Rendering::GLRenderer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:113: warning: Member m_orthographicFrustum (variable) of class Avogadro::Rendering::GLRenderer is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:30: warning: Member GLRenderVisitor(const Camera &camera=Camera(), const TextRenderStrategy *trs=nullptr) (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:47: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:48: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:49: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:50: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:52: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:53: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:54: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:55: warning: Member visit(TextLabel2D &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:56: warning: Member visit(TextLabel3D &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:57: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:59: warning: Member setCamera(const Camera &camera_) (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:60: warning: Member camera() const (function) of class Avogadro::Rendering::GLRenderVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:28: warning: Member NodeType (enumeration) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:43: warning: Member GroupNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:96: warning: Member children() const (function) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:109: warning: Member clear(NodeType type) (function) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:110: warning: Member m_children (variable) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:54: warning: The following parameter of Avogadro::Rendering::GroupNode::addChild(Node *node, NodeType ui=NodeType::GEOMETRY) is not documented: parameter 'ui' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:38: warning: Member NodeInfo(Node *n, NodeType u) (function) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:39: warning: Member ui (variable) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:40: warning: Member node (variable) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:27: warning: Member operator==(const Identifier &other) const (function) of struct Avogadro::Rendering::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:33: warning: Member operator!=(const Identifier &other) const (function) of struct Avogadro::Rendering::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:35: warning: Member isValid() const (function) of struct Avogadro::Rendering::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:37: warning: Member molecule (variable) of struct Avogadro::Rendering::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:38: warning: Member type (variable) of struct Avogadro::Rendering::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:39: warning: Member index (variable) of struct Avogadro::Rendering::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:41: warning: Member Line(float r) (function) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:49: warning: Member add(Point *point) (function) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:54: warning: Member points (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:55: warning: Member dirty (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:56: warning: Member flat (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:57: warning: Member radius (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:58: warning: Member vbo (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:59: warning: Member ibo (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:60: warning: Member numberOfVertices (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:61: warning: Member numberOfIndices (variable) of struct Avogadro::Rendering::Line is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:41: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:44: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:38: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:64: warning: argument 'color' of command @param is not found in the argument list of LineStripGeometry::addLineStrip(const Core::Array< Vector3f > &vertices, float lineWidth) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:30: warning: Member PackedVertex(const Vector3f &v, const Vector4ub &c) (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:34: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:35: warning: Member colorOffset() (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:27: warning: Member vertex (variable) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:28: warning: Member color (variable) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:67: warning: argument 'colors' of command @param is not found in the argument list of MeshGeometry::addVertices(const Core::Array< Vector3f > &vertices, const Core::Array< Vector3f > &normals) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:32: warning: Member PackedVertex(const Vector4ub &c, const Vector3f &n, const Vector3f &v) (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:38: warning: Member colorOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:39: warning: Member normalOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:40: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:27: warning: Member color (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:28: warning: Member normal (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:29: warning: Member vertex (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:30: warning: Member padding[4] (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:37: warning: Member PLYVisitor(const Camera &camera) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:40: warning: Member begin() (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:41: warning: Member end() (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:47: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:48: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:49: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:50: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:52: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:53: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:54: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:55: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:56: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:57: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:59: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:60: warning: Member camera() const (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:62: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:63: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:64: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::PLYVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:30: warning: Member Point(const Vector3f &p, const Vector3ub &c, size_t i) (function) of struct Avogadro::Rendering::Point is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:33: warning: Member pos (variable) of struct Avogadro::Rendering::Point is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:34: warning: Member color (variable) of struct Avogadro::Rendering::Point is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:35: warning: Member id (variable) of struct Avogadro::Rendering::Point is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:29: warning: Member POVRayVisitor(const Camera &camera) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:32: warning: Member begin() (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:33: warning: Member end() (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:39: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:40: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:41: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:42: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:43: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:44: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:45: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:46: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:47: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:48: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:49: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:51: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:52: warning: Member camera() const (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:54: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:55: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:56: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::POVRayVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:58: warning: Member operator==(const Identifier &other) const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:64: warning: Member operator!=(const Identifier &other) const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:69: warning: Member isValid() const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:71: warning: Member molecule (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:72: warning: Member type (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:73: warning: Member index (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:41: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:44: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:38: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:108: warning: Member rootNode() const (function) of class Avogadro::Rendering::Scene is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:37: warning: Member Shader(Type type=Unknown, const std::string &source="") (function) of class Avogadro::Rendering::Shader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:70: warning: Member m_type (variable) of class Avogadro::Rendering::Shader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:71: warning: Member m_handle (variable) of class Avogadro::Rendering::Shader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:72: warning: Member m_dirty (variable) of class Avogadro::Rendering::Shader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:74: warning: Member m_source (variable) of class Avogadro::Rendering::Shader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:75: warning: Member m_error (variable) of class Avogadro::Rendering::Shader is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:23: warning: Member vertexShader (variable) of struct Avogadro::Rendering::ShaderInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:24: warning: Member fragmentShader (variable) of struct Avogadro::Rendering::ShaderInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:25: warning: Member program (variable) of struct Avogadro::Rendering::ShaderInfo is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:147: warning: Member setUniformValue(const std::string &name, const Eigen::Matrix4f &matrix) (function) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:156: warning: Member setAttributeArrayInternal(const std::string &name, void *buffer, Avogadro::Type type, int tupleSize, NormalizeOption normalize) (function) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:159: warning: Member m_handle (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:160: warning: Member m_vertexShader (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:161: warning: Member m_fragmentShader (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:163: warning: Member m_linked (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:165: warning: Member m_error (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:167: warning: Member m_attributes (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:169: warning: Member m_textureUnitBindings (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:170: warning: Member m_boundTextureUnits (variable) of class Avogadro::Rendering::ShaderProgram is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:53: warning: Member setAoEnabled(bool enabled) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:59: warning: Member setAoStrength(float strength) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:65: warning: Member setEdEnabled(bool enabled) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:75: warning: Member setEdStrength(float strength) (function) of class Avogadro::Rendering::SolidPipeline is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:95: warning: Member Sphere(const Vector3f &position_, float radius_, Primitive::Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Sphere is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:101: warning: Member position() const (function) of class Avogadro::Rendering::Sphere is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:102: warning: Member setPosition(const Vector3f &pos) (function) of class Avogadro::Rendering::Sphere is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:104: warning: Member radius() const (function) of class Avogadro::Rendering::Sphere is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:105: warning: Member setRadius(float r) (function) of class Avogadro::Rendering::Sphere is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:19: warning: Member SphereColor(Vector3f centre, float r, Vector3ub c) (function) of struct Avogadro::Rendering::SphereColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:22: warning: Member center (variable) of struct Avogadro::Rendering::SphereColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:23: warning: Member radius (variable) of struct Avogadro::Rendering::SphereColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:24: warning: Member color (variable) of struct Avogadro::Rendering::SphereColor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:43: warning: Member SphereGeometry(const SphereGeometry &other) (function) of class Avogadro::Rendering::SphereGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:46: warning: Member operator=(SphereGeometry) (function) of class Avogadro::Rendering::SphereGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:101: warning: Member spheres() const (function) of class Avogadro::Rendering::SphereGeometry is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented. Io::MdlFormat... Generating docs for compound Avogadro::Io::MMTFFormat... Generating docs for compound Avogadro::Io::OutcarFormat... Generating docs for compound Avogadro::Io::PdbFormat... Generating docs for compound Avogadro::Io::PoscarFormat... Generating docs for compound Avogadro::Io::TrrFormat... Generating docs for compound Avogadro::Io::TurbomoleFormat... Generating docs for compound Avogadro::Io::XyzFormat... Generating docs for compound Avogadro::MoleQueue::BatchJob... Generating docs for compound Avogadro::MoleQueue::Client... Generating docs for compound Avogadro::MoleQueue::InputGenerator... Generating docs for compound Avogadro::MoleQueue::InputGeneratorDialog... Generating docs for compound Avogadro::MoleQueue::InputGeneratorWidget... Generating docs for compound Avogadro::MoleQueue::JobObject... Generating docs for compound Avogadro::MoleQueue::JsonRpcClient... Generating docs for compound Avogadro::MoleQueue::MoleQueueDialog... Generating docs for compound Avogadro::MoleQueue::MoleQueueManager... Generating docs for compound Avogadro::MoleQueue::MoleQueueQueueListModel... Generating docs for compound Avogadro::MoleQueue::MoleQueueWidget... Generating docs for compound Avogadro::QtGui::BackgroundFileFormat... Generating docs for compound Avogadro::QtGui::ColorButton... Generating docs for compound Avogadro::QtGui::ContainerWidget... Generating docs for compound Avogadro::QtGui::CustomElementDialog... Generating docs for compound Avogadro::QtGui::ElementDetail... Generating docs for compound Avogadro::QtGui::ElementItem... Generating docs for compound Avogadro::QtGui::ElementTranslator... Generating docs for compound Avogadro::QtGui::ExtensionPlugin... Generating docs for compound Avogadro::QtGui::ExtensionPluginFactory... Generating docs for compound Avogadro::QtGui::FileBrowseWidget... Generating docs for compound Avogadro::QtGui::FileFormatDialog... Generating docs for compound Avogadro::QtGui::GenericHighlighter... Generating docs for nested compound Avogadro::QtGui::GenericHighlighter::Rule... Generating docs for compound Avogadro::QtGui::HydrogenTools... Generating docs for compound Avogadro::QtGui::InterfaceScript... Generating docs for compound Avogadro::QtGui::InterfaceWidget... Generating docs for compound Avogadro::QtGui::JsonWidget... Generating docs for compound Avogadro::QtGui::LayerModel... Generating docs for compound Avogadro::QtGui::MeshGenerator... Generating docs for compound Avogadro::QtGui::Molecule... Generating docs for compound Avogadro::QtGui::MoleculeModel... Generating docs for compound Avogadro::QtGui::MoleculeSystem... Generating docs for compound Avogadro::QtGui::MultiViewWidget... Generating docs for compound Avogadro::QtGui::PeriodicTableScene... Generating docs for compound Avogadro::QtGui::PeriodicTableView... Generating docs for compound Avogadro::QtGui::PersistentAtom... Generating docs for compound Avogadro::QtGui::PersistentBond... Generating docs for compound Avogadro::QtGui::PluginLayerManager... Generating docs for compound Avogadro::QtGui::PythonScript... Generating docs for compound Avogadro::QtGui::RWAtom... Generating docs for compound Avogadro::QtGui::RWBond... Generating docs for compound Avogadro::QtGui::RWLayerManager... Generating docs for compound Avogadro::QtGui::RWMolecule... Generating docs for nested compound Avogadro::QtGui::RWMolecule::UndoCommand... Generating docs for compound Avogadro::QtGui::ScenePlugin... Generating docs for compound Avogadro::QtGui::ScenePluginFactory... Generating docs for compound Avogadro::QtGui::ScenePluginModel... Generating docs for compound Avogadro::QtGui::ScriptLoader... Generating docs for compound Avogadro::QtGui::ToolPlugin... Generating docs for compound Avogadro::QtGui::ToolPluginFactory... Generating docs for compound Avogadro::QtGui::ViewFactory... Generating docs for compound Avogadro::QtOpenGL::ActiveObjects... Generating docs for compound Avogadro::QtOpenGL::GLWidget... Generating docs for compound Avogadro::QtOpenGL::QtTextRenderStrategy... Generating docs for compound Avogadro::QuantumIO::GamessukOut... Generating docs for compound Avogadro::QuantumIO::GAMESSUSOutput... Generating docs for compound Avogadro::QuantumIO::GaussianCube... Generating docs for compound Avogadro::QuantumIO::GaussianFchk... Generating docs for compound Avogadro::QuantumIO::GenericOutput... Generating docs for compound Avogadro::QuantumIO::GUKBasisSet... Generating docs for compound Avogadro::QuantumIO::MoldenFile... Generating docs for compound Avogadro::QuantumIO::MopacAux... Generating docs for compound Avogadro::QuantumIO::NWChemJson... Generating docs for compound Avogadro::QuantumIO::NWChemLog... Generating docs for compound Avogadro::QuantumIO::ORCAOutput... Generating docs for compound Avogadro::Rendering::AmbientOcclusionSphereGeometry... Generating docs for compound Avogadro::Rendering::ArcSector... Generating docs for compound Avogadro::Rendering::ArcStrip... Generating docs for compound Avogadro::Rendering::ArrowGeometry... Generating docs for compound Avogadro::Rendering::BezierGeometry... Generating docs for compound Avogadro::Rendering::BSplineGeometry... Generating docs for compound Avogadro::Rendering::BufferObject... Generating docs for compound Avogadro::Rendering::Camera... Generating docs for compound Avogadro::Rendering::Cartoon... Generating docs for compound Avogadro::Rendering::ColorNormalVertex... Generating docs for compound Avogadro::Rendering::ColorTextureVertex... Generating docs for compound Avogadro::Rendering::CurveGeometry... Generating docs for compound Avogadro::Rendering::Cylinder... Generating docs for compound Avogadro::Rendering::CylinderColor... Generating docs for compound Avogadro::Rendering::CylinderGeometry... Generating docs for compound Avogadro::Rendering::DashedLineGeometry... Generating docs for nested compound Avogadro::Rendering::DashedLineGeometry::PackedVertex... Generating docs for compound Avogadro::Rendering::Drawable... Generating docs for compound Avogadro::Rendering::EigenData... Generating docs for compound Avogadro::Rendering::GeometryNode... Generating docs for compound Avogadro::Rendering::GeometryVisitor... Generating docs for compound Avogadro::Rendering::GLRenderer... Generating docs for compound Avogadro::Rendering::GLRenderVisitor... Generating docs for compound Avogadro::Rendering::GroupNode... Generating docs for nested compound Avogadro::Rendering::GroupNode::NodeInfo... Generating docs for compound Avogadro::Rendering::Identifier... Generating docs for compound Avogadro::Rendering::Line... Generating docs for compound Avogadro::Rendering::LineStripGeometry... Generating docs for nested compound Avogadro::Rendering::LineStripGeometry::PackedVertex... Generating docs for compound Avogadro::Rendering::MeshGeometry... Generating docs for nested compound Avogadro::Rendering::MeshGeometry::PackedVertex... Generating docs for compound Avogadro::Rendering::Node... Generating docs for compound Avogadro::Rendering::PLYVisitor... Generating docs for compound Avogadro::Rendering::Point... Generating docs for compound Avogadro::Rendering::POVRayVisitor... Generating docs for compound Avogadro::Rendering::Primitive... Generating docs for nested compound Avogadro::Rendering::Primitive::Identifier... Generating docs for compound Avogadro::Rendering::Quad... Generating docs for compound Avogadro::Rendering::QuadOutline... Generating docs for compound Avogadro::Rendering::Scene... Generating docs for compound Avogadro::Rendering::Shader... Generating docs for compound Avogadro::Rendering::ShaderInfo... Generating docs for compound Avogadro::Rendering::ShaderProgram... Generating docs for compound Avogadro::Rendering::SolidPipeline... Generating docs for compound Avogadro::Rendering::Sphere... Generating docs for compound Avogadro::Rendering::SphereColor... Generating docs for compound Avogadro::Rendering::SphereGeometry... Generating docs for compound Avogadro::Rendering::TextLabel2D... Generating docs for compound Avogadro::Rendering::TextLabel3D... Generating docs for compound Avogadro::Rendering::TextLabelBase... Generating docs for compound Avogadro::Rendering::TextProperties... Generating/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:60: warning: Member TextProperties(const TextProperties &other) (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:63: warning: Member operator=(TextProperties other) (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:64: warning: Member swap(TextProperties &other) (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:66: warning: Member operator==(const TextProperties &other) const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:67: warning: Member operator!=(const TextProperties &other) const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:76: warning: Member pixelHeight() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:83: warning: Member hAlign() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:90: warning: Member vAlign() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:102: warning: Member rotationDegreesCW() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:109: warning: Member fontFamily() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:116: warning: Member fontStyles() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:123: warning: Member bold() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:130: warning: Member italic() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:137: warning: Member underline() const (function) of class Avogadro::Rendering::TextProperties is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:113: warning: Member minFilter() const (function) of class Avogadro::Rendering::Texture2D is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:114: warning: Member setMagFilter(FilterOption opt) (function) of class Avogadro::Rendering::Texture2D is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:115: warning: Member magFilter() const (function) of class Avogadro::Rendering::Texture2D is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:157: warning: Member release() const (function) of class Avogadro::Rendering::Texture2D is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:159: warning: Member error() const (function) of class Avogadro::Rendering::Texture2D is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.h:25: warning: Member TransformNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::TransformNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:43: warning: Member GroupNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:96: warning: Member children() const (function) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:28: warning: Member NodeType (enumeration) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:109: warning: Member clear(NodeType type) (function) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:110: warning: Member m_children (variable) of class Avogadro::Rendering::GroupNode is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:47: warning: Member visit(GroupNode &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:48: warning: Member visit(GeometryNode &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:49: warning: Member visit(Drawable &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:50: warning: Member visit(SphereGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:52: warning: Member visit(CurveGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:53: warning: Member visit(CylinderGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:54: warning: Member visit(MeshGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:55: warning: Member visit(TextLabel2D &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:56: warning: Member visit(TextLabel3D &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:57: warning: Member visit(LineStripGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:29: warning: Member VRMLVisitor(const Camera &camera) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:32: warning: Member begin() (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:33: warning: Member end() (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:39: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:40: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:41: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:42: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:43: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:44: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:45: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:46: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:47: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:48: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:49: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:51: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:52: warning: Member camera() const (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:54: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:55: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:56: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::VRMLVisitor is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:19: warning: Member ChartDialog(QWidget *p=nullptr) (function) of class Avogadro::VTK::ChartDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:22: warning: Member chartWidget() (function) of class Avogadro::VTK::ChartDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:24: warning: Member sizeHint() const override (function) of class Avogadro::VTK::ChartDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:25: warning: Member minimumSizeHint() const override (function) of class Avogadro::VTK::ChartDialog is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:32: warning: Member Axis (enumeration) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:29: warning: Member ChartWidget(QWidget *p=nullptr) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:38: warning: Member addPlot(const std::vector< float > &x, const std::vector< float > &y, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:41: warning: Member addPlots(const std::vector< std::vector< float > > &plotData, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:44: warning: Member clearPlots() (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:46: warning: Member setXAxisTitle(const char *title) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:48: warning: Member setYAxisTitle(const char *title) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:50: warning: Member setTickLabels(Axis a, const std::vector< float > &tickPositions, const std::vector< std::string > &tickLabels) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:53: warning: Member setAxisLimits(Axis a, float min, float max) (function) of class Avogadro::VTK::ChartWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h:19: warning: Member QVTKWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::QVTKWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h:43: warning: Member vtkGLWidget(QWidget *p=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::vtkGLWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h:19: warning: Member QVTKWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::QVTKWidget is not documented. /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:44: warning: explicit link request to 'AtomType' could not be resolved /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:20: warning: explicit link request to 'BondType' could not be resolved /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: argument 'array' of command @param is not found in the argument list of ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: The following parameter of Avogadro::Calc::ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const is not documented: parameter 'points' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:126: warning: Unsupported xml/html tag found /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: argument 'custom' of command @param is not found in the argument list of ColorButton::setDialogTitle(const QString title="") /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: The following parameter of Avogadro::QtGui::ColorButton::setDialogTitle(const QString title="") is not documented: parameter 'title' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:98: warning: Found unknown command '\index' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:50: warning: The following parameter of Avogadro::Core::CrystalTools::rotateToStandardOrientation(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:65: warning: The following parameters of Avogadro::Core::CrystalTools::setVolume(Molecule &molecule, Real newVolume, Options opts=None) are not documented: parameter 'molecule' parameter 'newVolume' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:75: warning: The following parameter of Avogadro::Core::CrystalTools::niggliReduce(Molecule &molecule, Options opts=None) is not documented: parameter 'molecule' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:97: warning: The following parameter of Avogadro::Core::CrystalTools::buildSupercell(Molecule &molecule, unsigned int a, unsigned int b, unsigned int c) is not documented: parameter 'molecule' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:109: warning: The following parameters of Avogadro::Core::CrystalTools::setCellMatrix(Molecule &molecule, const Matrix3 &newCellColMatrix, Options opt=None) are not documented: parameter 'molecule' parameter 'newCellColMatrix' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:194: warning: The following parameter of Avogadro::Core::Cube::setValue(unsigned int i, float value) is not documented: parameter 'value' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) are not documented: parameter 'start' parameter 'end' parameter 'dashCount' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h:144: warning: The following parameter of Avogadro::QtGui::FileFormatDialog::selectFileFormat(QWidget *parentWidget, const std::vector< const Io::FileFormat * > &ffs, const QString &caption, const QString &prompt, const QString &settingsKey=QString(), const QString &formatPrefix=QString()) is not documented: parameter 'formatPrefix' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:319: warning: argument 'fmap' of command @param is not found in the argument list of FileFormatManager::filteredFormatFromFormatVector(FileFormat::Operations filter, const FormatIdVector &fvec) const /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:319: warning: The following parameter of Avogadro::Io::FileFormatManager::filteredFormatFromFormatVector(FileFormat::Operations filter, const FormatIdVector &fvec) const is not documented: parameter 'fvec' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:54: warning: The following parameter of Avogadro::Rendering::GroupNode::addChild(Node *node, NodeType ui=NodeType::GEOMETRY) is not documented: parameter 'ui' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:299: warning: Found unknown command '@data' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h:77: warning: The following parameters of Avogadro::QtGui::HydrogenTools::generateNewHydrogenPositions(const RWAtom &atom, int numberOfHydrogens, std::vector< Vector3 > &positions) are not documented: parameter 'atom' parameter 'numberOfHydrogens' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h:454: warning: The following parameter of Avogadro::MoleQueue::InputGenerator::InputGenerator(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:452: warning: The following parameter of Avogadro::QtGui::InterfaceScript::InterfaceScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:64: warning: argument 'color' of command @param is not found in the argument list of LineStripGeometry::addLineStrip(const Core::Array< Vector3f > &vertices, float lineWidth) docs for compound Avogadro::Rendering::TextRenderStrategy... Generating docs for compound Avogadro::Rendering::Texture2D... Generating docs for compound Avogadro::Rendering::TransformNode... Generating docs for compound Avogadro::Rendering::Visitor... Generating docs for compound Avogadro::Rendering::VolumeGeometry... Generating docs for compound Avogadro::Rendering::VRMLVisitor... Generating docs for compound Avogadro::VTK::ChartDialog... Generating docs for compound Avogadro::VTK::ChartWidget... Generating docs for compound Avogadro::VTK::QVTKWidget... Generating docs for compound Avogadro::VTK::vtkGLWidget... Generating graph info page... Generating directory documentation... Generating index page... Generating main page... Generating page index... Generating topic index... Generating module index... Generating module member index... Generating namespace index... Generating namespace member index... Generating concept index... Generating annotated compound index... Generating alphabetical compound index... Generating hierarchical class index... Generating member index... Generating file index... Generating file member index... Generating example index... finalizing index lists... writing tag file... Generating XML output... Generating XML output for class Avogadro::QtOpenGL::ActiveObjects Generating XML output for class Avogadro::Rendering::AmbientOcclusionSphereGeometry Generating XML output for class Avogadro::Core::AngleIterator Generating XML output for class Avogadro::Rendering::ArcSector Generating XML output for class Avogadro::Rendering::ArcStrip Generating XML output for class Avogadro::Core::Array Generating XML output for class Avogadro::Core::internal::ArrayRefContainer Generating XML output for class Avogadro::Core::ArraySet Generating XML output for class Avogadro::Rendering::ArrowGeometry Generating XML output for class Avogadro::Core::Atom Generating XML output for class Avogadro::Core::AtomTemplate Generating XML output for class Avogadro::Core::AtomTyper Generating XML output for class Avogadro::Core::AtomUtilities Generating XML output for class Avogadro::Core::AvoSpglib Generating XML output for class Avogadro::QtGui::BackgroundFileFormat Generating XML output for class Avogadro::Core::BasisSet Generating XML output for class Avogadro::MoleQueue::BatchJob Generating XML output for class Avogadro::Rendering::BezierGeometry Generating XML output for class Avogadro::Core::Bond Generating XML output for class Avogadro::Core::BondTemplate Generating XML output for class Avogadro::Rendering::BSplineGeometry Generating XML output for class Avogadro::Rendering::BufferObject Generating XML output for class Avogadro::Rendering::Camera Generating XML output for class Avogadro::Rendering::Cartoon Generating XML output for class Avogadro::Io::CaseInsensitiveComparator Generating XML output for class Avogadro::Calc::ChargeManager Generating XML output for class Avogadro::Calc::ChargeModel Generating XML output for class Avogadro::VTK::ChartDialog Generating XML output for class Avogadro::VTK::ChartWidget Generating XML output for class Avogadro::Io::CjsonFormat Generating XML output for class Avogadro::MoleQueue::Client Generating XML output for class Avogadro::Io::CmlFormat Generating XML output for class Avogadro::Core::Color3f Generating XML output for class Avogadro::QtGui::ColorButton Generating XML output for class Avogadro::Rendering::ColorNormalVertex Generating XML output for class Avogadro::Rendering::ColorTextureVertex Generating XML output for class Avogadro::QtGui::ContainerWidget Generating XML output for class Avogadro::Core::CoordinateBlockGenerator Generating XML output for class Avogadro::Core::CoordinateSet Generating XML output for class Avogadro::Core::CrystalTools Generating XML output for class Avogadro::Core::Cube Generating XML output for class Avogadro::Rendering::CurveGeometry Generating XML output for class Avogadro::QtGui::CustomElementDialog Generating XML output for class Avogadro::Rendering::Cylinder Generating XML output for class Avogadro::Rendering::CylinderColor Generating XML output for class Avogadro::Rendering::CylinderGeometry Generating XML output for class Avogadro::Rendering::DashedLineGeometry Generating XML output for class Avogadro::Io::DcdFormat Generating XML output for class Avogadro::Calc::DefaultModel Generating XML output for class Avogadro::Core::DihedralIterator Generating XML output for class Avogadro::Rendering::Drawable Generating XML output for class Avogadro::Rendering::EigenData Generating XML output for class Avogadro::QtGui::ElementDetail Generating XML output for class Avogadro::QtGui::ElementItem Generating XML output for class Avogadro::Core::Elements Generating XML output for class Avogadro::QtGui::ElementTranslator Generating XML output for class Avogadro::Calc::EnergyCalculator Generating XML output for class Avogadro::Calc::EnergyManager Generating XML output for class Avogadro::QtGui::ExtensionPlugin Generating XML output for class Avogadro::QtGui::ExtensionPluginFactory Generating XML output for class Avogadro::QtGui::FileBrowseWidget Generating XML output for class Avogadro::Io::FileFormat Generating XML output for class Avogadro::QtGui::FileFormatDialog Generating XML output for class Avogadro::Io::FileFormatManager Generating XML output for class Avogadro::Frustrum Generating XML output for class Avogadro::QuantumIO::GamessukOut Generating XML output for class Avogadro::QuantumIO::GAMESSUSOutput Generating XML output for class Avogadro::QuantumIO::GaussianCube Generating XML output for class Avogadro::QuantumIO::GaussianFchk Generating XML output for class Avogadro::Core::GaussianSet Generating XML output for class Avogadro::Core::GaussianSetTools Generating XML output for class Avogadro::QtGui::GenericHighlighter Generating XML output for class Avogadro::QuantumIO::GenericOutput Generating XML output for class Avogadro::Rendering::GeometryNode Generating XML output for class Avogadro::Rendering::GeometryVisitor Generating XML output for class Avogadro::Rendering::GLRenderer Generating XML output for class Avogadro::Rendering::GLRenderVisitor Generating XML output for class Avogadro::QtOpenGL::GLWidget Generating XML output for class Avogadro::Core::Graph Generating XML output for class Avogadro::Io::GromacsFormat Generating XML output for class Avogadro::Rendering::GroupNode Generating XML output for class Avogadro::QuantumIO::GUKBasisSet Generating XML output for class Avogadro::Core::hBondRecord Generating XML output for class Avogadro::Io::Hdf5DataFormat Generating XML output for class Avogadro::Core::ArraySet::Holder Generating XML output for class Avogadro::QtGui::HydrogenTools Generating XML output for class Avogadro::Rendering::Identifier Generating XML output for class Avogadro::Rendering::Primitive::Identifier Generating XML output for class Avogadro::MoleQueue::InputGenerator Generating XML output for class Avogadro::MoleQueue::InputGeneratorDialog Generating XML output for class Avogadro::MoleQueue::InputGeneratorWidget Generating XML output for class Avogadro::QtGui::InterfaceScript Generating XML output for class Avogadro::QtGui::InterfaceWidget Generating XML output for class Avogadro::MoleQueue::JobObject Generating XML output for class Avogadro::MoleQueue::JsonRpcClient Generating XML output for class Avogadro::QtGui::JsonWidget Generating XML output for class Avogadro::Io::LammpsDataFormat Generating XML output for class Avogadro::Io::LammpsTrajectoryFormat Generating XML output for class Avogadro::Core::Layer Generating XML output for class Avogadro::Core::LayerData Generating XML output for class Avogadro::Core::LayerManager Generating XML output for class Avogadro::QtGui::LayerModel Generating XML output for class Avogadro::Calc::LennardJones Generating XML output for class Avogadro::Rendering::Line Generating XML output for class Avogadro::Rendering::LineStripGeometry Generating XML output for class Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare Generating XML output for class Avogadro::Io::MdlFormat Generating XML output for class Avogadro::Core::Mesh Generating XML output for class Avogadro::QtGui::MeshGenerator Generat/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:52: warning: The following parameters of Avogadro::QtGui::MeshGenerator::MeshGenerator(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false, QObject *parent=nullptr) are not documented: parameter 'reverse' parameter 'parent' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:68: warning: The following parameter of Avogadro::QtGui::MeshGenerator::initialize(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false) is not documented: parameter 'reverse' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:125: warning: The following parameter of Avogadro::QtGui::MeshGenerator::offset(float val1, float val2) is not documented: parameter 'val2' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:67: warning: argument 'colors' of command @param is not found in the argument list of MeshGeometry::addVertices(const Core::Array< Vector3f > &vertices, const Core::Array< Vector3f > &normals) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'a' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'b' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: The following parameters of Avogadro::QtGui::Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) are not documented: parameter 'atomId1' parameter 'atomId2' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: argument 'scriptFilePath_' of command @param is not found in the argument list of PythonScript::PythonScript(QObject *parent_=nullptr) /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(QObject *parent_=nullptr) is not documented: parameter 'parent_' /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:628: warning: The following parameter of Avogadro::QtGui::RWMolecule::setForceVector(Index atomId, const Vector3 &pos, const QString &undoText=QStringLiteral("Change Force Vectors")) is not documented: parameter 'atomId' ing XML output for class Avogadro::Rendering::MeshGeometry Generating XML output for class Avogadro::Io::MMTFFormat Generating XML output for class Avogadro::QuantumIO::MoldenFile Generating XML output for class Avogadro::Core::Molecule Generating XML output for class Avogadro::QtGui::Molecule Generating XML output for class Avogadro::Core::MoleculeInfo Generating XML output for class Avogadro::QtGui::MoleculeModel Generating XML output for class Avogadro::QtGui::MoleculeSystem Generating XML output for class Avogadro::MoleQueue::MoleQueueDialog Generating XML output for class Avogadro::MoleQueue::MoleQueueManager Generating XML output for class Avogadro::MoleQueue::MoleQueueQueueListModel Generating XML output for class Avogadro::MoleQueue::MoleQueueWidget Generating XML output for class Avogadro::QuantumIO::MopacAux Generating XML output for class Avogadro::QtGui::MultiViewWidget Generating XML output for class Avogadro::Core::Mutex Generating XML output for class Avogadro::Core::NameAtomTyper Generating XML output for class Avogadro::Core::NeighborPerceiver Generating XML output for class Avogadro::Rendering::Node Generating XML output for class Avogadro::Rendering::GroupNode::NodeInfo Generating XML output for class Avogadro::QuantumIO::NWChemJson Generating XML output for class Avogadro::QuantumIO::NWChemLog Generating XML output for class Avogadro::QuantumIO::ORCAOutput Generating XML output for class Avogadro::Io::OutcarFormat Generating XML output for class Avogadro::Rendering::DashedLineGeometry::PackedVertex Generating XML output for class Avogadro::Rendering::LineStripGeometry::PackedVertex Generating XML output for class Avogadro::Rendering::MeshGeometry::PackedVertex Generating XML output for class Avogadro::Io::PdbFormat Generating XML output for class Avogadro::QtGui::PeriodicTableScene Generating XML output for class Avogadro::QtGui::PeriodicTableView Generating XML output for class Avogadro::QtGui::PersistentAtom Generating XML output for class Avogadro::QtGui::PersistentBond Generating XML output for class Avogadro::Core::ArraySet::PlaceHolder Generating XML output for class Avogadro::QtGui::PluginLayerManager Generating XML output for class Avogadro::Rendering::PLYVisitor Generating XML output for class Avogadro::Rendering::Point Generating XML output for class Avogadro::Io::PoscarFormat Generating XML output for class Avogadro::Rendering::POVRayVisitor Generating XML output for class Avogadro::Rendering::Primitive Generating XML output for class Avogadro::QtGui::PythonScript Generating XML output for class Avogadro::QtOpenGL::QtTextRenderStrategy Generating XML output for class Avogadro::Rendering::Quad Generating XML output for class Avogadro::Rendering::QuadOutline Generating XML output for class Avogadro::VTK::QVTKWidget Generating XML output for class Avogadro::MoleQueue::BatchJob::Request Generating XML output for class Avogadro::Core::Residue Generating XML output for class Avogadro::Core::ResidueData Generating XML output for class Avogadro::Core::RingPerceiver Generating XML output for class Avogadro::QtGui::GenericHighlighter::Rule Generating XML output for class Avogadro::QtGui::RWAtom Generating XML output for class Avogadro::QtGui::RWBond Generating XML output for class Avogadro::QtGui::RWLayerManager Generating XML output for class Avogadro::QtGui::RWMolecule Generating XML output for class Avogadro::Rendering::Scene Generating XML output for class Avogadro::QtGui::ScenePlugin Generating XML output for class Avogadro::QtGui::ScenePluginFactory Generating XML output for class Avogadro::QtGui::ScenePluginModel Generating XML output for class Avogadro::QtGui::ScriptLoader Generating XML output for class Avogadro::Core::SecondaryStructureAssigner Generating XML output for class Avogadro::Rendering::Shader Generating XML output for class Avogadro::Rendering::ShaderInfo Generating XML output for class Avogadro::Rendering::ShaderProgram Generating XML output for class Avogadro::Core::SharedMutex Generating XML output for class Avogadro::Core::SlaterSet Generating XML output for class Avogadro::Core::SlaterSetTools Generating XML output for class Avogadro::Rendering::SolidPipeline Generating XML output for class Avogadro::Core::SpaceGroups Generating XML output for class Avogadro::Rendering::Sphere Generating XML output for class Avogadro::Rendering::SphereColor Generating XML output for class Avogadro::Rendering::SphereGeometry Generating XML output for class Avogadro::Core::SymbolAtomTyper Generating XML output for class Avogadro::Rendering::TextLabel2D Generating XML output for class Avogadro::Rendering::TextLabel3D Generating XML output for class Avogadro::Rendering::TextLabelBase Generating XML output for class Avogadro::Rendering::TextProperties Generating XML output for class Avogadro::Rendering::TextRenderStrategy Generating XML output for class Avogadro::Rendering::Texture2D Generating XML output for class Avogadro::QtGui::ToolPlugin Generating XML output for class Avogadro::QtGui::ToolPluginFactory Generating XML output for class Avogadro::Rendering::TransformNode Generating XML output for class Avogadro::Io::TrrFormat Generating XML output for class Avogadro::Io::TurbomoleFormat Generating XML output for class Avogadro::TypeTraits Generating XML output for class Avogadro::TypeTraits< char > Generating XML output for class Avogadro::TypeTraits< double > Generating XML output for class Avogadro::TypeTraits< float > Generating XML output for class Avogadro::TypeTraits< int > Generating XML output for class Avogadro::TypeTraits< short > Generating XML output for class Avogadro::TypeTraits< unsigned char > Generating XML output for class Avogadro::TypeTraits< unsigned int > Generating XML output for class Avogadro::TypeTraits< unsigned short > Generating XML output for class Avogadro::QtGui::RWMolecule::UndoCommand Generating XML output for class Avogadro::Core::UnitCell Generating XML output for class Avogadro::Core::Variant Generating XML output for class Avogadro::Core::VariantMap Generating XML output for class Avogadro::QtGui::ViewFactory Generating XML output for class Avogadro::Rendering::Visitor Generating XML output for class Avogadro::Rendering::VolumeGeometry Generating XML output for class Avogadro::Rendering::VRMLVisitor Generating XML output for class vtkAvogadroActor Generating XML output for class Avogadro::VTK::vtkGLWidget Generating XML output for class Avogadro::Io::XyzFormat Generating XML output for namespace Avogadro Generating XML output for namespace Avogadro::Calc Generating XML output for namespace Avogadro::Core Generating XML output for namespace Avogadro::Core::internal Generating XML output for namespace Avogadro::Io Generating XML output for namespace Avogadro::MoleQueue Generating XML output for namespace Avogadro::MoleQueue::Ui Generating XML output for namespace Avogadro::QtGui Generating XML output for namespace Avogadro::QtGui::@110 Generating XML output for namespace Avogadro::QtGui::Ui Generating XML output for namespace Avogadro::QtGui::Utilities Generating XML output for namespace Avogadro::QtOpenGL Generating XML output for namespace Avogadro::QtPlugins Generating XML output for namespace Avogadro::QuantumIO Generating XML output for namespace Avogadro::Rendering Generating XML output for namespace Avogadro::VTK Generating XML output for namespace cppoptlib Generating XML output for namespace QtPlugins Generating XML output for namespace std Generating XML output for file chargemanager.h Generating XML output for file chargemodel.h Generating XML output for file defaultmodel.h Generating XML output for file energycalculator.h Generating XML output for file energymanager.h Generating XML output for file lennardjones.h Generating XML output for file lennardjonesdata.h Generating XML output for file angleiterator.h Generating XML output for file angletools.h Generating XML output for file array.h Generating XML output for file atom.h Generating XML output for file atomtyper-inline.h Generating XML output for file atomtyper.h Generating XML output for file atomutilities.h Generating XML output for file avogadrocore.h Generating XML output for file avospglib.h Generating XML output for file basisset.h Generating XML output for file bond.h Generating XML output for file color3f.h Generating XML output for file coordinateblockgenerator.h Generating XML output for file coordinateset.h Generating XML output for file crystaltools.h Generating XML output for file cube.h Generating XML output for file dihedraliterator.h Generating XML output for file elementdata.h Generating XML output for file elements.h Generating XML output for file gaussianset.h Generating XML output for file gaussiansettools.h Generating XML output for file graph.h Generating XML output for file layer.h Generating XML output for file layermanager.h Generating XML output for file matrix.h Generating XML output for file mdlvalence_p.h Generating XML output for file mesh.h Generating XML output for file mutex.h Generating XML output for file nameatomtyper.h Generating XML output for file neighborperceiver.h Generating XML output for file residue.h Generating XML output for file residuecolors.h Generating XML output for file residuedata.h Generating XML output for file ringperceiver.h Generating XML output for file secondarystructure.h Generating XML output for file sharedmutex.h Generating XML output for file slaterset.h Generating XML output for file slatersettools.h Generating XML output for file spacegroupdata.h Generating XML output for file spacegroups.h Generating XML output for file symbolatomtyper.h Generating XML output for file types.h Generating XML output for file unitcell.h Generating XML output for file variant-inline.h Generating XML output for file variant.h Generating XML output for file variantmap.h Generating XML output for file vector.h Generating XML output for file cjsonformat.h Generating XML output for file cmlformat.h Generating XML output for file dcdformat.h Generating XML output for file fileformat.h Generating XML output for file fileformatmanager.h Generating XML output for file gromacsformat.h Generating XML output for file hdf5dataformat.h Generating XML output for file lammpsformat.h Generating XML output for file mdlformat.h Generating XML output for file mmtfformat.h Generating XML output for file pdbformat.h Generating XML output for file trrformat.h Generating XML output for file turbomoleformat.h Generating XML output for file vaspformat.h Generating XML output for file xyzformat.h Generating XML output for file batchjob.h Generating XML output for file client.h Generating XML output for file jobobject.h Generating XML output for file jsonrpcclient.h Generating XML output for file inputgenerator.h Generating XML output for file inputgeneratordialog.h Generating XML output for file inputgeneratorwidget.h Generating XML output for file molequeuedialog.h Generating XML output for file molequeuemanager.h Generating XML output for file molequeuequeuelistmodel.h Generating XML output for file molequeuewidget.h Generating XML output for file backgroundfileformat.h Generating XML output for file colorbutton.h Generating XML output for file containerwidget.h Generating XML output for file customelementdialog.h Generating XML output for file elementdetail_p.h Generating XML output for file elementitem_p.h Generating XML output for file elementtranslator.h Generating XML output for file extensionplugin.h Generating XML output for file filebrowsewidget.h Generating XML output for file fileformatdialog.h Generating XML output for file generichighlighter.h Generating XML output for file hydrogentools.h Generating XML output for file interfacescript.h Generating XML output for file interfacewidget.h Generating XML output for file jsonwidget.h Generating XML output for file layermodel.h Generating XML output for file meshgenerator.h Generating XML output for file core/molecule.h Generating XML output for file qtgui/molecule.h Generating XML output for file moleculemodel.h Generating XML output for file multiviewwidget.h Generating XML output for file periodictablescene_p.h Generating XML output for file periodictableview.h Generating XML output for file persistentatom.h Generating XML output for file persistentbond.h Generating XML output for file pluginlayermanager.h Generating XML output for file pythonscript.h Generating XML output for file rwlayermanager.h Generating XML output for file rwmolecule.h Generating XML output for file rwmolecule_undo.h Generating XML output for file sceneplugin.h Generating XML output for file scenepluginmodel.h Generating XML output for file scriptloader.h Generating XML output for file toolplugin.h Generating XML output for file core/utilities.h Generating XML output for file qtgui/utilities.h Generating XML output for file viewfactory.h Generating XML output for file activeobjects.h Generating XML output for file glwidget.h Generating XML output for file qttextrenderstrategy.h Generating XML output for file gamessukout.h Generating XML output for file gamessus.h Generating XML output for file gaussiancube.h Generating XML output for file gaussianfchk.h Generating XML output for file genericoutput.h Generating XML output for file molden.h Generating XML output for file mopacaux.h Generating XML output for file nwchemjson.h Generating XML output for file nwchemlog.h Generating XML output for file orca.h Generating XML output for file ambientocclusionspheregeometry.h Generating XML output for file arcsector.h Generating XML output for file arcstrip.h Generating XML output for file arrowgeometry.h Generating XML output for file avogadrogl.h Generating XML output for file avogadrorendering.h Generating XML output for file beziergeometry.h Generating XML output for file bsplinegeometry.h Generating XML output for file bufferobject.h Generating XML output for file camera.h Generating XML output for file cartoongeometry.h Generating XML output for file curvegeometry.h Generating XML output for file cylindergeometry.h Generating XML output for file dashedlinegeometry.h Generating XML output for file drawable.h Generating XML output for file geometrynode.h Generating XML output for file geometryvisitor.h Generating XML output for file glrenderer.h Generating XML output for file glrendervisitor.h Generating XML output for file groupnode.h Generating XML output for file linestripgeometry.h Generating XML output for file meshgeometry.h Generating XML output for file node.h Generating XML output for file plyvisitor.h Generating XML output for file povrayvisitor.h Generating XML output for file primitive.h Generating XML output for file quad.h Generating XML output for file quadoutline.h Generating XML output for file scene.h Generating XML output for file shader.h Generating XML output for file shaderprogram.h Generating XML output for file solidpipeline.h Generating XML output for file spheregeometry.h Generating XML output for file textlabel2d.h Generating XML output for file textlabel3d.h Generating XML output for file textlabelbase.h Generating XML output for file textproperties.h Generating XML output for file textrenderstrategy.h Generating XML output for file texture2d.h Generating XML output for file transformnode.h Generating XML output for file visitor.h Generating XML output for file volumegeometry.h Generating XML output for file vrmlvisitor.h Generating XML output for file chartdialog.h Generating XML output for file chartwidget.h Generating XML output for file qvtkwidget.h Generating XML output for file vtkAvogadroActor.h Generating XML output for file vtkglwidget.h Generating XML output for file mainpage.dox Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/docs/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/ Generating XML output for the main page Running plantuml with JAVA... type lookup cache used 9275/65536 hits=39950 misses=10973 symbol lookup cache used 8448/65536 hits=70232 misses=8448 finished... ~/build/BUILD/avogadrolibs-1.98.1 + popd + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.frg04A + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le '!=' / ']' + rm -rf /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le ++ dirname /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -mcpu=power8 -mtune=power8 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd avogadrolibs-1.98.1 + /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le 'INSTALL=/usr/bin/install -p' -C build make: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/cmake -S/builddir/build/BUILD/avogadrolibs-1.98.1 -B/builddir/build/BUILD/avogadrolibs-1.98.1/build --check-build-system CMakeFiles/Makefile.cmake 0 /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles /builddir/build/BUILD/avogadrolibs-1.98.1/build//CMakeFiles/progress.marks /usr/bin/make -f CMakeFiles/Makefile2 all make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/CMakeFiles/pugixml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'thirdparty/CMakeFiles/pugixml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 0%] Built target pugixml /usr/bin/make -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/CMakeFiles/struct.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'thirdparty/CMakeFiles/struct.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 1%] Built target struct /usr/bin/make -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi/CMakeFiles/gwavi.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'thirdparty/libgwavi/CMakeFiles/gwavi.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target gwavi /usr/bin/make -f avogadro/core/CMakeFiles/Headers.dir/build.make avogadro/core/CMakeFiles/Headers.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core/CMakeFiles/Headers.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/core/CMakeFiles/Headers.dir/build.make avogadro/core/CMakeFiles/Headers.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/core/CMakeFiles/Headers.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target Headers /usr/bin/make -f utilities/bodr/CMakeFiles/bodrparse.dir/build.make utilities/bodr/CMakeFiles/bodrparse.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/bodr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr/CMakeFiles/bodrparse.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/bodr/CMakeFiles/bodrparse.dir/build.make utilities/bodr/CMakeFiles/bodrparse.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'utilities/bodr/CMakeFiles/bodrparse.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target bodrparse /usr/bin/make -f utilities/encodefile/CMakeFiles/encodefile.dir/build.make utilities/encodefile/CMakeFiles/encodefile.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/encodefile/CMakeFiles/encodefile.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/encodefile/CMakeFiles/encodefile.dir/build.make utilities/encodefile/CMakeFiles/encodefile.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'utilities/encodefile/CMakeFiles/encodefile.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target encodefile /usr/bin/make -f utilities/resdata/CMakeFiles/resdataparse.dir/build.make utilities/resdata/CMakeFiles/resdataparse.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/resdata /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata/CMakeFiles/resdataparse.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f utilities/resdata/CMakeFiles/resdataparse.dir/build.make utilities/resdata/CMakeFiles/resdataparse.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'utilities/resdata/CMakeFiles/resdataparse.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 2%] Built target resdataparse /usr/bin/make -f avogadro/core/CMakeFiles/Core.dir/build.make avogadro/core/CMakeFiles/Core.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core/CMakeFiles/Core.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/core/CMakeFiles/Core.dir/build.make avogadro/core/CMakeFiles/Core.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/core/CMakeFiles/Core.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 7%] Built target Core /usr/bin/make -f avogadro/calc/CMakeFiles/Calc.dir/build.make avogadro/calc/CMakeFiles/Calc.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc/CMakeFiles/Calc.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/calc/CMakeFiles/Calc.dir/build.make avogadro/calc/CMakeFiles/Calc.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/calc/CMakeFiles/Calc.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 9%] Built target Calc /usr/bin/make -f avogadro/io/CMakeFiles/IO.dir/build.make avogadro/io/CMakeFiles/IO.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io/CMakeFiles/IO.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/io/CMakeFiles/IO.dir/build.make avogadro/io/CMakeFiles/IO.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/io/CMakeFiles/IO.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 12%] Built target IO /usr/bin/make -f avogadro/quantumio/CMakeFiles/QuantumIO.dir/build.make avogadro/quantumio/CMakeFiles/QuantumIO.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio/CMakeFiles/QuantumIO.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/quantumio/CMakeFiles/QuantumIO.dir/build.make avogadro/quantumio/CMakeFiles/QuantumIO.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/quantumio/CMakeFiles/QuantumIO.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 14%] Built target QuantumIO /usr/bin/make -f avogadro/command/CMakeFiles/avocjsontocml.dir/build.make avogadro/command/CMakeFiles/avocjsontocml.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/avocjsontocml.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/avocjsontocml.dir/build.make avogadro/command/CMakeFiles/avocjsontocml.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/command/CMakeFiles/avocjsontocml.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 14%] Built target avocjsontocml /usr/bin/make -f avogadro/command/CMakeFiles/avobabel.dir/build.make avogadro/command/CMakeFiles/avobabel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/avobabel.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/avobabel.dir/build.make avogadro/command/CMakeFiles/avobabel.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/command/CMakeFiles/avobabel.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 15%] Built target avobabel /usr/bin/make -f avogadro/command/CMakeFiles/qube.dir/build.make avogadro/command/CMakeFiles/qube.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/qube.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/command/CMakeFiles/qube.dir/build.make avogadro/command/CMakeFiles/qube.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/command/CMakeFiles/qube.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 16%] Built target qube /usr/bin/make -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/CMakeFiles/Rendering.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/rendering/CMakeFiles/Rendering.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Built target Rendering /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Automatic MOC for target QtGui cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 27%] Built target QtGui_autogen /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtgui/CMakeFiles/QtGui.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Built target QtGui /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Automatic MOC for target QtOpenGL cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 33%] Built target QtOpenGL_autogen /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target QtOpenGL /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Automatic MOC for target MoleQueue cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 34%] Built target MoleQueue_autogen /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/molequeue/CMakeFiles/MoleQueue.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target MoleQueue /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Automatic MOC for target QTAIMScenePlugin cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target QTAIMScenePlugin_autogen /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target QTAIMScenePlugin /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Automatic MOC for target ThreeDMol cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 37%] Built target ThreeDMol_autogen /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 38%] Built target ThreeDMol /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 39%] Automatic MOC for target ApplyColors cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 39%] Built target ApplyColors_autogen /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 39%] Built target ApplyColors /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Automatic MOC for target AlignTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Built target AlignTool_autogen /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 40%] Built target AlignTool /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Automatic MOC for target BondCentric cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 41%] Built target BondCentric_autogen /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target BondCentric /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Automatic MOC for target Bonding cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target Bonding_autogen /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target Bonding /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Automatic MOC for target Cartoons cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target Cartoons_autogen /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target Cartoons /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Automatic MOC for target Centroid cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 42%] Built target Centroid_autogen /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Built target Centroid /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Automatic MOC for target CopyPaste cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 43%] Built target CopyPaste_autogen /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Built target CopyPaste /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Automatic MOC for target Crystal cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 44%] Built target Crystal_autogen /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Built target Crystal /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Automatic MOC for target CrystalScene cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 46%] Built target CrystalScene_autogen /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Built target CrystalScene /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Automatic MOC for target CustomElements cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 47%] Built target CustomElements_autogen /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 48%] Built target CustomElements /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 48%] Automatic MOC for target Editor cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 48%] Built target Editor_autogen /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Built target Editor /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Automatic MOC for target FetchPDB cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 49%] Built target FetchPDB_autogen /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Built target FetchPDB /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Automatic MOC for target Focus cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 50%] Built target Focus_autogen /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 51%] Built target Focus /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 51%] Automatic MOC for target Forcefield cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 51%] Built target Forcefield_autogen /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Built target Forcefield /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Automatic MOC for target Hydrogens cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 52%] Built target Hydrogens_autogen /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Built target Hydrogens /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Automatic MOC for target ImportPQR cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 53%] Built target ImportPQR_autogen /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Built target ImportPQR /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Automatic MOC for target NucleicInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 54%] Built target NucleicInput_autogen /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Built target NucleicInput /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Automatic MOC for target Label cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 55%] Built target Label_autogen /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/label/CMakeFiles/Label.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 56%] Built target Label /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 56%] Automatic MOC for target LabelEditor cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 56%] Built target LabelEditor_autogen /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Built target LabelEditor /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Automatic MOC for target LineFormatInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 57%] Built target LineFormatInput_autogen /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Built target LineFormatInput /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Automatic MOC for target Manipulator cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 58%] Built target Manipulator_autogen /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 59%] Built target Manipulator /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 60%] Automatic MOC for target MeasureTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 60%] Built target MeasureTool_autogen /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Built target MeasureTool /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Automatic MOC for target Navigator cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 61%] Built target Navigator_autogen /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Built target Navigator /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Automatic MOC for target NetworkDatabases cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 62%] Built target NetworkDatabases_autogen /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 63%] Built target NetworkDatabases /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 64%] Automatic MOC for target OpenBabel cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 64%] Built target OpenBabel_autogen /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Built target OpenBabel /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Automatic MOC for target PlayerTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 65%] Built target PlayerTool_autogen /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Built target PlayerTool /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Automatic MOC for target PLY cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Built target PLY_autogen /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Built target PLY /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Automatic MOC for target POVRay cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 66%] Built target POVRay_autogen /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 67%] Built target POVRay /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Automatic MOC for target PropertyTables cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Built target PropertyTables_autogen /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Built target PropertyTables /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Automatic MOC for target ResetView cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Built target ResetView_autogen /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Built target ResetView /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Automatic MOC for target Select cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 68%] Built target Select_autogen /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/select/CMakeFiles/Select.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Built target Select /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Automatic MOC for target Selection cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 69%] Built target Selection_autogen /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Built target Selection /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Automatic MOC for target SpaceGroup cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 70%] Built target SpaceGroup_autogen /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Built target SpaceGroup /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Automatic MOC for target Surfaces cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 71%] Built target Surfaces_autogen /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Built target Surfaces /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Automatic MOC for target LammpsInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 73%] Built target LammpsInput_autogen /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Built target LammpsInput /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Automatic MOC for target OpenMMInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 74%] Built target OpenMMInput_autogen /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Built target OpenMMInput /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Automatic MOC for target CoordinateEditor cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 75%] Built target CoordinateEditor_autogen /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Built target CoordinateEditor /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Automatic MOC for target InsertFragment cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 76%] Built target InsertFragment_autogen /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Built target InsertFragment /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Automatic MOC for target MolecularProperties cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 77%] Built target MolecularProperties_autogen /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Built target MolecularProperties /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Automatic MOC for target SVG cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 78%] Built target SVG_autogen /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Built target SVG /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Automatic MOC for target Spectra cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 79%] Built target Spectra_autogen /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Built target Spectra /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Automatic MOC for target TemplateTool cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 80%] Built target TemplateTool_autogen /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Built target TemplateTool /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Automatic MOC for target VRML cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 81%] Built target VRML_autogen /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Built target VRML /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Automatic MOC for target apbs cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 82%] Built target apbs_autogen /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Built target apbs /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Automatic MOC for target Cp2kInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 83%] Built target Cp2kInput_autogen /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Built target Cp2kInput /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Automatic MOC for target GamessInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 84%] Built target GamessInput_autogen /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Built target GamessInput /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Automatic MOC for target commands cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 85%] Built target commands_autogen /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Built target commands /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Automatic MOC for target QuantumInput cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Built target QuantumInput_autogen /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Built target QuantumInput /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Automatic MOC for target ScriptCharges cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 86%] Built target ScriptCharges_autogen /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 87%] Built target ScriptCharges /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 87%] Automatic MOC for target ScriptFileFormats cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 87%] Built target ScriptFileFormats_autogen /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 88%] Built target ScriptFileFormats /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Automatic MOC for target PluginDownloader cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 89%] Built target PluginDownloader_autogen /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Built target PluginDownloader /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Automatic MOC for target BallStick cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Built target BallStick_autogen /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Built target BallStick /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Automatic MOC for target CloseContacts cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 90%] Built target CloseContacts_autogen /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 91%] Built target CloseContacts /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Automatic MOC for target Force cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Built target Force_autogen /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/force/CMakeFiles/Force.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Built target Force /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Automatic MOC for target Licorice cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 92%] Built target Licorice_autogen /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Built target Licorice /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Automatic MOC for target Meshes cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Built target Meshes_autogen /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Built target Meshes /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Automatic MOC for target NonCovalent cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 93%] Built target NonCovalent_autogen /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Built target NonCovalent /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Automatic MOC for target VanDerWaals cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 94%] Built target VanDerWaals_autogen /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Built target VanDerWaals /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Automatic MOC for target Wireframe cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 95%] Built target Wireframe_autogen /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 96%] Built target Wireframe /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 97%] Automatic MOC for target OverlayAxes cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 97%] Built target OverlayAxes_autogen /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 97%] Built target OverlayAxes /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Automatic MOC for target QTAIMExtension cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 98%] Built target QTAIMExtension_autogen /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Built target QTAIMExtension /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Automatic MOC for target QtPlugins cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/AutogenInfo.json Release make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [ 99%] Built target QtPlugins_autogen /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/depend make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins.dir/DependInfo.cmake "--color=" make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/make -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[2]: Nothing to be done for 'avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build'. make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' [100%] Built target QtPlugins make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' /usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles 0 /usr/bin/make -f CMakeFiles/Makefile2 preinstall make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' make[1]: Nothing to be done for 'preinstall'. make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' Install the project... /usr/bin/cmake -P cmake_install.cmake -- Install configuration: "Release" -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/libgwavi.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/angletools.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/angleiterator.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/array.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/avogadrocore.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/color3f.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/coordinateset.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/matrix.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/types.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/utilities.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/vector.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCore.so.1.98.1 -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCore.so.1 -- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCore.so.1.98.1" to "/usr/lib64" -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCore.so -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/atom.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/atomtyper.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/atomtyper-inline.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/atomutilities.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/basisset.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/bond.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/coordinateblockgenerator.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/crystaltools.h -- Installing: 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Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/mesh.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/molecule.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/mutex.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/nameatomtyper.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/neighborperceiver.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/residue.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/core/ringperceiver.h -- Installing: 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of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCalc.so.1.98.1" to "/usr/lib64" -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCalc.so -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/calc/chargemodel.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/calc/chargemanager.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/calc/defaultmodel.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/calc/energycalculator.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/calc/energymanager.h -- Installing: 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/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/dcdformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/fileformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/fileformatmanager.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/gromacsformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/mdlformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/vaspformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/pdbformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/xyzformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/trrformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/turbomoleformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/lammpsformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/hdf5dataformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/mmtfformat.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/io/avogadroioexport.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQuantumIO.so.1.98.1 -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQuantumIO.so.1 -- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQuantumIO.so.1.98.1" to "/usr/lib64" -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQuantumIO.so -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/gamessus.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/gaussianfchk.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/gaussiancube.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/genericoutput.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/molden.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/mopacaux.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/nwchemjson.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/nwchemlog.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/orca.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/quantumio/avogadroquantumioexport.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroRendering.so.1.98.1 -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroRendering.so.1 -- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroRendering.so.1.98.1" to "/usr/lib64" -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroRendering.so -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/arcsector.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/arcstrip.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/arrowgeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/avogadrogl.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/avogadrorendering.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/beziergeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/bsplinegeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/bufferobject.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/camera.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/cartoongeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/curvegeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/cylindergeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/dashedlinegeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/drawable.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/geometrynode.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/geometryvisitor.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/groupnode.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/glrenderer.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/glrendervisitor.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/linestripgeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/meshgeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/node.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/plyvisitor.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/povrayvisitor.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/primitive.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/quad.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/quadoutline.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/scene.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/shader.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/shaderprogram.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/solidpipeline.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/spheregeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/textlabel2d.h -- Installing: 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/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/volumegeometry.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/vrmlvisitor.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/rendering/avogadrorenderingexport.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtGui.so.1.98.1 -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtGui.so.1 -- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtGui.so.1.98.1" to "/usr/lib64" -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtGui.so -- Installing: 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Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/qtopengl/activeobjects.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/qtopengl/glwidget.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/qtopengl/qttextrenderstrategy.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/qtopengl/avogadroqtopenglexport.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroMoleQueue.so.1.98.1 -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroMoleQueue.so.1 -- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroMoleQueue.so.1.98.1" to "/usr/lib64" -- Installing: 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/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/molequeue/molequeuequeuelistmodel.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/molequeue/molequeuewidget.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/include/avogadro2/avogadro/molequeue/avogadromolequeueexport.h -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/ThreeDMol.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/ApplyColors.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/AlignTool.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/BondCentric.a -- Installing: 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/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/scripts/energy/mmff94.py -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/scripts/energy/uff.py -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/Hydrogens.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/ImportPQR.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/NucleicInput.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/Label.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/LabelEditor.a -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/staticplugins/LineFormatInput.a -- Installing: 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/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/cmake/avogadrolibs/AvogadroLibsConfigVersion.cmake -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/cmake/avogadrolibs/FindEigen3.cmake -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/cmake/avogadrolibs/Findlibmsym.cmake -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/cmake/avogadrolibs/AvogadroLibsTargets.cmake -- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/cmake/avogadrolibs/AvogadroLibsTargets-release.cmake make: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build' + cp -a /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/scripts /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/ + /usr/bin/python3 /usr/lib/rpm/redhat/pathfix.py -pn -i /usr/bin/python3 /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/antechamber.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/xtb.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/ani2x.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gaff.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn1.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn2.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfnff.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/mmff94.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/uff.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/antechamber.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/xtb.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/ani2x.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gaff.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn1.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn2.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfnff.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/mmff94.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/uff.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py: no change /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py: no change + ln -sf /usr/lib64/python3.12/site-packages/avogadro2/scripts /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/avogadro2/scripts + chrpath -d /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCalc.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroCore.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroIO.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroMoleQueue.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtGui.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtOpenGL.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQtPlugins.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroQuantumIO.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/libAvogadroRendering.so + rm -rf /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.98.1-1.fc40 --unique-debug-suffix -1.98.1-1.fc40.ppc64le --unique-debug-src-base avogadro2-libs-1.98.1-1.fc40.ppc64le --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/avogadrolibs-1.98.1 find-debuginfo: starting Extracting debug info from 9 files DWARF-compressing 9 files sepdebugcrcfix: Updated 9 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/avogadro2-libs-1.98.1-1.fc40.ppc64le 17363 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/antechamber.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/xtb.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/uff.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/mmff94.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfnff.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn2.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn1.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gaff.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/ani2x.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/charges/antechamber.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/charges/xtb.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/uff.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/mmff94.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/gfnff.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/gfn2.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/gfn1.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/gaff.py is executable but has no shebang, removing executable bit *** WARNING: ./usr/lib64/avogadro2/scripts/energy/ani2x.py is executable but has no shebang, removing executable bit + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/lib64/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Processing files: avogadro2-libs-1.98.1-1.fc40.ppc64le Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.4qayAn + umask 022 + cd /builddir/build/BUILD + cd avogadrolibs-1.98.1 + DOCDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/README.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi/README-libgwavi.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/README-avogenerators.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.YikyU7 + umask 022 + cd /builddir/build/BUILD + cd avogadrolibs-1.98.1 + LICENSEDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/LICENSE /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/molecules/LICENSE-molecules /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/lib64/avogadro2/scripts/scripts -> /usr/lib64/python3.12/site-packages/avogadro2/scripts Provides: avogadro2-libs = 1.98.1-1.fc40 avogadro2-libs(ppc-64) = 1.98.1-1.fc40 avogadro2-libs-static = 0:1.98.1-1.fc40 libAvogadroCalc.so.1()(64bit) libAvogadroCore.so.1()(64bit) libAvogadroIO.so.1()(64bit) libAvogadroMoleQueue.so.1()(64bit) libAvogadroQtGui.so.1()(64bit) libAvogadroQtOpenGL.so.1()(64bit) libAvogadroQtPlugins.so.1()(64bit) libAvogadroQuantumIO.so.1()(64bit) libAvogadroRendering.so.1()(64bit) python-avogadro2-libs = 1.98.1-1.fc40 python3.12-avogadro2-libs = 1.98.1-1.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: ld64.so.2()(64bit) ld64.so.2(GLIBC_2.22)(64bit) ld64.so.2(GLIBC_2.23)(64bit) libAvogadroCalc.so.1()(64bit) libAvogadroCore.so.1()(64bit) libAvogadroIO.so.1()(64bit) libAvogadroMoleQueue.so.1()(64bit) libAvogadroQtGui.so.1()(64bit) libAvogadroQtOpenGL.so.1()(64bit) libAvogadroQuantumIO.so.1()(64bit) libAvogadroRendering.so.1()(64bit) libGLEW.so.2.2()(64bit) libGLX.so.0()(64bit) libOpenGL.so.0()(64bit) libQt5Concurrent.so.5()(64bit) libQt5Concurrent.so.5(Qt_5)(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libarchive.so.13()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.17)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libhdf5.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.17)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsymspg.so.1()(64bit) python(abi) = 3.12 rtld(GNU_HASH) Obsoletes: python-avogadro2-libs < 1.98.1-1.fc40 Processing files: avogadro2-libs-devel-1.98.1-1.fc40.ppc64le Provides: avogadro2-libs-devel = 1.98.1-1.fc40 avogadro2-libs-devel(ppc-64) = 1.98.1-1.fc40 cmake(AvogadroLibs) = 1.98.1 cmake(avogadrolibs) = 1.98.1 libgwavi-static Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: cmake-filesystem(ppc-64) libAvogadroCalc.so.1()(64bit) libAvogadroCore.so.1()(64bit) libAvogadroIO.so.1()(64bit) libAvogadroMoleQueue.so.1()(64bit) libAvogadroQtGui.so.1()(64bit) libAvogadroQtOpenGL.so.1()(64bit) libAvogadroQtPlugins.so.1()(64bit) libAvogadroQuantumIO.so.1()(64bit) libAvogadroRendering.so.1()(64bit) Processing files: avogadro2-libs-doc-1.98.1-1.fc40.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.9IAsMP + umask 022 + cd /builddir/build/BUILD + cd avogadrolibs-1.98.1 + DOCDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs-doc + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs-doc + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/README.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs-doc + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/build/docs/html /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/doc/avogadro2-libs-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.VIIp5Q + umask 022 + cd /builddir/build/BUILD + cd avogadrolibs-1.98.1 + LICENSEDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs-doc + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs-doc + cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/LICENSE /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le/usr/share/licenses/avogadro2-libs-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: avogadro2-libs-doc = 1.98.1-1.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: avogadro2-libs-debugsource-1.98.1-1.fc40.ppc64le Provides: avogadro2-libs-debugsource = 1.98.1-1.fc40 avogadro2-libs-debugsource(ppc-64) = 1.98.1-1.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: avogadro2-libs-debuginfo-1.98.1-1.fc40.ppc64le Provides: avogadro2-libs-debuginfo = 1.98.1-1.fc40 avogadro2-libs-debuginfo(ppc-64) = 1.98.1-1.fc40 debuginfo(build-id) = 1b2c41084e7b92ddab9d15cc51b576be5aa496d4 debuginfo(build-id) = 5ecdc8f4c69aa652202b6c37696c4fc0b305ceba debuginfo(build-id) = 79b37a3c80ebb91595747dd9ee754f518d1226e0 debuginfo(build-id) = c786a69f769389a496def93767c8691e7a912a7c debuginfo(build-id) = cf915932182b57a924332611daa7c9753a8b112e debuginfo(build-id) = d1e1d15824c56a2d5a751afe11d6a190013d428d debuginfo(build-id) = f3e4a645cdbd509d6dcdb80d5c17534d67532db2 debuginfo(build-id) = fac7ab20c268dd573132823b81ca2730efd9332e debuginfo(build-id) = fecc4a158f4460c358a13c73d3a9804abb67f909 libAvogadroCalc.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroCore.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroIO.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroMoleQueue.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroQtGui.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroQtOpenGL.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroQtPlugins.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroQuantumIO.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) libAvogadroRendering.so.1.98.1-1.98.1-1.fc40.ppc64le.debug()(64bit) Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: avogadro2-libs-debugsource(ppc-64) = 1.98.1-1.fc40 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le Wrote: /builddir/build/RPMS/avogadro2-libs-1.98.1-1.fc40.ppc64le.rpm Wrote: /builddir/build/RPMS/avogadro2-libs-doc-1.98.1-1.fc40.noarch.rpm Wrote: /builddir/build/RPMS/avogadro2-libs-debugsource-1.98.1-1.fc40.ppc64le.rpm Wrote: /builddir/build/RPMS/avogadro2-libs-devel-1.98.1-1.fc40.ppc64le.rpm Wrote: /builddir/build/RPMS/avogadro2-libs-debuginfo-1.98.1-1.fc40.ppc64le.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.i4pOZu + umask 022 + cd /builddir/build/BUILD + cd avogadrolibs-1.98.1 + /usr/bin/rm -rf /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.ppc64le + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.WDncSz + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/avogadrolibs-1.98.1-SPECPARTS + rm -rf avogadrolibs-1.98.1 avogadrolibs-1.98.1.gemspec + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/lib64/avogadro2/scripts/scripts -> /usr/lib64/python3.12/site-packages/avogadro2/scripts Finish: rpmbuild avogadro2-libs-1.98.1-1.fc40.src.rpm Finish: build phase for avogadro2-libs-1.98.1-1.fc40.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root/var/log/dnf.rpm.log /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root/var/log/dnf.librepo.log /var/lib/mock/fedora-rawhide-ppc64le-1702405450.786193/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/avogadro2-libs-1.98.1-1.fc40.src.rpm) Config(child) 33 minutes 39 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "avogadro2-libs", "epoch": null, "version": "1.98.1", "release": "1.fc40", "arch": "src" }, { "name": "avogadro2-libs", "epoch": null, "version": "1.98.1", "release": "1.fc40", "arch": "ppc64le" }, { "name": "avogadro2-libs-debugsource", "epoch": null, "version": "1.98.1", "release": "1.fc40", "arch": "ppc64le" }, { "name": "avogadro2-libs-debuginfo", "epoch": null, "version": "1.98.1", "release": "1.fc40", "arch": "ppc64le" }, { "name": "avogadro2-libs-devel", "epoch": null, "version": "1.98.1", "release": "1.fc40", "arch": "ppc64le" }, { "name": "avogadro2-libs-doc", "epoch": null, "version": "1.98.1", "release": "1.fc40", "arch": "noarch" } ] } RPMResults finished