Warning: Permanently added '2620:52:3:1:dead:beef:cafe:c10d' (ED25519) to the list of known hosts.

You can reproduce this build on your computer by running:

  sudo dnf install copr-rpmbuild
  /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6726968-fedora-rawhide-x86_64 --chroot fedora-rawhide-x86_64


Version: 0.70
PID: 6644
Logging PID: 6645
Task:
{'appstream': False,
 'background': True,
 'build_id': 6726968,
 'buildroot_pkgs': [],
 'chroot': 'fedora-rawhide-x86_64',
 'enable_net': False,
 'fedora_review': False,
 'git_hash': 'fb184d8f151101d992bd923f87066703f17c0bde',
 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/ppalka/boost-1.83/avogadro2-libs',
 'isolation': 'default',
 'memory_reqs': 2048,
 'package_name': 'avogadro2-libs',
 'package_version': '1.98.1-1',
 'project_dirname': 'boost-1.83',
 'project_name': 'boost-1.83',
 'project_owner': 'ppalka',
 'repo_priority': None,
 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/ppalka/boost-1.83/fedora-rawhide-x86_64/',
            'id': 'copr_base',
            'name': 'Copr repository',
            'priority': None}],
 'sandbox': 'ppalka/boost-1.83--ppalka',
 'source_json': {},
 'source_type': None,
 'submitter': 'ppalka',
 'tags': [],
 'task_id': '6726968-fedora-rawhide-x86_64',
 'timeout': 115200,
 'uses_devel_repo': False,
 'with_opts': [],
 'without_opts': []}

Running: git clone https://copr-dist-git.fedorainfracloud.org/git/ppalka/boost-1.83/avogadro2-libs /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs --depth 500 --no-single-branch --recursive

cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/ppalka/boost-1.83/avogadro2-libs', '/var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs', '--depth', '500', '--no-single-branch', '--recursive']
cwd: .
rc: 0
stdout: 
stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs'...

Running: git checkout fb184d8f151101d992bd923f87066703f17c0bde --

cmd: ['git', 'checkout', 'fb184d8f151101d992bd923f87066703f17c0bde', '--']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs
rc: 0
stdout: 
stderr: Note: switching to 'fb184d8f151101d992bd923f87066703f17c0bde'.

You are in 'detached HEAD' state. You can look around, make experimental
changes and commit them, and you can discard any commits you make in this
state without impacting any branches by switching back to a branch.

If you want to create a new branch to retain commits you create, you may
do so (now or later) by using -c with the switch command. Example:

  git switch -c <new-branch-name>

Or undo this operation with:

  git switch -

Turn off this advice by setting config variable advice.detachedHead to false

HEAD is now at fb184d8 automatic import of avogadro2-libs

Running: copr-distgit-client sources
/usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated

cmd: ['copr-distgit-client', 'sources']
cwd: /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs
rc: 0
stdout: 
stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD
INFO: Reading stdout from command: git rev-parse HEAD
INFO: Reading sources specification file: sources
INFO: Downloading avogadrolibs-1.98.1.tar.gz
INFO: Reading stdout from command: curl --help all
INFO: Calling: curl -H Pragma: -o avogadrolibs-1.98.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83/avogadro2-libs/avogadrolibs-1.98.1.tar.gz/md5/6e8d34caae91cbd1031a194893066cae/avogadrolibs-1.98.1.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 4494k  100 4494k    0     0  4036k      0  0:00:01  0:00:01 --:--:-- 4038k
INFO: Reading stdout from command: md5sum avogadrolibs-1.98.1.tar.gz
INFO: Downloading avogenerators-1.98.0.tar.gz
INFO: Calling: curl -H Pragma: -o avogenerators-1.98.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83/avogadro2-libs/avogenerators-1.98.0.tar.gz/md5/74b508114f30f469256a19ebc4996f87/avogenerators-1.98.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 15676  100 15676    0     0   252k      0 --:--:-- --:--:-- --:--:--  255k
INFO: Reading stdout from command: md5sum avogenerators-1.98.0.tar.gz
INFO: Downloading crystals-1.98.0.tar.gz
INFO: Calling: curl -H Pragma: -o crystals-1.98.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83/avogadro2-libs/crystals-1.98.0.tar.gz/md5/07733a52b8a6572adb353abb6044d6f6/crystals-1.98.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 53.3M  100 53.3M    0     0  3459k      0  0:00:15  0:00:15 --:--:-- 3034k
INFO: Reading stdout from command: md5sum crystals-1.98.0.tar.gz
INFO: Downloading molecules-1.98.0.tar.gz
INFO: Calling: curl -H Pragma: -o molecules-1.98.0.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/ppalka/boost-1.83/avogadro2-libs/molecules-1.98.0.tar.gz/md5/789264f5a03f37bf336d2904abe9cd3d/molecules-1.98.0.tar.gz
  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed
100 9720k  100 9720k    0     0  31.5M      0 --:--:-- --:--:-- --:--:-- 31.6M
INFO: Reading stdout from command: md5sum molecules-1.98.0.tar.gz

Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs/avogadro2-libs.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1701804424.642033 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
INFO: mock.py version 5.2 starting (python version = 3.11.3, NVR = mock-5.2-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs/avogadro2-libs.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1701804424.642033 -r /var/lib/copr-rpmbuild/results/configs/child.cfg
Start(bootstrap): init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish(bootstrap): init plugins
Start: init plugins
INFO: tmpfs initialized
INFO: selinux enabled
INFO: chroot_scan: initialized
INFO: compress_logs: initialized
Finish: init plugins
INFO: Signal handler active
Start: run
INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs/avogadro2-libs.spec)  Config(fedora-rawhide-x86_64)
Start: clean chroot
Finish: clean chroot
Mock Version: 5.2
INFO: Mock Version: 5.2
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1701804424.642033/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
INFO: Guessed host environment type: unknown
INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide
INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide
INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1701804424.642033/root
INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture
INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount
INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/6b84d969583eab0c41f489d3b55e82f78ada08ef1320e9fb113e0d98a3d2c934/merged
INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/6b84d969583eab0c41f489d3b55e82f78ada08ef1320e9fb113e0d98a3d2c934/merged) with podman image umount
INFO: Package manager dnf detected and used (fallback)
INFO: Bootstrap image not marked ready
Start(bootstrap): installing dnf tooling
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  13 MB/s | 9.2 MB     00:00    
fedora                                           13 MB/s |  72 MB     00:05    
Last metadata expiration check: 0:00:02 ago on Tue Dec  5 19:27:15 2023.
Package python3-dnf-4.18.1-2.fc40.noarch is already installed.
Dependencies resolved.
================================================================================
 Package                      Arch       Version               Repository  Size
================================================================================
Installing:
 python3-dnf-plugins-core     noarch     4.4.3-1.fc40          fedora     317 k
Installing dependencies:
 dbus-libs                    x86_64     1:1.14.10-1.fc40      fedora     155 k
 python3-dateutil             noarch     1:2.8.2-11.fc40       fedora     356 k
 python3-dbus                 x86_64     1.3.2-4.fc39          fedora     157 k
 python3-distro               noarch     1.8.0-6.fc39          fedora      49 k
 python3-six                  noarch     1.16.0-12.fc39        fedora      41 k
 python3-systemd              x86_64     235-5.fc39            fedora     107 k

Transaction Summary
================================================================================
Install  7 Packages

Total download size: 1.2 M
Installed size: 3.6 M
Downloading Packages:
(1/7): dbus-libs-1.14.10-1.fc40.x86_64.rpm      1.1 MB/s | 155 kB     00:00    
(2/7): python3-dbus-1.3.2-4.fc39.x86_64.rpm     1.0 MB/s | 157 kB     00:00    
(3/7): python3-distro-1.8.0-6.fc39.noarch.rpm   1.5 MB/s |  49 kB     00:00    
(4/7): python3-dnf-plugins-core-4.4.3-1.fc40.no 4.3 MB/s | 317 kB     00:00    
(5/7): python3-six-1.16.0-12.fc39.noarch.rpm    719 kB/s |  41 kB     00:00    
(6/7): python3-dateutil-2.8.2-11.fc40.noarch.rp 1.5 MB/s | 356 kB     00:00    
(7/7): python3-systemd-235-5.fc39.x86_64.rpm    3.6 MB/s | 107 kB     00:00    
--------------------------------------------------------------------------------
Total                                           4.1 MB/s | 1.2 MB     00:00     
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Preparing        :                                                        1/1 
  Installing       : python3-systemd-235-5.fc39.x86_64                      1/7 
  Installing       : python3-six-1.16.0-12.fc39.noarch                      2/7 
  Installing       : python3-dateutil-1:2.8.2-11.fc40.noarch                3/7 
  Installing       : python3-distro-1.8.0-6.fc39.noarch                     4/7 
  Installing       : dbus-libs-1:1.14.10-1.fc40.x86_64                      5/7 
  Installing       : python3-dbus-1.3.2-4.fc39.x86_64                       6/7 
  Installing       : python3-dnf-plugins-core-4.4.3-1.fc40.noarch           7/7 
  Running scriptlet: python3-dnf-plugins-core-4.4.3-1.fc40.noarch           7/7 

Installed:
  dbus-libs-1:1.14.10-1.fc40.x86_64                                             
  python3-dateutil-1:2.8.2-11.fc40.noarch                                       
  python3-dbus-1.3.2-4.fc39.x86_64                                              
  python3-distro-1.8.0-6.fc39.noarch                                            
  python3-dnf-plugins-core-4.4.3-1.fc40.noarch                                  
  python3-six-1.16.0-12.fc39.noarch                                             
  python3-systemd-235-5.fc39.x86_64                                             

Complete!
Finish(bootstrap): installing dnf tooling
Start(bootstrap): creating root cache
Finish(bootstrap): creating root cache
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
INFO: Package manager dnf detected and used (direct choice)
Start: installing minimal buildroot with dnf
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  40 MB/s | 9.2 MB     00:00    
fedora                                           13 MB/s |  72 MB     00:05    
Last metadata expiration check: 0:00:02 ago on Tue Dec  5 19:27:49 2023.
Dependencies resolved.
================================================================================
 Package                      Arch   Version                    Repo       Size
================================================================================
Installing group/module packages:
 bash                         x86_64 5.2.21-2.fc40              fedora    1.8 M
 bzip2                        x86_64 1.0.8-16.fc39              fedora     52 k
 coreutils                    x86_64 9.4-1.fc40                 fedora    1.1 M
 cpio                         x86_64 2.14-5.fc40                fedora    280 k
 diffutils                    x86_64 3.10-3.fc39                fedora    398 k
 fedora-release-common        noarch 40-0.20                    fedora     20 k
 findutils                    x86_64 1:4.9.0-6.fc40             fedora    492 k
 gawk                         x86_64 5.2.2-2.fc39               fedora    1.1 M
 glibc-minimal-langpack       x86_64 2.38.9000-26.fc40          fedora     85 k
 grep                         x86_64 3.11-5.fc40                fedora    298 k
 gzip                         x86_64 1.12-6.fc39                fedora    166 k
 info                         x86_64 7.1-1.fc40                 fedora    184 k
 patch                        x86_64 2.7.6-22.fc39              fedora    125 k
 redhat-rpm-config            noarch 271-1.fc40                 fedora     81 k
 rpm-build                    x86_64 4.19.0-3.fc40              fedora     79 k
 sed                          x86_64 4.8-14.fc39                fedora    306 k
 shadow-utils                 x86_64 2:4.14.0-2.fc40            fedora    1.3 M
 tar                          x86_64 2:1.35-2.fc40              fedora    864 k
 unzip                        x86_64 6.0-62.fc39                fedora    184 k
 util-linux                   x86_64 2.39.2-1.fc40              fedora    1.2 M
 which                        x86_64 2.21-40.fc39               fedora     42 k
 xz                           x86_64 5.4.5-1.fc40               fedora    557 k
Installing dependencies:
 alternatives                 x86_64 1.25-1.fc39                fedora     39 k
 ansible-srpm-macros          noarch 1-11.fc39                  fedora     21 k
 audit-libs                   x86_64 3.1.2-5.fc40               fedora    117 k
 authselect                   x86_64 1.4.3-1.fc40               fedora    149 k
 authselect-libs              x86_64 1.4.3-1.fc40               fedora    249 k
 basesystem                   noarch 11-18.fc39                 fedora    7.2 k
 binutils                     x86_64 2.41-15.fc40               fedora    6.3 M
 binutils-gold                x86_64 2.41-15.fc40               fedora    797 k
 bzip2-libs                   x86_64 1.0.8-16.fc39              fedora     41 k
 ca-certificates              noarch 2023.2.62_v7.0.401-4.fc40  fedora    863 k
 coreutils-common             x86_64 9.4-1.fc40                 fedora    2.1 M
 cracklib                     x86_64 2.9.11-2.fc39              fedora     94 k
 crypto-policies              noarch 20231113-1.gitb402e82.fc40 fedora     99 k
 curl                         x86_64 8.4.0-1.fc40               fedora    362 k
 cyrus-sasl-lib               x86_64 2.1.28-11.fc39             fedora    793 k
 debugedit                    x86_64 5.0-11.fc40                fedora     77 k
 dwz                          x86_64 0.15-3.fc39                fedora    134 k
 ed                           x86_64 1.19-4.fc39                fedora     79 k
 efi-srpm-macros              noarch 5-9.fc39                   fedora     22 k
 elfutils                     x86_64 0.190-4.fc40               fedora    550 k
 elfutils-debuginfod-client   x86_64 0.190-4.fc40               fedora     38 k
 elfutils-default-yama-scope  noarch 0.190-4.fc40               fedora     13 k
 elfutils-libelf              x86_64 0.190-4.fc40               fedora    194 k
 elfutils-libs                x86_64 0.190-4.fc40               fedora    259 k
 fedora-gpg-keys              noarch 40-0.2                     fedora    130 k
 fedora-release               noarch 40-0.20                    fedora    9.3 k
 fedora-release-identity-basic
                              noarch 40-0.20                    fedora     10 k
 fedora-repos                 noarch 40-0.2                     fedora    9.3 k
 fedora-repos-rawhide         noarch 40-0.2                     fedora    8.9 k
 file                         x86_64 5.45-1.fc40                fedora     49 k
 file-libs                    x86_64 5.45-1.fc40                fedora    763 k
 filesystem                   x86_64 3.18-6.fc39                fedora    1.1 M
 fonts-srpm-macros            noarch 1:2.0.5-12.fc39            fedora     26 k
 forge-srpm-macros            noarch 0.1.0-1.fc40               fedora     18 k
 fpc-srpm-macros              noarch 1.3-8.fc39                 fedora    7.4 k
 gdb-minimal                  x86_64 13.2-12.fc40               copr_base 4.2 M
 gdbm                         x86_64 1:1.23-4.fc39              fedora    155 k
 gdbm-libs                    x86_64 1:1.23-4.fc39              fedora     56 k
 ghc-srpm-macros              noarch 1.6.1-3.fc40               fedora    8.1 k
 glibc                        x86_64 2.38.9000-26.fc40          fedora    2.2 M
 glibc-common                 x86_64 2.38.9000-26.fc40          fedora    367 k
 glibc-gconv-extra            x86_64 2.38.9000-26.fc40          fedora    1.7 M
 gmp                          x86_64 1:6.2.1-5.fc39             fedora    313 k
 gnat-srpm-macros             noarch 6-3.fc39                   fedora    8.8 k
 go-srpm-macros               noarch 3.3.1-1.fc40               fedora     28 k
 jansson                      x86_64 2.13.1-7.fc39              fedora     44 k
 kernel-srpm-macros           noarch 1.0-20.fc39                fedora     10 k
 keyutils-libs                x86_64 1.6.1-7.fc39               fedora     31 k
 krb5-libs                    x86_64 1.21.2-2.fc40              fedora    765 k
 libacl                       x86_64 2.3.1-11.fc40              fedora     24 k
 libarchive                   x86_64 3.7.2-1.fc40               fedora    408 k
 libattr                      x86_64 2.5.1-9.fc40               fedora     18 k
 libblkid                     x86_64 2.39.2-1.fc40              fedora    116 k
 libbrotli                    x86_64 1.1.0-1.fc40               fedora    336 k
 libcap                       x86_64 2.69-1.fc40                fedora     83 k
 libcap-ng                    x86_64 0.8.3-8.fc40               fedora     32 k
 libcom_err                   x86_64 1.47.0-2.fc39              fedora     26 k
 libcurl                      x86_64 8.4.0-1.fc40               fedora    343 k
 libeconf                     x86_64 0.5.2-1.fc40               fedora     30 k
 libevent                     x86_64 2.1.12-9.fc39              fedora    258 k
 libfdisk                     x86_64 2.39.2-1.fc40              fedora    162 k
 libffi                       x86_64 3.4.4-4.fc39               fedora     40 k
 libgcc                       x86_64 13.2.1-5.fc40              fedora    112 k
 libgomp                      x86_64 13.2.1-5.fc40              fedora    321 k
 libidn2                      x86_64 2.3.4-3.fc39               fedora    117 k
 libmount                     x86_64 2.39.2-1.fc40              fedora    154 k
 libnghttp2                   x86_64 1.58.0-1.fc40              fedora     76 k
 libnsl2                      x86_64 2.0.0-6.fc39               fedora     30 k
 libpkgconf                   x86_64 1.9.5-2.fc39               fedora     38 k
 libpsl                       x86_64 0.21.2-4.fc39              fedora     63 k
 libpwquality                 x86_64 1.4.5-6.fc39               fedora    120 k
 libselinux                   x86_64 3.6-0.rc2.1.fc40           fedora     88 k
 libsemanage                  x86_64 3.6-0.rc2.1.fc40           fedora    116 k
 libsepol                     x86_64 3.6-0.rc2.1.fc40           fedora    340 k
 libsigsegv                   x86_64 2.14-5.fc39                fedora     27 k
 libsmartcols                 x86_64 2.39.2-1.fc40              fedora     67 k
 libssh                       x86_64 0.10.5-2.fc39              fedora    211 k
 libssh-config                noarch 0.10.5-2.fc39              fedora    9.2 k
 libstdc++                    x86_64 13.2.1-5.fc40              fedora    864 k
 libtasn1                     x86_64 4.19.0-3.fc39              fedora     74 k
 libtirpc                     x86_64 1.3.4-0.fc40               fedora     94 k
 libunistring                 x86_64 1.1-5.fc40                 fedora    543 k
 libutempter                  x86_64 1.2.1-10.fc39              fedora     26 k
 libuuid                      x86_64 2.39.2-1.fc40              fedora     28 k
 libverto                     x86_64 0.3.2-6.fc39               fedora     20 k
 libxcrypt                    x86_64 4.4.36-2.fc39              fedora    119 k
 libxml2                      x86_64 2.12.1-1.fc40              fedora    699 k
 libzstd                      x86_64 1.5.5-4.fc39               fedora    309 k
 lua-libs                     x86_64 5.4.6-3.fc39               fedora    133 k
 lua-srpm-macros              noarch 1-9.fc39                   fedora    8.6 k
 lz4-libs                     x86_64 1.9.4-4.fc39               fedora     67 k
 mpfr                         x86_64 4.2.1-1.fc40               fedora    343 k
 ncurses-base                 noarch 6.4-8.20231001.fc40        fedora     88 k
 ncurses-libs                 x86_64 6.4-8.20231001.fc40        fedora    338 k
 ocaml-srpm-macros            noarch 9-1.fc40                   fedora    9.0 k
 openblas-srpm-macros         noarch 2-14.fc39                  fedora    7.5 k
 openldap                     x86_64 2.6.6-1.fc39               fedora    255 k
 openssl-libs                 x86_64 1:3.1.4-1.fc40             fedora    2.2 M
 p11-kit                      x86_64 0.25.3-1.fc40              fedora    522 k
 p11-kit-trust                x86_64 0.25.3-1.fc40              fedora    142 k
 package-notes-srpm-macros    noarch 0.5-9.fc39                 fedora     11 k
 pam                          x86_64 1.5.3-8.fc40               fedora    547 k
 pam-libs                     x86_64 1.5.3-8.fc40               fedora     57 k
 pcre2                        x86_64 10.42-2.fc40               fedora    233 k
 pcre2-syntax                 noarch 10.42-2.fc40               fedora    143 k
 perl-srpm-macros             noarch 1-51.fc39                  fedora    8.0 k
 pkgconf                      x86_64 1.9.5-2.fc39               fedora     42 k
 pkgconf-m4                   noarch 1.9.5-2.fc39               fedora     14 k
 pkgconf-pkg-config           x86_64 1.9.5-2.fc39               fedora    9.6 k
 popt                         x86_64 1.19-3.fc39                fedora     66 k
 publicsuffix-list-dafsa      noarch 20230812-1.fc40            fedora     57 k
 pyproject-srpm-macros        noarch 1.10.0-1.fc40              fedora     14 k
 python-srpm-macros           noarch 3.12-4.fc40                fedora     25 k
 qt5-srpm-macros              noarch 5.15.11-1.fc40             fedora    8.3 k
 qt6-srpm-macros              noarch 6.6.1-1.fc40               fedora    8.6 k
 readline                     x86_64 8.2-4.fc39                 fedora    213 k
 rpm                          x86_64 4.19.0-3.fc40              fedora    537 k
 rpm-build-libs               x86_64 4.19.0-3.fc40              fedora     96 k
 rpm-libs                     x86_64 4.19.0-3.fc40              fedora    313 k
 rpm-sequoia                  x86_64 1.5.0-2.fc40               fedora    879 k
 rust-srpm-macros             noarch 25.2-2.fc40                fedora     13 k
 setup                        noarch 2.14.5-1.fc40              fedora    155 k
 sqlite-libs                  x86_64 3.44.1-1.fc40              fedora    693 k
 systemd-libs                 x86_64 255~rc4-3.fc40             fedora    702 k
 util-linux-core              x86_64 2.39.2-1.fc40              fedora    493 k
 xxhash-libs                  x86_64 0.8.2-1.fc39               fedora     37 k
 xz-libs                      x86_64 5.4.5-1.fc40               fedora    108 k
 zip                          x86_64 3.0-39.fc40                fedora    266 k
 zlib                         x86_64 1.2.13-5.fc40              fedora     94 k
 zstd                         x86_64 1.5.5-4.fc39               fedora    482 k
Installing Groups:
 Buildsystem building group                                                    

Transaction Summary
================================================================================
Install  152 Packages

Total download size: 52 M
Installed size: 180 M
Downloading Packages:
(1/152): gdb-minimal-13.2-12.fc40.x86_64.rpm     29 MB/s | 4.2 MB     00:00    
(2/152): ansible-srpm-macros-1-11.fc39.noarch.r  63 kB/s |  21 kB     00:00    
(3/152): alternatives-1.25-1.fc39.x86_64.rpm    107 kB/s |  39 kB     00:00    
(4/152): audit-libs-3.1.2-5.fc40.x86_64.rpm     226 kB/s | 117 kB     00:00    
(5/152): authselect-1.4.3-1.fc40.x86_64.rpm     412 kB/s | 149 kB     00:00    
(6/152): authselect-libs-1.4.3-1.fc40.x86_64.rp 638 kB/s | 249 kB     00:00    
(7/152): basesystem-11-18.fc39.noarch.rpm        71 kB/s | 7.2 kB     00:00    
(8/152): bash-5.2.21-2.fc40.x86_64.rpm          3.5 MB/s | 1.8 MB     00:00    
(9/152): binutils-gold-2.41-15.fc40.x86_64.rpm  1.8 MB/s | 797 kB     00:00    
(10/152): bzip2-1.0.8-16.fc39.x86_64.rpm        429 kB/s |  52 kB     00:00    
(11/152): bzip2-libs-1.0.8-16.fc39.x86_64.rpm   336 kB/s |  41 kB     00:00    
(12/152): ca-certificates-2023.2.62_v7.0.401-4. 5.9 MB/s | 863 kB     00:00    
(13/152): coreutils-9.4-1.fc40.x86_64.rpm       4.8 MB/s | 1.1 MB     00:00    
(14/152): binutils-2.41-15.fc40.x86_64.rpm      7.5 MB/s | 6.3 MB     00:00    
(15/152): coreutils-common-9.4-1.fc40.x86_64.rp  11 MB/s | 2.1 MB     00:00    
(16/152): cpio-2.14-5.fc40.x86_64.rpm           2.4 MB/s | 280 kB     00:00    
(17/152): cracklib-2.9.11-2.fc39.x86_64.rpm     888 kB/s |  94 kB     00:00    
(18/152): crypto-policies-20231113-1.gitb402e82 1.1 MB/s |  99 kB     00:00    
(19/152): curl-8.4.0-1.fc40.x86_64.rpm          3.1 MB/s | 362 kB     00:00    
(20/152): cyrus-sasl-lib-2.1.28-11.fc39.x86_64. 6.4 MB/s | 793 kB     00:00    
(21/152): debugedit-5.0-11.fc40.x86_64.rpm      778 kB/s |  77 kB     00:00    
(22/152): diffutils-3.10-3.fc39.x86_64.rpm      3.3 MB/s | 398 kB     00:00    
(23/152): dwz-0.15-3.fc39.x86_64.rpm            1.3 MB/s | 134 kB     00:00    
(24/152): ed-1.19-4.fc39.x86_64.rpm             754 kB/s |  79 kB     00:00    
(25/152): efi-srpm-macros-5-9.fc39.noarch.rpm   222 kB/s |  22 kB     00:00    
(26/152): elfutils-0.190-4.fc40.x86_64.rpm      5.1 MB/s | 550 kB     00:00    
(27/152): elfutils-debuginfod-client-0.190-4.fc 363 kB/s |  38 kB     00:00    
(28/152): elfutils-default-yama-scope-0.190-4.f 140 kB/s |  13 kB     00:00    
(29/152): elfutils-libelf-0.190-4.fc40.x86_64.r 2.0 MB/s | 194 kB     00:00    
(30/152): elfutils-libs-0.190-4.fc40.x86_64.rpm 2.4 MB/s | 259 kB     00:00    
(31/152): fedora-gpg-keys-40-0.2.noarch.rpm     1.3 MB/s | 130 kB     00:00    
(32/152): fedora-release-40-0.20.noarch.rpm      88 kB/s | 9.3 kB     00:00    
(33/152): fedora-release-common-40-0.20.noarch. 166 kB/s |  20 kB     00:00    
(34/152): fedora-release-identity-basic-40-0.20 105 kB/s |  10 kB     00:00    
(35/152): fedora-repos-40-0.2.noarch.rpm        101 kB/s | 9.3 kB     00:00    
(36/152): fedora-repos-rawhide-40-0.2.noarch.rp  96 kB/s | 8.9 kB     00:00    
(37/152): file-5.45-1.fc40.x86_64.rpm           531 kB/s |  49 kB     00:00    
(38/152): file-libs-5.45-1.fc40.x86_64.rpm      6.1 MB/s | 763 kB     00:00    
(39/152): findutils-4.9.0-6.fc40.x86_64.rpm     3.6 MB/s | 492 kB     00:00    
(40/152): filesystem-3.18-6.fc39.x86_64.rpm     7.8 MB/s | 1.1 MB     00:00    
(41/152): fonts-srpm-macros-2.0.5-12.fc39.noarc 250 kB/s |  26 kB     00:00    
(42/152): fpc-srpm-macros-1.3-8.fc39.noarch.rpm  64 kB/s | 7.4 kB     00:00    
(43/152): forge-srpm-macros-0.1.0-1.fc40.noarch 144 kB/s |  18 kB     00:00    
(44/152): gawk-5.2.2-2.fc39.x86_64.rpm          7.7 MB/s | 1.1 MB     00:00    
(45/152): gdbm-1.23-4.fc39.x86_64.rpm           1.3 MB/s | 155 kB     00:00    
(46/152): gdbm-libs-1.23-4.fc39.x86_64.rpm      526 kB/s |  56 kB     00:00    
(47/152): ghc-srpm-macros-1.6.1-3.fc40.noarch.r  79 kB/s | 8.1 kB     00:00    
(48/152): glibc-common-2.38.9000-26.fc40.x86_64 1.5 MB/s | 367 kB     00:00    
(49/152): glibc-2.38.9000-26.fc40.x86_64.rpm    6.7 MB/s | 2.2 MB     00:00    
(50/152): glibc-minimal-langpack-2.38.9000-26.f 849 kB/s |  85 kB     00:00    
(51/152): glibc-gconv-extra-2.38.9000-26.fc40.x 5.5 MB/s | 1.7 MB     00:00    
(52/152): gmp-6.2.1-5.fc39.x86_64.rpm           2.7 MB/s | 313 kB     00:00    
(53/152): gnat-srpm-macros-6-3.fc39.noarch.rpm   88 kB/s | 8.8 kB     00:00    
(54/152): go-srpm-macros-3.3.1-1.fc40.noarch.rp 252 kB/s |  28 kB     00:00    
(55/152): grep-3.11-5.fc40.x86_64.rpm           2.7 MB/s | 298 kB     00:00    
(56/152): gzip-1.12-6.fc39.x86_64.rpm           1.4 MB/s | 166 kB     00:00    
(57/152): info-7.1-1.fc40.x86_64.rpm            1.4 MB/s | 184 kB     00:00    
(58/152): jansson-2.13.1-7.fc39.x86_64.rpm      398 kB/s |  44 kB     00:00    
(59/152): kernel-srpm-macros-1.0-20.fc39.noarch  93 kB/s |  10 kB     00:00    
(60/152): keyutils-libs-1.6.1-7.fc39.x86_64.rpm 304 kB/s |  31 kB     00:00    
(61/152): libacl-2.3.1-11.fc40.x86_64.rpm       194 kB/s |  24 kB     00:00    
(62/152): libarchive-3.7.2-1.fc40.x86_64.rpm    2.8 MB/s | 408 kB     00:00    
(63/152): libattr-2.5.1-9.fc40.x86_64.rpm       179 kB/s |  18 kB     00:00    
(64/152): libblkid-2.39.2-1.fc40.x86_64.rpm     1.2 MB/s | 116 kB     00:00    
(65/152): krb5-libs-1.21.2-2.fc40.x86_64.rpm    2.5 MB/s | 765 kB     00:00    
(66/152): libbrotli-1.1.0-1.fc40.x86_64.rpm     3.1 MB/s | 336 kB     00:00    
(67/152): libcap-2.69-1.fc40.x86_64.rpm         877 kB/s |  83 kB     00:00    
(68/152): libcap-ng-0.8.3-8.fc40.x86_64.rpm     359 kB/s |  32 kB     00:00    
(69/152): libcom_err-1.47.0-2.fc39.x86_64.rpm   274 kB/s |  26 kB     00:00    
(70/152): libcurl-8.4.0-1.fc40.x86_64.rpm       2.6 MB/s | 343 kB     00:00    
(71/152): libeconf-0.5.2-1.fc40.x86_64.rpm      285 kB/s |  30 kB     00:00    
(72/152): libevent-2.1.12-9.fc39.x86_64.rpm     2.3 MB/s | 258 kB     00:00    
(73/152): libffi-3.4.4-4.fc39.x86_64.rpm        380 kB/s |  40 kB     00:00    
(74/152): libfdisk-2.39.2-1.fc40.x86_64.rpm     1.3 MB/s | 162 kB     00:00    
(75/152): libgcc-13.2.1-5.fc40.x86_64.rpm       918 kB/s | 112 kB     00:00    
(76/152): libgomp-13.2.1-5.fc40.x86_64.rpm      2.8 MB/s | 321 kB     00:00    
(77/152): libidn2-2.3.4-3.fc39.x86_64.rpm       968 kB/s | 117 kB     00:00    
(78/152): libmount-2.39.2-1.fc40.x86_64.rpm     1.4 MB/s | 154 kB     00:00    
(79/152): libnghttp2-1.58.0-1.fc40.x86_64.rpm   697 kB/s |  76 kB     00:00    
(80/152): libnsl2-2.0.0-6.fc39.x86_64.rpm       280 kB/s |  30 kB     00:00    
(81/152): libpkgconf-1.9.5-2.fc39.x86_64.rpm    372 kB/s |  38 kB     00:00    
(82/152): libpsl-0.21.2-4.fc39.x86_64.rpm       599 kB/s |  63 kB     00:00    
(83/152): libpwquality-1.4.5-6.fc39.x86_64.rpm  835 kB/s | 120 kB     00:00    
(84/152): libsemanage-3.6-0.rc2.1.fc40.x86_64.r 905 kB/s | 116 kB     00:00    
(85/152): libsepol-3.6-0.rc2.1.fc40.x86_64.rpm  2.6 MB/s | 340 kB     00:00    
(86/152): libsigsegv-2.14-5.fc39.x86_64.rpm     250 kB/s |  27 kB     00:00    
(87/152): libsmartcols-2.39.2-1.fc40.x86_64.rpm 720 kB/s |  67 kB     00:00    
(88/152): libselinux-3.6-0.rc2.1.fc40.x86_64.rp 267 kB/s |  88 kB     00:00    
(89/152): libssh-0.10.5-2.fc39.x86_64.rpm       1.9 MB/s | 211 kB     00:00    
(90/152): libssh-config-0.10.5-2.fc39.noarch.rp  97 kB/s | 9.2 kB     00:00    
(91/152): libtasn1-4.19.0-3.fc39.x86_64.rpm     684 kB/s |  74 kB     00:00    
(92/152): libstdc++-13.2.1-5.fc40.x86_64.rpm    1.9 MB/s | 864 kB     00:00    
(93/152): libunistring-1.1-5.fc40.x86_64.rpm    2.1 MB/s | 543 kB     00:00    
(94/152): libutempter-1.2.1-10.fc39.x86_64.rpm  243 kB/s |  26 kB     00:00    
(95/152): libtirpc-1.3.4-0.fc40.x86_64.rpm      187 kB/s |  94 kB     00:00    
(96/152): libverto-0.3.2-6.fc39.x86_64.rpm      200 kB/s |  20 kB     00:00    
(97/152): libuuid-2.39.2-1.fc40.x86_64.rpm       93 kB/s |  28 kB     00:00    
(98/152): libxml2-2.12.1-1.fc40.x86_64.rpm      1.7 MB/s | 699 kB     00:00    
(99/152): lua-libs-5.4.6-3.fc39.x86_64.rpm      791 kB/s | 133 kB     00:00    
(100/152): lua-srpm-macros-1-9.fc39.noarch.rpm   75 kB/s | 8.6 kB     00:00    
(101/152): lz4-libs-1.9.4-4.fc39.x86_64.rpm     619 kB/s |  67 kB     00:00    
(102/152): mpfr-4.2.1-1.fc40.x86_64.rpm         1.7 MB/s | 343 kB     00:00    
(103/152): ncurses-base-6.4-8.20231001.fc40.noa 669 kB/s |  88 kB     00:00    
(104/152): ncurses-libs-6.4-8.20231001.fc40.x86 1.1 MB/s | 338 kB     00:00    
(105/152): ocaml-srpm-macros-9-1.fc40.noarch.rp 111 kB/s | 9.0 kB     00:00    
(106/152): openblas-srpm-macros-2-14.fc39.noarc  93 kB/s | 7.5 kB     00:00    
(107/152): openldap-2.6.6-1.fc39.x86_64.rpm     1.1 MB/s | 255 kB     00:00    
(108/152): libzstd-1.5.5-4.fc39.x86_64.rpm      175 kB/s | 309 kB     00:01    
(109/152): openssl-libs-3.1.4-1.fc40.x86_64.rpm 2.7 MB/s | 2.2 MB     00:00    
(110/152): p11-kit-trust-0.25.3-1.fc40.x86_64.r 991 kB/s | 142 kB     00:00    
(111/152): libxcrypt-4.4.36-2.fc39.x86_64.rpm    42 kB/s | 119 kB     00:02    
(112/152): package-notes-srpm-macros-0.5-9.fc39 118 kB/s |  11 kB     00:00    
(113/152): pam-libs-1.5.3-8.fc40.x86_64.rpm     478 kB/s |  57 kB     00:00    
(114/152): patch-2.7.6-22.fc39.x86_64.rpm       941 kB/s | 125 kB     00:00    
(115/152): pcre2-10.42-2.fc40.x86_64.rpm        1.2 MB/s | 233 kB     00:00    
(116/152): pcre2-syntax-10.42-2.fc40.noarch.rpm 928 kB/s | 143 kB     00:00    
(117/152): p11-kit-0.25.3-1.fc40.x86_64.rpm     315 kB/s | 522 kB     00:01    
(118/152): perl-srpm-macros-1-51.fc39.noarch.rp  67 kB/s | 8.0 kB     00:00    
(119/152): pkgconf-m4-1.9.5-2.fc39.noarch.rpm   128 kB/s |  14 kB     00:00    
(120/152): pkgconf-1.9.5-2.fc39.x86_64.rpm      213 kB/s |  42 kB     00:00    
(121/152): pam-1.5.3-8.fc40.x86_64.rpm          585 kB/s | 547 kB     00:00    
(122/152): pkgconf-pkg-config-1.9.5-2.fc39.x86_ 101 kB/s | 9.6 kB     00:00    
(123/152): publicsuffix-list-dafsa-20230812-1.f 510 kB/s |  57 kB     00:00    
(124/152): pyproject-srpm-macros-1.10.0-1.fc40. 137 kB/s |  14 kB     00:00    
(125/152): python-srpm-macros-3.12-4.fc40.noarc 242 kB/s |  25 kB     00:00    
(126/152): qt5-srpm-macros-5.15.11-1.fc40.noarc  75 kB/s | 8.3 kB     00:00    
(127/152): popt-1.19-3.fc39.x86_64.rpm          207 kB/s |  66 kB     00:00    
(128/152): qt6-srpm-macros-6.6.1-1.fc40.noarch.  83 kB/s | 8.6 kB     00:00    
(129/152): readline-8.2-4.fc39.x86_64.rpm       1.3 MB/s | 213 kB     00:00    
(130/152): rpm-build-4.19.0-3.fc40.x86_64.rpm   646 kB/s |  79 kB     00:00    
(131/152): rpm-4.19.0-3.fc40.x86_64.rpm         2.2 MB/s | 537 kB     00:00    
(132/152): redhat-rpm-config-271-1.fc40.noarch. 311 kB/s |  81 kB     00:00    
(133/152): rpm-libs-4.19.0-3.fc40.x86_64.rpm    2.6 MB/s | 313 kB     00:00    
(134/152): rpm-build-libs-4.19.0-3.fc40.x86_64. 779 kB/s |  96 kB     00:00    
(135/152): rust-srpm-macros-25.2-2.fc40.noarch. 122 kB/s |  13 kB     00:00    
(136/152): setup-2.14.5-1.fc40.noarch.rpm       1.2 MB/s | 155 kB     00:00    
(137/152): sed-4.8-14.fc39.x86_64.rpm           1.0 MB/s | 306 kB     00:00    
(138/152): shadow-utils-4.14.0-2.fc40.x86_64.rp 3.9 MB/s | 1.3 MB     00:00    
(139/152): systemd-libs-255~rc4-3.fc40.x86_64.r 3.0 MB/s | 702 kB     00:00    
(140/152): tar-1.35-2.fc40.x86_64.rpm           3.3 MB/s | 864 kB     00:00    
(141/152): unzip-6.0-62.fc39.x86_64.rpm         730 kB/s | 184 kB     00:00    
(142/152): util-linux-2.39.2-1.fc40.x86_64.rpm  3.7 MB/s | 1.2 MB     00:00    
(143/152): rpm-sequoia-1.5.0-2.fc40.x86_64.rpm  455 kB/s | 879 kB     00:01    
(144/152): util-linux-core-2.39.2-1.fc40.x86_64 2.0 MB/s | 493 kB     00:00    
(145/152): sqlite-libs-3.44.1-1.fc40.x86_64.rpm 442 kB/s | 693 kB     00:01    
(146/152): xxhash-libs-0.8.2-1.fc39.x86_64.rpm  185 kB/s |  37 kB     00:00    
(147/152): which-2.21-40.fc39.x86_64.rpm        162 kB/s |  42 kB     00:00    
(148/152): xz-libs-5.4.5-1.fc40.x86_64.rpm      1.0 MB/s | 108 kB     00:00    
(149/152): zlib-1.2.13-5.fc40.x86_64.rpm        443 kB/s |  94 kB     00:00    
(150/152): zstd-1.5.5-4.fc39.x86_64.rpm         1.8 MB/s | 482 kB     00:00    
(151/152): zip-3.0-39.fc40.x86_64.rpm           363 kB/s | 266 kB     00:00    
(152/152): xz-5.4.5-1.fc40.x86_64.rpm           566 kB/s | 557 kB     00:00    
--------------------------------------------------------------------------------
Total                                           4.2 MB/s |  52 MB     00:12     
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0xA15B79CC:
 Userid     : "Fedora (40) <fedora-40-primary@fedoraproject.org>"
 Fingerprint: 115D F9AE F857 853E E844 5D0A 0727 707E A15B 79CC
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary
Key imported successfully
fedora                                          1.6 MB/s | 1.6 kB     00:00    
GPG key at file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-40-primary (0xA15B79CC) is already installed
fedora                                          1.6 MB/s | 1.6 kB     00:00    
Importing GPG key 0x18B8E74C:
 Userid     : "Fedora (39) <fedora-39-primary@fedoraproject.org>"
 Fingerprint: E8F2 3996 F232 1864 0CB4 4CBE 75CF 5AC4 18B8 E74C
 From       : /usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-39-primary
Key imported successfully
Running transaction check
Transaction check succeeded.
Running transaction test
Transaction test succeeded.
Running transaction
  Running scriptlet: filesystem-3.18-6.fc39.x86_64                          1/1 
  Preparing        :                                                        1/1 
  Installing       : libgcc-13.2.1-5.fc40.x86_64                          1/152 
  Running scriptlet: libgcc-13.2.1-5.fc40.x86_64                          1/152 
  Installing       : crypto-policies-20231113-1.gitb402e82.fc40.noarc     2/152 
  Running scriptlet: crypto-policies-20231113-1.gitb402e82.fc40.noarc     2/152 
  Installing       : fedora-release-identity-basic-40-0.20.noarch         3/152 
  Installing       : fedora-repos-rawhide-40-0.2.noarch                   4/152 
  Installing       : fedora-gpg-keys-40-0.2.noarch                        5/152 
  Installing       : fedora-repos-40-0.2.noarch                           6/152 
  Installing       : fedora-release-common-40-0.20.noarch                 7/152 
  Installing       : fedora-release-40-0.20.noarch                        8/152 
  Installing       : setup-2.14.5-1.fc40.noarch                           9/152 
warning: /etc/hosts created as /etc/hosts.rpmnew

  Running scriptlet: setup-2.14.5-1.fc40.noarch                           9/152 
  Installing       : filesystem-3.18-6.fc39.x86_64                       10/152 
  Installing       : basesystem-11-18.fc39.noarch                        11/152 
  Installing       : rust-srpm-macros-25.2-2.fc40.noarch                 12/152 
  Installing       : qt6-srpm-macros-6.6.1-1.fc40.noarch                 13/152 
  Installing       : qt5-srpm-macros-5.15.11-1.fc40.noarch               14/152 
  Installing       : publicsuffix-list-dafsa-20230812-1.fc40.noarch      15/152 
  Installing       : pkgconf-m4-1.9.5-2.fc39.noarch                      16/152 
  Installing       : perl-srpm-macros-1-51.fc39.noarch                   17/152 
  Installing       : pcre2-syntax-10.42-2.fc40.noarch                    18/152 
  Installing       : package-notes-srpm-macros-0.5-9.fc39.noarch         19/152 
  Installing       : openblas-srpm-macros-2-14.fc39.noarch               20/152 
  Installing       : ocaml-srpm-macros-9-1.fc40.noarch                   21/152 
  Installing       : ncurses-base-6.4-8.20231001.fc40.noarch             22/152 
  Installing       : glibc-gconv-extra-2.38.9000-26.fc40.x86_64          23/152 
  Running scriptlet: glibc-gconv-extra-2.38.9000-26.fc40.x86_64          23/152 
  Installing       : glibc-minimal-langpack-2.38.9000-26.fc40.x86_64     24/152 
  Installing       : glibc-common-2.38.9000-26.fc40.x86_64               25/152 
  Running scriptlet: glibc-2.38.9000-26.fc40.x86_64                      26/152 
  Installing       : glibc-2.38.9000-26.fc40.x86_64                      26/152 
  Running scriptlet: glibc-2.38.9000-26.fc40.x86_64                      26/152 
  Installing       : ncurses-libs-6.4-8.20231001.fc40.x86_64             27/152 
  Installing       : bash-5.2.21-2.fc40.x86_64                           28/152 
  Running scriptlet: bash-5.2.21-2.fc40.x86_64                           28/152 
  Installing       : zlib-1.2.13-5.fc40.x86_64                           29/152 
  Installing       : xz-libs-5.4.5-1.fc40.x86_64                         30/152 
  Installing       : bzip2-libs-1.0.8-16.fc39.x86_64                     31/152 
  Installing       : readline-8.2-4.fc39.x86_64                          32/152 
  Installing       : libstdc++-13.2.1-5.fc40.x86_64                      33/152 
  Installing       : libuuid-2.39.2-1.fc40.x86_64                        34/152 
  Installing       : libzstd-1.5.5-4.fc39.x86_64                         35/152 
  Installing       : elfutils-libelf-0.190-4.fc40.x86_64                 36/152 
  Installing       : popt-1.19-3.fc39.x86_64                             37/152 
  Installing       : libblkid-2.39.2-1.fc40.x86_64                       38/152 
  Installing       : gmp-1:6.2.1-5.fc39.x86_64                           39/152 
  Installing       : libattr-2.5.1-9.fc40.x86_64                         40/152 
  Installing       : libacl-2.3.1-11.fc40.x86_64                         41/152 
  Installing       : libxcrypt-4.4.36-2.fc39.x86_64                      42/152 
  Installing       : gdbm-libs-1:1.23-4.fc39.x86_64                      43/152 
  Installing       : libeconf-0.5.2-1.fc40.x86_64                        44/152 
  Installing       : lz4-libs-1.9.4-4.fc39.x86_64                        45/152 
  Installing       : mpfr-4.2.1-1.fc40.x86_64                            46/152 
  Installing       : dwz-0.15-3.fc39.x86_64                              47/152 
  Installing       : unzip-6.0-62.fc39.x86_64                            48/152 
  Installing       : file-libs-5.45-1.fc40.x86_64                        49/152 
  Installing       : file-5.45-1.fc40.x86_64                             50/152 
  Installing       : alternatives-1.25-1.fc39.x86_64                     51/152 
  Installing       : jansson-2.13.1-7.fc39.x86_64                        52/152 
  Installing       : libcap-ng-0.8.3-8.fc40.x86_64                       53/152 
  Installing       : audit-libs-3.1.2-5.fc40.x86_64                      54/152 
  Installing       : pam-libs-1.5.3-8.fc40.x86_64                        55/152 
  Installing       : libcap-2.69-1.fc40.x86_64                           56/152 
  Installing       : systemd-libs-255~rc4-3.fc40.x86_64                  57/152 
  Installing       : libcom_err-1.47.0-2.fc39.x86_64                     58/152 
  Installing       : libsepol-3.6-0.rc2.1.fc40.x86_64                    59/152 
  Installing       : libsmartcols-2.39.2-1.fc40.x86_64                   60/152 
  Installing       : libtasn1-4.19.0-3.fc39.x86_64                       61/152 
  Installing       : libunistring-1.1-5.fc40.x86_64                      62/152 
  Installing       : libidn2-2.3.4-3.fc39.x86_64                         63/152 
  Installing       : lua-libs-5.4.6-3.fc39.x86_64                        64/152 
  Installing       : pcre2-10.42-2.fc40.x86_64                           65/152 
  Installing       : libselinux-3.6-0.rc2.1.fc40.x86_64                  66/152 
  Installing       : sed-4.8-14.fc39.x86_64                              67/152 
  Installing       : grep-3.11-5.fc40.x86_64                             68/152 
  Installing       : findutils-1:4.9.0-6.fc40.x86_64                     69/152 
  Installing       : xz-5.4.5-1.fc40.x86_64                              70/152 
  Installing       : libmount-2.39.2-1.fc40.x86_64                       71/152 
  Installing       : util-linux-core-2.39.2-1.fc40.x86_64                72/152 
  Installing       : libsemanage-3.6-0.rc2.1.fc40.x86_64                 73/152 
  Installing       : shadow-utils-2:4.14.0-2.fc40.x86_64                 74/152 
  Running scriptlet: libutempter-1.2.1-10.fc39.x86_64                    75/152 
  Installing       : libutempter-1.2.1-10.fc39.x86_64                    75/152 
  Installing       : tar-2:1.35-2.fc40.x86_64                            76/152 
  Installing       : libpsl-0.21.2-4.fc39.x86_64                         77/152 
  Installing       : zip-3.0-39.fc40.x86_64                              78/152 
  Installing       : zstd-1.5.5-4.fc39.x86_64                            79/152 
  Installing       : cyrus-sasl-lib-2.1.28-11.fc39.x86_64                80/152 
  Installing       : gdbm-1:1.23-4.fc39.x86_64                           81/152 
  Installing       : libfdisk-2.39.2-1.fc40.x86_64                       82/152 
  Installing       : bzip2-1.0.8-16.fc39.x86_64                          83/152 
  Installing       : libxml2-2.12.1-1.fc40.x86_64                        84/152 
  Installing       : sqlite-libs-3.44.1-1.fc40.x86_64                    85/152 
  Installing       : ed-1.19-4.fc39.x86_64                               86/152 
  Installing       : patch-2.7.6-22.fc39.x86_64                          87/152 
  Installing       : elfutils-default-yama-scope-0.190-4.fc40.noarch     88/152 
  Running scriptlet: elfutils-default-yama-scope-0.190-4.fc40.noarch     88/152 
  Installing       : cpio-2.14-5.fc40.x86_64                             89/152 
  Installing       : diffutils-3.10-3.fc39.x86_64                        90/152 
  Installing       : keyutils-libs-1.6.1-7.fc39.x86_64                   91/152 
  Installing       : libbrotli-1.1.0-1.fc40.x86_64                       92/152 
  Installing       : libffi-3.4.4-4.fc39.x86_64                          93/152 
  Installing       : p11-kit-0.25.3-1.fc40.x86_64                        94/152 
  Installing       : p11-kit-trust-0.25.3-1.fc40.x86_64                  95/152 
  Running scriptlet: p11-kit-trust-0.25.3-1.fc40.x86_64                  95/152 
  Installing       : libgomp-13.2.1-5.fc40.x86_64                        96/152 
  Installing       : libnghttp2-1.58.0-1.fc40.x86_64                     97/152 
  Installing       : libpkgconf-1.9.5-2.fc39.x86_64                      98/152 
  Installing       : pkgconf-1.9.5-2.fc39.x86_64                         99/152 
  Installing       : pkgconf-pkg-config-1.9.5-2.fc39.x86_64             100/152 
  Installing       : libsigsegv-2.14-5.fc39.x86_64                      101/152 
  Installing       : gawk-5.2.2-2.fc39.x86_64                           102/152 
  Installing       : libverto-0.3.2-6.fc39.x86_64                       103/152 
  Installing       : xxhash-libs-0.8.2-1.fc39.x86_64                    104/152 
  Installing       : libssh-config-0.10.5-2.fc39.noarch                 105/152 
  Installing       : kernel-srpm-macros-1.0-20.fc39.noarch              106/152 
  Installing       : gnat-srpm-macros-6-3.fc39.noarch                   107/152 
  Installing       : ghc-srpm-macros-1.6.1-3.fc40.noarch                108/152 
  Installing       : fpc-srpm-macros-1.3-8.fc39.noarch                  109/152 
  Installing       : coreutils-common-9.4-1.fc40.x86_64                 110/152 
  Installing       : openssl-libs-1:3.1.4-1.fc40.x86_64                 111/152 
  Installing       : coreutils-9.4-1.fc40.x86_64                        112/152 
  Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   113/152 
  Installing       : ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   113/152 
  Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   113/152 
  Installing       : krb5-libs-1.21.2-2.fc40.x86_64                     114/152 
  Installing       : libtirpc-1.3.4-0.fc40.x86_64                       115/152 
  Running scriptlet: authselect-libs-1.4.3-1.fc40.x86_64                116/152 
  Installing       : authselect-libs-1.4.3-1.fc40.x86_64                116/152 
  Installing       : gzip-1.12-6.fc39.x86_64                            117/152 
  Installing       : cracklib-2.9.11-2.fc39.x86_64                      118/152 
  Installing       : libpwquality-1.4.5-6.fc39.x86_64                   119/152 
  Installing       : authselect-1.4.3-1.fc40.x86_64                     120/152 
  Installing       : libnsl2-2.0.0-6.fc39.x86_64                        121/152 
  Installing       : pam-1.5.3-8.fc40.x86_64                            122/152 
  Installing       : libssh-0.10.5-2.fc39.x86_64                        123/152 
  Installing       : libarchive-3.7.2-1.fc40.x86_64                     124/152 
  Installing       : libevent-2.1.12-9.fc39.x86_64                      125/152 
  Installing       : openldap-2.6.6-1.fc39.x86_64                       126/152 
  Installing       : libcurl-8.4.0-1.fc40.x86_64                        127/152 
  Installing       : elfutils-libs-0.190-4.fc40.x86_64                  128/152 
  Installing       : elfutils-debuginfod-client-0.190-4.fc40.x86_64     129/152 
  Installing       : binutils-gold-2.41-15.fc40.x86_64                  130/152 
  Running scriptlet: binutils-gold-2.41-15.fc40.x86_64                  130/152 
  Installing       : binutils-2.41-15.fc40.x86_64                       131/152 
  Running scriptlet: binutils-2.41-15.fc40.x86_64                       131/152 
  Installing       : gdb-minimal-13.2-12.fc40.x86_64                    132/152 
  Installing       : elfutils-0.190-4.fc40.x86_64                       133/152 
  Installing       : debugedit-5.0-11.fc40.x86_64                       134/152 
  Installing       : curl-8.4.0-1.fc40.x86_64                           135/152 
  Installing       : rpm-sequoia-1.5.0-2.fc40.x86_64                    136/152 
  Installing       : rpm-libs-4.19.0-3.fc40.x86_64                      137/152 
  Running scriptlet: rpm-4.19.0-3.fc40.x86_64                           138/152 
  Installing       : rpm-4.19.0-3.fc40.x86_64                           138/152 
  Installing       : efi-srpm-macros-5-9.fc39.noarch                    139/152 
  Installing       : lua-srpm-macros-1-9.fc39.noarch                    140/152 
  Installing       : rpm-build-libs-4.19.0-3.fc40.x86_64                141/152 
  Installing       : ansible-srpm-macros-1-11.fc39.noarch               142/152 
  Installing       : fonts-srpm-macros-1:2.0.5-12.fc39.noarch           143/152 
  Installing       : forge-srpm-macros-0.1.0-1.fc40.noarch              144/152 
  Installing       : go-srpm-macros-3.3.1-1.fc40.noarch                 145/152 
  Installing       : python-srpm-macros-3.12-4.fc40.noarch              146/152 
  Installing       : redhat-rpm-config-271-1.fc40.noarch                147/152 
  Installing       : rpm-build-4.19.0-3.fc40.x86_64                     148/152 
  Installing       : pyproject-srpm-macros-1.10.0-1.fc40.noarch         149/152 
  Installing       : util-linux-2.39.2-1.fc40.x86_64                    150/152 
  Installing       : which-2.21-40.fc39.x86_64                          151/152 
  Installing       : info-7.1-1.fc40.x86_64                             152/152 
  Running scriptlet: filesystem-3.18-6.fc39.x86_64                      152/152 
  Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch   152/152 
  Running scriptlet: authselect-libs-1.4.3-1.fc40.x86_64                152/152 
  Running scriptlet: rpm-4.19.0-3.fc40.x86_64                           152/152 
  Running scriptlet: info-7.1-1.fc40.x86_64                             152/152 

Installed:
  alternatives-1.25-1.fc39.x86_64                                               
  ansible-srpm-macros-1-11.fc39.noarch                                          
  audit-libs-3.1.2-5.fc40.x86_64                                                
  authselect-1.4.3-1.fc40.x86_64                                                
  authselect-libs-1.4.3-1.fc40.x86_64                                           
  basesystem-11-18.fc39.noarch                                                  
  bash-5.2.21-2.fc40.x86_64                                                     
  binutils-2.41-15.fc40.x86_64                                                  
  binutils-gold-2.41-15.fc40.x86_64                                             
  bzip2-1.0.8-16.fc39.x86_64                                                    
  bzip2-libs-1.0.8-16.fc39.x86_64                                               
  ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch                              
  coreutils-9.4-1.fc40.x86_64                                                   
  coreutils-common-9.4-1.fc40.x86_64                                            
  cpio-2.14-5.fc40.x86_64                                                       
  cracklib-2.9.11-2.fc39.x86_64                                                 
  crypto-policies-20231113-1.gitb402e82.fc40.noarch                             
  curl-8.4.0-1.fc40.x86_64                                                      
  cyrus-sasl-lib-2.1.28-11.fc39.x86_64                                          
  debugedit-5.0-11.fc40.x86_64                                                  
  diffutils-3.10-3.fc39.x86_64                                                  
  dwz-0.15-3.fc39.x86_64                                                        
  ed-1.19-4.fc39.x86_64                                                         
  efi-srpm-macros-5-9.fc39.noarch                                               
  elfutils-0.190-4.fc40.x86_64                                                  
  elfutils-debuginfod-client-0.190-4.fc40.x86_64                                
  elfutils-default-yama-scope-0.190-4.fc40.noarch                               
  elfutils-libelf-0.190-4.fc40.x86_64                                           
  elfutils-libs-0.190-4.fc40.x86_64                                             
  fedora-gpg-keys-40-0.2.noarch                                                 
  fedora-release-40-0.20.noarch                                                 
  fedora-release-common-40-0.20.noarch                                          
  fedora-release-identity-basic-40-0.20.noarch                                  
  fedora-repos-40-0.2.noarch                                                    
  fedora-repos-rawhide-40-0.2.noarch                                            
  file-5.45-1.fc40.x86_64                                                       
  file-libs-5.45-1.fc40.x86_64                                                  
  filesystem-3.18-6.fc39.x86_64                                                 
  findutils-1:4.9.0-6.fc40.x86_64                                               
  fonts-srpm-macros-1:2.0.5-12.fc39.noarch                                      
  forge-srpm-macros-0.1.0-1.fc40.noarch                                         
  fpc-srpm-macros-1.3-8.fc39.noarch                                             
  gawk-5.2.2-2.fc39.x86_64                                                      
  gdb-minimal-13.2-12.fc40.x86_64                                               
  gdbm-1:1.23-4.fc39.x86_64                                                     
  gdbm-libs-1:1.23-4.fc39.x86_64                                                
  ghc-srpm-macros-1.6.1-3.fc40.noarch                                           
  glibc-2.38.9000-26.fc40.x86_64                                                
  glibc-common-2.38.9000-26.fc40.x86_64                                         
  glibc-gconv-extra-2.38.9000-26.fc40.x86_64                                    
  glibc-minimal-langpack-2.38.9000-26.fc40.x86_64                               
  gmp-1:6.2.1-5.fc39.x86_64                                                     
  gnat-srpm-macros-6-3.fc39.noarch                                              
  go-srpm-macros-3.3.1-1.fc40.noarch                                            
  grep-3.11-5.fc40.x86_64                                                       
  gzip-1.12-6.fc39.x86_64                                                       
  info-7.1-1.fc40.x86_64                                                        
  jansson-2.13.1-7.fc39.x86_64                                                  
  kernel-srpm-macros-1.0-20.fc39.noarch                                         
  keyutils-libs-1.6.1-7.fc39.x86_64                                             
  krb5-libs-1.21.2-2.fc40.x86_64                                                
  libacl-2.3.1-11.fc40.x86_64                                                   
  libarchive-3.7.2-1.fc40.x86_64                                                
  libattr-2.5.1-9.fc40.x86_64                                                   
  libblkid-2.39.2-1.fc40.x86_64                                                 
  libbrotli-1.1.0-1.fc40.x86_64                                                 
  libcap-2.69-1.fc40.x86_64                                                     
  libcap-ng-0.8.3-8.fc40.x86_64                                                 
  libcom_err-1.47.0-2.fc39.x86_64                                               
  libcurl-8.4.0-1.fc40.x86_64                                                   
  libeconf-0.5.2-1.fc40.x86_64                                                  
  libevent-2.1.12-9.fc39.x86_64                                                 
  libfdisk-2.39.2-1.fc40.x86_64                                                 
  libffi-3.4.4-4.fc39.x86_64                                                    
  libgcc-13.2.1-5.fc40.x86_64                                                   
  libgomp-13.2.1-5.fc40.x86_64                                                  
  libidn2-2.3.4-3.fc39.x86_64                                                   
  libmount-2.39.2-1.fc40.x86_64                                                 
  libnghttp2-1.58.0-1.fc40.x86_64                                               
  libnsl2-2.0.0-6.fc39.x86_64                                                   
  libpkgconf-1.9.5-2.fc39.x86_64                                                
  libpsl-0.21.2-4.fc39.x86_64                                                   
  libpwquality-1.4.5-6.fc39.x86_64                                              
  libselinux-3.6-0.rc2.1.fc40.x86_64                                            
  libsemanage-3.6-0.rc2.1.fc40.x86_64                                           
  libsepol-3.6-0.rc2.1.fc40.x86_64                                              
  libsigsegv-2.14-5.fc39.x86_64                                                 
  libsmartcols-2.39.2-1.fc40.x86_64                                             
  libssh-0.10.5-2.fc39.x86_64                                                   
  libssh-config-0.10.5-2.fc39.noarch                                            
  libstdc++-13.2.1-5.fc40.x86_64                                                
  libtasn1-4.19.0-3.fc39.x86_64                                                 
  libtirpc-1.3.4-0.fc40.x86_64                                                  
  libunistring-1.1-5.fc40.x86_64                                                
  libutempter-1.2.1-10.fc39.x86_64                                              
  libuuid-2.39.2-1.fc40.x86_64                                                  
  libverto-0.3.2-6.fc39.x86_64                                                  
  libxcrypt-4.4.36-2.fc39.x86_64                                                
  libxml2-2.12.1-1.fc40.x86_64                                                  
  libzstd-1.5.5-4.fc39.x86_64                                                   
  lua-libs-5.4.6-3.fc39.x86_64                                                  
  lua-srpm-macros-1-9.fc39.noarch                                               
  lz4-libs-1.9.4-4.fc39.x86_64                                                  
  mpfr-4.2.1-1.fc40.x86_64                                                      
  ncurses-base-6.4-8.20231001.fc40.noarch                                       
  ncurses-libs-6.4-8.20231001.fc40.x86_64                                       
  ocaml-srpm-macros-9-1.fc40.noarch                                             
  openblas-srpm-macros-2-14.fc39.noarch                                         
  openldap-2.6.6-1.fc39.x86_64                                                  
  openssl-libs-1:3.1.4-1.fc40.x86_64                                            
  p11-kit-0.25.3-1.fc40.x86_64                                                  
  p11-kit-trust-0.25.3-1.fc40.x86_64                                            
  package-notes-srpm-macros-0.5-9.fc39.noarch                                   
  pam-1.5.3-8.fc40.x86_64                                                       
  pam-libs-1.5.3-8.fc40.x86_64                                                  
  patch-2.7.6-22.fc39.x86_64                                                    
  pcre2-10.42-2.fc40.x86_64                                                     
  pcre2-syntax-10.42-2.fc40.noarch                                              
  perl-srpm-macros-1-51.fc39.noarch                                             
  pkgconf-1.9.5-2.fc39.x86_64                                                   
  pkgconf-m4-1.9.5-2.fc39.noarch                                                
  pkgconf-pkg-config-1.9.5-2.fc39.x86_64                                        
  popt-1.19-3.fc39.x86_64                                                       
  publicsuffix-list-dafsa-20230812-1.fc40.noarch                                
  pyproject-srpm-macros-1.10.0-1.fc40.noarch                                    
  python-srpm-macros-3.12-4.fc40.noarch                                         
  qt5-srpm-macros-5.15.11-1.fc40.noarch                                         
  qt6-srpm-macros-6.6.1-1.fc40.noarch                                           
  readline-8.2-4.fc39.x86_64                                                    
  redhat-rpm-config-271-1.fc40.noarch                                           
  rpm-4.19.0-3.fc40.x86_64                                                      
  rpm-build-4.19.0-3.fc40.x86_64                                                
  rpm-build-libs-4.19.0-3.fc40.x86_64                                           
  rpm-libs-4.19.0-3.fc40.x86_64                                                 
  rpm-sequoia-1.5.0-2.fc40.x86_64                                               
  rust-srpm-macros-25.2-2.fc40.noarch                                           
  sed-4.8-14.fc39.x86_64                                                        
  setup-2.14.5-1.fc40.noarch                                                    
  shadow-utils-2:4.14.0-2.fc40.x86_64                                           
  sqlite-libs-3.44.1-1.fc40.x86_64                                              
  systemd-libs-255~rc4-3.fc40.x86_64                                            
  tar-2:1.35-2.fc40.x86_64                                                      
  unzip-6.0-62.fc39.x86_64                                                      
  util-linux-2.39.2-1.fc40.x86_64                                               
  util-linux-core-2.39.2-1.fc40.x86_64                                          
  which-2.21-40.fc39.x86_64                                                     
  xxhash-libs-0.8.2-1.fc39.x86_64                                               
  xz-5.4.5-1.fc40.x86_64                                                        
  xz-libs-5.4.5-1.fc40.x86_64                                                   
  zip-3.0-39.fc40.x86_64                                                        
  zlib-1.2.13-5.fc40.x86_64                                                     
  zstd-1.5.5-4.fc39.x86_64                                                      

Complete!
Finish: installing minimal buildroot with dnf
Start: creating root cache
Finish: creating root cache
Finish: chroot init
INFO: Installed packages:
INFO: alternatives-1.25-1.fc39.x86_64
ansible-srpm-macros-1-11.fc39.noarch
audit-libs-3.1.2-5.fc40.x86_64
authselect-1.4.3-1.fc40.x86_64
authselect-libs-1.4.3-1.fc40.x86_64
basesystem-11-18.fc39.noarch
bash-5.2.21-2.fc40.x86_64
binutils-2.41-15.fc40.x86_64
binutils-gold-2.41-15.fc40.x86_64
bzip2-1.0.8-16.fc39.x86_64
bzip2-libs-1.0.8-16.fc39.x86_64
ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch
coreutils-9.4-1.fc40.x86_64
coreutils-common-9.4-1.fc40.x86_64
cpio-2.14-5.fc40.x86_64
cracklib-2.9.11-2.fc39.x86_64
crypto-policies-20231113-1.gitb402e82.fc40.noarch
curl-8.4.0-1.fc40.x86_64
cyrus-sasl-lib-2.1.28-11.fc39.x86_64
debugedit-5.0-11.fc40.x86_64
diffutils-3.10-3.fc39.x86_64
dwz-0.15-3.fc39.x86_64
ed-1.19-4.fc39.x86_64
efi-srpm-macros-5-9.fc39.noarch
elfutils-0.190-4.fc40.x86_64
elfutils-debuginfod-client-0.190-4.fc40.x86_64
elfutils-default-yama-scope-0.190-4.fc40.noarch
elfutils-libelf-0.190-4.fc40.x86_64
elfutils-libs-0.190-4.fc40.x86_64
fedora-gpg-keys-40-0.2.noarch
fedora-release-40-0.20.noarch
fedora-release-common-40-0.20.noarch
fedora-release-identity-basic-40-0.20.noarch
fedora-repos-40-0.2.noarch
fedora-repos-rawhide-40-0.2.noarch
file-5.45-1.fc40.x86_64
file-libs-5.45-1.fc40.x86_64
filesystem-3.18-6.fc39.x86_64
findutils-4.9.0-6.fc40.x86_64
fonts-srpm-macros-2.0.5-12.fc39.noarch
forge-srpm-macros-0.1.0-1.fc40.noarch
fpc-srpm-macros-1.3-8.fc39.noarch
gawk-5.2.2-2.fc39.x86_64
gdb-minimal-13.2-12.fc40.x86_64
gdbm-1.23-4.fc39.x86_64
gdbm-libs-1.23-4.fc39.x86_64
ghc-srpm-macros-1.6.1-3.fc40.noarch
glibc-2.38.9000-26.fc40.x86_64
glibc-common-2.38.9000-26.fc40.x86_64
glibc-gconv-extra-2.38.9000-26.fc40.x86_64
glibc-minimal-langpack-2.38.9000-26.fc40.x86_64
gmp-6.2.1-5.fc39.x86_64
gnat-srpm-macros-6-3.fc39.noarch
go-srpm-macros-3.3.1-1.fc40.noarch
gpg-pubkey-18b8e74c-62f2920f
gpg-pubkey-a15b79cc-63d04c2c
grep-3.11-5.fc40.x86_64
gzip-1.12-6.fc39.x86_64
info-7.1-1.fc40.x86_64
jansson-2.13.1-7.fc39.x86_64
kernel-srpm-macros-1.0-20.fc39.noarch
keyutils-libs-1.6.1-7.fc39.x86_64
krb5-libs-1.21.2-2.fc40.x86_64
libacl-2.3.1-11.fc40.x86_64
libarchive-3.7.2-1.fc40.x86_64
libattr-2.5.1-9.fc40.x86_64
libblkid-2.39.2-1.fc40.x86_64
libbrotli-1.1.0-1.fc40.x86_64
libcap-2.69-1.fc40.x86_64
libcap-ng-0.8.3-8.fc40.x86_64
libcom_err-1.47.0-2.fc39.x86_64
libcurl-8.4.0-1.fc40.x86_64
libeconf-0.5.2-1.fc40.x86_64
libevent-2.1.12-9.fc39.x86_64
libfdisk-2.39.2-1.fc40.x86_64
libffi-3.4.4-4.fc39.x86_64
libgcc-13.2.1-5.fc40.x86_64
libgomp-13.2.1-5.fc40.x86_64
libidn2-2.3.4-3.fc39.x86_64
libmount-2.39.2-1.fc40.x86_64
libnghttp2-1.58.0-1.fc40.x86_64
libnsl2-2.0.0-6.fc39.x86_64
libpkgconf-1.9.5-2.fc39.x86_64
libpsl-0.21.2-4.fc39.x86_64
libpwquality-1.4.5-6.fc39.x86_64
libselinux-3.6-0.rc2.1.fc40.x86_64
libsemanage-3.6-0.rc2.1.fc40.x86_64
libsepol-3.6-0.rc2.1.fc40.x86_64
libsigsegv-2.14-5.fc39.x86_64
libsmartcols-2.39.2-1.fc40.x86_64
libssh-0.10.5-2.fc39.x86_64
libssh-config-0.10.5-2.fc39.noarch
libstdc++-13.2.1-5.fc40.x86_64
libtasn1-4.19.0-3.fc39.x86_64
libtirpc-1.3.4-0.fc40.x86_64
libunistring-1.1-5.fc40.x86_64
libutempter-1.2.1-10.fc39.x86_64
libuuid-2.39.2-1.fc40.x86_64
libverto-0.3.2-6.fc39.x86_64
libxcrypt-4.4.36-2.fc39.x86_64
libxml2-2.12.1-1.fc40.x86_64
libzstd-1.5.5-4.fc39.x86_64
lua-libs-5.4.6-3.fc39.x86_64
lua-srpm-macros-1-9.fc39.noarch
lz4-libs-1.9.4-4.fc39.x86_64
mpfr-4.2.1-1.fc40.x86_64
ncurses-base-6.4-8.20231001.fc40.noarch
ncurses-libs-6.4-8.20231001.fc40.x86_64
ocaml-srpm-macros-9-1.fc40.noarch
openblas-srpm-macros-2-14.fc39.noarch
openldap-2.6.6-1.fc39.x86_64
openssl-libs-3.1.4-1.fc40.x86_64
p11-kit-0.25.3-1.fc40.x86_64
p11-kit-trust-0.25.3-1.fc40.x86_64
package-notes-srpm-macros-0.5-9.fc39.noarch
pam-1.5.3-8.fc40.x86_64
pam-libs-1.5.3-8.fc40.x86_64
patch-2.7.6-22.fc39.x86_64
pcre2-10.42-2.fc40.x86_64
pcre2-syntax-10.42-2.fc40.noarch
perl-srpm-macros-1-51.fc39.noarch
pkgconf-1.9.5-2.fc39.x86_64
pkgconf-m4-1.9.5-2.fc39.noarch
pkgconf-pkg-config-1.9.5-2.fc39.x86_64
popt-1.19-3.fc39.x86_64
publicsuffix-list-dafsa-20230812-1.fc40.noarch
pyproject-srpm-macros-1.10.0-1.fc40.noarch
python-srpm-macros-3.12-4.fc40.noarch
qt5-srpm-macros-5.15.11-1.fc40.noarch
qt6-srpm-macros-6.6.1-1.fc40.noarch
readline-8.2-4.fc39.x86_64
redhat-rpm-config-271-1.fc40.noarch
rpm-4.19.0-3.fc40.x86_64
rpm-build-4.19.0-3.fc40.x86_64
rpm-build-libs-4.19.0-3.fc40.x86_64
rpm-libs-4.19.0-3.fc40.x86_64
rpm-sequoia-1.5.0-2.fc40.x86_64
rust-srpm-macros-25.2-2.fc40.noarch
sed-4.8-14.fc39.x86_64
setup-2.14.5-1.fc40.noarch
shadow-utils-4.14.0-2.fc40.x86_64
sqlite-libs-3.44.1-1.fc40.x86_64
systemd-libs-255~rc4-3.fc40.x86_64
tar-1.35-2.fc40.x86_64
unzip-6.0-62.fc39.x86_64
util-linux-2.39.2-1.fc40.x86_64
util-linux-core-2.39.2-1.fc40.x86_64
which-2.21-40.fc39.x86_64
xxhash-libs-0.8.2-1.fc39.x86_64
xz-5.4.5-1.fc40.x86_64
xz-libs-5.4.5-1.fc40.x86_64
zip-3.0-39.fc40.x86_64
zlib-1.2.13-5.fc40.x86_64
zstd-1.5.5-4.fc39.x86_64
Start: buildsrpm
Start: rpmbuild -bs
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1699056000
Wrote: /builddir/build/SRPMS/avogadro2-libs-1.98.1-1.fc40.src.rpm
Finish: rpmbuild -bs
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root/var/log/dnf.log
Finish: buildsrpm
INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-6pzrl6pr/avogadro2-libs/avogadro2-libs.spec) Config(child) 1 minutes 33 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
INFO: Start(/var/lib/copr-rpmbuild/results/avogadro2-libs-1.98.1-1.fc40.src.rpm)  Config(fedora-rawhide-x86_64)
Start(bootstrap): chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1701804424.642033/root.
INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-x86_64-bootstrap-1701804424.642033/root.
INFO: calling preinit hooks
INFO: enabled root cache
INFO: enabled package manager cache
Start(bootstrap): cleaning package manager metadata
Finish(bootstrap): cleaning package manager metadata
Finish(bootstrap): chroot init
Start: chroot init
INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root.
INFO: calling preinit hooks
INFO: enabled root cache
Start: unpacking root cache
Finish: unpacking root cache
INFO: enabled package manager cache
Start: cleaning package manager metadata
Finish: cleaning package manager metadata
INFO: enabled HW Info plugin
Finish: chroot init
INFO: Buildroot is handled by package management downloaded with a bootstrap image:
  rpm-4.19.0-3.fc40.x86_64
  rpm-sequoia-1.5.0-2.fc40.x86_64
  python3-dnf-4.18.1-2.fc40.noarch
  python3-dnf-plugins-core-4.4.3-1.fc40.noarch
  yum-4.18.1-2.fc40.noarch
Start: build phase for avogadro2-libs-1.98.1-1.fc40.src.rpm
Start: build setup for avogadro2-libs-1.98.1-1.fc40.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1699056000
Wrote: /builddir/build/SRPMS/avogadro2-libs-1.98.1-1.fc40.src.rpm
No matches found for the following disable plugin patterns: local, spacewalk, versionlock
Copr repository                                  13 kB/s | 1.5 kB     00:00    
Copr repository                                  24 MB/s | 9.2 MB     00:00    
fedora                                          815 kB/s |  23 kB     00:00    
Dependencies resolved.
===========================================================================================
 Package                                Arch    Version                    Repo        Size
===========================================================================================
Installing:
 boost-devel                            x86_64  1.83.0-0.fc40              copr_base   12 M
 chrpath                                x86_64  0.16-21.fc39               fedora      30 k
 cmake                                  x86_64  3.27.7-1.fc40              fedora     8.0 M
 doxygen                                x86_64  2:1.9.8-1.fc40             fedora     5.3 M
 eigen3-devel                           noarch  3.4.0-12.fc39              fedora     1.2 M
 gcc                                    x86_64  13.2.1-5.fc40              fedora      34 M
 gcc-c++                                x86_64  13.2.1-5.fc40              fedora      13 M
 glew-devel                             x86_64  2.2.0-5.fc39               fedora     222 k
 graphviz                               x86_64  9.0.0-3.fc40               fedora     5.0 M
 hdf5-devel                             x86_64  1.12.1-15.fc40             fedora     1.3 M
 jsoncpp-devel                          x86_64  1.9.5-5.fc39               fedora      29 k
 libarchive-devel                       x86_64  3.7.2-1.fc40               fedora     134 k
 make                                   x86_64  1:4.4.1-2.fc39             fedora     589 k
 mesa-libGLU-devel                      x86_64  9.0.3-1.fc39               fedora      12 k
 mmtf-cpp-devel                         x86_64  1.1.0-3.fc39               fedora      30 k
 openbabel-devel                        x86_64  3.1.1-21.fc40              copr_base  192 k
 python3-devel                          x86_64  3.12.0-2.fc40              fedora     311 k
 qt5-qtbase-devel                       x86_64  5.15.11-7.fc40             fedora     3.5 M
 qt5-qtsvg-devel                        x86_64  5.15.11-1.fc40             fedora      32 k
 qt5-qttools-devel                      x86_64  5.15.11-1.fc40             fedora     228 k
 spglib-devel                           x86_64  2.0.2-3.fc39               fedora      14 k
Installing dependencies:
 abattis-cantarell-vf-fonts             noarch  0.301-10.fc39              fedora     121 k
 adobe-mappings-cmap                    noarch  20230622-1.fc39            fedora     2.1 M
 adobe-mappings-cmap-deprecated         noarch  20230622-1.fc39            fedora     113 k
 adobe-mappings-pdf                     noarch  20190401-5.fc39            fedora     698 k
 annobin-docs                           noarch  12.32-1.fc40               fedora      92 k
 annobin-plugin-gcc                     x86_64  12.32-1.fc40               fedora     959 k
 avahi-libs                             x86_64  0.8-24.fc39                fedora      67 k
 boost                                  x86_64  1.83.0-0.fc40              copr_base   14 k
 boost-atomic                           x86_64  1.83.0-0.fc40              copr_base   20 k
 boost-chrono                           x86_64  1.83.0-0.fc40              copr_base   26 k
 boost-container                        x86_64  1.83.0-0.fc40              copr_base   40 k
 boost-context                          x86_64  1.83.0-0.fc40              copr_base   17 k
 boost-contract                         x86_64  1.83.0-0.fc40              copr_base   46 k
 boost-coroutine                        x86_64  1.83.0-0.fc40              copr_base   20 k
 boost-date-time                        x86_64  1.83.0-0.fc40              copr_base   16 k
 boost-fiber                            x86_64  1.83.0-0.fc40              copr_base   42 k
 boost-filesystem                       x86_64  1.83.0-0.fc40              copr_base   68 k
 boost-graph                            x86_64  1.83.0-0.fc40              copr_base  152 k
 boost-iostreams                        x86_64  1.83.0-0.fc40              copr_base   42 k
 boost-json                             x86_64  1.83.0-0.fc40              copr_base  143 k
 boost-locale                           x86_64  1.83.0-0.fc40              copr_base  212 k
 boost-log                              x86_64  1.83.0-0.fc40              copr_base  493 k
 boost-math                             x86_64  1.83.0-0.fc40              copr_base  218 k
 boost-nowide                           x86_64  1.83.0-0.fc40              copr_base   21 k
 boost-numpy3                           x86_64  1.83.0-0.fc40              copr_base   30 k
 boost-program-options                  x86_64  1.83.0-0.fc40              copr_base  110 k
 boost-python3                          x86_64  1.83.0-0.fc40              copr_base   97 k
 boost-random                           x86_64  1.83.0-0.fc40              copr_base   24 k
 boost-regex                            x86_64  1.83.0-0.fc40              copr_base  112 k
 boost-serialization                    x86_64  1.83.0-0.fc40              copr_base  135 k
 boost-stacktrace                       x86_64  1.83.0-0.fc40              copr_base   30 k
 boost-system                           x86_64  1.83.0-0.fc40              copr_base   16 k
 boost-test                             x86_64  1.83.0-0.fc40              copr_base  240 k
 boost-thread                           x86_64  1.83.0-0.fc40              copr_base   62 k
 boost-timer                            x86_64  1.83.0-0.fc40              copr_base   22 k
 boost-type_erasure                     x86_64  1.83.0-0.fc40              copr_base   34 k
 boost-wave                             x86_64  1.83.0-0.fc40              copr_base  225 k
 cairo                                  x86_64  1.18.0-1.fc40              fedora     710 k
 cairo-gobject                          x86_64  1.18.0-1.fc40              fedora      19 k
 clang-libs                             x86_64  17.0.6-1.fc40              fedora      23 M
 clang-resource-filesystem              noarch  17.0.6-1.fc40              fedora      14 k
 cmake-data                             noarch  3.27.7-1.fc40              fedora     2.2 M
 cmake-filesystem                       x86_64  3.27.7-1.fc40              fedora      19 k
 cmake-rpm-macros                       noarch  3.27.7-1.fc40              fedora      19 k
 cpp                                    x86_64  13.2.1-5.fc40              fedora      11 M
 crypto-policies-scripts                noarch  20231113-1.gitb402e82.fc40 fedora     117 k
 cups-libs                              x86_64  1:2.4.7-3.fc40             fedora     267 k
 dbus-libs                              x86_64  1:1.14.10-1.fc40           fedora     155 k
 default-fonts-core-sans                noarch  4.0-9.fc40                 fedora      32 k
 double-conversion                      x86_64  3.1.5-9.fc39               fedora      49 k
 duktape                                x86_64  2.7.0-5.fc39               fedora     170 k
 emacs-filesystem                       noarch  1:29.1-14.fc40             fedora     7.4 k
 expat                                  x86_64  2.5.0-3.fc39               fedora     110 k
 flexiblas                              x86_64  3.3.1-5.fc39               fedora      33 k
 flexiblas-netlib                       x86_64  3.3.1-5.fc39               fedora     3.1 M
 flexiblas-openblas-openmp              x86_64  3.3.1-5.fc39               fedora      17 k
 fontconfig                             x86_64  2.14.2-5.fc40              fedora     297 k
 fonts-filesystem                       noarch  1:2.0.5-12.fc39            fedora     8.2 k
 freetype                               x86_64  2.13.1-2.fc39              fedora     414 k
 fribidi                                x86_64  1.0.13-2.fc39              fedora      91 k
 gc                                     x86_64  8.2.2-4.fc39               fedora     110 k
 gcc-gfortran                           x86_64  13.2.1-5.fc40              fedora      12 M
 gcc-plugin-annobin                     x86_64  13.2.1-5.fc40              fedora      49 k
 gd                                     x86_64  2.3.3-12.fc39              fedora     139 k
 gdk-pixbuf2                            x86_64  2.42.10-5.fc39             fedora     484 k
 gl-manpages                            noarch  1.1-29.20190306.fc40       fedora     1.2 M
 glib2                                  x86_64  2.78.1-1.fc40              fedora     2.8 M
 glibc-devel                            x86_64  2.38.9000-26.fc40          fedora     100 k
 glibc-headers-x86                      noarch  2.38.9000-26.fc40          fedora     585 k
 glx-utils                              x86_64  9.0.0-4.fc40               fedora      73 k
 gnutls                                 x86_64  3.8.2-2.fc40               fedora     1.1 M
 google-droid-sans-fonts                noarch  20200215-17.fc40           fedora     2.7 M
 google-noto-fonts-common               noarch  20230801-4.fc40            fedora      17 k
 google-noto-sans-vf-fonts              noarch  20230801-4.fc40            fedora     583 k
 graphite2                              x86_64  1.3.14-13.fc40             fedora      95 k
 groff-base                             x86_64  1.23.0-3.fc40              fedora     1.1 M
 gts                                    x86_64  0.7.6-46.20121130.fc39     fedora     240 k
 guile22                                x86_64  2.2.7-9.fc39               fedora     6.5 M
 harfbuzz                               x86_64  8.3.0-2.fc40               fedora     995 k
 hdf5                                   x86_64  1.12.1-15.fc40             fedora     2.2 M
 highway                                x86_64  1.0.7-1.fc40               fedora     481 k
 hwdata                                 noarch  0.376-1.fc40               fedora     1.6 M
 inchi-libs                             x86_64  1.0.6-7.fc39               fedora     682 k
 jbig2dec-libs                          x86_64  0.20-1.fc40                fedora      73 k
 jbigkit-libs                           x86_64  2.1-27.fc40                fedora      53 k
 jsoncpp                                x86_64  1.9.5-5.fc39               fedora      99 k
 kernel-headers                         x86_64  6.7.0-0.rc3.git0.1.fc40    fedora     1.6 M
 lasi                                   x86_64  1.1.3-11.fc39              fedora      54 k
 lcms2                                  x86_64  2.15-2.fc39                fedora     177 k
 libGLEW                                x86_64  2.2.0-5.fc39               fedora     175 k
 libICE                                 x86_64  1.1.1-1.fc40               fedora      74 k
 libSM                                  x86_64  1.2.4-1.fc40               fedora      43 k
 libX11                                 x86_64  1.8.7-1.fc40               fedora     647 k
 libX11-common                          noarch  1.8.7-1.fc40               fedora     176 k
 libX11-devel                           x86_64  1.8.7-1.fc40               fedora     1.0 M
 libX11-xcb                             x86_64  1.8.7-1.fc40               fedora      12 k
 libXau                                 x86_64  1.0.11-4.fc40              fedora      31 k
 libXau-devel                           x86_64  1.0.11-4.fc40              fedora      14 k
 libXext                                x86_64  1.3.5-4.fc40               fedora      39 k
 libXfixes                              x86_64  6.0.1-1.fc40               fedora      19 k
 libXft                                 x86_64  2.3.8-4.fc40               fedora      72 k
 libXpm                                 x86_64  3.5.17-1.fc40              fedora      65 k
 libXrender                             x86_64  0.9.11-4.fc40              fedora      27 k
 libXt                                  x86_64  1.3.0-1.fc40               fedora     179 k
 libXxf86vm                             x86_64  1.1.5-4.fc40               fedora      18 k
 libaec                                 x86_64  1.0.6-5.fc39               fedora      42 k
 libaec-devel                           x86_64  1.0.6-5.fc39               fedora      12 k
 libaom                                 x86_64  3.7.1-1.fc40               fedora     1.8 M
 libavif                                x86_64  0.11.1-11.fc39             fedora      84 k
 libb2                                  x86_64  0.98.1-9.fc39              fedora      25 k
 libdatrie                              x86_64  0.2.13-7.fc39              fedora      32 k
 libdav1d                               x86_64  1.2.1-2.fc39               fedora     618 k
 libdrm                                 x86_64  2.4.117-1.fc40             fedora     156 k
 libedit                                x86_64  3.1-48.20230828cvs.fc40    fedora     107 k
 libevdev                               x86_64  1.13.1-2.fc39              fedora      44 k
 libgfortran                            x86_64  13.2.1-5.fc40              fedora     906 k
 libglvnd                               x86_64  1:1.7.0-1.fc40             fedora     133 k
 libglvnd-core-devel                    x86_64  1:1.7.0-1.fc40             fedora      17 k
 libglvnd-devel                         x86_64  1:1.7.0-1.fc40             fedora     162 k
 libglvnd-egl                           x86_64  1:1.7.0-1.fc40             fedora      36 k
 libglvnd-gles                          x86_64  1:1.7.0-1.fc40             fedora      31 k
 libglvnd-glx                           x86_64  1:1.7.0-1.fc40             fedora     142 k
 libglvnd-opengl                        x86_64  1:1.7.0-1.fc40             fedora      42 k
 libgs                                  x86_64  10.02.1-4.fc40             fedora     3.4 M
 libgudev                               x86_64  238-2.fc39                 fedora      35 k
 libicu                                 x86_64  73.2-2.fc39                fedora      11 M
 libicu-devel                           x86_64  73.2-2.fc39                fedora     924 k
 libijs                                 x86_64  0.35-19.fc39               fedora      29 k
 libimagequant                          x86_64  4.0.3-1.fc40               fedora     321 k
 libinput                               x86_64  1.24.0-1.fc40              fedora     214 k
 libjpeg-turbo                          x86_64  2.1.4-3.fc39               fedora     183 k
 libjxl                                 x86_64  1:0.8.2-3.fc40             fedora     1.2 M
 liblerc                                x86_64  4.0.0-4.fc39               fedora     201 k
 libmpc                                 x86_64  1.3.1-3.fc39               fedora      70 k
 libpaper                               x86_64  1:2.1.1-1.fc39             fedora      27 k
 libpciaccess                           x86_64  0.16-9.fc39                fedora      26 k
 libpng                                 x86_64  2:1.6.40-1.fc40            fedora     119 k
 libproxy                               x86_64  0.5.3-3.fc40               fedora      48 k
 libquadmath                            x86_64  13.2.1-5.fc40              fedora     197 k
 libquadmath-devel                      x86_64  13.2.1-5.fc40              fedora      39 k
 librsvg2                               x86_64  2.57.0-3.fc40              fedora     1.6 M
 libstdc++-devel                        x86_64  13.2.1-5.fc40              fedora     2.6 M
 libthai                                x86_64  0.1.29-6.fc39              fedora     213 k
 libtiff                                x86_64  4.5.0-3.fc40               fedora     305 k
 libtool-ltdl                           x86_64  2.4.7-8.fc40               fedora      36 k
 libuv                                  x86_64  1:1.47.0-3.fc40            fedora     250 k
 libvmaf                                x86_64  2.3.0-6.fc39               fedora     180 k
 libwacom                               x86_64  2.9.0-1.fc40               fedora      43 k
 libwacom-data                          noarch  2.9.0-1.fc40               fedora     194 k
 libwayland-client                      x86_64  1.22.0-2.fc39              fedora      34 k
 libwayland-server                      x86_64  1.22.0-2.fc39              fedora      42 k
 libwebp                                x86_64  1.3.2-2.fc40               fedora     284 k
 libxcb                                 x86_64  1.16-2.fc40                fedora     238 k
 libxcb-devel                           x86_64  1.16-2.fc40                fedora     1.4 M
 libxcrypt-devel                        x86_64  4.4.36-2.fc39              fedora      30 k
 libxkbcommon                           x86_64  1.6.0-1.fc40               fedora     142 k
 libxkbcommon-x11                       x86_64  1.6.0-1.fc40               fedora      22 k
 libxshmfence                           x86_64  1.3.2-1.fc40               fedora      12 k
 llvm-libs                              x86_64  17.0.6-1.fc40              fedora      27 M
 mesa-libEGL                            x86_64  23.3.0-1.fc40              fedora     133 k
 mesa-libEGL-devel                      x86_64  23.3.0-1.fc40              fedora      21 k
 mesa-libGL                             x86_64  23.3.0-1.fc40              fedora     175 k
 mesa-libGLU                            x86_64  9.0.3-1.fc39               fedora     160 k
 mesa-libgbm                            x86_64  23.3.0-1.fc40              fedora      45 k
 mesa-libglapi                          x86_64  23.3.0-1.fc40              fedora      52 k
 mpdecimal                              x86_64  2.5.1-7.fc39               fedora      89 k
 msgpack                                x86_64  3.1.0-13.fc39              fedora      29 k
 msgpack-devel                          x86_64  3.1.0-13.fc39              fedora     428 k
 mtdev                                  x86_64  1.1.6-6.fc39               fedora      20 k
 ncurses                                x86_64  6.4-8.20231001.fc40        fedora     418 k
 netpbm                                 x86_64  11.02.00-3.fc40            fedora     184 k
 nettle                                 x86_64  3.9.1-2.fc39               fedora     425 k
 nspr                                   x86_64  4.35.0-16.fc40             fedora     138 k
 nss                                    x86_64  3.95.0-1.fc40              fedora     695 k
 nss-softokn                            x86_64  3.95.0-1.fc40              fedora     414 k
 nss-softokn-freebl                     x86_64  3.95.0-1.fc40              fedora     351 k
 nss-sysinit                            x86_64  3.95.0-1.fc40              fedora      18 k
 nss-util                               x86_64  3.95.0-1.fc40              fedora      87 k
 openbabel-libs                         x86_64  3.1.1-21.fc40              copr_base  3.7 M
 openblas                               x86_64  0.3.25-1.fc40              fedora      38 k
 openblas-openmp                        x86_64  0.3.25-1.fc40              fedora     5.0 M
 openjpeg2                              x86_64  2.5.0-5.fc40               fedora     178 k
 openssl-devel                          x86_64  1:3.1.4-1.fc40             fedora     2.6 M
 pango                                  x86_64  1.51.0-1.fc40              fedora     343 k
 pcre2-utf16                            x86_64  10.42-2.fc40               fedora     213 k
 perl-AutoLoader                        noarch  5.74-503.fc40              fedora      21 k
 perl-B                                 x86_64  1.88-503.fc40              fedora     177 k
 perl-Carp                              noarch  1.54-500.fc39              fedora      29 k
 perl-Class-Struct                      noarch  0.68-503.fc40              fedora      22 k
 perl-Data-Dumper                       x86_64  2.188-501.fc39             fedora      56 k
 perl-Digest                            noarch  1.20-500.fc39              fedora      25 k
 perl-Digest-MD5                        x86_64  2.58-501.fc40              fedora      35 k
 perl-DynaLoader                        x86_64  1.54-503.fc40              fedora      26 k
 perl-Encode                            x86_64  4:3.20-501.fc40            fedora     1.7 M
 perl-English                           noarch  1.11-503.fc40              fedora      14 k
 perl-Errno                             x86_64  1.37-503.fc40              fedora      15 k
 perl-Exporter                          noarch  5.77-500.fc39              fedora      31 k
 perl-Fcntl                             x86_64  1.15-503.fc40              fedora      21 k
 perl-File-Basename                     noarch  2.86-503.fc40              fedora      17 k
 perl-File-Find                         noarch  1.43-503.fc40              fedora      26 k
 perl-File-Path                         noarch  2.18-501.fc40              fedora      35 k
 perl-File-Temp                         noarch  1:0.231.100-501.fc40       fedora      59 k
 perl-File-stat                         noarch  1.13-503.fc40              fedora      17 k
 perl-FileHandle                        noarch  2.05-503.fc40              fedora      16 k
 perl-Getopt-Long                       noarch  1:2.57-1.fc40              fedora      63 k
 perl-Getopt-Std                        noarch  1.13-503.fc40              fedora      16 k
 perl-HTTP-Tiny                         noarch  0.088-3.fc39               fedora      56 k
 perl-IO                                x86_64  1.52-503.fc40              fedora      82 k
 perl-IO-Socket-IP                      noarch  0.42-1.fc39                fedora      42 k
 perl-IO-Socket-SSL                     noarch  2.084-1.fc40               fedora     225 k
 perl-IPC-Open3                         noarch  1.22-503.fc40              fedora      22 k
 perl-MIME-Base64                       x86_64  3.16-501.fc40              fedora      29 k
 perl-Mozilla-CA                        noarch  20230821-1.fc40            fedora      13 k
 perl-Net-SSLeay                        x86_64  1.92-10.fc39               fedora     360 k
 perl-POSIX                             x86_64  2.13-503.fc40              fedora      97 k
 perl-PathTools                         x86_64  3.89-500.fc39              fedora      87 k
 perl-Pod-Escapes                       noarch  1:1.07-501.fc40            fedora      19 k
 perl-Pod-Perldoc                       noarch  3.28.01-501.fc39           fedora      86 k
 perl-Pod-Simple                        noarch  1:3.45-4.fc39              fedora     218 k
 perl-Pod-Usage                         noarch  4:2.03-500.fc39            fedora      39 k
 perl-Scalar-List-Utils                 x86_64  5:1.63-500.fc39            fedora      72 k
 perl-SelectSaver                       noarch  1.02-503.fc40              fedora      12 k
 perl-Socket                            x86_64  4:2.037-3.fc39             fedora      55 k
 perl-Storable                          x86_64  1:3.32-500.fc39            fedora      99 k
 perl-Symbol                            noarch  1.09-503.fc40              fedora      14 k
 perl-Term-ANSIColor                    noarch  5.01-502.fc40              fedora      47 k
 perl-Term-Cap                          noarch  1.18-500.fc39              fedora      22 k
 perl-Text-ParseWords                   noarch  3.31-500.fc39              fedora      16 k
 perl-Text-Tabs+Wrap                    noarch  2023.0511-3.fc39           fedora      22 k
 perl-Time-Local                        noarch  2:1.350-3.fc39             fedora      34 k
 perl-URI                               noarch  5.21-1.fc40                fedora     125 k
 perl-base                              noarch  2.27-503.fc40              fedora      16 k
 perl-constant                          noarch  1.33-501.fc39              fedora      22 k
 perl-if                                noarch  0.61.000-503.fc40          fedora      14 k
 perl-interpreter                       x86_64  4:5.38.2-503.fc40          fedora      72 k
 perl-libnet                            noarch  3.15-501.fc39              fedora     129 k
 perl-libs                              x86_64  4:5.38.2-503.fc40          fedora     2.3 M
 perl-locale                            noarch  1.10-503.fc40              fedora      14 k
 perl-mro                               x86_64  1.28-503.fc40              fedora      29 k
 perl-overload                          noarch  1.37-503.fc40              fedora      46 k
 perl-overloading                       noarch  0.02-503.fc40              fedora      13 k
 perl-parent                            noarch  1:0.241-500.fc39           fedora      14 k
 perl-podlators                         noarch  1:5.01-500.fc39            fedora     125 k
 perl-vars                              noarch  1.05-503.fc40              fedora      13 k
 pixman                                 x86_64  0.42.2-2.fc39              fedora     288 k
 poppler                                x86_64  23.08.0-1.fc40             copr_base  1.2 M
 poppler-data                           noarch  0.4.11-5.fc39              fedora     2.0 M
 poppler-glib                           x86_64  23.08.0-1.fc40             copr_base  185 k
 pyproject-rpm-macros                   noarch  1.10.0-1.fc40              fedora      41 k
 python-pip-wheel                       noarch  23.2.1-1.fc39              fedora     1.5 M
 python-rpm-macros                      noarch  3.12-4.fc40                fedora      19 k
 python3                                x86_64  3.12.0-2.fc40              fedora      26 k
 python3-libs                           x86_64  3.12.0-2.fc40              fedora     9.2 M
 python3-numpy                          x86_64  1:1.26.0-2.fc40            fedora     7.5 M
 python3-packaging                      noarch  23.2-2.fc40                fedora     125 k
 python3-rpm-generators                 noarch  14-8.fc40                  fedora      30 k
 python3-rpm-macros                     noarch  3.12-4.fc40                fedora      14 k
 qt-settings                            noarch  39.0-2.fc40                fedora     9.5 k
 qt5-designer                           x86_64  5.15.11-1.fc40             fedora     161 k
 qt5-doctools                           x86_64  5.15.11-1.fc40             fedora     696 k
 qt5-linguist                           x86_64  5.15.11-1.fc40             fedora     882 k
 qt5-qtbase                             x86_64  5.15.11-7.fc40             fedora     3.5 M
 qt5-qtbase-common                      noarch  5.15.11-7.fc40             fedora      12 k
 qt5-qtbase-gui                         x86_64  5.15.11-7.fc40             fedora     6.4 M
 qt5-qtdeclarative                      x86_64  5.15.11-2.fc40             fedora     4.3 M
 qt5-qtsvg                              x86_64  5.15.11-1.fc40             fedora     186 k
 qt5-qttools                            x86_64  5.15.11-1.fc40             fedora      41 k
 qt5-qttools-common                     noarch  5.15.11-1.fc40             fedora      11 k
 qt5-qttools-libs-designer              x86_64  5.15.11-1.fc40             fedora     2.7 M
 qt5-qttools-libs-designercomponents    x86_64  5.15.11-1.fc40             fedora     787 k
 qt5-qttools-libs-help                  x86_64  5.15.11-1.fc40             fedora     157 k
 qt5-rpm-macros                         noarch  5.15.11-1.fc40             fedora      10 k
 rav1e-libs                             x86_64  0.6.6-3.fc40               fedora     1.0 M
 rhash                                  x86_64  1.4.3-3.fc39               fedora     194 k
 rsvg-pixbuf-loader                     x86_64  2.57.0-3.fc40              fedora      16 k
 shared-mime-info                       x86_64  2.3-1.fc40                 fedora     391 k
 spglib                                 x86_64  2.0.2-3.fc39               fedora     209 k
 svt-av1-libs                           x86_64  1.4.1-3.fc39               fedora     2.0 M
 tzdata                                 noarch  2023c-4.fc40               fedora     717 k
 urw-base35-bookman-fonts               noarch  20200910-18.fc39           fedora     847 k
 urw-base35-c059-fonts                  noarch  20200910-18.fc39           fedora     874 k
 urw-base35-d050000l-fonts              noarch  20200910-18.fc39           fedora      76 k
 urw-base35-fonts                       noarch  20200910-18.fc39           fedora      10 k
 urw-base35-fonts-common                noarch  20200910-18.fc39           fedora      21 k
 urw-base35-gothic-fonts                noarch  20200910-18.fc39           fedora     643 k
 urw-base35-nimbus-mono-ps-fonts        noarch  20200910-18.fc39           fedora     795 k
 urw-base35-nimbus-roman-fonts          noarch  20200910-18.fc39           fedora     856 k
 urw-base35-nimbus-sans-fonts           noarch  20200910-18.fc39           fedora     1.3 M
 urw-base35-p052-fonts                  noarch  20200910-18.fc39           fedora     974 k
 urw-base35-standard-symbols-ps-fonts   noarch  20200910-18.fc39           fedora      42 k
 urw-base35-z003-fonts                  noarch  20200910-18.fc39           fedora     276 k
 vim-filesystem                         noarch  2:9.0.2120-1.fc40          fedora      18 k
 vulkan-headers                         noarch  1.3.268.0-1.fc40           fedora     1.2 M
 vulkan-loader                          x86_64  1.3.268.0-1.fc40           fedora     148 k
 vulkan-loader-devel                    x86_64  1.3.268.0-1.fc40           fedora      11 k
 xapian-core-libs                       x86_64  1.4.23-1.fc39              fedora     771 k
 xcb-util                               x86_64  0.4.1-3.fc39               fedora      18 k
 xcb-util-image                         x86_64  0.4.1-3.fc39               fedora      19 k
 xcb-util-keysyms                       x86_64  0.4.1-3.fc39               fedora      14 k
 xcb-util-renderutil                    x86_64  0.3.10-3.fc39              fedora      17 k
 xcb-util-wm                            x86_64  0.4.2-3.fc39               fedora      31 k
 xkeyboard-config                       noarch  2.40-2.fc40                fedora     972 k
 xml-common                             noarch  0.6.3-62.fc40              fedora      31 k
 xorg-x11-proto-devel                   noarch  2023.2-3.fc40              fedora     298 k
 zlib-devel                             x86_64  1.2.13-5.fc40              fedora      45 k

Transaction Summary
===========================================================================================
Install  326 Packages

Total download size: 310 M
Installed size: 1.3 G
Downloading Packages:
(1/326): boost-1.83.0-0.fc40.x86_64.rpm         453 kB/s |  14 kB     00:00    
(2/326): boost-atomic-1.83.0-0.fc40.x86_64.rpm  496 kB/s |  20 kB     00:00    
(3/326): boost-chrono-1.83.0-0.fc40.x86_64.rpm  625 kB/s |  26 kB     00:00    
(4/326): boost-container-1.83.0-0.fc40.x86_64.r 3.2 MB/s |  40 kB     00:00    
(5/326): boost-context-1.83.0-0.fc40.x86_64.rpm 1.8 MB/s |  17 kB     00:00    
(6/326): boost-contract-1.83.0-0.fc40.x86_64.rp 3.2 MB/s |  46 kB     00:00    
(7/326): boost-coroutine-1.83.0-0.fc40.x86_64.r 1.5 MB/s |  20 kB     00:00    
(8/326): boost-date-time-1.83.0-0.fc40.x86_64.r 1.7 MB/s |  16 kB     00:00    
(9/326): boost-fiber-1.83.0-0.fc40.x86_64.rpm   1.4 MB/s |  42 kB     00:00    
(10/326): boost-filesystem-1.83.0-0.fc40.x86_64 1.8 MB/s |  68 kB     00:00    
(11/326): boost-graph-1.83.0-0.fc40.x86_64.rpm  1.6 MB/s | 152 kB     00:00    
(12/326): boost-iostreams-1.83.0-0.fc40.x86_64. 380 kB/s |  42 kB     00:00    
(13/326): boost-devel-1.83.0-0.fc40.x86_64.rpm   48 MB/s |  12 MB     00:00    
(14/326): boost-json-1.83.0-0.fc40.x86_64.rpm   1.2 MB/s | 143 kB     00:00    
(15/326): boost-locale-1.83.0-0.fc40.x86_64.rpm 2.2 MB/s | 212 kB     00:00    
(16/326): boost-log-1.83.0-0.fc40.x86_64.rpm     30 MB/s | 493 kB     00:00    
(17/326): boost-nowide-1.83.0-0.fc40.x86_64.rpm 1.2 MB/s |  21 kB     00:00    
(18/326): boost-math-1.83.0-0.fc40.x86_64.rpm    11 MB/s | 218 kB     00:00    
(19/326): boost-numpy3-1.83.0-0.fc40.x86_64.rpm 3.2 MB/s |  30 kB     00:00    
(20/326): boost-program-options-1.83.0-0.fc40.x  11 MB/s | 110 kB     00:00    
(21/326): boost-python3-1.83.0-0.fc40.x86_64.rp 9.0 MB/s |  97 kB     00:00    
(22/326): boost-random-1.83.0-0.fc40.x86_64.rpm 2.7 MB/s |  24 kB     00:00    
(23/326): boost-regex-1.83.0-0.fc40.x86_64.rpm   11 MB/s | 112 kB     00:00    
(24/326): boost-serialization-1.83.0-0.fc40.x86  13 MB/s | 135 kB     00:00    
(25/326): boost-stacktrace-1.83.0-0.fc40.x86_64 3.4 MB/s |  30 kB     00:00    
(26/326): boost-system-1.83.0-0.fc40.x86_64.rpm 1.8 MB/s |  16 kB     00:00    
(27/326): boost-test-1.83.0-0.fc40.x86_64.rpm    18 MB/s | 240 kB     00:00    
(28/326): boost-thread-1.83.0-0.fc40.x86_64.rpm 5.2 MB/s |  62 kB     00:00    
(29/326): boost-timer-1.83.0-0.fc40.x86_64.rpm  2.0 MB/s |  22 kB     00:00    
(30/326): boost-type_erasure-1.83.0-0.fc40.x86_ 3.8 MB/s |  34 kB     00:00    
(31/326): boost-wave-1.83.0-0.fc40.x86_64.rpm    18 MB/s | 225 kB     00:00    
(32/326): poppler-23.08.0-1.fc40.x86_64.rpm      46 MB/s | 1.2 MB     00:00    
(33/326): poppler-glib-23.08.0-1.fc40.x86_64.rp  16 MB/s | 185 kB     00:00    
(34/326): openbabel-devel-3.1.1-21.fc40.x86_64. 3.2 MB/s | 192 kB     00:00    
(35/326): openbabel-libs-3.1.1-21.fc40.x86_64.r  32 MB/s | 3.7 MB     00:00    
(36/326): abattis-cantarell-vf-fonts-0.301-10.f 307 kB/s | 121 kB     00:00    
(37/326): adobe-mappings-cmap-deprecated-202306 311 kB/s | 113 kB     00:00    
(38/326): annobin-docs-12.32-1.fc40.noarch.rpm  1.2 MB/s |  92 kB     00:00    
(39/326): adobe-mappings-pdf-20190401-5.fc39.no 2.8 MB/s | 698 kB     00:00    
(40/326): avahi-libs-0.8-24.fc39.x86_64.rpm     794 kB/s |  67 kB     00:00    
(41/326): adobe-mappings-cmap-20230622-1.fc39.n 2.9 MB/s | 2.1 MB     00:00    
(42/326): cairo-gobject-1.18.0-1.fc40.x86_64.rp 199 kB/s |  19 kB     00:00    
(43/326): cairo-1.18.0-1.fc40.x86_64.rpm        3.5 MB/s | 710 kB     00:00    
(44/326): chrpath-0.16-21.fc39.x86_64.rpm       264 kB/s |  30 kB     00:00    
(45/326): annobin-plugin-gcc-12.32-1.fc40.x86_6 2.1 MB/s | 959 kB     00:00    
(46/326): clang-resource-filesystem-17.0.6-1.fc 165 kB/s |  14 kB     00:00    
(47/326): cmake-data-3.27.7-1.fc40.noarch.rpm   7.9 MB/s | 2.2 MB     00:00    
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Installed:
  abattis-cantarell-vf-fonts-0.301-10.fc39.noarch                               
  adobe-mappings-cmap-20230622-1.fc39.noarch                                    
  adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch                         
  adobe-mappings-pdf-20190401-5.fc39.noarch                                     
  annobin-docs-12.32-1.fc40.noarch                                              
  annobin-plugin-gcc-12.32-1.fc40.x86_64                                        
  avahi-libs-0.8-24.fc39.x86_64                                                 
  boost-1.83.0-0.fc40.x86_64                                                    
  boost-atomic-1.83.0-0.fc40.x86_64                                             
  boost-chrono-1.83.0-0.fc40.x86_64                                             
  boost-container-1.83.0-0.fc40.x86_64                                          
  boost-context-1.83.0-0.fc40.x86_64                                            
  boost-contract-1.83.0-0.fc40.x86_64                                           
  boost-coroutine-1.83.0-0.fc40.x86_64                                          
  boost-date-time-1.83.0-0.fc40.x86_64                                          
  boost-devel-1.83.0-0.fc40.x86_64                                              
  boost-fiber-1.83.0-0.fc40.x86_64                                              
  boost-filesystem-1.83.0-0.fc40.x86_64                                         
  boost-graph-1.83.0-0.fc40.x86_64                                              
  boost-iostreams-1.83.0-0.fc40.x86_64                                          
  boost-json-1.83.0-0.fc40.x86_64                                               
  boost-locale-1.83.0-0.fc40.x86_64                                             
  boost-log-1.83.0-0.fc40.x86_64                                                
  boost-math-1.83.0-0.fc40.x86_64                                               
  boost-nowide-1.83.0-0.fc40.x86_64                                             
  boost-numpy3-1.83.0-0.fc40.x86_64                                             
  boost-program-options-1.83.0-0.fc40.x86_64                                    
  boost-python3-1.83.0-0.fc40.x86_64                                            
  boost-random-1.83.0-0.fc40.x86_64                                             
  boost-regex-1.83.0-0.fc40.x86_64                                              
  boost-serialization-1.83.0-0.fc40.x86_64                                      
  boost-stacktrace-1.83.0-0.fc40.x86_64                                         
  boost-system-1.83.0-0.fc40.x86_64                                             
  boost-test-1.83.0-0.fc40.x86_64                                               
  boost-thread-1.83.0-0.fc40.x86_64                                             
  boost-timer-1.83.0-0.fc40.x86_64                                              
  boost-type_erasure-1.83.0-0.fc40.x86_64                                       
  boost-wave-1.83.0-0.fc40.x86_64                                               
  cairo-1.18.0-1.fc40.x86_64                                                    
  cairo-gobject-1.18.0-1.fc40.x86_64                                            
  chrpath-0.16-21.fc39.x86_64                                                   
  clang-libs-17.0.6-1.fc40.x86_64                                               
  clang-resource-filesystem-17.0.6-1.fc40.noarch                                
  cmake-3.27.7-1.fc40.x86_64                                                    
  cmake-data-3.27.7-1.fc40.noarch                                               
  cmake-filesystem-3.27.7-1.fc40.x86_64                                         
  cmake-rpm-macros-3.27.7-1.fc40.noarch                                         
  cpp-13.2.1-5.fc40.x86_64                                                      
  crypto-policies-scripts-20231113-1.gitb402e82.fc40.noarch                     
  cups-libs-1:2.4.7-3.fc40.x86_64                                               
  dbus-libs-1:1.14.10-1.fc40.x86_64                                             
  default-fonts-core-sans-4.0-9.fc40.noarch                                     
  double-conversion-3.1.5-9.fc39.x86_64                                         
  doxygen-2:1.9.8-1.fc40.x86_64                                                 
  duktape-2.7.0-5.fc39.x86_64                                                   
  eigen3-devel-3.4.0-12.fc39.noarch                                             
  emacs-filesystem-1:29.1-14.fc40.noarch                                        
  expat-2.5.0-3.fc39.x86_64                                                     
  flexiblas-3.3.1-5.fc39.x86_64                                                 
  flexiblas-netlib-3.3.1-5.fc39.x86_64                                          
  flexiblas-openblas-openmp-3.3.1-5.fc39.x86_64                                 
  fontconfig-2.14.2-5.fc40.x86_64                                               
  fonts-filesystem-1:2.0.5-12.fc39.noarch                                       
  freetype-2.13.1-2.fc39.x86_64                                                 
  fribidi-1.0.13-2.fc39.x86_64                                                  
  gc-8.2.2-4.fc39.x86_64                                                        
  gcc-13.2.1-5.fc40.x86_64                                                      
  gcc-c++-13.2.1-5.fc40.x86_64                                                  
  gcc-gfortran-13.2.1-5.fc40.x86_64                                             
  gcc-plugin-annobin-13.2.1-5.fc40.x86_64                                       
  gd-2.3.3-12.fc39.x86_64                                                       
  gdk-pixbuf2-2.42.10-5.fc39.x86_64                                             
  gl-manpages-1.1-29.20190306.fc40.noarch                                       
  glew-devel-2.2.0-5.fc39.x86_64                                                
  glib2-2.78.1-1.fc40.x86_64                                                    
  glibc-devel-2.38.9000-26.fc40.x86_64                                          
  glibc-headers-x86-2.38.9000-26.fc40.noarch                                    
  glx-utils-9.0.0-4.fc40.x86_64                                                 
  gnutls-3.8.2-2.fc40.x86_64                                                    
  google-droid-sans-fonts-20200215-17.fc40.noarch                               
  google-noto-fonts-common-20230801-4.fc40.noarch                               
  google-noto-sans-vf-fonts-20230801-4.fc40.noarch                              
  graphite2-1.3.14-13.fc40.x86_64                                               
  graphviz-9.0.0-3.fc40.x86_64                                                  
  groff-base-1.23.0-3.fc40.x86_64                                               
  gts-0.7.6-46.20121130.fc39.x86_64                                             
  guile22-2.2.7-9.fc39.x86_64                                                   
  harfbuzz-8.3.0-2.fc40.x86_64                                                  
  hdf5-1.12.1-15.fc40.x86_64                                                    
  hdf5-devel-1.12.1-15.fc40.x86_64                                              
  highway-1.0.7-1.fc40.x86_64                                                   
  hwdata-0.376-1.fc40.noarch                                                    
  inchi-libs-1.0.6-7.fc39.x86_64                                                
  jbig2dec-libs-0.20-1.fc40.x86_64                                              
  jbigkit-libs-2.1-27.fc40.x86_64                                               
  jsoncpp-1.9.5-5.fc39.x86_64                                                   
  jsoncpp-devel-1.9.5-5.fc39.x86_64                                             
  kernel-headers-6.7.0-0.rc3.git0.1.fc40.x86_64                                 
  lasi-1.1.3-11.fc39.x86_64                                                     
  lcms2-2.15-2.fc39.x86_64                                                      
  libGLEW-2.2.0-5.fc39.x86_64                                                   
  libICE-1.1.1-1.fc40.x86_64                                                    
  libSM-1.2.4-1.fc40.x86_64                                                     
  libX11-1.8.7-1.fc40.x86_64                                                    
  libX11-common-1.8.7-1.fc40.noarch                                             
  libX11-devel-1.8.7-1.fc40.x86_64                                              
  libX11-xcb-1.8.7-1.fc40.x86_64                                                
  libXau-1.0.11-4.fc40.x86_64                                                   
  libXau-devel-1.0.11-4.fc40.x86_64                                             
  libXext-1.3.5-4.fc40.x86_64                                                   
  libXfixes-6.0.1-1.fc40.x86_64                                                 
  libXft-2.3.8-4.fc40.x86_64                                                    
  libXpm-3.5.17-1.fc40.x86_64                                                   
  libXrender-0.9.11-4.fc40.x86_64                                               
  libXt-1.3.0-1.fc40.x86_64                                                     
  libXxf86vm-1.1.5-4.fc40.x86_64                                                
  libaec-1.0.6-5.fc39.x86_64                                                    
  libaec-devel-1.0.6-5.fc39.x86_64                                              
  libaom-3.7.1-1.fc40.x86_64                                                    
  libarchive-devel-3.7.2-1.fc40.x86_64                                          
  libavif-0.11.1-11.fc39.x86_64                                                 
  libb2-0.98.1-9.fc39.x86_64                                                    
  libdatrie-0.2.13-7.fc39.x86_64                                                
  libdav1d-1.2.1-2.fc39.x86_64                                                  
  libdrm-2.4.117-1.fc40.x86_64                                                  
  libedit-3.1-48.20230828cvs.fc40.x86_64                                        
  libevdev-1.13.1-2.fc39.x86_64                                                 
  libgfortran-13.2.1-5.fc40.x86_64                                              
  libglvnd-1:1.7.0-1.fc40.x86_64                                                
  libglvnd-core-devel-1:1.7.0-1.fc40.x86_64                                     
  libglvnd-devel-1:1.7.0-1.fc40.x86_64                                          
  libglvnd-egl-1:1.7.0-1.fc40.x86_64                                            
  libglvnd-gles-1:1.7.0-1.fc40.x86_64                                           
  libglvnd-glx-1:1.7.0-1.fc40.x86_64                                            
  libglvnd-opengl-1:1.7.0-1.fc40.x86_64                                         
  libgs-10.02.1-4.fc40.x86_64                                                   
  libgudev-238-2.fc39.x86_64                                                    
  libicu-73.2-2.fc39.x86_64                                                     
  libicu-devel-73.2-2.fc39.x86_64                                               
  libijs-0.35-19.fc39.x86_64                                                    
  libimagequant-4.0.3-1.fc40.x86_64                                             
  libinput-1.24.0-1.fc40.x86_64                                                 
  libjpeg-turbo-2.1.4-3.fc39.x86_64                                             
  libjxl-1:0.8.2-3.fc40.x86_64                                                  
  liblerc-4.0.0-4.fc39.x86_64                                                   
  libmpc-1.3.1-3.fc39.x86_64                                                    
  libpaper-1:2.1.1-1.fc39.x86_64                                                
  libpciaccess-0.16-9.fc39.x86_64                                               
  libpng-2:1.6.40-1.fc40.x86_64                                                 
  libproxy-0.5.3-3.fc40.x86_64                                                  
  libquadmath-13.2.1-5.fc40.x86_64                                              
  libquadmath-devel-13.2.1-5.fc40.x86_64                                        
  librsvg2-2.57.0-3.fc40.x86_64                                                 
  libstdc++-devel-13.2.1-5.fc40.x86_64                                          
  libthai-0.1.29-6.fc39.x86_64                                                  
  libtiff-4.5.0-3.fc40.x86_64                                                   
  libtool-ltdl-2.4.7-8.fc40.x86_64                                              
  libuv-1:1.47.0-3.fc40.x86_64                                                  
  libvmaf-2.3.0-6.fc39.x86_64                                                   
  libwacom-2.9.0-1.fc40.x86_64                                                  
  libwacom-data-2.9.0-1.fc40.noarch                                             
  libwayland-client-1.22.0-2.fc39.x86_64                                        
  libwayland-server-1.22.0-2.fc39.x86_64                                        
  libwebp-1.3.2-2.fc40.x86_64                                                   
  libxcb-1.16-2.fc40.x86_64                                                     
  libxcb-devel-1.16-2.fc40.x86_64                                               
  libxcrypt-devel-4.4.36-2.fc39.x86_64                                          
  libxkbcommon-1.6.0-1.fc40.x86_64                                              
  libxkbcommon-x11-1.6.0-1.fc40.x86_64                                          
  libxshmfence-1.3.2-1.fc40.x86_64                                              
  llvm-libs-17.0.6-1.fc40.x86_64                                                
  make-1:4.4.1-2.fc39.x86_64                                                    
  mesa-libEGL-23.3.0-1.fc40.x86_64                                              
  mesa-libEGL-devel-23.3.0-1.fc40.x86_64                                        
  mesa-libGL-23.3.0-1.fc40.x86_64                                               
  mesa-libGLU-9.0.3-1.fc39.x86_64                                               
  mesa-libGLU-devel-9.0.3-1.fc39.x86_64                                         
  mesa-libgbm-23.3.0-1.fc40.x86_64                                              
  mesa-libglapi-23.3.0-1.fc40.x86_64                                            
  mmtf-cpp-devel-1.1.0-3.fc39.x86_64                                            
  mpdecimal-2.5.1-7.fc39.x86_64                                                 
  msgpack-3.1.0-13.fc39.x86_64                                                  
  msgpack-devel-3.1.0-13.fc39.x86_64                                            
  mtdev-1.1.6-6.fc39.x86_64                                                     
  ncurses-6.4-8.20231001.fc40.x86_64                                            
  netpbm-11.02.00-3.fc40.x86_64                                                 
  nettle-3.9.1-2.fc39.x86_64                                                    
  nspr-4.35.0-16.fc40.x86_64                                                    
  nss-3.95.0-1.fc40.x86_64                                                      
  nss-softokn-3.95.0-1.fc40.x86_64                                              
  nss-softokn-freebl-3.95.0-1.fc40.x86_64                                       
  nss-sysinit-3.95.0-1.fc40.x86_64                                              
  nss-util-3.95.0-1.fc40.x86_64                                                 
  openbabel-devel-3.1.1-21.fc40.x86_64                                          
  openbabel-libs-3.1.1-21.fc40.x86_64                                           
  openblas-0.3.25-1.fc40.x86_64                                                 
  openblas-openmp-0.3.25-1.fc40.x86_64                                          
  openjpeg2-2.5.0-5.fc40.x86_64                                                 
  openssl-devel-1:3.1.4-1.fc40.x86_64                                           
  pango-1.51.0-1.fc40.x86_64                                                    
  pcre2-utf16-10.42-2.fc40.x86_64                                               
  perl-AutoLoader-5.74-503.fc40.noarch                                          
  perl-B-1.88-503.fc40.x86_64                                                   
  perl-Carp-1.54-500.fc39.noarch                                                
  perl-Class-Struct-0.68-503.fc40.noarch                                        
  perl-Data-Dumper-2.188-501.fc39.x86_64                                        
  perl-Digest-1.20-500.fc39.noarch                                              
  perl-Digest-MD5-2.58-501.fc40.x86_64                                          
  perl-DynaLoader-1.54-503.fc40.x86_64                                          
  perl-Encode-4:3.20-501.fc40.x86_64                                            
  perl-English-1.11-503.fc40.noarch                                             
  perl-Errno-1.37-503.fc40.x86_64                                               
  perl-Exporter-5.77-500.fc39.noarch                                            
  perl-Fcntl-1.15-503.fc40.x86_64                                               
  perl-File-Basename-2.86-503.fc40.noarch                                       
  perl-File-Find-1.43-503.fc40.noarch                                           
  perl-File-Path-2.18-501.fc40.noarch                                           
  perl-File-Temp-1:0.231.100-501.fc40.noarch                                    
  perl-File-stat-1.13-503.fc40.noarch                                           
  perl-FileHandle-2.05-503.fc40.noarch                                          
  perl-Getopt-Long-1:2.57-1.fc40.noarch                                         
  perl-Getopt-Std-1.13-503.fc40.noarch                                          
  perl-HTTP-Tiny-0.088-3.fc39.noarch                                            
  perl-IO-1.52-503.fc40.x86_64                                                  
  perl-IO-Socket-IP-0.42-1.fc39.noarch                                          
  perl-IO-Socket-SSL-2.084-1.fc40.noarch                                        
  perl-IPC-Open3-1.22-503.fc40.noarch                                           
  perl-MIME-Base64-3.16-501.fc40.x86_64                                         
  perl-Mozilla-CA-20230821-1.fc40.noarch                                        
  perl-Net-SSLeay-1.92-10.fc39.x86_64                                           
  perl-POSIX-2.13-503.fc40.x86_64                                               
  perl-PathTools-3.89-500.fc39.x86_64                                           
  perl-Pod-Escapes-1:1.07-501.fc40.noarch                                       
  perl-Pod-Perldoc-3.28.01-501.fc39.noarch                                      
  perl-Pod-Simple-1:3.45-4.fc39.noarch                                          
  perl-Pod-Usage-4:2.03-500.fc39.noarch                                         
  perl-Scalar-List-Utils-5:1.63-500.fc39.x86_64                                 
  perl-SelectSaver-1.02-503.fc40.noarch                                         
  perl-Socket-4:2.037-3.fc39.x86_64                                             
  perl-Storable-1:3.32-500.fc39.x86_64                                          
  perl-Symbol-1.09-503.fc40.noarch                                              
  perl-Term-ANSIColor-5.01-502.fc40.noarch                                      
  perl-Term-Cap-1.18-500.fc39.noarch                                            
  perl-Text-ParseWords-3.31-500.fc39.noarch                                     
  perl-Text-Tabs+Wrap-2023.0511-3.fc39.noarch                                   
  perl-Time-Local-2:1.350-3.fc39.noarch                                         
  perl-URI-5.21-1.fc40.noarch                                                   
  perl-base-2.27-503.fc40.noarch                                                
  perl-constant-1.33-501.fc39.noarch                                            
  perl-if-0.61.000-503.fc40.noarch                                              
  perl-interpreter-4:5.38.2-503.fc40.x86_64                                     
  perl-libnet-3.15-501.fc39.noarch                                              
  perl-libs-4:5.38.2-503.fc40.x86_64                                            
  perl-locale-1.10-503.fc40.noarch                                              
  perl-mro-1.28-503.fc40.x86_64                                                 
  perl-overload-1.37-503.fc40.noarch                                            
  perl-overloading-0.02-503.fc40.noarch                                         
  perl-parent-1:0.241-500.fc39.noarch                                           
  perl-podlators-1:5.01-500.fc39.noarch                                         
  perl-vars-1.05-503.fc40.noarch                                                
  pixman-0.42.2-2.fc39.x86_64                                                   
  poppler-23.08.0-1.fc40.x86_64                                                 
  poppler-data-0.4.11-5.fc39.noarch                                             
  poppler-glib-23.08.0-1.fc40.x86_64                                            
  pyproject-rpm-macros-1.10.0-1.fc40.noarch                                     
  python-pip-wheel-23.2.1-1.fc39.noarch                                         
  python-rpm-macros-3.12-4.fc40.noarch                                          
  python3-3.12.0-2.fc40.x86_64                                                  
  python3-devel-3.12.0-2.fc40.x86_64                                            
  python3-libs-3.12.0-2.fc40.x86_64                                             
  python3-numpy-1:1.26.0-2.fc40.x86_64                                          
  python3-packaging-23.2-2.fc40.noarch                                          
  python3-rpm-generators-14-8.fc40.noarch                                       
  python3-rpm-macros-3.12-4.fc40.noarch                                         
  qt-settings-39.0-2.fc40.noarch                                                
  qt5-designer-5.15.11-1.fc40.x86_64                                            
  qt5-doctools-5.15.11-1.fc40.x86_64                                            
  qt5-linguist-5.15.11-1.fc40.x86_64                                            
  qt5-qtbase-5.15.11-7.fc40.x86_64                                              
  qt5-qtbase-common-5.15.11-7.fc40.noarch                                       
  qt5-qtbase-devel-5.15.11-7.fc40.x86_64                                        
  qt5-qtbase-gui-5.15.11-7.fc40.x86_64                                          
  qt5-qtdeclarative-5.15.11-2.fc40.x86_64                                       
  qt5-qtsvg-5.15.11-1.fc40.x86_64                                               
  qt5-qtsvg-devel-5.15.11-1.fc40.x86_64                                         
  qt5-qttools-5.15.11-1.fc40.x86_64                                             
  qt5-qttools-common-5.15.11-1.fc40.noarch                                      
  qt5-qttools-devel-5.15.11-1.fc40.x86_64                                       
  qt5-qttools-libs-designer-5.15.11-1.fc40.x86_64                               
  qt5-qttools-libs-designercomponents-5.15.11-1.fc40.x86_64                     
  qt5-qttools-libs-help-5.15.11-1.fc40.x86_64                                   
  qt5-rpm-macros-5.15.11-1.fc40.noarch                                          
  rav1e-libs-0.6.6-3.fc40.x86_64                                                
  rhash-1.4.3-3.fc39.x86_64                                                     
  rsvg-pixbuf-loader-2.57.0-3.fc40.x86_64                                       
  shared-mime-info-2.3-1.fc40.x86_64                                            
  spglib-2.0.2-3.fc39.x86_64                                                    
  spglib-devel-2.0.2-3.fc39.x86_64                                              
  svt-av1-libs-1.4.1-3.fc39.x86_64                                              
  tzdata-2023c-4.fc40.noarch                                                    
  urw-base35-bookman-fonts-20200910-18.fc39.noarch                              
  urw-base35-c059-fonts-20200910-18.fc39.noarch                                 
  urw-base35-d050000l-fonts-20200910-18.fc39.noarch                             
  urw-base35-fonts-20200910-18.fc39.noarch                                      
  urw-base35-fonts-common-20200910-18.fc39.noarch                               
  urw-base35-gothic-fonts-20200910-18.fc39.noarch                               
  urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch                       
  urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch                         
  urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch                          
  urw-base35-p052-fonts-20200910-18.fc39.noarch                                 
  urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch                  
  urw-base35-z003-fonts-20200910-18.fc39.noarch                                 
  vim-filesystem-2:9.0.2120-1.fc40.noarch                                       
  vulkan-headers-1.3.268.0-1.fc40.noarch                                        
  vulkan-loader-1.3.268.0-1.fc40.x86_64                                         
  vulkan-loader-devel-1.3.268.0-1.fc40.x86_64                                   
  xapian-core-libs-1.4.23-1.fc39.x86_64                                         
  xcb-util-0.4.1-3.fc39.x86_64                                                  
  xcb-util-image-0.4.1-3.fc39.x86_64                                            
  xcb-util-keysyms-0.4.1-3.fc39.x86_64                                          
  xcb-util-renderutil-0.3.10-3.fc39.x86_64                                      
  xcb-util-wm-0.4.2-3.fc39.x86_64                                               
  xkeyboard-config-2.40-2.fc40.noarch                                           
  xml-common-0.6.3-62.fc40.noarch                                               
  xorg-x11-proto-devel-2023.2-3.fc40.noarch                                     
  zlib-devel-1.2.13-5.fc40.x86_64                                               

Complete!
Finish: build setup for avogadro2-libs-1.98.1-1.fc40.src.rpm
Start: rpmbuild avogadro2-libs-1.98.1-1.fc40.src.rpm
Building target platforms: x86_64
Building for target x86_64
setting SOURCE_DATE_EPOCH=1699056000
Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.l3Tvd5
+ umask 022
+ cd /builddir/build/BUILD
+ cd /builddir/build/BUILD
+ rm -rf avogadrolibs-1.98.1
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/avogadrolibs-1.98.1.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ cd avogadrolibs-1.98.1
+ rm -rf /builddir/build/BUILD/avogadrolibs-1.98.1-SPECPARTS
+ /usr/bin/mkdir -p /builddir/build/BUILD/avogadrolibs-1.98.1-SPECPARTS
+ /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/avogenerators-1.98.0.tar.gz
+ STATUS=0
+ '[' 0 -ne 0 ']'
+ /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w .
+ tar -xf /builddir/build/SOURCES/molecules-1.98.0.tar.gz
+ mv molecules-1.98.0 molecules
+ tar -xf /builddir/build/SOURCES/crystals-1.98.0.tar.gz
+ mv crystals-1.98.0 crystals
+ mv molecules/LICENSE molecules/LICENSE-molecules
+ echo 'Patch #0 (avogadro2-libs-set_pythonpath.patch):'
Patch #0 (avogadro2-libs-set_pythonpath.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .backup --fuzz=0
patching file avogadro/qtplugins/quantuminput/CMakeLists.txt
Hunk #1 succeeded at 34 (offset -7 lines).
patching file avogadro/qtplugins/scriptfileformats/CMakeLists.txt
Hunk #1 succeeded at 20 (offset -4 lines).
+ echo 'Patch #1 (avogadro2-libs-1.94.0-do_not_download_external_files.patch):'
Patch #1 (avogadro2-libs-1.94.0-do_not_download_external_files.patch):
+ /usr/bin/patch --no-backup-if-mismatch -f -p0 -b --suffix .backup --fuzz=0
patching file avogadro/qtplugins/insertfragment/CMakeLists.txt
Hunk #1 succeeded at 11 (offset -2 lines).
+ mv avogenerators-1.98.0 avogadrogenerators
+ mv avogadrogenerators/README.md avogadrogenerators/README-avogenerators.md
+ sed -e 's|../avogadrogenerators|avogadrogenerators|g' -i avogadro/qtplugins/quantuminput/CMakeLists.txt
+ mv thirdparty/libgwavi/README.md thirdparty/libgwavi/README-libgwavi.md
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.C5OH8T
+ umask 022
+ cd /builddir/build/BUILD
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd avogadrolibs-1.98.1
+ mkdir -p build
+ export 'CXXFLAGS=-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API'
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API'
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API'
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ /usr/bin/cmake -S . -B redhat-linux-build -DCMAKE_C_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_CXX_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_Fortran_FLAGS_RELEASE:STRING=-DNDEBUG -DCMAKE_VERBOSE_MAKEFILE:BOOL=ON -DCMAKE_INSTALL_DO_STRIP:BOOL=OFF -DCMAKE_INSTALL_PREFIX:PATH=/usr -DINCLUDE_INSTALL_DIR:PATH=/usr/include -DLIB_INSTALL_DIR:PATH=/usr/lib64 -DSYSCONF_INSTALL_DIR:PATH=/etc -DSHARE_INSTALL_PREFIX:PATH=/usr/share -DLIB_SUFFIX=64 -DBUILD_SHARED_LIBS:BOOL=ON -B build -DCMAKE_BUILD_TYPE:STRING=Release -DINSTALL_INCLUDE_DIR:PATH=include/avogadro2 -DINSTALL_LIBRARY_DIR:PATH=lib64 -Wno-dev -DENABLE_GLSL:BOOL=ON -DENABLE_PYTHON:BOOL=ON -DPYTHON_EXECUTABLE:FILEPATH=/usr/bin/python3 -DPYTHON_VERSION:STRING=3.12 -DUSE_BOOST_PYTHON:BOOL=ON -DUSE_LIBARCHIVE:BOOL=ON -DENABLE_RPATH:BOOL=OFF -DENABLE_TESTING:BOOL=OFF -DUSE_MMTF:BOOL=ON -DUSE_QT:BOOL=ON -DUSE_MOLEQUEUE:BOOL=ON -DUSE_VTK:BOOL=OFF -DUSE_HDF5:BOOL=ON -DUSE_SPGLIB:BOOL=ON -DSPGLIB_LIBRARY:FILEPATH=/usr/lib64/libsymspg.so -DSPGLIB_INCLUDE_DIR:PATH=/usr/include/spglib -DBUILD_GPL_PLUGINS:BOOL=ON -DBUILD_STATIC_PLUGINS:BOOL=ON -DBUILD_DOCUMENTATION:BOOL=ON -DUSE_LIBMSYM:BOOL=OFF
-- The C compiler identification is GNU 13.2.1
-- The CXX compiler identification is GNU 13.2.1
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working C compiler: /usr/bin/gcc - skipped
-- Detecting C compile features
-- Detecting C compile features - done
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/g++ - skipped
-- Detecting CXX compile features
-- Detecting CXX compile features - done
-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE
-- Performing Test HAVE_GCC_ERROR_RETURN_TYPE - Success
-- Could NOT find Git (missing: GIT_EXECUTABLE) 
-- Could not use git to determine source version, using version 1.98.1
-- Found Eigen3: /usr/include/eigen3 (found version "3.4.0") 
-- Found SPGLIB: /usr/include/spglib  
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD
-- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Success
-- Found Threads: TRUE  
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_VISIBILITY - Success
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY
-- Performing Test COMPILER_HAS_HIDDEN_INLINE_VISIBILITY - Success
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR
-- Performing Test COMPILER_HAS_DEPRECATED_ATTR - Success
-- Found HDF5: /usr/lib64/libhdf5.so (found version "1.12.1") found components: C 
-- Found MMTF: /usr/include  
-- Found OpenGL: /usr/lib64/libOpenGL.so   
-- Found GLEW: /usr/include (found version "2.2.0") 
-- Found PythonInterp: /usr/bin/python3 (found suitable version "3.12", minimum required is "3") 
We have dalton.py;gamessuk.py;gaussian.py;molpro.py;mopac.py;nwchem.py;orca.py;psi4.py;pyscf.py;qchem.py;terachem.py
We have /builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/dalton.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/gamessuk.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/gaussian.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/molpro.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/mopac.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/nwchem.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/orca.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/psi4.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/pyscf.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/qchem.py;/builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/terachem.py
-- Found LibArchive: /usr/lib64/libarchive.so (found version "3.7.2") 
-- Found Doxygen: /usr/bin/doxygen (found version "1.9.8") found components: doxygen dot 
-- Configuring done (2.0s)
-- Generating done (0.2s)
CMake Warning:
  Manually-specified variables were not used by the project:

    CMAKE_Fortran_FLAGS_RELEASE
    CMAKE_INSTALL_DO_STRIP
    ENABLE_GLSL
    ENABLE_PYTHON
    INCLUDE_INSTALL_DIR
    LIB_INSTALL_DIR
    LIB_SUFFIX
    SHARE_INSTALL_PREFIX
    SYSCONF_INSTALL_DIR
    USE_BOOST_PYTHON
    USE_MOLEQUEUE


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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/atomutilities.cpp.o -MF CMakeFiles/Core.dir/atomutilities.cpp.o.d -o CMakeFiles/Core.dir/atomutilities.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomutilities.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[  3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -MF CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o.d -o CMakeFiles/Core.dir/coordinateblockgenerator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
In file included from /usr/include/eigen3/Eigen/Core:257,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:8:
In member function ‘Eigen::internal::mul_assign_op<double, double>::assignCoeff(double&, double const&) const’,
    inlined from ‘Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>::assignCoeff(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:654:26,
    inlined from ‘Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>::assignCoeffByOuterInner(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:668:16,
    inlined from ‘Eigen::internal::copy_using_evaluator_DefaultTraversal_CompleteUnrolling<Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>, 2, 3>::run(Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:211:35,
    inlined from ‘Eigen::internal::dense_assignment_loop<Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>, 3, 2>::run(Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:456:92,
    inlined from ‘Eigen::internal::call_dense_assignment_loop<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:785:37,
    inlined from ‘Eigen::internal::Assignment<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double>, Eigen::internal::Dense2Dense, void>::run(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31,
    inlined from ‘Eigen::internal::call_assignment_no_alias<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from ‘Eigen::internal::call_assignment<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&, Eigen::internal::enable_if<!Eigen::internal::evaluator_assume_aliasing<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator_traits<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::Shape>::value, void*>::type)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27,
    inlined from ‘Eigen::DenseBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::operator*=(double const&)’ at /usr/include/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h:20:28,
    inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:113:18:
/usr/include/eigen3/Eigen/src/Core/functors/AssignmentFunctors.h:92:102: warning: ‘MEM[(double &)&pos3d + 16]’ may be used uninitialized [-Wmaybe-uninitialized]
   92 |   EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(DstScalar& a, const SrcScalar& b) const { a *= b; }
      |                                                                                                    ~~^~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:70:11: note: ‘MEM[(double &)&pos3d + 16]’ was declared here
   70 |   Vector3 pos3d;
      |           ^~~~~
In file included from /usr/include/c++/13/istream:41,
                 from /usr/include/c++/13/sstream:40,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:6:
In member function ‘std::basic_ostream<char, std::char_traits<char> >::operator<<(double)’,
    inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:173:76:
/usr/include/c++/13/ostream:223:25: warning: ‘MEM[(Scalar &)&fpos3d]’ may be used uninitialized [-Wmaybe-uninitialized]
  223 |       { return _M_insert(__f); }
      |                ~~~~~~~~~^~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:71:11: note: ‘MEM[(Scalar &)&fpos3d]’ was declared here
   71 |   Vector3 fpos3d;
      |           ^~~~~~
In member function ‘std::basic_ostream<char, std::char_traits<char> >::operator<<(double)’,
    inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:181:76:
/usr/include/c++/13/ostream:223:25: warning: ‘MEM[(Scalar &)&fpos3d + 8]’ may be used uninitialized [-Wmaybe-uninitialized]
  223 |       { return _M_insert(__f); }
      |                ~~~~~~~~~^~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:71:11: note: ‘MEM[(Scalar &)&fpos3d + 8]’ was declared here
   71 |   Vector3 fpos3d;
      |           ^~~~~~
In member function ‘std::basic_ostream<char, std::char_traits<char> >::operator<<(double)’,
    inlined from ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:189:76:
/usr/include/c++/13/ostream:223:25: warning: ‘MEM[(Scalar &)&fpos3d + 16]’ may be used uninitialized [-Wmaybe-uninitialized]
  223 |       { return _M_insert(__f); }
      |                ~~~~~~~~~^~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp: In member function ‘Avogadro::Core::CoordinateBlockGenerator::generateCoordinateBlock[abi:cxx11]()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.cpp:71:11: note: ‘MEM[(Scalar &)&fpos3d + 16]’ was declared here
   71 |   Vector3 fpos3d;
      |           ^~~~~~
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[  3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/crystaltools.cpp.o -MF CMakeFiles/Core.dir/crystaltools.cpp.o.d -o CMakeFiles/Core.dir/crystaltools.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp
In file included from /usr/include/c++/13/vector:66,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:6:
In member function ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::resize(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::resize(unsigned long const&, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:177:19,
    inlined from ‘Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:676:16,
    inlined from ‘Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:666:6:
/usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
 1034 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72:
/usr/include/c++/13/bits/vector.tcc: In function ‘Avogadro::Core::CrystalTools::setFractionalCoordinates(Avogadro::Core::Molecule&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’:
/usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::_M_fill_insert(__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > > >, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ declared here
  529 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:676:16: note: ‘<anonymous>’ declared here
  676 |   output.resize(coords.size());
      |   ~~~~~~~~~~~~~^~~~~~~~~~~~~~~
In member function ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::resize(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::resize(unsigned long const&, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:177:19,
    inlined from ‘Avogadro::Core::CrystalTools::fractionalCoordinates(Avogadro::Core::Molecule const&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:647:16,
    inlined from ‘Avogadro::Core::CrystalTools::fractionalCoordinates(Avogadro::Core::Molecule const&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:640:6:
/usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
 1034 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/usr/include/c++/13/bits/vector.tcc: In function ‘Avogadro::Core::CrystalTools::fractionalCoordinates(Avogadro::Core::Molecule const&, Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)’:
/usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::_M_fill_insert(__gnu_cxx::__normal_iterator<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > > >, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ declared here
  529 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.cpp:647:16: note: ‘<anonymous>’ declared here
  647 |   coords.resize(molecule.atomCount());
      |   ~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[  3%] Building CXX object avogadro/core/CMakeFiles/Core.dir/cube.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/cube.cpp.o -MF CMakeFiles/Core.dir/cube.cpp.o.d -o CMakeFiles/Core.dir/cube.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/layermanager.cpp.o -MF CMakeFiles/Core.dir/layermanager.cpp.o.d -o CMakeFiles/Core.dir/layermanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/graph.cpp.o -MF CMakeFiles/Core.dir/graph.cpp.o.d -o CMakeFiles/Core.dir/graph.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp: In member function ‘Avogadro::Core::Graph::removeEdge(unsigned long, unsigned long)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:311:5: warning: ‘edgeIndex’ may be used uninitialized [-Wmaybe-uninitialized]
  311 |     if (m_edgeMap[b][i] == edgeIndex) {
      |     ^~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:299:10: note: ‘edgeIndex’ was declared here
  299 |   size_t edgeIndex;
      |          ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp: In member function ‘Avogadro::Core::Graph::swapEdgeIndices(unsigned long, unsigned long)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:421:17: warning: ‘MEM[(long unsigned int * &)&changeTo2]’ may be used uninitialized [-Wmaybe-uninitialized]
  421 |   *changeTo2[0] = edgeIndex2;
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:392:26: note: ‘MEM[(long unsigned int * &)&changeTo2]’ was declared here
  392 |   std::array<size_t*, 2> changeTo2;
      |                          ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:422:17: warning: ‘MEM[(long unsigned int * &)&changeTo2 + 8]’ may be used uninitialized [-Wmaybe-uninitialized]
  422 |   *changeTo2[1] = edgeIndex2;
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:392:26: note: ‘MEM[(long unsigned int * &)&changeTo2 + 8]’ was declared here
  392 |   std::array<size_t*, 2> changeTo2;
      |                          ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:423:17: warning: ‘MEM[(long unsigned int * &)&changeTo1]’ may be used uninitialized [-Wmaybe-uninitialized]
  423 |   *changeTo1[0] = edgeIndex1;
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:405:26: note: ‘MEM[(long unsigned int * &)&changeTo1]’ was declared here
  405 |   std::array<size_t*, 2> changeTo1;
      |                          ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:424:17: warning: ‘MEM[(long unsigned int * &)&changeTo1 + 8]’ may be used uninitialized [-Wmaybe-uninitialized]
  424 |   *changeTo1[1] = edgeIndex1;
      |   ~~~~~~~~~~~~~~^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/graph.cpp:405:26: note: ‘MEM[(long unsigned int * &)&changeTo1 + 8]’ was declared here
  405 |   std::array<size_t*, 2> changeTo1;
      |                          ^~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/mesh.cpp.o -MF CMakeFiles/Core.dir/mesh.cpp.o.d -o CMakeFiles/Core.dir/mesh.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.h:15,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<double, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::Core::Mesh::smooth(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp:189:46:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.195630].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp: In member function ‘Avogadro::Core::Mesh::smooth(int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/mesh.cpp:189:46: note: ‘<anonymous>’ declared here
  189 |   Array<Vector3> planarList(m_vertices.size());
      |                                              ^
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[  4%] Building CXX object avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core && /usr/bin/g++ -DCore_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/spglib -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/core/CMakeFiles/Core.dir/molecule.cpp.o -MF CMakeFiles/Core.dir/molecule.cpp.o.d -o CMakeFiles/Core.dir/molecule.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h: In copy constructor ‘Avogadro::Core::Molecule::Molecule(const Avogadro::Core::Molecule&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:793:24: warning: ‘Avogadro::Core::Molecule::m_atomicNumbers’ will be initialized after [-Wreorder]
  793 |   Array<unsigned char> m_atomicNumbers;
      |                        ^~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786:19: warning:   ‘Eigen::VectorXd Avogadro::Core::Molecule::m_frozenAtomMask’ [-Wreorder]
  786 |   Eigen::VectorXd m_frozenAtomMask;
      |                   ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:35:1: warning:   when initialized here [-Wreorder]
   35 | Molecule::Molecule(const Molecule& other)
      | ^~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h: In constructor ‘Avogadro::Core::Molecule::Molecule(Avogadro::Core::Molecule&&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:793:24: warning: ‘Avogadro::Core::Molecule::m_atomicNumbers’ will be initialized after [-Wreorder]
  793 |   Array<unsigned char> m_atomicNumbers;
      |                        ^~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786:19: warning:   ‘Eigen::VectorXd Avogadro::Core::Molecule::m_frozenAtomMask’ [-Wreorder]
  786 |   Eigen::VectorXd m_frozenAtomMask;
      |                   ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:77:1: warning:   when initialized here [-Wreorder]
   77 | Molecule::Molecule(Molecule&& other) noexcept
      | ^~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp: In member function ‘void Avogadro::Core::Molecule::setFrozenAtom(Avogadro::Index, bool)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:281:31: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  281 |   if (m_frozenAtomMask.rows() != 3*m_atomicNumbers.size())
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:290:18: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare]
  290 |   if (atomId * 3 <= m_frozenAtomMask.rows() - 3) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp: In member function ‘bool Avogadro::Core::Molecule::frozenAtom(Avogadro::Index) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:300:18: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare]
  300 |   if (atomId * 3 <= m_frozenAtomMask.rows() - 3) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp: In member function ‘void Avogadro::Core::Molecule::setFrozenAtomAxis(Avogadro::Index, int, bool)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:312:31: warning: comparison of integer expressions of different signedness: ‘Eigen::Index’ {aka ‘long int’} and ‘std::size_t’ {aka ‘long unsigned int’} [-Wsign-compare]
  312 |   if (m_frozenAtomMask.rows() != 3*m_atomicNumbers.size())
      |       ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.cpp:321:18: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::Index’ {aka ‘long int’} [-Wsign-compare]
  321 |   if (atomId * 3 <= m_frozenAtomMask.rows() - 3) {
      |       ~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp: In function ‘__static_initialization_and_destruction_0()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.cpp:162:1: note: variable tracking size limit exceeded with ‘-fvar-tracking-assignments’, retrying without
  162 | } // namespace Avogadro
      | ^
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  162 | } // namespace Avogadro
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In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h: In constructor ‘Avogadro::Calc::LennardJones::LennardJones()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:56:7: warning: ‘Avogadro::Calc::LennardJones::m_exponent’ will be initialized after [-Wreorder]
   56 |   int m_exponent;
      |       ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:52:19: warning:   ‘Avogadro::Core::UnitCell* Avogadro::Calc::LennardJones::m_cell’ [-Wreorder]
   52 |   Core::UnitCell* m_cell;
      |                   ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:14:1: warning:   when initialized here [-Wreorder]
   14 | LennardJones::LennardJones()
      | ^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:52:19: warning: ‘Avogadro::Calc::LennardJones::m_cell’ will be initialized after [-Wreorder]
   52 |   Core::UnitCell* m_cell;
      |                   ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:51:19: warning:   ‘Avogadro::Core::Molecule* Avogadro::Calc::LennardJones::m_molecule’ [-Wreorder]
   51 |   Core::Molecule* m_molecule;
      |                   ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:14:1: warning:   when initialized here [-Wreorder]
   14 | LennardJones::LennardJones()
      | ^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp: In member function ‘virtual void Avogadro::Calc::LennardJones::setMolecule(Avogadro::Core::Molecule*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:46:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   46 |   for (Index i = 0; i < numAtoms; ++i) {
      |                     ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:55:29: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   55 |     for (Index j = i + 1; j < numAtoms; ++j) {
      |                           ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp: In member function ‘virtual Avogadro::Real Avogadro::Calc::LennardJones::value(const Eigen::VectorXd&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:84:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   84 |     for (Index i = 0; i < numAtoms; ++i) {
      |                       ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:86:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   86 |       for (Index j = i + 1; j < numAtoms; ++j) {
      |                             ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:98:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   98 |     for (Index i = 0; i < numAtoms; ++i) {
      |                       ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:100:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  100 |       for (Index j = i + 1; j < numAtoms; ++j) {
      |                             ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp: In member function ‘virtual void Avogadro::Calc::LennardJones::gradient(const Eigen::VectorXd&, Eigen::VectorXd&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:128:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  128 |     for (Index i = 0; i < numAtoms; ++i) {
      |                       ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:130:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  130 |       for (Index j = i + 1; j < numAtoms; ++j) {
      |                             ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:154:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  154 |     for (Index i = 0; i < numAtoms; ++i) {
      |                       ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.cpp:156:31: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  156 |       for (Index j = i + 1; j < numAtoms; ++j) {
      |                             ~~^~~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/sphere_ao_bake_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/sphere_ao_bake_vs.h sphere_ao_bake_vs
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheres_vs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/spheres_vs.h spheres_vs
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && ../../bin/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase_fs.glsl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/textlabelbase_fs.h textlabelbase_fs
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arcsector.cpp.o -MF CMakeFiles/Rendering.dir/arcsector.cpp.o.d -o CMakeFiles/Rendering.dir/arcsector.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::Rendering::ArcSector::setArcSector(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, float, float)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp:28:33:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.203875].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp: In member function ‘Avogadro::Rendering::ArcSector::setArcSector(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, float, float)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.cpp:28:33: note: ‘<anonymous>’ declared here
   28 |   Array<Vector3f> verts(numVerts);
      |                                 ^
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[  8%] Building CXX object avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/cmlformat.cpp.o -MF CMakeFiles/IO.dir/cmlformat.cpp.o.d -o CMakeFiles/IO.dir/cmlformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/cmlformat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 13%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/arcstrip.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/arcstrip.cpp.o -MF CMakeFiles/Rendering.dir/arcstrip.cpp.o.d -o CMakeFiles/Rendering.dir/arcstrip.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::Rendering::ArcStrip::setArc(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, float, float, float)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp:23:39:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.205283].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp: In member function ‘Avogadro::Rendering::ArcStrip::setArc(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, float, float, float)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.cpp:23:39: note: ‘<anonymous>’ declared here
   23 |   Core::Array<Vector3f> verts(numVerts);
      |                                       ^
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/cartoongeometry.cpp.o -MF CMakeFiles/Rendering.dir/cartoongeometry.cpp.o.d -o CMakeFiles/Rendering.dir/cartoongeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:46:21:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&vert1].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:43:23: note: ‘vert1’ declared here
   43 |     ColorNormalVertex vert1;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:46:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:43:23: note: ‘vert1’ declared here
   43 |     ColorNormalVertex vert1;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:46:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].padding’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:43:23: note: ‘vert1’ declared here
   43 |     ColorNormalVertex vert1;
      |                       ^~~~~
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8,
    inlined from ‘std::__new_allocator<Avogmake[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
adro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:51:21:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&vert2].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:48:23: note: ‘vert2’ declared here
   48 |     ColorNormalVertex vert2;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:51:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:48:23: note: ‘vert2’ declared here
   48 |     ColorNormalVertex vert2;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:51:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].padding’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp: In member function ‘Avogadro::Rendering::Cartoon::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.cpp:48:23: note: ‘vert2’ declared here
   48 |     ColorNormalVertex vert2;
      |                       ^~~~~
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 15%] Building CXX object avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/gromacsformat.cpp.o -MF CMakeFiles/IO.dir/gromacsformat.cpp.o.d -o CMakeFiles/IO.dir/gromacsformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/gromacsformat.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/mdlformat.cpp.o -MF CMakeFiles/IO.dir/mdlformat.cpp.o.d -o CMakeFiles/IO.dir/mdlformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/mdlformat.cpp
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[ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/camera.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/camera.cpp.o -MF CMakeFiles/Rendering.dir/camera.cpp.o.d -o CMakeFiles/Rendering.dir/camera.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.cpp
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[ 15%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/curvegeometry.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/curvegeometry.cpp.o -MF CMakeFiles/Rendering.dir/curvegeometry.cpp.o.d -o CMakeFiles/Rendering.dir/curvegeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:6:
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:63:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:59:23: note: ‘vert1’ declared here
   59 |     ColorNormalVertex vert1;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:63:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert1].padding’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:59:23: note: ‘vert1’ declared here
   59 |     ColorNormalVertex vert1;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:69:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:65:23: note: ‘vert2’ declared here
   65 |     ColorNormalVertex vert2;
      |                       ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:69:21:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].padding’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cumake[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
rvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::computeCirclePoints(Eigen::Transform<float, 3, 2, 0> const&, Eigen::Transform<float, 3, 2, 0> const&, bool) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:65:23: note: ‘vert2’ declared here
   65 |     ColorNormalVertex vert2;
      |                       ^~~~~
In file included from /usr/include/eigen3/Eigen/Core:253,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:12:
In member function ‘Eigen::internal::scalar_difference_op<float, float>::operator()(float const&, float const&) const’,
    inlined from ‘Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, float, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22,
    inlined from ‘Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const>, Eigen::internal::IndexBased, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:583:40,
    inlined from ‘Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 0, 1>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 0, 3>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:110:78,
    inlined from ‘Eigen::internal::redux_impl<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 3, 2>::run<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&, Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> const&)float’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:350:65,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::redux<Eigen::internal::scalar_sum_op<float, float> >(Eigen::internal::scalar_sum_op<float, float> const&) constfloat’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25,
    inlined from ‘Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> >::squaredNorm() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:98:46,
    inlined from ‘Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> >::normalized() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:128:31,
    inlined from ‘Avogadro::Rendering::CurveGeometry::update(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:97:45:
/usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:359:130: warning: ‘MEM[(float &)&previous]’ may be used uninitialized [-Wmaybe-uninitialized]
  359 |   EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; }
      |                                                                                                                                  ^
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::update(int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:87:12: note: ‘MEM[(float &)&previous]’ was declared here
   87 |   Vector3f previous;
      |            ^~~~~~~~
In member function ‘Eigen::internal::scalar_difference_op<float, float>::operator()(float const&, float const&) const’,
    inlined from ‘Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, float, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22,
    inlined from ‘Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const>, Eigen::internal::IndexBased, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:583:40,
    inlined from ‘Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 1, 1>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 1, 2>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:110:78,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 0, 3>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:111:96,
    inlined from ‘Eigen::internal::redux_impl<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 3, 2>::run<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&, Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> const&)float’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:350:65,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::redux<Eigen::internal::scalar_sum_op<float, float> >(Eigen::internal::scalar_sum_op<float, float> const&) constfloat’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25,
    inlined from ‘Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> >::squaredNorm() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:98:46,
    inlined from ‘Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> >::normalized() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:128:31,
    inlined from ‘Avogadro::Rendering::CurveGeometry::update(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:97:45:
/usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:359:130: warning: ‘MEM[(float &)&previous + 4]’ may be used uninitialized [-Wmaybe-uninitialized]
  359 |   EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; }
      |                                                                                                                                  ^
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::update(int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:87:12: note: ‘MEM[(float &)&previous + 4]’ was declared here
   87 |   Vector3f previous;
      |            ^~~~~~~~
In member function ‘Eigen::internal::scalar_difference_op<float, float>::operator()(float const&, float const&) const’,
    inlined from ‘Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, float, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:769:22,
    inlined from ‘Eigen::internal::unary_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const>, Eigen::internal::IndexBased, float>::coeff(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:583:40,
    inlined from ‘Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::coeffByOuterInner(long, long) const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:381:23,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 2, 1>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:128:34,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 1, 2>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:111:96,
    inlined from ‘Eigen::internal::redux_novec_unroller<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 0, 3>::run(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:111:96,
    inlined from ‘Eigen::internal::redux_impl<Eigen::internal::scalar_sum_op<float, float>, Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >, 3, 2>::run<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >(Eigen::internal::redux_evaluator<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> > const&, Eigen::internal::scalar_sum_op<float, float> const&, Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> const&)float’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:350:65,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::redux<Eigen::internal::scalar_sum_op<float, float> >(Eigen::internal::scalar_sum_op<float, float> const&) constfloat’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseUnaryOp<Eigen::internal::scalar_abs2_op<float>, Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25,
    inlined from ‘Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> >::squaredNorm() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:98:46,
    inlined from ‘Eigen::MatrixBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_difference_op<float, float>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const, Eigen::Matrix<float, 3, 1, 0, 3, 1> const> >::normalized() const’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:128:31,
    inlined from ‘Avogadro::Rendering::CurveGeometry::update(int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:97:45:
/usr/include/eigen3/Eigen/src/Core/functors/BinaryFunctors.h:359:130: warning: ‘MEM[(float &)&previous + 8]’ may be used uninitialized [-Wmaybe-uninitialized]
  359 |   EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE const result_type operator() (const LhsScalar& a, const RhsScalar& b) const { return a - b; }
      |                                                                                                                                  ^
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp: In member function ‘Avogadro::Rendering::CurveGeometry::update(int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.cpp:87:12: note: ‘MEM[(float &)&previous + 8]’ was declared here
   87 |   Vector3f previous;
      |            ^~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/vaspformat.cpp.o -MF CMakeFiles/IO.dir/vaspformat.cpp.o.d -o CMakeFiles/IO.dir/vaspformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/vaspformat.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/pdbformat.cpp.o -MF CMakeFiles/IO.dir/pdbformat.cpp.o.d -o CMakeFiles/IO.dir/pdbformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/pdbformat.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/cylindergeometry.cpp.o -MF CMakeFiles/Rendering.dir/cylindergeometry.cpp.o.d -o CMakeFiles/Rendering.dir/cylindergeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp
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In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:9:
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:119:35:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:112:25: note: ‘vert’ declared here
  112 |       ColorNormalVertex vert(itCylinder->color, -direction, position1);
      |                         ^~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:119:35:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert].padding’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:112:25: note: ‘vert’ declared here
  112 |       ColorNormalVertex vert(itCylinder->color, -direction, position1);
      |                         ^~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:122:35:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:113:25: note: ‘vert2’ declared here
  113 |       ColorNormalVertex vert2(itCylinder->color2, -direction, position1);
      |                         ^~~~~
In member function ‘Avogadro::Rendering::ColorNormalVertex::ColorNormalVertex(Avogadro::Rendering::ColorNormalVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorNormalVertex>::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorNormalVertex> >::construct<Avogadro::Rendering::ColorNormalVertex, Avogadro::Rendering::ColorNormalVertex const&>(std::allocator<Avogadro::Rendering::ColorNormalVertex>&, Avogadro::Rendering::ColorNormalVertex*, Avogadro::Rendering::ColorNormalVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorNormalVertex, std::allocator<Avogadro::Rendering::ColorNormalVertex> >::push_back(Avogadro::Rendering::ColorNormalVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::CylinderGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:122:35:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:67:8: warning: ‘MEM[(const struct ColorNormalVertex &)&vert2].padding’ may be used uninitialized [-Wmaybe-uninitialized]
   67 | struct ColorNormalVertex
      |        ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp: In member function ‘Avogadro::Rendering::CylinderGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.cpp:113:25: note: ‘vert2’ declared here
  113 |       ColorNormalVertex vert2(itCylinder->color2, -direction, position1);
      |                         ^~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/plyvisitor.cpp.o -MF CMakeFiles/Rendering.dir/plyvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/plyvisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 18%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/povrayvisitor.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/povrayvisitor.cpp.o -MF CMakeFiles/Rendering.dir/povrayvisitor.cpp.o.d -o CMakeFiles/Rendering.dir/povrayvisitor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 18%] Building CXX object avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/lammpsformat.cpp.o -MF CMakeFiles/IO.dir/lammpsformat.cpp.o.d -o CMakeFiles/IO.dir/lammpsformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp: In member function ‘Avogadro::Io::LammpsTrajectoryFormat::read(std::basic_istream<char, std::char_traits<char> >&, Avogadro::Core::Molecule&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp:268:5: warning: ‘numAtoms2’ may be used uninitialized [-Wmaybe-uninitialized]
  268 |     if (numAtoms2 != numAtoms) {
      |     ^~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.cpp:231:10: note: ‘numAtoms2’ was declared here
  231 |   size_t numAtoms2;
      |          ^~~~~~~~~
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/quad.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/quad.cpp.o -MF CMakeFiles/Rendering.dir/quad.cpp.o.d -o CMakeFiles/Rendering.dir/quad.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::Rendering::Quad::setQuad(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp:20:26:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.206333].m_storage’ is used uninitialized [-Wuninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp: In member function ‘Avogadro::Rendering::Quad::setQuad(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.cpp:20:26: note: ‘<anonymous>’ declared here
   20 |   Array<Vector3f> verts(4);
      |                          ^
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 19%] Building CXX object avogadro/io/CMakeFiles/IO.dir/hdf5dataformat.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io && /usr/bin/g++ -DAVO_USE_HDF5 -DAVO_USE_MMTF -DH5_USE_110_API -DIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/struct -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/pugixml -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/io/CMakeFiles/IO.dir/hdf5dataformat.cpp.o -MF CMakeFiles/IO.dir/hdf5dataformat.cpp.o.d -o CMakeFiles/IO.dir/hdf5dataformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 19%] Building CXX object avogadro/rendering/CMakeFiles/Rendering.dir/quadoutline.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/quadoutline.cpp.o -MF CMakeFiles/Rendering.dir/quadoutline.cpp.o.d -o CMakeFiles/Rendering.dir/quadoutline.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::Rendering::QuadOutline::setQuad(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, float)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp:16:26:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.204992].m_storage’ is used uninitialized [-Wuninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp: In member function ‘Avogadro::Rendering::QuadOutline::setQuad(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, float)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.cpp:16:26: note: ‘<anonymous>’ declared here
   16 |   Array<Vector3f> verts(5);
      |                          ^
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering && /usr/bin/g++ -DRendering_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/rendering/CMakeFiles/Rendering.dir/spheregeometry.cpp.o -MF CMakeFiles/Rendering.dir/spheregeometry.cpp.o.d -o CMakeFiles/Rendering.dir/spheregeometry.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:9:
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:94:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here
   92 |       ColorTextureVertex vert(itSphere->center, itSphere->color,
      |                          ^~~~
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:96:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here
   92 |       ColorTextureVertex vert(itSphere->center, itSphere->color,
      |                          ^~~~
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:98:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here
   92 |       ColorTextureVertex vert(itSphere->center, itSphere->color,
      |                          ^~~~
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::SphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:100:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp: In member function ‘Avogadro::Rendering::SphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.cpp:92:26: note: ‘vert’ declared here
   92 |       ColorTextureVertex vert(itSphere->center, itSphere->color,
      |                          ^~~~
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In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:9:
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1156:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here
 1150 |       ColorTextureVertex vert(
      |                          ^~~~
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1158:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here
 1150 |       ColorTextureVertex vert(
      |                          ^~~~
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1160:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here
 1150 |       ColorTextureVertex vert(
      |                          ^~~~
In member function ‘Avogadro::Rendering::ColorTextureVertex::ColorTextureVertex(Avogadro::Rendering::ColorTextureVertex const&)’,
    inlined from ‘std::__new_allocator<Avogadro::Rendering::ColorTextureVertex>::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::Rendering::ColorTextureVertex> >::construct<Avogadro::Rendering::ColorTextureVertex, Avogadro::Rendering::ColorTextureVertex const&>(std::allocator<Avogadro::Rendering::ColorTextureVertex>&, Avogadro::Rendering::ColorTextureVertex*, Avogadro::Rendering::ColorTextureVertex const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::Rendering::ColorTextureVertex, std::allocator<Avogadro::Rendering::ColorTextureVertex> >::push_back(Avogadro::Rendering::ColorTextureVertex const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1154:31:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:40:8: warning: ‘MEM[(const struct ColorTextureVertex &)&vert].unusedAlign’ may be used uninitialized [-Wmaybe-uninitialized]
   40 | struct ColorTextureVertex
      |        ^~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp: In member function ‘Avogadro::Rendering::AmbientOcclusionSphereGeometry::update()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.cpp:1150:26: note: ‘vert’ declared here
 1150 |       ColorTextureVertex vert(
      |                          ^~~~
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/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp: In member function ‘void Avogadro::QuantumIO::GaussianFchk::processLine(std::istream&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:194:32: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  194 |     for (unsigned int i = 0; i < m_normalModes; ++i) {
      |                              ~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:211:23: warning: comparison of integer expressions of different signedness: ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  211 |     if (tmpVec.size() == m_numAtoms * 3 * m_normalModes) {
      |         ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:212:34: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  212 |       for (unsigned int i = 0; i < m_normalModes; ++i) {
      |                                ~~^~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.cpp:214:36: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
  214 |         for (unsigned int j = 0; j < m_numAtoms; ++j) {
      |                                  ~~^~~~~~~~~~~~
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/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
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/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/backgroundfileformat.h
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/colorbutton.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_backgroundfileformat.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/containerwidget.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_colorbutton.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/customelementdialog.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_containerwidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/elementtranslator.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementtranslator.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_elementtranslator.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/extensionplugin.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_customelementdialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/filebrowsewidget.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_extensionplugin.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/fileformatdialog.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_filebrowsewidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/generichighlighter.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_fileformatdialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/interfacescript.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_generichighlighter.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/interfacewidget.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacescript.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/jsonwidget.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_interfacewidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/layermodel.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_jsonwidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/meshgenerator.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_layermodel.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/molecule.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_meshgenerator.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/moleculemodel.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_moleculemodel.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/multiviewwidget.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_molecule.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/periodictablescene_p.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_multiviewwidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/periodictableview.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictablescene_p.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/pythonscript.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_periodictableview.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/rwmolecule.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_pythonscript.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/sceneplugin.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_sceneplugin.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/scenepluginmodel.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scenepluginmodel.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/scriptloader.h"
/usr/lib64/qt5/bin/moc "-DAvogadroLibs_DATA_DIR=\"share\"" "-DAvogadroLibs_LIB_DIR=\"lib64\"" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_scriptloader.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_rwmolecule.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtgui/QtGui_autogen/EWIEGA46WW/moc_toolplugin.cpp", because it doesn't exist, from "SRC:/avogadro/qtgui/toolplugin.h"
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o -MF CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o.d -o CMakeFiles/QuantumIO.dir/nwchemjson.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp
In file included from /usr/include/eigen3/Eigen/Core:257,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/matrix.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:13,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp:8:
In member function ‘Eigen::internal::mul_assign_op<double, double>::assignCoeff(double&, double const&) const’,
    inlined from ‘Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>::assignCoeff(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:654:26,
    inlined from ‘Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>::assignCoeffByOuterInner(long, long)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:668:16,
    inlined from ‘Eigen::internal::copy_using_evaluator_DefaultTraversal_CompleteUnrolling<Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>, 2, 3>::run(Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:211:35,
    inlined from ‘Eigen::internal::dense_assignment_loop<Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>, 3, 2>::run(Eigen::internal::generic_dense_assignment_kernel<Eigen::internal::evaluator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >, Eigen::internal::mul_assign_op<double, double>, 0>&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:456:92,
    inlined from ‘Eigen::internal::call_dense_assignment_loop<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:785:37,
    inlined from ‘Eigen::internal::Assignment<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double>, Eigen::internal::Dense2Dense, void>::run(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&)’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:954:31,
    inlined from ‘Eigen::internal::call_assignment_no_alias<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:890:49,
    inlined from ‘Eigen::internal::call_assignment<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::mul_assign_op<double, double> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>&, Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::internal::mul_assign_op<double, double> const&, Eigen::internal::enable_if<!Eigen::internal::evaluator_assume_aliasing<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >, Eigen::internal::evaluator_traits<Eigen::CwiseNullaryOp<Eigen::internal::scalar_constant_op<double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::Shape>::value, void*>::type)void’ at /usr/include/eigen3/Eigen/src/Core/AssignEvaluator.h:858:27,
    inlined from ‘Eigen::DenseBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::operator*=(double const&)’ at /usr/include/eigen3/Eigen/src/Core/SelfCwiseBinaryOp.h:20:28,
    inlined from ‘Avogadro::QuantumIO::NWChemJson::read(std::basic_istream<char, std::char_traits<char> >&, Avogadro::Core::Molecule&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp:138:21:
/usr/include/eigen3/Eigen/src/Core/functors/AssignmentFunctors.h:92:102: warning: ‘MEM <double> [(struct DenseStorage *)&position + 16B]’ may be used uninitialized [-Wmaybe-uninitialized]
   92 |   EIGEN_DEVICE_FUNC EIGEN_STRONG_INLINE void assignCoeff(DstScalar& a, const SrcScalar& b) const { a *= b; }
      |                                                                                                    ~~^~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp: In member function ‘Avogadro::QuantumIO::NWChemJson::read(std::basic_istream<char, std::char_traits<char> >&, Avogadro::Core::Molecule&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.cpp:133:15: note: ‘MEM <double> [(struct DenseStorage *)&position + 16B]’ was declared here
  133 |       Vector3 position;
      |               ^~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio && /usr/bin/g++ -DQuantumIO_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -MD -MT avogadro/quantumio/CMakeFiles/QuantumIO.dir/orca.cpp.o -MF CMakeFiles/QuantumIO.dir/orca.cpp.o.d -o CMakeFiles/QuantumIO.dir/orca.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp: In member function ‘void Avogadro::QuantumIO::ORCAOutput::processLine(std::istream&, Avogadro::Core::GaussianSet*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:651:22: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  651 |           while (idx < orcaOrbitals.size()) {
      |                  ~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:654:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  654 |                 if (idx + 1 >= columns[i].size())
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:660:29: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  660 |                 if (idx + 1 >= columns[i].size())
      |                     ~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:730:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<std::__cxx11::basic_string<char> >::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  730 |             while (idx < orcaOrbitals.size()) {
      |                    ~~~~^~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:733:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  733 |                   if (idx + 1 >= columns[i].size())
      |                       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:739:31: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<double>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
  739 |                   if (idx + 1 >= columns[i].size())
      |                       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:118:9: warning: variable ‘vibScaling’ set but not used [-Wunused-but-set-variable]
  118 |   float vibScaling = 1.0f;
      |         ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:398:39: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
  398 |           m_vibDisplacements[i].resize(m_atomNums.size());
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:174:8: note: by argument 3 of type ‘const struct ValueType &’ to ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::resize(unsigned long const&, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ declared here
  174 |   void resize(const size_t& sz, const ValueType& t = ValueType())
      |        ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:398:39: note: ‘<anonymous>’ declared here
  398 |           m_vibDisplacements[i].resize(m_atomNums.size());
      |           ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:400:44: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
  400 |             m_vibDisplacements[i].push_back(Eigen::Vector3d());
      |             ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:247:8: note: by argument 2 of type ‘const struct ValueType &’ to ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::push_back(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ declared here
  247 |   void push_back(const ValueType& v)
      |        ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.cpp:400:61: note: ‘<anonymous>’ declared here
  400 |             m_vibDisplacements[i].push_back(Eigen::Vector3d());
      |                                                             ^
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o -MF CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o.d -o CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -MF CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o.d -o CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/qrc_qtgui.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/g++ -DAvogadroLibs_DATA_DIR=\"share\" -DAvogadroLibs_LIB_DIR=\"lib64\" -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtGui_EXPORTS -DUSE_SPGLIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/QtGui_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtgui/CMakeFiles/QtGui.dir/viewfactory.cpp.o -MF CMakeFiles/QtGui.dir/viewfactory.cpp.o.d -o CMakeFiles/QtGui.dir/viewfactory.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/viewfactory.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtGui.dir/link.txt --verbose=1
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroQtGui.so.1 -o ../../lib/libAvogadroQtGui.so.1.98.1 CMakeFiles/QtGui.dir/QtGui_autogen/mocs_compilation.cpp.o CMakeFiles/QtGui.dir/backgroundfileformat.cpp.o CMakeFiles/QtGui.dir/colorbutton.cpp.o CMakeFiles/QtGui.dir/containerwidget.cpp.o CMakeFiles/QtGui.dir/customelementdialog.cpp.o CMakeFiles/QtGui.dir/elementdetail_p.cpp.o CMakeFiles/QtGui.dir/elementitem_p.cpp.o CMakeFiles/QtGui.dir/elementtranslator.cpp.o CMakeFiles/QtGui.dir/extensionplugin.cpp.o CMakeFiles/QtGui.dir/filebrowsewidget.cpp.o CMakeFiles/QtGui.dir/fileformatdialog.cpp.o CMakeFiles/QtGui.dir/generichighlighter.cpp.o CMakeFiles/QtGui.dir/hydrogentools.cpp.o CMakeFiles/QtGui.dir/interfacescript.cpp.o CMakeFiles/QtGui.dir/interfacewidget.cpp.o CMakeFiles/QtGui.dir/jsonwidget.cpp.o CMakeFiles/QtGui.dir/layermodel.cpp.o CMakeFiles/QtGui.dir/rwlayermanager.cpp.o CMakeFiles/QtGui.dir/meshgenerator.cpp.o CMakeFiles/QtGui.dir/molecule.cpp.o CMakeFiles/QtGui.dir/moleculemodel.cpp.o CMakeFiles/QtGui.dir/multiviewwidget.cpp.o CMakeFiles/QtGui.dir/periodictablescene_p.cpp.o CMakeFiles/QtGui.dir/periodictableview.cpp.o CMakeFiles/QtGui.dir/pluginlayermanager.cpp.o CMakeFiles/QtGui.dir/pythonscript.cpp.o CMakeFiles/QtGui.dir/rwmolecule.cpp.o CMakeFiles/QtGui.dir/sceneplugin.cpp.o CMakeFiles/QtGui.dir/scenepluginmodel.cpp.o CMakeFiles/QtGui.dir/scriptloader.cpp.o CMakeFiles/QtGui.dir/toolplugin.cpp.o CMakeFiles/QtGui.dir/utilities.cpp.o CMakeFiles/QtGui.dir/viewfactory.cpp.o CMakeFiles/QtGui.dir/qrc_qtgui.cpp.o  -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroQtGui.so.1 ../../lib/libAvogadroQtGui.so
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/DependInfo.cmake "--color="
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[ 33%] Automatic MOC for target QtOpenGL
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtopengl/activeobjects.h"
AutoGen: Parsing "SRC:/avogadro/qtopengl/glwidget.h"
AutoGen: Parsing "SRC:/avogadro/qtopengl/qttextrenderstrategy.h"
AutoGen: Parsing "SRC:/build/avogadro/qtopengl/avogadroqtopenglexport.h"
AutoGen: Parsing "SRC:/avogadro/qtopengl/activeobjects.cpp"
AutoGen: Parsing "SRC:/avogadro/qtopengl/glwidget.cpp"
AutoGen: Parsing "SRC:/avogadro/qtopengl/qttextrenderstrategy.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp", because it doesn't exist, from "SRC:/avogadro/qtopengl/activeobjects.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.h
AutoMoc: Generating "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtopengl/glwidget.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_activeobjects.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/EWIEGA46WW/moc_glwidget.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtopengl/QtOpenGL_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 33%] Built target QtOpenGL_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 33%] Automatic MOC for target QTAIMScenePlugin
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimengine.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimengine.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/EWIEGA46WW/moc_qtaimengine.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/qtaim/qtaimengine.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/EWIEGA46WW/moc_qtaimengine.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimengine.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include/QTAIMScenePluginPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include/QTAIMScenePluginPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMScenePluginPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/EWIEGA46WW/moc_qtaimengine.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/include/QTAIMScenePluginPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/qtaim/QTAIMScenePlugin_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 33%] Built target QTAIMScenePlugin_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 33%] Automatic MOC for target MoleQueue
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/molequeue/batchjob.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/client/client.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/client/jobobject.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/client/jsonrpcclient.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/inputgenerator.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratordialog.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratorwidget.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuedialog.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuemanager.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuequeuelistmodel.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuewidget.h"
AutoGen: Parsing "SRC:/build/avogadro/molequeue/avogadromolequeueexport.h"
AutoGen: Parsing "SRC:/avogadro/molequeue/batchjob.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/client/client.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/client/jobobject.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/client/jsonrpcclient.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/inputgenerator.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratordialog.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/inputgeneratorwidget.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuedialog.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuemanager.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuequeuelistmodel.cpp"
AutoGen: Parsing "SRC:/avogadro/molequeue/molequeuewidget.cpp"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/batchjob.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/client/client.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_client.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/client/jsonrpcclient.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_batchjob.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgenerator.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/7EM65HM6UG/moc_jsonrpcclient.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgeneratordialog.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgenerator.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/inputgeneratorwidget.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratorwidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuedialog.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_inputgeneratordialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuemanager.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuedialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuequeuelistmodel.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuemanager.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp", because it doesn't exist, from "SRC:/avogadro/molequeue/molequeuewidget.h"
/usr/lib64/qt5/bin/moc -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuequeuelistmodel.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/molequeue/MoleQueue_autogen/EWIEGA46WW/moc_molequeuewidget.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/molequeue/MoleQueue_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 33%] Built target MoleQueue_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 33%] Automatic MOC for target ThreeDMol
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmol.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmol.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/3dmol/3dmol.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmol.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/3dmol/3dmoldialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmoldialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmol.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/EWIEGA46WW/moc_3dmoldialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include/ThreeDMolPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target ThreeDMol_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target ApplyColors
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/applycolors/applycolors.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/applycolors/applycolors.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/applycolors/applycolors.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors/applycolors.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/EWIEGA46WW/moc_applycolors.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include/ApplyColorsPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target ApplyColors_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Bonding
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/bonding/bonding.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/bonding/bonding.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/bonding/BondingPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/bonding/bonding.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding/bonding.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/bonding/BondingPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/BondingPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/include/BondingPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/EWIEGA46WW/moc_bonding.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/bonding/Bonding_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Bonding_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Cartoons
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/cartoons/cartoons.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/cartoons/cartoons.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cartoons/cartoons.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons/cartoons.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/EWIEGA46WW/moc_cartoons.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include/CartoonsPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/cartoons/Cartoons_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Cartoons_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Centroid
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/centroid/centroid.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/centroid/centroid.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/centroid/centroid.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid/centroid.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/EWIEGA46WW/moc_centroid.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/include/CentroidPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/centroid/Centroid_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Centroid_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target CopyPaste
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/copypaste/copypaste.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/copypaste/copypaste.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/copypaste/copypaste.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste/copypaste.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include/CopyPastePlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/EWIEGA46WW/moc_copypaste.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target CopyPaste_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target CrystalScene
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystalscene.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystalscene.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/crystalscene.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScenePlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include/CrystalScenePlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/EWIEGA46WW/moc_crystalscene.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target CrystalScene_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Crystal
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystal.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/supercelldialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/unitcelldialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/crystal.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/supercelldialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/unitcelldialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/crystal.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystal.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/importcrystaldialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/importcrystaldialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_crystal.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/supercelldialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/supercelldialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_importcrystaldialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/unitcelldialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/unitcelldialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_supercelldialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/crystal/volumescalingdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/volumescalingdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_unitcelldialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/EWIEGA46WW/moc_volumescalingdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/include/CrystalPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/crystal/Crystal_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Crystal_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target CustomElements
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/customelements/customelements.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/customelements/customelements.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/customelements/customelements.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements/customelements.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CustomElementsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/EWIEGA46WW/moc_customelements.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/include/CustomElementsPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/customelements/CustomElements_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target CustomElements_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target FetchPDB
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/fetchpdb/fetchpdb.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb/fetchpdb.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/EWIEGA46WW/moc_fetchpdb.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include/FetchPDBPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target FetchPDB_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Hydrogens
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/hydrogens/hydrogens.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/hydrogens/hydrogens.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/hydrogens/hydrogens.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens/hydrogens.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/EWIEGA46WW/moc_hydrogens.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include/HydrogensPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Hydrogens_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Forcefield
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefield.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/obmmenergy.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/scriptenergy.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefield.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/forcefield/scriptenergy.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/forcefield.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/forcefielddialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefielddialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefield.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/forcefield/obmmenergy.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/EWIEGA46WW/moc_forcefielddialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/ForcefieldPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/ForcefieldPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include/obmmenergy.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/forcefield/Forcefield_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Forcefield_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target ImportPQR
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/importpqr.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrrequest.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrwidget.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/importpqr.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrrequest.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/importpqr/pqrwidget.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/importpqr.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/importpqr.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/pqrrequest.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrrequest.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrrequest.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/importpqr/pqrwidget.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_importpqr.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/EWIEGA46WW/moc_pqrwidget.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include/ImportPQRPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target ImportPQR_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target NucleicInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertdna/insertdna.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertdna/insertdna.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertdna/insertdna.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna/insertdna.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include/NucleicInputPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/EWIEGA46WW/moc_insertdna.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target NucleicInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target Label
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/Label_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/label/label.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/label/label.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/label/LabelPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/label/label.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/label.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/label/LabelPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/Label_autogen/include/LabelPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/Label_autogen/EWIEGA46WW/moc_label.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/label/Label_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target Label_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target LineFormatInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lineformatinput/lineformatinput.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinput.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinputdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinput.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/EWIEGA46WW/moc_lineformatinputdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include/LineFormatInputPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target LineFormatInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Automatic MOC for target NetworkDatabases
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/networkdatabases/networkdatabases.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases/networkdatabases.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/EWIEGA46WW/moc_networkdatabases.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include/NetworkDatabasesPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Built target NetworkDatabases_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Automatic MOC for target PLY
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/ply/ply.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/ply/ply.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/ply/PLYPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/ply/ply.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply/ply.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/ply/PLYPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLYPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/EWIEGA46WW/moc_ply.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/include/PLYPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/ply/PLY_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Built target PLY_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Automatic MOC for target POVRay
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/povray/povray.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/povray/povray.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/povray/POVRayPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/povray/povray.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray/povray.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/povray/POVRayPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRayPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/EWIEGA46WW/moc_povray.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/include/POVRayPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/povray/POVRay_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Built target POVRay_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Automatic MOC for target OpenBabel
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obcharges.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obfileformat.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obprocess.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/openbabel.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obcharges.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obfileformat.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/obprocess.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openbabel/openbabel.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obforcefielddialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obforcefielddialog.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obprocess.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obprocess.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obforcefielddialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/openbabel.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/openbabel.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_obprocess.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obcharges.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/EWIEGA46WW/moc_openbabel.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc", because it doesn't exist, from "SRC:/avogadro/qtplugins/openbabel/obfileformat.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obfileformat.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obfileformat.moc.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/OpenBabelPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include/obcharges.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 35%] Built target OpenBabel_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target Select
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/select/Select_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/select/select.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/select/select.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/select/SelectPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/select/select.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select/select.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/select/SelectPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/SelectPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/select/Select_autogen/include/SelectPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/select/Select_autogen/EWIEGA46WW/moc_select.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/select/Select_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target Select_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target PropertyTables
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertymodel.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertytables.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertyview.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertymodel.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertytables.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/propertytables/propertyview.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertymodel.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertymodel.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertytables.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertytables.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertytables.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/propertytables/propertyview.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertymodel.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include/PropertyTablesPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/EWIEGA46WW/moc_propertyview.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target PropertyTables_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target SpaceGroup
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/spacegroup/spacegroup.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/spacegroup/spacegroup.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spacegroup/spacegroup.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup/spacegroup.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/EWIEGA46WW/moc_spacegroup.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include/SpaceGroupPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target SpaceGroup_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target LammpsInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lammpsinput/lammpsinput.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinput.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinput.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/EWIEGA46WW/moc_lammpsinputdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include/LammpsInputPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target LammpsInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target OpenMMInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminput.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminput.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openmminput/openmminput.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminput.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/openmminput/openmminputdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminputdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminput.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/EWIEGA46WW/moc_openmminputdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include/OpenMMInputPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target OpenMMInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target CoordinateEditor
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditor.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditor.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditor.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinatetextedit.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinatetextedit.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/EWIEGA46WW/moc_coordinateeditordialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include/CoordinateEditorPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target CoordinateEditor_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target InsertFragment
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragment.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragmentdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragment.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/insertfragmentdialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/insertfragment.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/insertfragmentdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragmentdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragmentdialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/sortfiltertreeproxymodel.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_insertfragment.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/EWIEGA46WW/moc_sortfiltertreeproxymodel.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include/InsertFragmentPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target InsertFragment_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target MolecularProperties
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/molecularproperties/molecularproperties.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularproperties.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularproperties.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/EWIEGA46WW/moc_molecularpropertiesdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include/MolecularPropertiesPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target MolecularProperties_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target VRML
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/vrml/vrml.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/vrml/vrml.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vrml/vrml.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml/vrml.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/EWIEGA46WW/moc_vrml.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/include/VRMLPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/vrml/VRML_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target Spectra
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/spectra.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationmodel.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/spectra.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationdialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/spectra/vibrationmodel.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_spectra.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spectra/spectra.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_spectra.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/spectra.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_vibrationdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/spectra/vibrationdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_vibrationdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_spectra.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/include/SpectraPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include/SpectraPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/include/SpectraPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/EWIEGA46WW/moc_vibrationdialog.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/spectra/Spectra_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target VRML_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/depend
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target Spectra_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target ScriptCharges
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptchargemodel.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/scriptcharges/scriptcharges.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptcharges.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include/ScriptChargesPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/EWIEGA46WW/moc_scriptcharges.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target ScriptCharges_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target commands
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/commandscripts/command.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/commandscripts/command.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/commandscripts/command.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts/command.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/EWIEGA46WW/moc_command.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/include/commandsPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Built target commands_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 36%] Automatic MOC for target ScriptFileFormats
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/fileformatscript.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/scriptfileformats/scriptfileformats.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats/scriptfileformats.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/EWIEGA46WW/moc_scriptfileformats.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include/ScriptFileFormatsPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target ScriptFileFormats_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Automatic MOC for target BallStick
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/ballandstick/ballandstick.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/ballandstick/ballandstick.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/ballandstick/ballandstick.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick/ballandstick.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/EWIEGA46WW/moc_ballandstick.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include/BallStickPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target BallStick_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Automatic MOC for target PluginDownloader
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/zipextracter.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/plugindownloader/zipextracter.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/plugindownloader/downloaderwidget.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/downloaderwidget.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/plugindownloader/plugindownloader.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/plugindownloader.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_plugindownloader.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/EWIEGA46WW/moc_downloaderwidget.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include/PluginDownloaderPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target PluginDownloader_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Automatic MOC for target CloseContacts
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/closecontacts/closecontacts.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/closecontacts/closecontacts.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/closecontacts/closecontacts.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts/closecontacts.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include/CloseContactsPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/EWIEGA46WW/moc_closecontacts.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target CloseContacts_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Automatic MOC for target Force
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/force/Force_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/force/force.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/force/force.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/force/ForcePlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/force/force.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force/force.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/force/ForcePlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/ForcePlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/force/Force_autogen/EWIEGA46WW/moc_force.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/force/Force_autogen/include/ForcePlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/force/Force_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target Force_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Automatic MOC for target Licorice
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/licorice/licorice.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/licorice/licorice.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/licorice/licorice.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice/licorice.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/include/LicoricePlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/EWIEGA46WW/moc_licorice.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/licorice/Licorice_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target Licorice_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Automatic MOC for target Meshes
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/meshes/meshes.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/meshes/meshes.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/meshes/meshes.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/include/MeshesPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/EWIEGA46WW/moc_meshes.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target Meshes_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Automatic MOC for target NonCovalent
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/noncovalent/noncovalent.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/noncovalent/noncovalent.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/noncovalent/noncovalent.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent/noncovalent.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalentPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include/NonCovalentPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/EWIEGA46WW/moc_noncovalent.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target NonCovalent_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Automatic MOC for target VanDerWaals
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/vanderwaals/vanderwaals.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals/vanderwaals.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/EWIEGA46WW/moc_vanderwaals.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include/VanDerWaalsPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target VanDerWaals_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Automatic MOC for target Wireframe
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/wireframe/wireframe.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/wireframe/wireframe.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/wireframe/wireframe.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe/wireframe.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/EWIEGA46WW/moc_wireframe.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include/WireframePlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/wireframe/Wireframe_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 39%] Built target Wireframe_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 39%] Automatic MOC for target QTAIMExtension
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtConcurrent -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcriticalpointlocator.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimextension.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcubature.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimmathutilities.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimodeintegrator.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunction.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcriticalpointlocator.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimcubature.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimextension.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimmathutilities.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunction.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/EWIEGA46WW/moc_qtaimextension.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/qtaim/qtaimextension.h"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtConcurrent -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/EWIEGA46WW/moc_qtaimextension.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimextension.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include/QTAIMExtensionPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtConcurrent -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include/QTAIMExtensionPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include/QTAIMExtensionPlugin.moc.d"
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AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/ParseCache.txt"
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_molequeuewidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_inputgeneratordialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/ui_inputgeneratorwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratorwidget.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/batchjob.cpp.o -MF CMakeFiles/MoleQueue.dir/batchjob.cpp.o.d -o CMakeFiles/MoleQueue.dir/batchjob.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.cpp
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[ 41%] Building CXX object avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtOpenGL_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/QtOpenGL_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o -MF CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o.d -o CMakeFiles/QtOpenGL.dir/activeobjects.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o -MF CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o.d -o CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtOpenGL.so.1.98.1 ../../lib/libAvogadroQtOpenGL.so.1 ../../lib/libAvogadroQtOpenGL.so
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o -MF CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o.d -o CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -MF CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o.d -o CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol/3dmoldialog.cpp
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[ 44%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o -MF CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jobobject.cpp
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[ 44%] Building CXX object avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMol_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -MF CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o.d -o CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/ThreeDMolPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -P CMakeFiles/ThreeDMol.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_link_script CMakeFiles/ThreeDMol.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ThreeDMol.a CMakeFiles/ThreeDMol.dir/ThreeDMol_autogen/mocs_compilation.cpp.o CMakeFiles/ThreeDMol.dir/3dmol.cpp.o CMakeFiles/ThreeDMol.dir/3dmoldialog.cpp.o CMakeFiles/ThreeDMol.dir/ThreeDMolPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ThreeDMol.a
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[ 44%] Generating ui_chargedialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ui_chargedialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors/chargedialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/DependInfo.cmake "--color="
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[ 44%] Building CXX object avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/g++ -DMoleQueue_EXPORTS -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/MoleQueue_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/molequeue/CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -MF CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o.d -o CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.cpp
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[ 44%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 44%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/applycolors.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/applycolors.cpp.o -MF CMakeFiles/ApplyColors.dir/applycolors.cpp.o.d -o CMakeFiles/ApplyColors.dir/applycolors.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors/applycolors.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 44%] Linking CXX shared library ../../lib/libAvogadroMoleQueue.so
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_link_script CMakeFiles/MoleQueue.dir/link.txt --verbose=1
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroMoleQueue.so.1 -o ../../lib/libAvogadroMoleQueue.so.1.98.1 CMakeFiles/MoleQueue.dir/MoleQueue_autogen/mocs_compilation.cpp.o CMakeFiles/MoleQueue.dir/batchjob.cpp.o CMakeFiles/MoleQueue.dir/inputgenerator.cpp.o CMakeFiles/MoleQueue.dir/inputgeneratordialog.cpp.o CMakeFiles/MoleQueue.dir/inputgeneratorwidget.cpp.o CMakeFiles/MoleQueue.dir/molequeuedialog.cpp.o CMakeFiles/MoleQueue.dir/molequeuemanager.cpp.o CMakeFiles/MoleQueue.dir/molequeuequeuelistmodel.cpp.o CMakeFiles/MoleQueue.dir/molequeuewidget.cpp.o CMakeFiles/MoleQueue.dir/client/client.cpp.o CMakeFiles/MoleQueue.dir/client/jobobject.cpp.o CMakeFiles/MoleQueue.dir/client/jsonrpcclient.cpp.o  -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroIO.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroMoleQueue.so.1.98.1 ../../lib/libAvogadroMoleQueue.so.1 ../../lib/libAvogadroMoleQueue.so
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 44%] Built target MoleQueue
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 45%] Automatic MOC for target AlignTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/aligntool/aligntool.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/aligntool/aligntool.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/aligntool/aligntool.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/EWIEGA46WW/moc_aligntool.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include/AlignToolPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/aligntool/AlignTool_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 45%] Built target AlignTool_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Automatic MOC for target BondCentric
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/bondcentrictool/bondcentrictool.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentricPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/EWIEGA46WW/moc_bondcentrictool.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include/BondCentricPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Built target BondCentric_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Generating ui_bondingdialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/ui_bondingdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding/bondingdialog.ui
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 44%] Building CXX object avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColors_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o -MF CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o.d -o CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/ApplyColorsPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ApplyColors.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -P CMakeFiles/ApplyColors.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_link_script CMakeFiles/ApplyColors.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ApplyColors.a CMakeFiles/ApplyColors.dir/ApplyColors_autogen/mocs_compilation.cpp.o CMakeFiles/ApplyColors.dir/applycolors.cpp.o CMakeFiles/ApplyColors.dir/ApplyColorsPlugin.cpp.o
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/Cartoons_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o -MF CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o.d -o CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CartoonsPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -P CMakeFiles/Cartoons.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cartoons.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Cartoons.a CMakeFiles/Cartoons.dir/Cartoons_autogen/mocs_compilation.cpp.o CMakeFiles/Cartoons.dir/cartoons.cpp.o CMakeFiles/Cartoons.dir/CartoonsPlugin.cpp.o
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/centroid.cpp.o -MF CMakeFiles/Centroid.dir/centroid.cpp.o.d -o CMakeFiles/Centroid.dir/centroid.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid/centroid.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/mocs_compilation.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/Centroid_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o -MF CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o.d -o CMakeFiles/Centroid.dir/CentroidPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CentroidPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_link_script CMakeFiles/Centroid.dir/link.txt --verbose=1
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[ 48%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/copypaste.cpp.o -MF CMakeFiles/CopyPaste.dir/copypaste.cpp.o.d -o CMakeFiles/CopyPaste.dir/copypaste.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste/copypaste.cpp
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[ 49%] Building CXX object avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPaste_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -MF CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o.d -o CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CopyPastePlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -P CMakeFiles/CopyPaste.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_link_script CMakeFiles/CopyPaste.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CopyPaste.a CMakeFiles/CopyPaste.dir/CopyPaste_autogen/mocs_compilation.cpp.o CMakeFiles/CopyPaste.dir/copypaste.cpp.o CMakeFiles/CopyPaste.dir/CopyPastePlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CopyPaste.a
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -MF CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/CrystalScene.dir/CrystalScene_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/mocs_compilation.cpp
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[ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -MF CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o.d -o CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/importcrystaldialog.cpp
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[ 49%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/crystalscene.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalScene_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/crystalscene.cpp.o -MF CMakeFiles/CrystalScene.dir/crystalscene.cpp.o.d -o CMakeFiles/CrystalScene.dir/crystalscene.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp
In file included from /usr/include/c++/13/vector:66,
                 from /usr/include/c++/13/functional:64,
                 from /usr/include/eigen3/Eigen/Core:85,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp:6:
In member function ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::resize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::resize(unsigned long const&, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:177:19,
    inlined from ‘Avogadro::QtPlugins::CrystalScene::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp:79:17:
/usr/include/c++/13/bits/stl_vector.h:1034:25: warning: ‘<anonymous>’ may be used uninitialized [-Wmaybe-uninitialized]
 1034 |           _M_fill_insert(end(), __new_size - size(), __x);
      |           ~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
In file included from /usr/include/c++/13/vector:72:
/usr/include/c++/13/bits/vector.tcc: In member function ‘Avogadro::QtPlugins::CrystalScene::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’:
/usr/include/c++/13/bits/vector.tcc:529:5: note: by argument 4 of type ‘const struct value_type &’ to ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_insert(__gnu_cxx::__normal_iterator<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > > >, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ declared here
  529 |     vector<_Tp, _Alloc>::
      |     ^~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/crystalscene.cpp:79:17: note: ‘<anonymous>’ declared here
   79 |     strip.resize(2);
      |     ~~~~~~~~~~~~^~~
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editor.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editortoolwidget.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editor.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/editor/editortoolwidget.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/editor/EditorPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/editor/editor.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editor.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/editor/editortoolwidget.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editortoolwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editortoolwidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/editor/EditorPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/EditorPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/EWIEGA46WW/moc_editor.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/include/EditorPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/editor/Editor_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 52%] Built target Editor_autogen
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/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/DependInfo.cmake "--color="
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[ 52%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o -MF CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/mocs_compilation.cpp
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[ 52%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -MF CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o.d -o CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal/volumescalingdialog.cpp
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[ 52%] Building CXX object avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/Crystal_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -MF CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o.d -o CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CrystalPlugin.cpp
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[ 52%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Crystal.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -P CMakeFiles/Crystal.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_link_script CMakeFiles/Crystal.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Crystal.a CMakeFiles/Crystal.dir/Crystal_autogen/mocs_compilation.cpp.o CMakeFiles/Crystal.dir/crystal.cpp.o CMakeFiles/Crystal.dir/importcrystaldialog.cpp.o CMakeFiles/Crystal.dir/supercelldialog.cpp.o CMakeFiles/Crystal.dir/unitcelldialog.cpp.o CMakeFiles/Crystal.dir/volumescalingdialog.cpp.o CMakeFiles/Crystal.dir/CrystalPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Crystal.a
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[ 52%] Built target Crystal
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/usr/bin/make  -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/DependInfo.cmake "--color="
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 52%] Automatic MOC for target Focus
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/focus/focus.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/focus/focus.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/focus/FocusPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/focus/focus.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus/focus.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/focus/FocusPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/FocusPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/include/FocusPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/EWIEGA46WW/moc_focus.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/focus/Focus_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 52%] Generating ui_forcefielddialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/ui_forcefielddialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefielddialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Forcefield.dir/Forcefield_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/mocs_compilation.cpp
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[ 52%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o -MF CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o.d -o CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb/fetchpdb.cpp
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[ 53%] Building CXX object avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDB_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o -MF CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o.d -o CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/FetchPDBPlugin.cpp
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[ 53%] Linking CXX static library ../../../lib/avogadro2/staticplugins/FetchPDB.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -P CMakeFiles/FetchPDB.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_link_script CMakeFiles/FetchPDB.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/FetchPDB.a CMakeFiles/FetchPDB.dir/FetchPDB_autogen/mocs_compilation.cpp.o CMakeFiles/FetchPDB.dir/fetchpdb.cpp.o CMakeFiles/FetchPDB.dir/FetchPDBPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/FetchPDB.a
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[ 53%] Built target FetchPDB
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/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/DependInfo.cmake "--color="
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 53%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 54%] Building CXX object avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/hydrogens.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/hydrogens.cpp.o -MF CMakeFiles/Hydrogens.dir/hydrogens.cpp.o.d -o CMakeFiles/Hydrogens.dir/hydrogens.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens/hydrogens.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/Hydrogens_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o -MF CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o.d -o CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/HydrogensPlugin.cpp
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/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Hydrogens.a CMakeFiles/Hydrogens.dir/Hydrogens_autogen/mocs_compilation.cpp.o CMakeFiles/Hydrogens.dir/hydrogens.cpp.o CMakeFiles/Hydrogens.dir/HydrogensPlugin.cpp.o
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[ 52%] Building CXX object avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefield.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/forcefield.cpp.o -MF CMakeFiles/Forcefield.dir/forcefield.cpp.o.d -o CMakeFiles/Forcefield.dir/forcefield.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp: In member function ‘void Avogadro::QtPlugins::Forcefield::optimize()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:215:25: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  215 |     for (Index i = 0; i < 3 * n; ++i) {
      |                       ~~^~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:267:28: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  267 |       for (size_t i = 0; i < n; ++i) {
      |                          ~~^~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:265:12: warning: variable ‘isFinite’ set but not used [-Wunused-but-set-variable]
  265 |       bool isFinite = true;
      |            ^~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp: In member function ‘void Avogadro::QtPlugins::Forcefield::freezeSelected()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:367:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  367 |   for (Index i = 0; i < numAtoms; ++i) {
      |                     ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp: In member function ‘void Avogadro::QtPlugins::Forcefield::unfreezeSelected()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:381:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
  381 |   for (Index i = 0; i < numAtoms; ++i) {
      |                     ~~^~~~~~~~~~
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/forcefield.cpp:22:
/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/avogadropython.h: At global scope:
/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/avogadropython.h:2:20: warning: ‘Avogadro::pythonInterpreterPath’ defined but not used [-Wunused-variable]
    2 | static const char *pythonInterpreterPath = "/usr/bin/python3";
      |                    ^~~~~~~~~~~~~~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/obmmenergy.cpp.o -MF CMakeFiles/Forcefield.dir/obmmenergy.cpp.o.d -o CMakeFiles/Forcefield.dir/obmmenergy.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp: In constructor ‘Avogadro::QtPlugins::OBMMEnergy::ProcessListener::ProcessListener(QProcess*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:61:8: warning: ‘Avogadro::QtPlugins::OBMMEnergy::ProcessListener::m_finished’ will be initialized after [-Wreorder]
   61 |   bool m_finished;
      |        ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:60:13: warning:   ‘QProcess* Avogadro::QtPlugins::OBMMEnergy::ProcessListener::m_process’ [-Wreorder]
   60 |   QProcess* m_process;
      |             ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:23:3: warning:   when initialized here [-Wreorder]
   23 |   ProcessListener(QProcess* proc)
      |   ^~~~~~~~~~~~~~~
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.h: In constructor ‘Avogadro::QtPlugins::OBMMEnergy::OBMMEnergy(const std::string&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.h:86:15: warning: ‘Avogadro::QtPlugins::OBMMEnergy::m_name’ will be initialized after [-Wreorder]
   86 |   std::string m_name;
      |               ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.h:81:13: warning:   ‘QProcess* Avogadro::QtPlugins::OBMMEnergy::m_process’ [-Wreorder]
   81 |   QProcess* m_process;
      |             ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:65:1: warning:   when initialized here [-Wreorder]
   65 | OBMMEnergy::OBMMEnergy(const std::string& method)
      | ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp: In member function ‘virtual Avogadro::Real Avogadro::QtPlugins::OBMMEnergy::value(const Eigen::VectorXd&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:261:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase<Eigen::Matrix<double, -1, 1> >::Index’ {aka ‘long int’} [-Wsign-compare]
  261 |   for (Index i = 0; i < x.size(); i += 3) {
      |                     ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp: In member function ‘virtual void Avogadro::QtPlugins::OBMMEnergy::gradient(const Eigen::VectorXd&, Eigen::VectorXd&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/obmmenergy.cpp:317:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase<Eigen::Matrix<double, -1, 1> >::Index’ {aka ‘long int’} [-Wsign-compare]
  317 |   for (Index i = 0; i < x.size(); i += 3) {
      |                     ~~^~~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/Forcefield_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/scriptenergy.cpp.o -MF CMakeFiles/Forcefield.dir/scriptenergy.cpp.o.d -o CMakeFiles/Forcefield.dir/scriptenergy.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.h: In constructor ‘Avogadro::QtPlugins::ScriptEnergy::ScriptEnergy(const QString&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.h:91:8: warning: ‘Avogadro::QtPlugins::ScriptEnergy::m_valid’ will be initialized after [-Wreorder]
   91 |   bool m_valid;
      |        ^~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.h:86:10: warning:   ‘Avogadro::QtPlugins::ScriptEnergy::Format Avogadro::QtPlugins::ScriptEnergy::m_inputFormat’ [-Wreorder]
   86 |   Format m_inputFormat;
      |          ^~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:29:1: warning:   when initialized here [-Wreorder]
   29 | ScriptEnergy::ScriptEnergy(const QString& scriptFileName_)
      | ^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp: In member function ‘virtual Avogadro::Real Avogadro::QtPlugins::ScriptEnergy::value(const Eigen::VectorXd&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:116:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase<Eigen::Matrix<double, -1, 1> >::Index’ {aka ‘long int’} [-Wsign-compare]
  116 |   for (Index i = 0; i < x.size(); i += 3) {
      |                     ~~^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp: In member function ‘virtual void Avogadro::QtPlugins::ScriptEnergy::gradient(const Eigen::VectorXd&, Eigen::VectorXd&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield/scriptenergy.cpp:149:23: warning: comparison of integer expressions of different signedness: ‘Avogadro::Index’ {aka ‘long unsigned int’} and ‘Eigen::EigenBase<Eigen::Matrix<double, -1, 1> >::Index’ {aka ‘long int’} [-Wsign-compare]
  149 |   for (Index i = 0; i < x.size(); i += 3) {
      |                     ~~^~~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o -MF CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o.d -o CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr/pqrrequest.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 57%] Building CXX object avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQR_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o -MF CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o.d -o CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/ImportPQRPlugin.cpp
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[ 57%] Linking CXX static library ../../../lib/avogadro2/staticplugins/ImportPQR.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -P CMakeFiles/ImportPQR.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_link_script CMakeFiles/ImportPQR.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/ImportPQR.a CMakeFiles/ImportPQR.dir/ImportPQR_autogen/mocs_compilation.cpp.o CMakeFiles/ImportPQR.dir/importpqr.cpp.o CMakeFiles/ImportPQR.dir/pqrwidget.cpp.o CMakeFiles/ImportPQR.dir/pqrrequest.cpp.o CMakeFiles/ImportPQR.dir/ImportPQRPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/ImportPQR.a
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[ 57%] Built target ImportPQR
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label.dir/DependInfo.cmake "--color="
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[ 57%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/mocs_compilation.cpp
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[ 56%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/insertdna.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/insertdna.cpp.o -MF CMakeFiles/NucleicInput.dir/insertdna.cpp.o.d -o CMakeFiles/NucleicInput.dir/insertdna.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna/insertdna.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 57%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/label.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/label.cpp.o -MF CMakeFiles/Label.dir/label.cpp.o.d -o CMakeFiles/Label.dir/label.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/label.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 57%] Building CXX object avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o -MF CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o.d -o CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/NucleicInputPlugin.cpp
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[ 58%] Linking CXX static library ../../../lib/avogadro2/staticplugins/NucleicInput.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -P CMakeFiles/NucleicInput.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_link_script CMakeFiles/NucleicInput.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NucleicInput.a CMakeFiles/NucleicInput.dir/NucleicInput_autogen/mocs_compilation.cpp.o CMakeFiles/NucleicInput.dir/insertdna.cpp.o CMakeFiles/NucleicInput.dir/NucleicInputPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/NucleicInput.a
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[ 58%] Built target NucleicInput
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/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/DependInfo.cmake "--color="
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/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build
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[ 58%] Automatic MOC for target LabelEditor
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/label/labeleditor.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/label/labeleditor.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/label/labeleditor.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/labeleditor.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/include/LabelEditorPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/EWIEGA46WW/moc_labeleditor.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/label/LabelEditor_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Built target LabelEditor_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Generating ui_lineformatinputdialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/ui_lineformatinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinputdialog.ui
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Building CXX object avogadro/qtplugins/label/CMakeFiles/Label.dir/LabelPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/Label_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/Label.dir/LabelPlugin.cpp.o -MF CMakeFiles/Label.dir/LabelPlugin.cpp.o.d -o CMakeFiles/Label.dir/LabelPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Label.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -P CMakeFiles/Label.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_link_script CMakeFiles/Label.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Label.a CMakeFiles/Label.dir/Label_autogen/mocs_compilation.cpp.o CMakeFiles/Label.dir/label.cpp.o CMakeFiles/Label.dir/LabelPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Label.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Built target Label
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Automatic MOC for target Manipulator
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/manipulator/manipulator.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/manipulator/manipulator.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/manipulator/manipulator.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulator.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/EWIEGA46WW/moc_manipulator.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include/ManipulatorPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/manipulator/Manipulator_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Built target Manipulator_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 59%] Automatic MOC for target MeasureTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/measuretool/measuretool.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/measuretool/measuretool.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/measuretool/measuretool.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/EWIEGA46WW/moc_measuretool.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include/MeasureToolPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 59%] Built target MeasureTool_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 59%] Automatic MOC for target Navigator
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/navigator/navigator.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/navigator/navigator.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/navigator/navigator.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator/navigator.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/EWIEGA46WW/moc_navigator.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/include/NavigatorPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/navigator/Navigator_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 59%] Built target Navigator_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 60%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/mocs_compilation.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o -MF CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o.d -o CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinput.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o -MF CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o.d -o CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput/lineformatinputdialog.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o -MF CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases/networkdatabases.cpp
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[ 61%] Building CXX object avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o -MF CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o.d -o CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/LineFormatInputPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/LineFormatInput.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LineFormatInput.a CMakeFiles/LineFormatInput.dir/LineFormatInput_autogen/mocs_compilation.cpp.o CMakeFiles/LineFormatInput.dir/lineformatinput.cpp.o CMakeFiles/LineFormatInput.dir/lineformatinputdialog.cpp.o CMakeFiles/LineFormatInput.dir/LineFormatInputPlugin.cpp.o
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/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/depend
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[ 61%] Building CXX object avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabases_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o -MF CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o.d -o CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/NetworkDatabasesPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -P CMakeFiles/NetworkDatabases.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_link_script CMakeFiles/NetworkDatabases.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/NetworkDatabases.a CMakeFiles/NetworkDatabases.dir/NetworkDatabases_autogen/mocs_compilation.cpp.o CMakeFiles/NetworkDatabases.dir/networkdatabases.cpp.o CMakeFiles/NetworkDatabases.dir/NetworkDatabasesPlugin.cpp.o
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/usr/bin/make  -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/DependInfo.cmake "--color="
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 61%] Automatic MOC for target PlayerTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/playertool/playertool.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/playertool/playertool.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/playertool/playertool.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool/playertool.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/EWIEGA46WW/moc_playertool.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include/PlayerToolPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/playertool/PlayerTool_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 61%] Built target PlayerTool_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY.dir/DependInfo.cmake "--color="
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 61%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenBabel.dir/OpenBabel_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/mocs_compilation.cpp
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[ 61%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PLY.dir/PLY_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/mocs_compilation.cpp
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[ 61%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obcharges.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obcharges.cpp.o -MF CMakeFiles/OpenBabel.dir/obcharges.cpp.o.d -o CMakeFiles/OpenBabel.dir/obcharges.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.h: In constructor ‘Avogadro::QtPlugins::OBCharges::OBCharges(const std::string&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.h:65:15: warning: ‘Avogadro::QtPlugins::OBCharges::m_identifier’ will be initialized after [-Wreorder]
   65 |   std::string m_identifier;
      |               ^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp:65:77: warning:   base ‘Avogadro::Calc::ChargeModel’ [-Wreorder]
   65 | OBCharges::OBCharges(const std::string& id) : m_identifier(id), ChargeModel()
      |                                                                             ^
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obcharges.cpp:65:1: warning:   when initialized here [-Wreorder]
   65 | OBCharges::OBCharges(const std::string& id) : m_identifier(id), ChargeModel()
      | ^~~~~~~~~
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[ 61%] Building CXX object avogadro/qtplugins/ply/CMakeFiles/PLY.dir/ply.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/ply.cpp.o -MF CMakeFiles/PLY.dir/ply.cpp.o.d -o CMakeFiles/PLY.dir/ply.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply/ply.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLY_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ply/CMakeFiles/PLY.dir/PLYPlugin.cpp.o -MF CMakeFiles/PLY.dir/PLYPlugin.cpp.o.d -o CMakeFiles/PLY.dir/PLYPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/PLYPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obfileformat.cpp.o -MF CMakeFiles/OpenBabel.dir/obfileformat.cpp.o.d -o CMakeFiles/OpenBabel.dir/obfileformat.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obfileformat.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/povray.cpp.o -MF CMakeFiles/POVRay.dir/povray.cpp.o.d -o CMakeFiles/POVRay.dir/povray.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray/povray.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRay_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o -MF CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o.d -o CMakeFiles/POVRay.dir/POVRayPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/POVRayPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o -MF CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o.d -o CMakeFiles/OpenBabel.dir/obforcefielddialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/obforcefielddialog.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/mocs_compilation.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertytables.cpp.o -MF CMakeFiles/PropertyTables.dir/propertytables.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertytables.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertytables.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/openbabel.cpp.o -MF CMakeFiles/OpenBabel.dir/openbabel.cpp.o.d -o CMakeFiles/OpenBabel.dir/openbabel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel/openbabel.cpp
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[ 63%] Building CXX object avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabel_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o -MF CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o.d -o CMakeFiles/OpenBabel.dir/OpenBabelPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/OpenBabelPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -P CMakeFiles/OpenBabel.dir/cmake_clean_target.cmake
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/DependInfo.cmake "--color="
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AutoGen: Parsing "SRC:/avogadro/qtplugins/resetview/resetview.h"
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/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview/resetview.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/resetview/ResetViewPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetViewPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/EWIEGA46WW/moc_resetview.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/include/ResetViewPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/resetview/ResetView_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenUsed.txt"
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select.dir/DependInfo.cmake "--color="
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[ 63%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/mocs_compilation.cpp
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[ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertymodel.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertymodel.cpp.o -MF CMakeFiles/PropertyTables.dir/propertymodel.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertymodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertymodel.cpp
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[ 63%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/select.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/select.cpp.o -MF CMakeFiles/Select.dir/select.cpp.o.d -o CMakeFiles/Select.dir/select.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select/select.cpp
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[ 63%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertyview.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/propertyview.cpp.o -MF CMakeFiles/PropertyTables.dir/propertyview.cpp.o.d -o CMakeFiles/PropertyTables.dir/propertyview.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h: In constructor ‘Avogadro::PropertyView::PropertyView(Avogadro::PropertyType, QWidget*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h:35:20: warning: ‘Avogadro::PropertyView::m_molecule’ will be initialized after [-Wreorder]
   35 |   QtGui::Molecule* m_molecule;
      |                    ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.h:34:16: warning:   ‘Avogadro::PropertyType Avogadro::PropertyView::m_type’ [-Wreorder]
   34 |   PropertyType m_type;
      |                ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:25:1: warning:   when initialized here [-Wreorder]
   25 | PropertyView::PropertyView(PropertyType type, QWidget* parent)
      | ^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp: In member function ‘virtual void Avogadro::PropertyView::selectionChanged(const QItemSelection&, const QItemSelection&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:100:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘Avogadro::Index’ {aka ‘long unsigned int’} [-Wsign-compare]
  100 |       if (rowNum >= m_molecule->atomCount())
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables/propertyview.cpp:105:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘Avogadro::Index’ {aka ‘long unsigned int’} [-Wsign-compare]
  105 |       if (rowNum >= m_molecule->bondCount())
      |           ~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 64%] Building CXX object avogadro/qtplugins/select/CMakeFiles/Select.dir/SelectPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/Select_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/select/CMakeFiles/Select.dir/SelectPlugin.cpp.o -MF CMakeFiles/Select.dir/SelectPlugin.cpp.o.d -o CMakeFiles/Select.dir/SelectPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/SelectPlugin.cpp
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[ 64%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Select.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -P CMakeFiles/Select.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_link_script CMakeFiles/Select.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Select.a CMakeFiles/Select.dir/Select_autogen/mocs_compilation.cpp.o CMakeFiles/Select.dir/select.cpp.o CMakeFiles/Select.dir/SelectPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Select.a
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[ 64%] Built target Select
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/DependInfo.cmake "--color="
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[ 64%] Automatic MOC for target Selection
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontool.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontool.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/selectiontool/selectiontool.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/selectiontool/selectiontoolwidget.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontool.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/EWIEGA46WW/moc_selectiontoolwidget.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/include/SelectionPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Built target Selection_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Building CXX object avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTables_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o -MF CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o.d -o CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/PropertyTablesPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Linking CXX static library ../../../lib/avogadro2/staticplugins/PropertyTables.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -P CMakeFiles/PropertyTables.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_link_script CMakeFiles/PropertyTables.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PropertyTables.a CMakeFiles/PropertyTables.dir/PropertyTables_autogen/mocs_compilation.cpp.o CMakeFiles/PropertyTables.dir/propertytables.cpp.o CMakeFiles/PropertyTables.dir/propertymodel.cpp.o CMakeFiles/PropertyTables.dir/propertyview.cpp.o CMakeFiles/PropertyTables.dir/PropertyTablesPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PropertyTables.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Built target PropertyTables
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o -MF CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Automatic MOC for target Surfaces
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfacedialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfaces.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfacedialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/surfaces/surfaces.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/gaussiansetconcurrent.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/slatersetconcurrent.h"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/slatersetconcurrent.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_gaussiansetconcurrent.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/surfacedialog.h"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfacedialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_slatersetconcurrent.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/surfaces/surfaces.h"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfacedialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/qt5/QtConcurrent -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/EWIEGA46WW/moc_surfaces.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include/SurfacesPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Built target Surfaces_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Generating ui_lammpsinputdialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/ui_lammpsinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui: Warning: Tab-stop assignment: 'moreButton' is not a valid widget.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.ui: Warning: Tab-stop assignment: 'previewText' is not a valid widget.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o -MF CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o.d -o CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup/spacegroup.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Building CXX object avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroup_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o -MF CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o.d -o CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/SpaceGroupPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -P CMakeFiles/SpaceGroup.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_link_script CMakeFiles/SpaceGroup.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/SpaceGroup.a CMakeFiles/SpaceGroup.dir/SpaceGroup_autogen/mocs_compilation.cpp.o CMakeFiles/SpaceGroup.dir/spacegroup.cpp.o CMakeFiles/SpaceGroup.dir/SpaceGroupPlugin.cpp.o
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/ui_openmminputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminputdialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/DependInfo.cmake "--color="
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[ 66%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o -MF CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o.d -o CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinputdialog.cpp
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[ 66%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/OpenMMInput.dir/OpenMMInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/mocs_compilation.cpp
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[ 66%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o -MF CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o.d -o CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput/lammpsinput.cpp
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[ 66%] Building CXX object avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o -MF CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o.d -o CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/LammpsInputPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -P CMakeFiles/LammpsInput.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/LammpsInput.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LammpsInput.a CMakeFiles/LammpsInput.dir/LammpsInput_autogen/mocs_compilation.cpp.o CMakeFiles/LammpsInput.dir/lammpsinputdialog.cpp.o CMakeFiles/LammpsInput.dir/lammpsinput.cpp.o CMakeFiles/LammpsInput.dir/LammpsInputPlugin.cpp.o
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/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/ui_coordinateeditordialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.ui
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[ 66%] Building CXX object avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/OpenMMInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o -MF CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o.d -o CMakeFiles/OpenMMInput.dir/openmminputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput/openmminputdialog.cpp
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/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp: In member function ‘void Avogadro::QtPlugins::CoordinateEditorDialog::validateInputWorker()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:413:15: warning: unused variable ‘index’ [-Wunused-variable]
  413 |           int index = tokenCursor.selectedText().toInt(&isInt);
      |               ^~~~~
In member function ‘__ct ’,
    inlined from ‘QVector<(anonymous namespace)::AtomStruct>::append((anonymous namespace)::AtomStruct const&)’ at /usr/include/qt5/QtCore/qvector.h:793:13,
    inlined from ‘QVector<(anonymous namespace)::AtomStruct>::operator<<((anonymous namespace)::AtomStruct const&)’ at /usr/include/qt5/QtCore/qvector.h:293:13,
    inlined from ‘Avogadro::QtPlugins::CoordinateEditorDialog::validateInputWorker()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:509:28:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:93:8: warning: ‘atom.atomicNumber’ may be used uninitialized [-Wmaybe-uninitialized]
   93 | struct AtomStruct
      |        ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp: In member function ‘Avogadro::QtPlugins::CoordinateEditorDialog::validateInputWorker()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinateeditordialog.cpp:341:16: note: ‘atom.atomicNumber’ was declared here
  341 |     AtomStruct atom;
      |                ^~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -MF CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor/coordinatetextedit.cpp
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[ 68%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragment.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragment.cpp.o -MF CMakeFiles/InsertFragment.dir/insertfragment.cpp.o.d -o CMakeFiles/InsertFragment.dir/insertfragment.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h: In constructor ‘Avogadro::QtPlugins::InsertFragment::InsertFragment(QObject*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:50:25: warning: ‘Avogadro::QtPlugins::InsertFragment::m_crystalDialog’ will be initialized after [-Wreorder]
   50 |   InsertFragmentDialog* m_crystalDialog;
      |                         ^~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:49:25: warning:   ‘Avogadro::QtPlugins::InsertFragmentDialog* Avogadro::QtPlugins::InsertFragment::m_moleculeDialog’ [-Wreorder]
   49 |   InsertFragmentDialog* m_moleculeDialog;
      |                         ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp:28:1: warning:   when initialized here [-Wreorder]
   28 | InsertFragment::InsertFragment(QObject* parent_)
      | ^~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:55:19: warning: ‘Avogadro::QtPlugins::InsertFragment::m_reader’ will be initialized after [-Wreorder]
   55 |   Io::FileFormat* m_reader;
      |                   ^~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.h:54:20: warning:   ‘Avogadro::QtGui::Molecule* Avogadro::QtPlugins::InsertFragment::m_molecule’ [-Wreorder]
   54 |   QtGui::Molecule* m_molecule;
      |                    ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragment.cpp:28:1: warning:   when initialized here [-Wreorder]
   28 | InsertFragment::InsertFragment(QObject* parent_)
      | ^~~~~~~~~~~~~~
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[ 68%] Building CXX object avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o -MF CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o.d -o CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CoordinateEditorPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_link_script CMakeFiles/CoordinateEditor.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/CoordinateEditor.a CMakeFiles/CoordinateEditor.dir/CoordinateEditor_autogen/mocs_compilation.cpp.o CMakeFiles/CoordinateEditor.dir/coordinateeditor.cpp.o CMakeFiles/CoordinateEditor.dir/coordinateeditordialog.cpp.o CMakeFiles/CoordinateEditor.dir/coordinatetextedit.cpp.o CMakeFiles/CoordinateEditor.dir/CoordinateEditorPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/CoordinateEditor.a
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o -MF CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o.d -o CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment/insertfragmentdialog.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o -MF CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o.d -o CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularproperties.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 70%] Building CXX object avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragment_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o -MF CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o.d -o CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/InsertFragmentPlugin.cpp
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[ 70%] Linking CXX static library ../../../lib/avogadro2/staticplugins/InsertFragment.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -P CMakeFiles/InsertFragment.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_link_script CMakeFiles/InsertFragment.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/InsertFragment.a CMakeFiles/InsertFragment.dir/InsertFragment_autogen/mocs_compilation.cpp.o CMakeFiles/InsertFragment.dir/insertfragment.cpp.o CMakeFiles/InsertFragment.dir/insertfragmentdialog.cpp.o CMakeFiles/InsertFragment.dir/sortfiltertreeproxymodel.cpp.o CMakeFiles/InsertFragment.dir/InsertFragmentPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/InsertFragment.a
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/DependInfo.cmake "--color="
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/usr/bin/make  -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build
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[ 70%] Automatic MOC for target SVG
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
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/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/svg/svg.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/svg/svg.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/svg/SVGPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/svg/svg.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/svg/SVGPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtSvg -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVGPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/EWIEGA46WW/moc_svg.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/include/SVGPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/svg/SVG_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenUsed.txt"
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/ui_vibrationdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationdialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/DependInfo.cmake "--color="
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[ 70%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/mocs_compilation.cpp
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[ 70%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o -MF CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o.d -o CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties/molecularpropertiesdialog.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 71%] Building CXX object avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularProperties_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o -MF CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o.d -o CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/MolecularPropertiesPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 71%] Linking CXX static library ../../../lib/avogadro2/staticplugins/MolecularProperties.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -P CMakeFiles/MolecularProperties.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_link_script CMakeFiles/MolecularProperties.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/MolecularProperties.a CMakeFiles/MolecularProperties.dir/MolecularProperties_autogen/mocs_compilation.cpp.o CMakeFiles/MolecularProperties.dir/molecularproperties.cpp.o CMakeFiles/MolecularProperties.dir/molecularpropertiesdialog.cpp.o CMakeFiles/MolecularProperties.dir/MolecularPropertiesPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/MolecularProperties.a
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[ 71%] Built target MolecularProperties
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/usr/bin/make  -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/DependInfo.cmake "--color="
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 71%] Automatic MOC for target TemplateTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetool.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetool.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/templatetool/templatetool.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetool.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/templatetool/templatetoolwidget.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetoolwidget.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetoolwidget.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/TemplateToolPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/EWIEGA46WW/moc_templatetool.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/include/TemplateToolPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/templatetool/TemplateTool_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 71%] Built target TemplateTool_autogen
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/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/DependInfo.cmake "--color="
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/mocs_compilation.cpp
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[ 71%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationdialog.cpp.o -MF CMakeFiles/Spectra.dir/vibrationdialog.cpp.o.d -o CMakeFiles/Spectra.dir/vibrationdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationdialog.cpp
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/vrml.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/vrml.cpp.o -MF CMakeFiles/VRML.dir/vrml.cpp.o.d -o CMakeFiles/VRML.dir/vrml.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml/vrml.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationmodel.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/vibrationmodel.cpp.o -MF CMakeFiles/Spectra.dir/vibrationmodel.cpp.o.d -o CMakeFiles/Spectra.dir/vibrationmodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/vibrationmodel.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Building CXX object avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRMLPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRML_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/VRMLPlugin.cpp.o -MF CMakeFiles/VRML.dir/VRMLPlugin.cpp.o.d -o CMakeFiles/VRML.dir/VRMLPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/VRMLPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Linking CXX static library ../../../lib/avogadro2/staticplugins/VRML.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -P CMakeFiles/VRML.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_link_script CMakeFiles/VRML.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/VRML.a CMakeFiles/VRML.dir/VRML_autogen/mocs_compilation.cpp.o CMakeFiles/VRML.dir/vrml.cpp.o CMakeFiles/VRML.dir/VRMLPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/VRML.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Built target VRML
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Automatic MOC for target apbs
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbs.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/opendxreader.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbs.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsdialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/apbs/opendxreader.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/apbs/apbsPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbs.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbs.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbsdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbs.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/apbs/apbsoutputdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsoutputdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsoutputdialog.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/apbs/apbsPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbsPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/include/apbsPlugin.moc.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/EWIEGA46WW/moc_apbsdialog.cpp.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/apbs/apbs_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Built target apbs_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Automatic MOC for target Cp2kInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cp2kinput/cp2kinput.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinput.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinput.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/EWIEGA46WW/moc_cp2kinputdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include/Cp2kInputPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Built target Cp2kInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Automatic MOC for target GamessInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinput.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinput.cpp"
AutoGen: Parsing "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamesshighlighter.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamesshighlighter.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamessinput.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinput.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamesshighlighter.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/gamessinput/gamessinputdialog.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.h
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinput.cpp.d"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/EWIEGA46WW/moc_gamessinputdialog.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include/GamessInputPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 72%] Built target GamessInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 72%] Building CXX object avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -MF CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/commands.dir/commands_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 72%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/spectra.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/spectra.cpp.o -MF CMakeFiles/Spectra.dir/spectra.cpp.o.d -o CMakeFiles/Spectra.dir/spectra.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra/spectra.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 73%] Building CXX object avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/Spectra_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o -MF CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o.d -o CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/SpectraPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 73%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Spectra.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -P CMakeFiles/Spectra.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -E cmake_link_script CMakeFiles/Spectra.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Spectra.a CMakeFiles/Spectra.dir/Spectra_autogen/mocs_compilation.cpp.o CMakeFiles/Spectra.dir/vibrationdialog.cpp.o CMakeFiles/Spectra.dir/vibrationmodel.cpp.o CMakeFiles/Spectra.dir/spectra.cpp.o CMakeFiles/Spectra.dir/SpectraPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Spectra.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 73%] Built target Spectra
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 73%] Automatic MOC for target QuantumInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/quantuminput/quantuminput.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/quantuminput/quantuminput.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/quantuminput/quantuminput.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput/quantuminput.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/qt5/QtNetwork -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInputPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/EWIEGA46WW/moc_quantuminput.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include/QuantumInputPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 73%] Built target QuantumInput_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commands_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/commandsPlugin.cpp.o -MF CMakeFiles/commands.dir/commandsPlugin.cpp.o.d -o CMakeFiles/commands.dir/commandsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/commandsPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormats_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/mocs_compilation.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o -MF CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o.d -o CMakeFiles/ScriptCharges.dir/scriptchargemodel.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.h: In constructor ‘Avogadro::QtPlugins::ScriptChargeModel::ScriptChargeModel(const QString&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.h:86:8: warning: ‘Avogadro::QtPlugins::ScriptChargeModel::m_electrostatics’ will be initialized after [-Wreorder]
   86 |   bool m_electrostatics;
      |        ^~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.h:82:10: warning:   ‘Avogadro::QtPlugins::ScriptChargeModel::Format Avogadro::QtPlugins::ScriptChargeModel::m_inputFormat’ [-Wreorder]
   82 |   Format m_inputFormat;
      |          ^~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp:28:1: warning:   when initialized here [-Wreorder]
   28 | ScriptChargeModel::ScriptChargeModel(const QString& scriptFileName_)
      | ^~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp: In member function ‘virtual Avogadro::MatrixX Avogadro::QtPlugins::ScriptChargeModel::partialCharges(Avogadro::Core::Molecule&) const’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptchargemodel.cpp:95:30: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
   95 |   for (unsigned int i = 0; i < lines.size(); ++i) {
      |                            ~~^~~~~~~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o -MF CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o.d -o CMakeFiles/ScriptCharges.dir/scriptcharges.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges/scriptcharges.cpp
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[ 75%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/fileformatscript.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats/fileformatscript.cpp
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[ 75%] Building CXX object avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptCharges_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o -MF CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o.d -o CMakeFiles/ScriptCharges.dir/ScriptChargesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/ScriptChargesPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -P CMakeFiles/ScriptCharges.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptCharges.dir/link.txt --verbose=1
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[ 75%] Building CXX object avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormats_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -MF CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o.d -o CMakeFiles/ScriptFileFormats.dir/ScriptFileFormatsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/ScriptFileFormatsPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -P CMakeFiles/ScriptFileFormats.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_link_script CMakeFiles/ScriptFileFormats.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/mocs_compilation.cpp
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[ 76%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BallStick.dir/BallStick_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o -MF CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o.d -o CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/plugindownloader.cpp
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[ 76%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/ballandstick.cpp.o -MF CMakeFiles/BallStick.dir/ballandstick.cpp.o.d -o CMakeFiles/BallStick.dir/ballandstick.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick/ballandstick.cpp
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[ 76%] Building CXX object avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStick_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -MF CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o.d -o CMakeFiles/BallStick.dir/BallStickPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/BallStickPlugin.cpp
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/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/zipextracter.cpp: In member function ‘QList<QString> Avogadro::QtPlugins::ZipExtracter::extract(std::string, std::string)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader/zipextracter.cpp:110:8: warning: unused variable ‘itrCount’ [-Wunused-variable]
  110 |   long itrCount = 0;
      |        ^~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloader_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -MF CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o.d -o CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/PluginDownloaderPlugin.cpp
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/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PluginDownloader.a CMakeFiles/PluginDownloader.dir/PluginDownloader_autogen/mocs_compilation.cpp.o CMakeFiles/PluginDownloader.dir/plugindownloader.cpp.o CMakeFiles/PluginDownloader.dir/downloaderwidget.cpp.o CMakeFiles/PluginDownloader.dir/zipextracter.cpp.o CMakeFiles/PluginDownloader.dir/PluginDownloaderPlugin.cpp.o
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[ 77%] Building CXX object avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContacts_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o -MF CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o.d -o CMakeFiles/CloseContacts.dir/CloseContactsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CloseContactsPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Meshes.dir/Meshes_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/mocs_compilation.cpp
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[ 78%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/licorice.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/licorice.cpp.o -MF CMakeFiles/Licorice.dir/licorice.cpp.o.d -o CMakeFiles/Licorice.dir/licorice.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice/licorice.cpp
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[ 78%] Building CXX object avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/Licorice_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o -MF CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o.d -o CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/LicoricePlugin.cpp
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[ 78%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Licorice.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -P CMakeFiles/Licorice.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_link_script CMakeFiles/Licorice.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Licorice.a CMakeFiles/Licorice.dir/Licorice_autogen/mocs_compilation.cpp.o CMakeFiles/Licorice.dir/licorice.cpp.o CMakeFiles/Licorice.dir/LicoricePlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Licorice.a
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/DependInfo.cmake "--color="
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[ 78%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/meshes.cpp.o -MF CMakeFiles/Meshes.dir/meshes.cpp.o.d -o CMakeFiles/Meshes.dir/meshes.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >(Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >&)Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::Meshes::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp:88:51:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.390332].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp: In member function ‘Avogadro::QtPlugins::Meshes::process(Avogadro::QtGui::Molecule const&, Avogadro::Rendering::GroupNode&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes/meshes.cpp:88:51: note: ‘<anonymous>’ declared here
   88 |     Core::Array<Vector3ub> colorsRGB(colors.size());
      |                                                   ^
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[ 78%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o -MF CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/NonCovalent.dir/NonCovalent_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/mocs_compilation.cpp
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[ 78%] Building CXX object avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/Meshes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -MF CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o.d -o CMakeFiles/Meshes.dir/MeshesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/MeshesPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -P CMakeFiles/Meshes.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_link_script CMakeFiles/Meshes.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o -MF CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/mocs_compilation.cpp
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[ 79%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/noncovalent.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/NonCovalent_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/noncovalent.cpp.o -MF CMakeFiles/NonCovalent.dir/noncovalent.cpp.o.d -o CMakeFiles/NonCovalent.dir/noncovalent.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent/noncovalent.cpp
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[ 79%] Building CXX object avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o -MF CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o.d -o CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals/vanderwaals.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaals_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o -MF CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o.d -o CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/VanDerWaalsPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -P CMakeFiles/VanDerWaals.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_link_script CMakeFiles/VanDerWaals.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/VanDerWaals.a CMakeFiles/VanDerWaals.dir/VanDerWaals_autogen/mocs_compilation.cpp.o CMakeFiles/VanDerWaals.dir/vanderwaals.cpp.o CMakeFiles/VanDerWaals.dir/VanDerWaalsPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/VanDerWaals.a
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/DependInfo.cmake "--color="
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[ 79%] Building CXX object avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/NonCovalentPlugin.cpp.o
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_link_script CMakeFiles/NonCovalent.dir/link.txt --verbose=1
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[ 80%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 80%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o -MF CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o.d -o CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/WireframePlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 81%] Automatic MOC for target OverlayAxes
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenInfo.json Release
AutoGen: Refreshing parse cache because it doesn't exist.
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h", because it doesn't exist.
/usr/bin/g++ -std=c++17 -dM -E -c /usr/share/cmake/Modules/CMakeCXXCompilerABI.cpp -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include
AutoGen: Parsing "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.cpp"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp"
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp", because it doesn't exist, from "SRC:/avogadro/qtplugins/overlayaxes/overlayaxes.h"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.h
AutoMoc: Generating "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc", because it doesn't exist, from "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp"
/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/usr/include/eigen3 -I/usr/include/qt5 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/EWIEGA46WW/moc_overlayaxes.cpp.d"
AutoMoc: Reading dependencies from "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include/OverlayAxesPlugin.moc.d"
AutoMoc: Generating MOC compilation "SRC:/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/mocs_compilation.cpp"
AutoGen: Writing the parse cache file "SRC:/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/ParseCache.txt"
AutoGen: Writing the settings file "SRC:/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenUsed.txt"
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 81%] Built target OverlayAxes_autogen
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 81%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/QTAIMExtension_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 80%] Building CXX object avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/wireframe.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/Wireframe_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/wireframe.cpp.o -MF CMakeFiles/Wireframe.dir/wireframe.cpp.o.d -o CMakeFiles/Wireframe.dir/wireframe.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe/wireframe.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 82%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Wireframe.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -P CMakeFiles/Wireframe.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_link_script CMakeFiles/Wireframe.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Wireframe.a CMakeFiles/Wireframe.dir/Wireframe_autogen/mocs_compilation.cpp.o CMakeFiles/Wireframe.dir/wireframe.cpp.o CMakeFiles/Wireframe.dir/WireframePlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Wireframe.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 82%] Built target Wireframe
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/depend
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[ 82%] Generating qrc_aligntool.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/AlignTool.dir/AlignTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/mocs_compilation.cpp
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[ 81%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimextension.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimextension.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimwavefunction.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimwavefunction.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 82%] Building CXX object avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/aligntool.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/aligntool.cpp.o -MF CMakeFiles/AlignTool.dir/aligntool.cpp.o.d -o CMakeFiles/AlignTool.dir/aligntool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp
In file included from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:6:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h: In constructor ‘Avogadro::QtPlugins::AlignTool::AlignTool(QObject*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:87:20: warning: ‘Avogadro::QtPlugins::AlignTool::m_toolWidget’ will be initialized after [-Wreorder]
   87 |   mutable QWidget* m_toolWidget;
      |                    ^~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:81:26: warning:   ‘Avogadro::Rendering::GLRenderer* Avogadro::QtPlugins::AlignTool::m_renderer’ [-Wreorder]
   81 |   Rendering::GLRenderer* m_renderer;
      |                          ^~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:48:1: warning:   when initialized here [-Wreorder]
   48 | AlignTool::AlignTool(QObject* parent_)
      | ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:85:7: warning: ‘Avogadro::QtPlugins::AlignTool::m_alignType’ will be initialized after [-Wreorder]
   85 |   int m_alignType;
      |       ^~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:84:7: warning:   ‘int Avogadro::QtPlugins::AlignTool::m_axis’ [-Wreorder]
   84 |   int m_axis;
      |       ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:48:1: warning:   when initialized here [-Wreorder]
   48 | AlignTool::AlignTool(QObject* parent_)
      | ^~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘void Avogadro::QtPlugins::AlignTool::alignAtomToAxis(Avogadro::Index, int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:159:11: warning: variable ‘align’ set but not used [-Wunused-but-set-variable]
  159 |   Vector3 align = m_molecule->atom(atomIndex).position3d();
      |           ^~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:163:10: warning: variable ‘alpha’ set but not used [-Wunused-but-set-variable]
  163 |   double alpha, beta, gamma;
      |          ^~~~~
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:14,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:15,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.h:11:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<double, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::AlignTool::shiftAtomToOrigin(unsigned long)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:148:47:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.480643].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::shiftAtomToOrigin(unsigned long)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:148:47: note: ‘<anonymous>’ declared here
  148 |   Core::Array<Vector3> newCoords(coords.size());
      |                                               ^
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<double, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘QVector<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::QVector(int, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/qt5/QtCore/qvector.h:528:13,
    inlined from ‘QVector<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::QVector(int, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/qt5/QtCore/qvector.h:519:1,
    inlined from ‘Avogadro::QtPlugins::AlignTool::draw(Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:272:55:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.482332].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::draw(Avogadro::Rendering::GroupNode&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:272:54: note: ‘<anonymous>’ declared here
  272 |   QVector<Vector3> positions(m_atoms.size(), Vector3());
      |                                                      ^
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<double, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:161:47:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.480668].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:161:47: note: ‘<anonymous>’ declared here
  161 |   Core::Array<Vector3> newCoords(coords.size());
      |                                               ^
In file included from /usr/include/eigen3/Eigen/src/Core/util/ConfigureVectorization.h:346,
                 from /usr/include/eigen3/Eigen/Core:22:
In function ‘_mm_loadu_pd’,
    inlined from ‘Eigen::internal::ploadu<double __vector(2)>(Eigen::internal::unpacket_traits<double __vector(2)>::type const*)double __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/arch/SSE/PacketMath.h:746:22,
    inlined from ‘Eigen::internal::ploadt<double __vector(2), 0>(Eigen::internal::unpacket_traits<double __vector(2)>::type const*)double __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/GenericPacketMath.h:969:26,
    inlined from ‘Eigen::internal::evaluator<Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::packet<0, double __vector(2)>(long, long) constdouble __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:238:42,
    inlined from ‘Eigen::internal::binary_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const>, Eigen::internal::IndexBased, Eigen::internal::IndexBased, double, double>::packet<0, double __vector(2)>(long, long) constdouble __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/CoreEvaluators.h:782:80,
    inlined from ‘Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> >::packetByOuterInner<0, double __vector(2)>(long, long) constdouble __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:386:54,
    inlined from ‘Eigen::internal::redux_vec_unroller<Eigen::internal::scalar_sum_op<double, double>, Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> >, 0, 1>::run<double __vector(2)>(Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> > const&, Eigen::internal::scalar_sum_op<double, double> const&)double __vector(2)’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:177:66,
    inlined from ‘Eigen::internal::redux_impl<Eigen::internal::scalar_sum_op<double, double>, Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> >, 3, 2>::run<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> >(Eigen::internal::redux_evaluator<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> > const&, Eigen::internal::scalar_sum_op<double, double> const&, Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> const&)double’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:344:115,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> >::redux<Eigen::internal::scalar_sum_op<double, double> >(Eigen::internal::scalar_sum_op<double, double> const&) constdouble’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:418:56,
    inlined from ‘Eigen::DenseBase<Eigen::CwiseBinaryOp<Eigen::internal::scalar_conj_product_op<double, double>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const, Eigen::Matrix<double, 3, 1, 0, 3, 1> const> >::sum() const’ at /usr/include/eigen3/Eigen/src/Core/Redux.h:463:25,
    inlined from ‘Eigen::internal::dot_nocheck<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1>, false>::run(Eigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&, Eigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:37:51,
    inlined from ‘Eigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::dot<Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&) constEigen::ScalarBinaryOpTraits<double, Eigen::internal::traits<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::Scalar, Eigen::internal::scalar_product_op<double, Eigen::internal::traits<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::Scalar> >::ReturnType’ at /usr/include/eigen3/Eigen/src/Core/Dot.h:84:58,
    inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:178:22:
/usr/lib/gcc/x86_64-redhat-linux/13/include/emmintrin.h:134:24: warning: ‘MEM[(__m128d_u * {ref-all})&axisVector]’ may be used uninitialized [-Wmaybe-uninitialized]
  134 |   return *(__m128d_u *)__P;
      |                        ^~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:168:11: note: ‘axisVector’ declared here
  168 |   Vector3 axisVector;
      |           ^~~~~~~~~~
In file included from /usr/include/eigen3/Eigen/Geometry:36,
                 from /usr/include/eigen3/Eigen/Dense:6:
In member function ‘Eigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::cross<Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&) constEigen::MatrixBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::cross_product_return_type<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::type’,
    inlined from ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:181:32:
/usr/include/eigen3/Eigen/src/Geometry/OrthoMethods.h:45:61: warning: ‘MEM <double> [(struct DenseStorage *)&axisVector + 16B]’ may be used uninitialized [-Wmaybe-uninitialized]
   45 |     numext::conj(lhs.coeff(1) * rhs.coeff(2) - lhs.coeff(2) * rhs.coeff(1)),
      |                                                ~~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp: In member function ‘Avogadro::QtPlugins::AlignTool::alignAtomToAxis(unsigned long, int)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool/aligntool.cpp:168:11: note: ‘MEM <double> [(struct DenseStorage *)&axisVector + 16B]’ was declared here
  168 |   Vector3 axisVector;
      |           ^~~~~~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o -MF CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o.d -o CMakeFiles/AlignTool.dir/qrc_aligntool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/qrc_aligntool.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o -MF CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o.d -o CMakeFiles/AlignTool.dir/AlignToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/AlignToolPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -MF CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/BondCentric.dir/BondCentric_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/mocs_compilation.cpp
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[ 82%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimwavefunctionevaluator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimwavefunctionevaluator.cpp
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[ 83%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimodeintegrator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp: In member function ‘Avogadro::QtPlugins::QTAIMODEIntegrator::r8_f(double, double*, double*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:267:23: warning: ‘MEM[(double &)&gradient + 16]’ may be used uninitialized [-Wmaybe-uninitialized]
  267 |   yp[2] = gradient(2) / normGradient;
      |           ~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:196:23: note: ‘MEM[(double &)&gradient + 16]’ was declared here
  196 |   Matrix<qreal, 3, 1> gradient;
      |                       ^~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp: In member function ‘Avogadro::QtPlugins::QTAIMODEIntegrator::integrate(QVector3D)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:151:40: warning: ‘abserr’ may be used uninitialized [-Wmaybe-uninitialized]
  151 |     flag = QTAIMODEIntegrator::r8_rkf45(NEQN, y, yp, &t, t_out, &relerr, abserr,
      |            ~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  152 |                                         flag);
      |                                         ~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:53:9: note: ‘abserr’ was declared here
   53 |   qreal abserr;
      |         ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:56:10: warning: ‘n_step’ may be used uninitialized [-Wmaybe-uninitialized]
   56 |   qint64 n_step;
      |          ^~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:145:69: warning: ‘t_stop’ may be used uninitialized [-Wmaybe-uninitialized]
  145 |       ((qreal)(n_step - i_step + 1) * t_start + (qreal)(i_step - 1) * t_stop) /
      |                                                 ~~~~~~~~~~~~~~~~~~~~^~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimodeintegrator.cpp:61:9: note: ‘t_stop’ was declared here
   61 |   qreal t_stop;
      |         ^~~~~~
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/BondCentric_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o -MF CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o.d -o CMakeFiles/BondCentric.dir/bondcentrictool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool/bondcentrictool.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_link_script CMakeFiles/BondCentric.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/lib64/qt5/bin/rcc --name editor --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/qrc_editor.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editor.qrc
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[ 84%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editor.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editor.cpp.o -MF CMakeFiles/Editor.dir/editor.cpp.o.d -o CMakeFiles/Editor.dir/editor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editor.cpp
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[ 84%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editortoolwidget.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/editortoolwidget.cpp.o -MF CMakeFiles/Editor.dir/editortoolwidget.cpp.o.d -o CMakeFiles/Editor.dir/editortoolwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor/editortoolwidget.cpp
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[ 85%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/qrc_editor.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/qrc_editor.cpp.o -MF CMakeFiles/Editor.dir/qrc_editor.cpp.o.d -o CMakeFiles/Editor.dir/qrc_editor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/qrc_editor.cpp
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[ 84%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimlsodaintegrator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp
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/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp: In member function ‘Avogadro::QtPlugins::QTAIMLSODAIntegrator::f(int, double, double*, double*)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp:242:25: warning: ‘MEM[(double &)&gradient + 16]’ may be used uninitialized [-Wmaybe-uninitialized]
  242 |   ydot[3] = gradient(2) / normGradient;
      |             ~~~~~~~~~~~~^~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimlsodaintegrator.cpp:171:23: note: ‘MEM[(double &)&gradient + 16]’ was declared here
  171 |   Matrix<qreal, 3, 1> gradient;
      |                       ^~~~~~~~
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[ 85%] Building CXX object avogadro/qtplugins/editor/CMakeFiles/Editor.dir/EditorPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/Editor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/editor/CMakeFiles/Editor.dir/EditorPlugin.cpp.o -MF CMakeFiles/Editor.dir/EditorPlugin.cpp.o.d -o CMakeFiles/Editor.dir/EditorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/EditorPlugin.cpp
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[ 85%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Editor.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -P CMakeFiles/Editor.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_link_script CMakeFiles/Editor.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Editor.a CMakeFiles/Editor.dir/Editor_autogen/mocs_compilation.cpp.o CMakeFiles/Editor.dir/editor.cpp.o CMakeFiles/Editor.dir/editortoolwidget.cpp.o CMakeFiles/Editor.dir/qrc_editor.cpp.o CMakeFiles/Editor.dir/EditorPlugin.cpp.o
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[ 85%] Built target Editor
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Focus.dir/Focus_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/mocs_compilation.cpp
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[ 85%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o -MF CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/qtaimcubature.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim/qtaimcubature.cpp
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[ 85%] Building CXX object avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtension_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtConcurrent -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o -MF CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o.d -o CMakeFiles/QTAIMExtension.dir/QTAIMExtensionPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/QTAIMExtensionPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_link_script CMakeFiles/QTAIMExtension.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/lib64/qt5/bin/rcc --name label --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/qrc_label.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/label.qrc
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[ 85%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/focus.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/focus.cpp.o -MF CMakeFiles/Focus.dir/focus.cpp.o.d -o CMakeFiles/Focus.dir/focus.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus/focus.cpp
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[ 85%] Building CXX object avogadro/qtplugins/focus/CMakeFiles/Focus.dir/FocusPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/Focus_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/focus/CMakeFiles/Focus.dir/FocusPlugin.cpp.o -MF CMakeFiles/Focus.dir/FocusPlugin.cpp.o.d -o CMakeFiles/Focus.dir/FocusPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/FocusPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -P CMakeFiles/Focus.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_link_script CMakeFiles/Focus.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/ui_manipulatewidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulatewidget.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/lib64/qt5/bin/rcc --name manipulator --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/qrc_manipulator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulator.qrc
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[ 87%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/mocs_compilation.cpp
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[ 87%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/labeleditor.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/labeleditor.cpp.o -MF CMakeFiles/LabelEditor.dir/labeleditor.cpp.o.d -o CMakeFiles/LabelEditor.dir/labeleditor.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label/labeleditor.cpp
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[ 87%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/qrc_label.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/qrc_label.cpp.o -MF CMakeFiles/LabelEditor.dir/qrc_label.cpp.o.d -o CMakeFiles/LabelEditor.dir/qrc_label.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/qrc_label.cpp
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[ 88%] Building CXX object avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditor_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o -MF CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o.d -o CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/LabelEditorPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -P CMakeFiles/LabelEditor.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_link_script CMakeFiles/LabelEditor.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/LabelEditor.a CMakeFiles/LabelEditor.dir/LabelEditor_autogen/mocs_compilation.cpp.o CMakeFiles/LabelEditor.dir/labeleditor.cpp.o CMakeFiles/LabelEditor.dir/qrc_label.cpp.o CMakeFiles/LabelEditor.dir/LabelEditorPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/LabelEditor.a
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[ 89%] Generating qrc_measuretool.cpp
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/lib64/qt5/bin/rcc --name measuretool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/qrc_measuretool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.qrc
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[ 87%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/manipulator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/manipulator.cpp.o -MF CMakeFiles/Manipulator.dir/manipulator.cpp.o.d -o CMakeFiles/Manipulator.dir/manipulator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator/manipulator.cpp
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[ 89%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/MeasureTool.dir/MeasureTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/mocs_compilation.cpp
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[ 89%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o -MF CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o.d -o CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/qrc_manipulator.cpp
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[ 89%] Building CXX object avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/Manipulator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o -MF CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o.d -o CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/ManipulatorPlugin.cpp
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[ 89%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Manipulator.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -P CMakeFiles/Manipulator.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_link_script CMakeFiles/Manipulator.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Manipulator.a CMakeFiles/Manipulator.dir/Manipulator_autogen/mocs_compilation.cpp.o CMakeFiles/Manipulator.dir/manipulator.cpp.o CMakeFiles/Manipulator.dir/qrc_manipulator.cpp.o CMakeFiles/Manipulator.dir/ManipulatorPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Manipulator.a
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[ 89%] Built target Manipulator
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/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/depend
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[ 89%] Generating qrc_navigator.cpp
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/lib64/qt5/bin/rcc --name navigator --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/qrc_navigator.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator/navigator.qrc
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/DependInfo.cmake "--color="
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[ 90%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 89%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/measuretool.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/measuretool.cpp.o -MF CMakeFiles/MeasureTool.dir/measuretool.cpp.o.d -o CMakeFiles/MeasureTool.dir/measuretool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp:11:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<double, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘QVector<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::QVector(int, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/qt5/QtCore/qvector.h:528:13,
    inlined from ‘QVector<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::QVector(int, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/qt5/QtCore/qvector.h:519:1,
    inlined from ‘Avogadro::QtPlugins::MeasureTool::draw(Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp:157:55:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.476416].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp: In member function ‘Avogadro::QtPlugins::MeasureTool::draw(Avogadro::Rendering::GroupNode&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool/measuretool.cpp:157:54: note: ‘<anonymous>’ declared here
  157 |   QVector<Vector3> positions(m_atoms.size(), Vector3());
      |                                                      ^
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o -MF CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o.d -o CMakeFiles/MeasureTool.dir/qrc_measuretool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/qrc_measuretool.cpp
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[ 90%] Building CXX object avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o -MF CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o.d -o CMakeFiles/MeasureTool.dir/MeasureToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/MeasureToolPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -P CMakeFiles/MeasureTool.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_link_script CMakeFiles/MeasureTool.dir/link.txt --verbose=1
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/lib64/qt5/bin/rcc --name playertool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/qrc_playertool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool/playertool.qrc
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[ 90%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o -MF CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/mocs_compilation.cpp
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[ 90%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/navigator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/navigator.cpp.o -MF CMakeFiles/Navigator.dir/navigator.cpp.o.d -o CMakeFiles/Navigator.dir/navigator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator/navigator.cpp
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[ 91%] Building CXX object avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/qrc_navigator.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/qrc_navigator.cpp.o -MF CMakeFiles/Navigator.dir/qrc_navigator.cpp.o.d -o CMakeFiles/Navigator.dir/qrc_navigator.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/qrc_navigator.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/Navigator_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o -MF CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o.d -o CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/NavigatorPlugin.cpp
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[ 91%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Navigator.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -P CMakeFiles/Navigator.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_link_script CMakeFiles/Navigator.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Navigator.a CMakeFiles/Navigator.dir/Navigator_autogen/mocs_compilation.cpp.o CMakeFiles/Navigator.dir/navigator.cpp.o CMakeFiles/Navigator.dir/qrc_navigator.cpp.o CMakeFiles/Navigator.dir/NavigatorPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Navigator.a
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[ 91%] Built target Navigator
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[ 91%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/playertool.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/playertool.cpp.o -MF CMakeFiles/PlayerTool.dir/playertool.cpp.o.d -o CMakeFiles/PlayerTool.dir/playertool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool/playertool.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o -MF CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o.d -o CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/qrc_playertool.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o -MF CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/ResetView.dir/ResetView_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/ResetView_autogen/mocs_compilation.cpp
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[ 91%] Building CXX object avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerTool_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o -MF CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o.d -o CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/PlayerToolPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -P CMakeFiles/PlayerTool.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_link_script CMakeFiles/PlayerTool.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/PlayerTool.a CMakeFiles/PlayerTool.dir/PlayerTool_autogen/mocs_compilation.cpp.o CMakeFiles/PlayerTool.dir/playertool.cpp.o CMakeFiles/PlayerTool.dir/qrc_playertool.cpp.o CMakeFiles/PlayerTool.dir/PlayerToolPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/PlayerTool.a
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/usr/bin/make  -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/ui_selectiontoolwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.ui
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.ui: Warning: The name 'label' (QLabel) is already in use, defaulting to 'label1'.
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/lib64/qt5/bin/rcc --name selectiontool --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.qrc
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/DependInfo.cmake "--color="
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[ 91%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 91%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontool.cpp.o -MF CMakeFiles/Selection.dir/selectiontool.cpp.o.d -o CMakeFiles/Selection.dir/selectiontool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.h:13,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::SelectionTool::draw(Avogadro::Rendering::GroupNode&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp:203:26:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.481547].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp: In member function ‘Avogadro::QtPlugins::SelectionTool::draw(Avogadro::Rendering::GroupNode&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontool.cpp:203:26: note: ‘<anonymous>’ declared here
  203 |   Array<Vector3f> verts(4);
      |                          ^
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o -MF CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o.d -o CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp: In member function ‘void Avogadro::QtPlugins::SelectionToolWidget::setDropDown(size_t, size_t)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool/selectiontoolwidget.cpp:36:15: warning: comparison of integer expressions of different signedness: ‘size_t’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
   36 |   if (current != m_ui->changeLayerDropDown->currentIndex())
      |       ~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
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[ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -MF CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o.d -o CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/qrc_selectiontool.cpp
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[ 92%] Building CXX object avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/Selection_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -MF CMakeFiles/Selection.dir/SelectionPlugin.cpp.o.d -o CMakeFiles/Selection.dir/SelectionPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/SelectionPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -P CMakeFiles/Selection.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_link_script CMakeFiles/Selection.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Selection.a CMakeFiles/Selection.dir/Selection_autogen/mocs_compilation.cpp.o CMakeFiles/Selection.dir/selectiontool.cpp.o CMakeFiles/Selection.dir/selectiontoolwidget.cpp.o CMakeFiles/Selection.dir/qrc_selectiontool.cpp.o CMakeFiles/Selection.dir/SelectionPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Selection.a
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[ 93%] Generating ui_surfacedialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/ui_surfacedialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfacedialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/mocs_compilation.cpp
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 94%] Building CXX object avogadro/qtplugins/svg/CMakeFiles/SVG.dir/svg.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtSvg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/svg.cpp.o -MF CMakeFiles/SVG.dir/svg.cpp.o.d -o CMakeFiles/SVG.dir/svg.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Geometry:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.h:9,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘Avogadro::QtPlugins::SVG::SVGAtom::SVGAtom(Avogadro::QtPlugins::SVG::SVGAtom const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.h:47:10,
    inlined from ‘std::__new_allocator<Avogadro::QtPlugins::SVG::SVGAtom>::construct<Avogadro::QtPlugins::SVG::SVGAtom, Avogadro::QtPlugins::SVG::SVGAtom const&>(Avogadro::QtPlugins::SVG::SVGAtom*, Avogadro::QtPlugins::SVG::SVGAtom const&)void’ at /usr/include/c++/13/bits/new_allocator.h:191:4,
    inlined from ‘std::allocator_traits<std::allocator<Avogadro::QtPlugins::SVG::SVGAtom> >::construct<Avogadro::QtPlugins::SVG::SVGAtom, Avogadro::QtPlugins::SVG::SVGAtom const&>(std::allocator<Avogadro::QtPlugins::SVG::SVGAtom>&, Avogadro::QtPlugins::SVG::SVGAtom*, Avogadro::QtPlugins::SVG::SVGAtom const&)void’ at /usr/include/c++/13/bits/alloc_traits.h:538:17,
    inlined from ‘std::vector<Avogadro::QtPlugins::SVG::SVGAtom, std::allocator<Avogadro::QtPlugins::SVG::SVGAtom> >::push_back(Avogadro::QtPlugins::SVG::SVGAtom const&)’ at /usr/include/c++/13/bits/stl_vector.h:1283:30,
    inlined from ‘Avogadro::QtPlugins::SVG::getPositions()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp:154:22:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&atom + 24].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp: In member function ‘Avogadro::QtPlugins::SVG::getPositions()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg/svg.cpp:152:13: note: ‘atom’ declared here
  152 |     SVGAtom atom(atomPositions[i].cast<float>(), pos, i,
      |             ^~~~
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/surfaces.cpp.o -MF CMakeFiles/Surfaces.dir/surfaces.cpp.o.d -o CMakeFiles/Surfaces.dir/surfaces.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/matrix.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.h:12,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp:19:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<double, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1>, Eigen::Matrix<double, 3, 1, 0, 3, 1> >(Eigen::Matrix<double, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> >&)Eigen::Matrix<double, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<double, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<double, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<double, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<double, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::Surfaces::colorMeshByPotential()’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp:776:51:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.512630].m_storage’ may be used uninitialized [-Wmaybe-uninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp: In member function ‘Avogadro::QtPlugins::Surfaces::colorMeshByPotential()’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces/surfaces.cpp:776:51: note: ‘<anonymous>’ declared here
  776 |   Core::Array<Vector3> positions(positionsf.size());
      |                                                   ^
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 94%] Building CXX object avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/g++ -DQT_CONCURRENT_LIB -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/Surfaces_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -isystem /usr/include/qt5/QtConcurrent -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/gif-h -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/tinycolormap/include -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -MF CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o.d -o CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/SurfacesPlugin.cpp
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 95%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Surfaces.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -P CMakeFiles/Surfaces.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_link_script CMakeFiles/Surfaces.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Surfaces.a CMakeFiles/Surfaces.dir/Surfaces_autogen/mocs_compilation.cpp.o CMakeFiles/Surfaces.dir/gaussiansetconcurrent.cpp.o CMakeFiles/Surfaces.dir/slatersetconcurrent.cpp.o CMakeFiles/Surfaces.dir/surfacedialog.cpp.o CMakeFiles/Surfaces.dir/surfaces.cpp.o CMakeFiles/Surfaces.dir/SurfacesPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Surfaces.a
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[ 95%] Built target Surfaces
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[ 95%] Generating ui_templatetoolwidget.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/ui_templatetoolwidget.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/templatetoolwidget.ui
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[ 95%] Generating qrc_template.cpp
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/lib64/qt5/bin/rcc --name template --output /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/qrc_template.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool/template.qrc
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_SVG_LIB -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVG_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtSvg -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/svg/CMakeFiles/SVG.dir/SVGPlugin.cpp.o -MF CMakeFiles/SVG.dir/SVGPlugin.cpp.o.d -o CMakeFiles/SVG.dir/SVGPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/SVGPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbs.cpp.o -MF CMakeFiles/apbs.dir/apbs.cpp.o.d -o CMakeFiles/apbs.dir/apbs.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbs.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsdialog.cpp.o -MF CMakeFiles/apbs.dir/apbsdialog.cpp.o.d -o CMakeFiles/apbs.dir/apbsdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsdialog.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o -MF CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o.d -o CMakeFiles/apbs.dir/apbsoutputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/apbsoutputdialog.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/opendxreader.cpp.o -MF CMakeFiles/apbs.dir/opendxreader.cpp.o.d -o CMakeFiles/apbs.dir/opendxreader.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs/opendxreader.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbs_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/apbsPlugin.cpp.o -MF CMakeFiles/apbs.dir/apbsPlugin.cpp.o.d -o CMakeFiles/apbs.dir/apbsPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/apbsPlugin.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/mocs_compilation.cpp
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[ 97%] Linking CXX static library ../../../lib/avogadro2/staticplugins/TemplateTool.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -P CMakeFiles/TemplateTool.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_link_script CMakeFiles/TemplateTool.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/TemplateTool.a CMakeFiles/TemplateTool.dir/TemplateTool_autogen/mocs_compilation.cpp.o CMakeFiles/TemplateTool.dir/templatetool.cpp.o CMakeFiles/TemplateTool.dir/templatetoolwidget.cpp.o CMakeFiles/TemplateTool.dir/qrc_template.cpp.o CMakeFiles/TemplateTool.dir/TemplateToolPlugin.cpp.o
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[ 98%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o -MF CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o.d -o CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinput.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 98%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o -MF CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o.d -o CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInputPlugin.cpp
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[ 98%] Generating ui_gamessinputdialog.h
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/lib64/qt5/bin/uic -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/ui_gamessinputdialog.h /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.ui
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/DependInfo.cmake "--color="
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/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 98%] Building CXX object avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/mocs_compilation.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 97%] Building CXX object avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/Cp2kInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o -MF CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o.d -o CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 98%] Linking CXX static library ../../../lib/avogadro2/staticplugins/Cp2kInput.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -P CMakeFiles/Cp2kInput.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/Cp2kInput.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/Cp2kInput.a CMakeFiles/Cp2kInput.dir/Cp2kInput_autogen/mocs_compilation.cpp.o CMakeFiles/Cp2kInput.dir/cp2kinputdialog.cpp.o CMakeFiles/Cp2kInput.dir/cp2kinput.cpp.o CMakeFiles/Cp2kInput.dir/Cp2kInputPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/Cp2kInput.a
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[ 98%] Built target Cp2kInput
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/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QuantumInput.dir/QuantumInput_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/QuantumInput_autogen/mocs_compilation.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NETWORK_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInput_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/qt5/QtNetwork -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -MF CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o.d -o CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/GamessInputPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/GamessInput.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -P CMakeFiles/GamessInput.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_link_script CMakeFiles/GamessInput.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/GamessInput.a CMakeFiles/GamessInput.dir/GamessInput_autogen/mocs_compilation.cpp.o CMakeFiles/GamessInput.dir/gamessinputdialog.cpp.o CMakeFiles/GamessInput.dir/gamesshighlighter.cpp.o CMakeFiles/GamessInput.dir/gamessinput.cpp.o CMakeFiles/GamessInput.dir/GamessInputPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/GamessInput.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Built target GamessInput
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o -MF CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o.d -o CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxesPlugin.cpp
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Building CXX object avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_STATICPLUGIN -DQT_WIDGETS_LIB -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/OverlayAxes_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl -isystem /usr/include/eigen3 -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o -MF CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o.d -o CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp
In file included from /usr/include/eigen3/Eigen/Core:294,
                 from /usr/include/eigen3/Eigen/Dense:1,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:11,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:14,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:15,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.h:10,
                 from /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:6:
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:145:39:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.466536].m_storage’ is used uninitialized [-Wuninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp: In member function ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:145:39: note: ‘<anonymous>’ declared here
  145 |   Array<Vector3f> vertices(numVertices);
      |                                       ^
In member function ‘Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::PlainObjectBase(Eigen::PlainObjectBase<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’,
    inlined from ‘Eigen::Matrix<float, 3, 1, 0, 3, 1>::Matrix(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/eigen3/Eigen/src/Core/Matrix.h:414:65,
    inlined from ‘std::_Construct<Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&>(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)void’ at /usr/include/c++/13/bits/stl_construct.h:119:7,
    inlined from ‘std::__do_uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:267:21,
    inlined from ‘std::__uninitialized_fill_n<false>::__uninit_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:284:34,
    inlined from ‘std::uninitialized_fill_n<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:327:17,
    inlined from ‘std::__uninitialized_fill_n_a<Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1>, Eigen::Matrix<float, 3, 1, 0, 3, 1> >(Eigen::Matrix<float, 3, 1, 0, 3, 1>*, unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> >&)Eigen::Matrix<float, 3, 1, 0, 3, 1>*’ at /usr/include/c++/13/bits/stl_uninitialized.h:472:39,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::_M_fill_initialize(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /usr/include/c++/13/bits/stl_vector.h:1704:33,
    inlined from ‘std::vector<Eigen::Matrix<float, 3, 1, 0, 3, 1>, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > >::vector(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, std::allocator<Eigen::Matrix<float, 3, 1, 0, 3, 1> > const&)’ at /usr/include/c++/13/bits/stl_vector.h:569:27,
    inlined from ‘Avogadro::Core::internal::ArrayRefContainer<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::ArrayRefContainer(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:46:17,
    inlined from ‘Avogadro::Core::Array<Eigen::Matrix<float, 3, 1, 0, 3, 1> >::Array(unsigned long, Eigen::Matrix<float, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:120:9,
    inlined from ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’ at /builddir/build/BUILD/avmake[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
ogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:146:38:
/usr/include/eigen3/Eigen/src/Core/PlainObjectBase.h:512:17: warning: ‘MEM[(const struct PlainObjectBase &)&D.466538].m_storage’ is used uninitialized [-Wuninitialized]
  512 |       : Base(), m_storage(other.m_storage) { }
      |                 ^~~~~~~~~~~~~~~~~~~~~~~~~~
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp: In member function ‘Avogadro::QtPlugins::OverlayAxes::RenderImpl::addAxis(Eigen::Matrix<float, 3, 1, 0, 3, 1> const&, Eigen::Matrix<unsigned char, 3, 1, 0, 3, 1> const&)’:
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes/overlayaxes.cpp:146:38: note: ‘<anonymous>’ declared here
  146 |   Array<Vector3f> normals(numVertices);
      |                                      ^
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Linking CXX static library ../../../lib/avogadro2/staticplugins/OverlayAxes.a
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -P CMakeFiles/OverlayAxes.dir/cmake_clean_target.cmake
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_link_script CMakeFiles/OverlayAxes.dir/link.txt --verbose=1
/usr/bin/ar qc ../../../lib/avogadro2/staticplugins/OverlayAxes.a CMakeFiles/OverlayAxes.dir/OverlayAxes_autogen/mocs_compilation.cpp.o CMakeFiles/OverlayAxes.dir/overlayaxes.cpp.o CMakeFiles/OverlayAxes.dir/OverlayAxesPlugin.cpp.o
/usr/bin/ranlib ../../../lib/avogadro2/staticplugins/OverlayAxes.a
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Built target OverlayAxes
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Automatic MOC for target QtPlugins
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AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginfactory.h"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/avogadroqtpluginsexport.h"
AutoGen: Parsing "SRC:/avogadro/qtplugins/pluginmanager.h"
AutoGen: Parsing "SRC:/build/avogadro/qtplugins/avogadrostaticqtplugins.h"
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/usr/lib64/qt5/bin/moc -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -I/usr/include/qt5 -I/usr/include/qt5/QtCore -I/usr/lib64/qt5/mkspecs/linux-g++ -I/usr/include/eigen3 -I/usr/include/qt5/QtWidgets -I/usr/include/qt5/QtGui -I/builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -I/usr/include/c++/13 -I/usr/include/c++/13/x86_64-redhat-linux -I/usr/include/c++/13/backward -I/usr/lib/gcc/x86_64-redhat-linux/13/include -I/usr/local/include -I/usr/include --include /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/moc_predefs.h --output-dep-file -o /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/EWIEGA46WW/moc_pluginmanager.cpp /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/pluginmanager.h
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/eigen3 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o -MF CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o.d -o CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/mocs_compilation.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/g++ -DQT_CORE_LIB -DQT_GUI_LIB -DQT_NO_DEBUG -DQT_WIDGETS_LIB -DQtPlugins_EXPORTS -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/QtPlugins_autogen/include -I/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro -I/builddir/build/BUILD/avogadrolibs-1.98.1 -I/builddir/build/BUILD/avogadrolibs-1.98.1/build -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core -I/builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc -isystem /usr/include/qt5 -isystem /usr/include/qt5/QtCore -isystem /usr/lib64/qt5/mkspecs/linux-g++ -isystem /usr/include/eigen3 -isystem /usr/include/qt5/QtWidgets -isystem /usr/include/qt5/QtGui -isystem /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -std=c++17 -fPIC -fvisibility=hidden -fvisibility-inlines-hidden -fPIC -MD -MT avogadro/qtplugins/CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -MF CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o.d -o CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o -c /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/pluginmanager.cpp
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_link_script CMakeFiles/QtPlugins.dir/link.txt --verbose=1
/usr/bin/g++ -fPIC -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wno-complain-wrong-lang -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -DH5_USE_110_API -Wno-deprecated-declarations -O2 -DNDEBUG -Wl,--fatal-warnings -Wl,--no-undefined -lc -Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -shared -Wl,-soname,libAvogadroQtPlugins.so.1 -o ../../lib/libAvogadroQtPlugins.so.1.98.1 CMakeFiles/QtPlugins.dir/QtPlugins_autogen/mocs_compilation.cpp.o CMakeFiles/QtPlugins.dir/pluginmanager.cpp.o  -Wl,-rpath,/builddir/build/BUILD/avogadrolibs-1.98.1/build/lib: ../../lib/avogadro2/staticplugins/ThreeDMol.a ../../lib/avogadro2/staticplugins/ApplyColors.a ../../lib/avogadro2/staticplugins/AlignTool.a ../../lib/avogadro2/staticplugins/BondCentric.a ../../lib/avogadro2/staticplugins/Bonding.a ../../lib/avogadro2/staticplugins/Cartoons.a ../../lib/avogadro2/staticplugins/Centroid.a ../../lib/avogadro2/staticplugins/CopyPaste.a ../../lib/avogadro2/staticplugins/Crystal.a ../../lib/avogadro2/staticplugins/CrystalScene.a ../../lib/avogadro2/staticplugins/CustomElements.a ../../lib/avogadro2/staticplugins/Editor.a ../../lib/avogadro2/staticplugins/FetchPDB.a ../../lib/avogadro2/staticplugins/Focus.a ../../lib/avogadro2/staticplugins/Forcefield.a ../../lib/avogadro2/staticplugins/Hydrogens.a ../../lib/avogadro2/staticplugins/ImportPQR.a ../../lib/avogadro2/staticplugins/NucleicInput.a ../../lib/avogadro2/staticplugins/Label.a ../../lib/avogadro2/staticplugins/LabelEditor.a ../../lib/avogadro2/staticplugins/LineFormatInput.a ../../lib/avogadro2/staticplugins/Manipulator.a ../../lib/avogadro2/staticplugins/MeasureTool.a ../../lib/avogadro2/staticplugins/Navigator.a ../../lib/avogadro2/staticplugins/NetworkDatabases.a ../../lib/avogadro2/staticplugins/OpenBabel.a ../../lib/avogadro2/staticplugins/PlayerTool.a ../../lib/avogadro2/staticplugins/PLY.a ../../lib/avogadro2/staticplugins/POVRay.a ../../lib/avogadro2/staticplugins/PropertyTables.a ../../lib/avogadro2/staticplugins/ResetView.a ../../lib/avogadro2/staticplugins/Select.a ../../lib/avogadro2/staticplugins/Selection.a ../../lib/avogadro2/staticplugins/SpaceGroup.a ../../lib/avogadro2/staticplugins/Surfaces.a ../../lib/avogadro2/staticplugins/LammpsInput.a ../../lib/avogadro2/staticplugins/OpenMMInput.a ../../lib/avogadro2/staticplugins/CoordinateEditor.a ../../lib/avogadro2/staticplugins/InsertFragment.a ../../lib/avogadro2/staticplugins/MolecularProperties.a ../../lib/avogadro2/staticplugins/SVG.a ../../lib/avogadro2/staticplugins/Spectra.a ../../lib/avogadro2/staticplugins/TemplateTool.a ../../lib/avogadro2/staticplugins/VRML.a ../../lib/avogadro2/staticplugins/apbs.a ../../lib/avogadro2/staticplugins/Cp2kInput.a ../../lib/avogadro2/staticplugins/GamessInput.a ../../lib/avogadro2/staticplugins/commands.a ../../lib/avogadro2/staticplugins/QuantumInput.a ../../lib/avogadro2/staticplugins/ScriptCharges.a ../../lib/avogadro2/staticplugins/ScriptFileFormats.a ../../lib/avogadro2/staticplugins/PluginDownloader.a ../../lib/avogadro2/staticplugins/BallStick.a ../../lib/avogadro2/staticplugins/CloseContacts.a ../../lib/avogadro2/staticplugins/Force.a ../../lib/avogadro2/staticplugins/Licorice.a ../../lib/avogadro2/staticplugins/Meshes.a ../../lib/avogadro2/staticplugins/NonCovalent.a ../../lib/avogadro2/staticplugins/VanDerWaals.a ../../lib/avogadro2/staticplugins/Wireframe.a ../../lib/avogadro2/staticplugins/OverlayAxes.a ../../lib/avogadro2/staticplugins/QTAIMExtension.a ../../lib/avogadro2/staticplugins/QTAIMScenePlugin.a ../../lib/libAvogadroCalc.so.1.98.1 ../../thirdparty/libgwavi/libgwavi.a /usr/lib64/libQt5Svg.so.5.15.11 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 ../../lib/libAvogadroMoleQueue.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../../lib/libAvogadroQuantumIO.so.1.98.1 /usr/lib64/libQt5Network.so.5.15.11 /usr/lib64/libarchive.so ../../lib/libAvogadroQtOpenGL.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 /usr/lib64/libGLX.so /usr/lib64/libOpenGL.so /usr/lib64/libGLEW.so /usr/lib64/libQt5Concurrent.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../../lib/libAvogadroQtGui.so.1.98.1 ../../lib/libAvogadroIO.so.1.98.1 /usr/lib64/libQt5Widgets.so.5.15.11 /usr/lib64/libQt5Gui.so.5.15.11 /usr/lib64/libQt5Core.so.5.15.11 ../../lib/libAvogadroRendering.so.1.98.1 ../../lib/libAvogadroCore.so.1.98.1 
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_symlink_library ../../lib/libAvogadroQtPlugins.so.1.98.1 ../../lib/libAvogadroQtPlugins.so.1 ../../lib/libAvogadroQtPlugins.so
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:61: warning: type ‘Avogadro::QtPlugins::BasisOption’ violates the C++ One Definition Rule [-Wodr]
   61 | enum BasisOption
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:59: note: an enum with different value name is defined in another translation unit
   59 | enum BasisOption
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:63: note: name ‘BasisSZVGTH’ differs from name ‘BasisSTO3G’ defined in another translation unit
   63 |   BasisSZVGTH = 0,
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:61: note: mismatching definition
   61 |   BasisSTO3G = 0,
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:40: warning: type ‘Avogadro::QtPlugins::CalculateOption’ violates the C++ One Definition Rule [-Wodr]
   40 | enum CalculateOption
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:37: note: an enum with different value name is defined in another translation unit
   37 | enum CalculateOption
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput/cp2kinputdialog.cpp:42: note: name ‘CalculateEnergy’ differs from name ‘CalculateSinglePoint’ defined in another translation unit
   42 |   CalculateEnergy = 0,
      | 
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput/gamessinputdialog.cpp:39: note: mismatching definition
   39 |   CalculateSinglePoint = 0,
      | 
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[100%] Built target QtPlugins
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make: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles 0
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~/build/BUILD/avogadrolibs-1.98.1/build/docs ~/build/BUILD/avogadrolibs-1.98.1
+ pushd build/docs
+ doxygen
warning: Tag 'OUTPUT_TEXT_DIRECTION' at line 102 of file 'doxyfile' has become obsolete.
         To avoid this warning please remove this line from your configuration file or upgrade it using "doxygen -u"
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warning: argument 'a4wide' for option PAPER_TYPE is not a valid enum value
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Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacewidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictableview.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/utilities.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/utilities.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/viewfactory.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/viewfactory.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/activeobjects.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/qttextrenderstrategy.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/qttextrenderstrategy.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessus.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessus.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemjson.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcsector.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arcstrip.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrogl.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrogl.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrorendering.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/avogadrorendering.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/g/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:77: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:84: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:91: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:103: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:110: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:117: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:124: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:131: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:138: warning: unbalanced grouping commands
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:116: warning: unbalanced grouping commands
lrendervisitor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quad.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/quadoutline.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel2d.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel2d.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel3d.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabel3d.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textrenderstrategy.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textrenderstrategy.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogad/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h:24: warning: Compound Avogadro::Calc::EnergyCalculator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:21: warning: Compound Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:23: warning: Compound Avogadro::Core::AngleIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:59: warning: Compound Avogadro::Core::ArraySet::Holder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:48: warning: Compound Avogadro::Core::ArraySet::PlaceHolder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:47: warning: Compound Avogadro::Core::AtomTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomutilities.h:22: warning: Compound Avogadro::Core::AtomUtilities is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:23: warning: Compound Avogadro::Core::BondTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:23: warning: Compound Avogadro::Core::DihedralIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:88: warning: Compound Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:11: warning: Compound Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:19: warning: Compound Avogadro::Core::RingPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:36: warning: Compound Avogadro::Core::SecondaryStructureAssigner is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:22: warning: Compound Avogadro::Core::hBondRecord is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:22: warning: Compound Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:32: warning: Compound Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/lammpsformat.h:57: warning: Compound Avogadro::Io::LammpsDataFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/vaspformat.h:51: warning: Compound Avogadro::Io::OutcarFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementdetail_p.h:24: warning: Compound Avogadro::QtGui::ElementDetail is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/elementitem_p.h:24: warning: Compound Avogadro::QtGui::ElementItem is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:20: warning: Compound Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h:21: warning: Compound Avogadro::QtGui::HydrogenTools is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:19: warning: Compound Avogadro::QtGui::MoleculeSystem is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/periodictablescene_p.h:25: warning: Compound Avogadro::QtGui::PeriodicTableScene is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:671: warning: Compound Avogadro::QtGui::RWAtom is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:678: warning: Compound Avogadro::QtGui::RWBond is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:27: warning: Compound Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:37: warning: Compound Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessus.h:18: warning: Compound Avogadro::QuantumIO::GAMESSUSOutput is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:77: warning: Compound Avogadro::QuantumIO::GamessukOut is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussiancube.h:17: warning: Compound Avogadro::QuantumIO::GaussianCube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h:20: warning: Compound Avogadro::QuantumIO::GaussianFchk is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/genericoutput.h:18: warning: Compound Avogadro::QuantumIO::GenericOutput is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/molden.h:18: warning: Compound Avogadro::QuantumIO::MoldenFile is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h:19: warning: Compound Avogadro::QuantumIO::MopacAux is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h:19: warning: Compound Avogadro::QuantumIO::NWChemLog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/orca.h:20: warning: Compound Avogadro::QuantumIO::ORCAOutput is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:14: warning: Compound Avogadro::Rendering::BSplineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h:14: warning: Compound Avogadro::Rendering::BezierGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:25: warning: Compound Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:64: warning: Compound Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:112: warning: Compound Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:16: warning: Compound Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:25: warning: Compound Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:26: warning: Compound Avogadro::Rendering::EigenData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:35: warning: Compound Avogadro::Rendering::GroupNode::NodeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:38: warning: Compound Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:25: warning: Compound Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:25: warning: Compound Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:28: warning: Compound Avogadro::Rendering::Point is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:42: warning: Compound Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:21: warning: Compound Avogadro::Rendering::ShaderInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:12: warning: Compound Avogadro::Rendering::SolidPipeline is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:92: warning: Compound Avogadro::Rendering::Sphere is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:17: warning: Compound Avogadro::Rendering::SphereColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:26: warning: Compound Avogadro::TypeTraits is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:37: warning: Compound Avogadro::TypeTraits< char > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:114: warning: Compound Avogadro::TypeTraits< double > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:103: warning: Compound Avogadro::TypeTraits< float > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:81: warning: Compound Avogadro::TypeTraits< int > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:59: warning: Compound Avogadro::TypeTraits< short > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:48: warning: Compound Avogadro::TypeTraits< unsigned char > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:92: warning: Compound Avogadro::TypeTraits< unsigned int > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:70: warning: Compound Avogadro::TypeTraits< unsigned short > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:14: warning: Compound Avogadro::VTK::ChartDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:24: warning: Compound Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h:14: warning: Compound Avogadro::VTK::QVTKWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h:38: warning: Compound Avogadro::VTK::vtkGLWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:217: warning: no matching class member found for 
  template < Molecule_T >
  BondTemplate< Molecule_T >::AtomType getOtherAtom(Avogadro::Core::BondTemplate< Molecule_T >::Molecule_T::AtomType atom) const
Possible candidates:
  'AtomType BondTemplate< Molecule_T >::getOtherAtom(Index index) const' at line 99 of file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h
  'AtomType BondTemplate< Molecule_T >::getOtherAtom(AtomType atom) const' at line 104 of file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:35: warning: Member override (variable) of class vtkAvogadroActor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:62: warning: Member m_scene (variable) of class vtkAvogadroActor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:63: warning: Member m_bounds[6] (variable) of class vtkAvogadroActor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h:65: warning: Member m_initialized (variable) of class vtkAvogadroActor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:32: warning: Member points[8] (variable) of struct Avogadro::Frustrum is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/vector.h:33: warning: Member planes[4] (variable) of struct Avogadro::Frustrum is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:33: warning: Member name() (function) of class Avogadro::TypeTraits is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:44: warning: Member name() (function) of class Avogadro::TypeTraits< char > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:121: warning: Member name() (function) of class Avogadro::TypeTraits< double > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:110: warning: Member name() (function) of class Avogadro::TypeTraits< float > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:88: warning: Member name() (function) of class Avogadro::TypeTraits< int > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:66: warning: Member name() (function) of class Avogadro::TypeTraits< short > is not documented.
ro/rendering/volumegeometry.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/volumegeometry.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkAvogadroActor.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h...
Preprocessing /builddir/build/BUILD/avogadrolibs-1.98.1/docs/mainpage.dox...
Parsing file /builddir/build/BUILD/avogadrolibs-1.98.1/docs/mainpage.dox...
Building macro definition list...
Building group list...
Building directory list...
Building namespace list...
Building file list...
Building class list...
Building concept list...
Computing nesting relations for classes...
Associating documentation with classes...
Associating documentation with concepts...
Associating documentation with modules...
Building example list...
Searching for enumerations...
Searching for documented typedefs...
Searching for members imported via using declarations...
Searching for included using directives...
Searching for documented variables...
Building interface member list...
Building member list...
Searching for friends...
Searching for documented defines...
Computing class inheritance relations...
Computing class usage relations...
Flushing cached template relations that have become invalid...
Computing class relations...
Add enum values to enums...
Searching for member function documentation...
Creating members for template instances...
Building page list...
Search for main page...
Computing page relations...
Determining the scope of groups...
Computing module relations...
Sorting lists...
Determining which enums are documented
Computing member relations...
Building full member lists recursively...
Adding members to member groups.
Distributing member group documentation.
Computing member references...
Inheriting documentation...
Generating disk names...
Adding source references...
Adding xrefitems...
Sorting member lists...
Setting anonymous enum type...
Computing dependencies between directories...
Generating citations page...
Counting members...
Counting data structures...
Resolving user defined references...
Finding anchors and sections in the documentation...
Transferring function references...
Combining using relations...
Adding members to index pages...
Correcting members for VHDL...
Computing tooltip texts...
Generating style sheet...
Generating search indices...
Generating example documentation...
Generating file sources...
Generating file documentation...
Generating page documentation...
Generating group documentation...
Generating class documentation...
Generating docs for compound vtkAvogadroActor...
Generating concept documentation...
Generating module documentation...
Generating namespace documentation...
Generating docs for compound Avogadro::Frustrum...
Generating docs for compound Avogadro::TypeTraits...
Generating docs for compound Avogadro::TypeTraits< char >...
Generating docs for compound Avogadro::TypeTraits< double >...
Generating docs for compound Avogadro::TypeTraits< float >...
Generating docs for compound Avogadro::TypeTraits< int >...
Generating docs for compound Avogadro::TypeTraits< short >...
Generating docs for compound Avogadro::TypeTraits< unsigned char /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:55: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned char > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:99: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned int > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/types.h:77: warning: Member name() (function) of class Avogadro::TypeTraits< unsigned short > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemanager.h:97: warning: Member nameForModel(const std::string &identifier) const (function) of class Avogadro::Calc::ChargeManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:83: warning: Member partialCharges(Core::Molecule &mol) const =0 (function) of class Avogadro::Calc::ChargeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: argument 'array' of command @param is not found in the argument list of ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: The following parameter of Avogadro::Calc::ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const is not documented:
  parameter 'points'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h:35: warning: Member DefaultModel(const std::string &identifier="") (function) of class Avogadro::Calc::DefaultModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h:80: warning: Member m_identifier (variable) of class Avogadro::Calc::DefaultModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/defaultmodel.h:81: warning: Member m_elements (variable) of class Avogadro::Calc::DefaultModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h:118: warning: Member m_mask (variable) of class Avogadro::Calc::EnergyCalculator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:42: warning: Member value(const Eigen::VectorXd &x) override (function) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:43: warning: Member gradient(const Eigen::VectorXd &x, Eigen::VectorXd &grad) override (function) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:51: warning: Member m_molecule (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:52: warning: Member m_cell (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:53: warning: Member m_radii (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:54: warning: Member m_vdw (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:55: warning: Member m_depth (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:56: warning: Member m_exponent (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/lennardjones.h:58: warning: Member m_elements (variable) of class Avogadro::Calc::LennardJones is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/energycalculator.h:118: warning: Member m_mask (variable) of class Avogadro::Calc::EnergyCalculator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:21: warning: Member Angle (typedef) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:21: warning: Member Dihedral (typedef) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:15: warning: Member AtomHybridization (enumeration) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:32: warning: Member AtomicNumber (enumeration) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:381: warning: Member operator==(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:388: warning: Member operator!=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:394: warning: Member operator<(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:401: warning: Member operator>(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:407: warning: Member operator<=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:413: warning: Member operator>=(const Array< T > &lhs, const Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:419: warning: Member swap(Array< T > &lhs, Array< T > &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/avogadrocore.h:63: warning: Member isCustomElement(unsigned char atomicNumber) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:59: warning: Member ALAData("ALA", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HB3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:88: warning: Member CYSData("CYS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "SG", 16 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HG", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "SG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "SG", "HG" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:119: warning: Member ASPData("ASP", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OD1", 8 }, { "OD2", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD2", 1 }, { "HD2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "OD2" }, { "OD2", "HD2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "OD1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:153: warning: Member GLUData("GLU", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE1", 8 }, { "OE2", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "OE2" }, { "OE2", "HE2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CD", "OE1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:193: warning: Member PHEData("PHE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HZ", 1 }, { "HZ", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "HZ" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:223: warning: Member GLYData("GLY", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA2", 1 }, { "HA3", 1 }, { "HA3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "HA2" }, { "CA", "HA3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:246: warning: Member HISData("HIS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "ND1", 7 }, { "CD2", 6 }, { "CE1", 6 }, { "NE2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "ND1" }, { "ND1", "HD1" }, { "CD2", "NE2" }, { "CD2", "HD2" }, { "CE1", "NE2" }, { "CE1", "HE1" }, { "NE2", "HE2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD2" }, { "ND1", "CE1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:275: warning: Member ILEData("ILE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG1", 6 }, { "CG2", 6 }, { "CD1", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG12", 1 }, { "HG13", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HD11", 1 }, { "HD12", 1 }, { "HD13", 1 }, { "HD13", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "CG1", "CD1" }, { "CG1", "HG12" }, { "CG1", "HG13" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "CD1", "HD11" }, { "CD1", "HD12" }, { "CD1", "HD13" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:291: warning: Member LYSData("LYS", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "CE", 6 }, { "NZ", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HZ1", 1 }, { "HZ2", 1 }, { "HZ3", 1 }, { "HZ3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "CE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "CE", "NZ" }, { "CE", "HE2" }, { "CE", "HE3" }, { "NZ", "HZ1" }, { "NZ", "HZ2" }, { "NZ", "HZ3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:308: warning: Member LEUData("LEU", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HD11", 1 }, { "HD12", 1 }, { "HD13", 1 }, { "HD21", 1 }, { "HD22", 1 }, { "HD23", 1 }, { "HD23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD1" }, { "CG", "CD2" }, { "CG", "HG" }, { "CD1", "HD11" }, { "CD1", "HD12" }, { "CD1", "HD13" }, { "CD2", "HD21" }, { "CD2", "HD22" }, { "CD2", "HD23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:324: warning: Member METData("MET", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "CE", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HE3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "SD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "SD", "CE" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:352: warning: Member ASNData("ASN", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OD1", 8 }, { "ND2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD21", 1 }, { "HD22", 1 }, { "HD22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "ND2" }, { "ND2", "HD21" }, { "ND2", "HD22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "OD1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:388: warning: Member PROData("PRO", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OXT", 8 }, { "H", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HD3", 1 } }, { { "N", "CA" }, { "N", "CD" }, { "N", "H" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "HD2" }, { "CD", "HD3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:426: warning: Member GLNData("GLN", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE1", 8 }, { "NE2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE21", 1 }, { "HE22", 1 }, { "HE22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "NE2" }, { "NE2", "HE21" }, { "NE2", "HE22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CD", "OE1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:453: warning: Member ARGData("ARG", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "NE", 7 }, { "CZ", 6 }, { "NH1", 7 }, { "NH2", 7 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE", 1 }, { "HH11", 1 }, { "HH12", 1 }, { "HH21", 1 }, { "HH22", 1 }, { "HH22", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "NE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "NE", "CZ" }, { "NE", "HE" }, { "CZ", "NH1" }, { "NH1", "HH11" }, { "NH1", "HH12" }, { "NH2", "HH21" }, { "NH2", "HH22" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CZ", "NH2" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:471: warning: Member SERData("SER", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OG", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG", 1 }, { "HG", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "OG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OG", "HG" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:502: warning: Member THRData("THR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "OG1", 8 }, { "CG2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG1", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HG23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "OG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "OG1", "HG1" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:539: warning: Member VALData("VAL", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG1", 6 }, { "CG2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG11", 1 }, { "HG12", 1 }, { "HG13", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HG23", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG1" }, { "CB", "CG2" }, { "CB", "HB" }, { "CG1", "HG11" }, { "CG1", "HG12" }, { "CG1", "HG13" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:580: warning: Member TRPData("TRP", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "NE1", 7 }, { "CE2", 6 }, { "CE3", 6 }, { "CZ2", 6 }, { "CZ3", 6 }, { "CH2", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HE1", 1 }, { "HE3", 1 }, { "HZ2", 1 }, { "HZ3", 1 }, { "HH2", 1 }, { "HH2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "NE1" }, { "CD1", "HD1" }, { "CD2", "CE3" }, { "NE1", "CE2" }, { "NE1", "HE1" }, { "CE2", "CZ2" }, { "CE3", "HE3" }, { "CZ2", "HZ2" }, { "CZ3", "CH2" }, { "CZ3", "HZ3" }, { "CH2", "HH2" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE3", "CZ3" }, { "CZ2", "CH2" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:602: warning: Member TYRData("TYR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OH", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HH", 1 }, { "HH", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "OH" }, { "OH", "HH" }, { "OXT", "HXT" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:618: warning: Member DAData("DA", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H61", 1 }, { "H62", 1 }, { "H62", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "H61" }, { "N6", "H62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:645: warning: Member DCData("DC", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H41", 1 }, { "H42", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "C4", "N4" }, { "C4", "C5" }, { "N4", "H41" }, { "N4", "H42" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "N3", "C4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:666: warning: Member DGData("DG", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H21", 1 }, { "H21", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "N2" }, { "N2", "H21" }, { "N2", "H22" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:693: warning: Member DTData("DT", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "C7", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H3", 1 }, { "H71", 1 }, { "H72", 1 }, { "H73", 1 }, { "H73", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "H3" }, { "C4", "C5" }, { "C5", "C7" }, { "C7", "H71" }, { "C7", "H72" }, { "C7", "H73" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "C4", "O4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:716: warning: Member DIData("DI", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "H2''", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H1", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "C2'", "H2''" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:741: warning: Member AData("A", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H61", 1 }, { "H62", 1 }, { "H62", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "H61" }, { "N6", "H62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:768: warning: Member CData("C", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H41", 1 }, { "H42", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "C4", "N4" }, { "C4", "C5" }, { "N4", "H41" }, { "N4", "H42" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "N3", "C4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:789: warning: Member GData("G", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H21", 1 }, { "H21", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "N2" }, { "N2", "H21" }, { "N2", "H22" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:816: warning: Member UData("U", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "C6", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H3", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N1" }, { "C1'", "H1'" }, { "N1", "C2" }, { "N1", "C6" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "H3" }, { "C4", "C5" }, { "C5", "H5" }, { "C6", "H6" } }, { { "P", "OP1" }, { "C2", "O2" }, { "C4", "O4" }, { "C5", "C6" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:837: warning: Member IData("I", { { "OP3", 8 }, { "P", 15 }, { "OP1", 8 }, { "OP2", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP3", 1 }, { "HOP2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "H1", 1 }, { "H1", 1 } }, { { "OP3", "P" }, { "OP3", "HOP3" }, { "P", "OP2" }, { "P", "O5'" }, { "OP2", "HOP2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "H1" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "OP1" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:864: warning: Member HEMData("HEM", { { "CHA", 6 }, { "CHB", 6 }, { "CHC", 6 }, { "CHD", 6 }, { "C1A", 6 }, { "C2A", 6 }, { "C3A", 6 }, { "C4A", 6 }, { "CMA", 6 }, { "CAA", 6 }, { "CBA", 6 }, { "CGA", 6 }, { "O1A", 8 }, { "O2A", 8 }, { "C1B", 6 }, { "C2B", 6 }, { "C3B", 6 }, { "C4B", 6 }, { "CMB", 6 }, { "CAB", 6 }, { "CBB", 6 }, { "C1C", 6 }, { "C2C", 6 }, { "C3C", 6 }, { "C4C", 6 }, { "CMC", 6 }, { "CAC", 6 }, { "CBC", 6 }, { "C1D", 6 }, { "C2D", 6 }, { "C3D", 6 }, { "C4D", 6 }, { "CMD", 6 }, { "CAD", 6 }, { "CBD", 6 }, { "CGD", 6 }, { "O1D", 8 }, { "O2D", 8 }, { "NA", 7 }, { "NB", 7 }, { "NC", 7 }, { "ND", 7 }, { "FE", 26 }, { "HHB", 1 }, { "HHC", 1 }, { "HHD", 1 }, { "HMA", 1 }, { "HMAA", 1 }, { "HMAB", 1 }, { "HAA", 1 }, { "HAAA", 1 }, { "HBA", 1 }, { "HBAA", 1 }, { "HMB", 1 }, { "HMBA", 1 }, { "HMBB", 1 }, { "HAB", 1 }, { "HBB", 1 }, { "HBBA", 1 }, { "HMC", 1 }, { "HMCA", 1 }, { "HMCB", 1 }, { "HAC", 1 }, { "HBC", 1 }, { "HBCA", 1 }, { "HMD", 1 }, { "HMDA", 1 }, { "HMDB", 1 }, { "HAD", 1 }, { "HADA", 1 }, { "HBD", 1 }, { "HBDA", 1 }, { "H2A", 1 }, { "H2D", 1 }, { "H2D", 1 } }, { { "CHA", "C1A" }, { "CHA", "HHA" }, { "CHB", "C4A" }, { "CHB", "HHB" }, { "CHC", "C4B" }, { "CHC", "HHC" }, { "CHD", "C1D" }, { "CHD", "HHD" }, { "C1A", "NA" }, { "C2A", "C3A" }, { "C2A", "CAA" }, { "C3A", "CMA" }, { "C4A", "NA" }, { "CMA", "HMA" }, { "CMA", "HMAA" }, { "CMA", "HMAB" }, { "CAA", "CBA" }, { "CAA", "HAA" }, { "CAA", "HAAA" }, { "CBA", "CGA" }, { "CBA", "HBA" }, { "CBA", "HBAA" }, { "CGA", "O2A" }, { "O2A", "H2A" }, { "C1B", "C2B" }, { "C1B", "NB" }, { "C2B", "CMB" }, { "C3B", "C4B" }, { "C3B", "CAB" }, { "CMB", "HMB" }, { "CMB", "HMBA" }, { "CMB", "HMBB" }, { "CAB", "HAB" }, { "CBB", "HBB" }, { "CBB", "HBBA" }, { "C1C", "C2C" }, { "C1C", "NC" }, { "C2C", "CMC" }, { "C3C", "C4C" }, { "C3C", "CAC" }, { "C4C", "NC" }, { "CMC", "HMC" }, { "CMC", "HMCA" }, { "CMC", "HMCB" }, { "CAC", "HAC" }, { "CBC", "HBC" }, { "CBC", "HBCA" }, { "C1D", "C2D" }, { "C2D", "CMD" }, { "C3D", "C4D" }, { "C3D", "CAD" }, { "C4D", "ND" }, { "CMD", "HMD" }, { "CMD", "HMDA" }, { "CMD", "HMDB" }, { "CAD", "CBD" }, { "CAD", "HAD" }, { "CAD", "HADA" }, { "CBD", "CGD" }, { "CBD", "HBD" }, { "CBD", "HBDA" }, { "CGD", "O2D" }, { "O2D", "H2D" }, { "FE", "NA" }, { "FE", "NB" }, { "FE", "NC" }, { "FE", "ND" } }, { { "CHA", "C4D" }, { "CHB", "C1B" }, { "CHC", "C1C" }, { "CHD", "C4C" }, { "C1A", "C2A" }, { "C3A", "C4A" }, { "CGA", "O1A" }, { "C2B", "C3B" }, { "C4B", "NB" }, { "CAB", "CBB" }, { "C2C", "C3C" }, { "CAC", "CBC" }, { "C1D", "ND" }, { "C2D", "C3D" }, { "CGD", "O1D" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:916: warning: Member HOHData("HOH", { { "O", 8 }, { "H1", 1 }, { "H1", 1 } }, { { "O", "H1" }, { "O", "H2" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:923: warning: Member SO4Data("SO4", { { "S", 16 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O3", 8 } }, { { "S", "O3" }, { "S", "O4" } }, { { "S", "O1" }, { "S", "O2" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:931: warning: Member GOLData("GOL", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "O3", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H2", 1 }, { "HO2", 1 }, { "H31", 1 }, { "H32", 1 }, { "H32", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "C3" }, { "C2", "H2" }, { "O2", "HO2" }, { "C3", "O3" }, { "C3", "H31" }, { "C3", "H32" }, { "O3", "HO3" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:963: warning: Member EDOData("EDO", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "HO2" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:987: warning: Member MSEData("MSE", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "SE", 34 }, { "CE", 6 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HXT", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "OXT", "HXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "SE" }, { "CG", "HG2" }, { "CG", "HG3" }, { "SE", "CE" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1015: warning: Member NAGData("NAG", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "N2", 7 }, { "O1", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "O7", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H81", 1 }, { "H82", 1 }, { "H83", 1 }, { "HN2", 1 }, { "HO1", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "N2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "N2" }, { "C8", "H81" }, { "C8", "H82" }, { "C8", "H83" }, { "N2", "HN2" }, { "O1", "HO1" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, { { "C7", "O7" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1035: warning: Member PO4Data("PO4", { { "P", 15 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O3", 8 } }, { { "P", "O2" }, { "P", "O3" }, { "P", "O4" } }, { { "P", "O1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1043: warning: Member ACTData("ACT", { { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CH3", 6 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "OXT" }, { "C", "CH3" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1060: warning: Member PEGData("PEG", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "H11", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H41", 1 }, { "H42", 1 }, { "H42", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O4" }, { "C4", "H41" }, { "C4", "H42" }, { "O4", "HO4" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1098: warning: Member BMAData("BMA", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1115: warning: Member MANData("MAN", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1132: warning: Member DMSData("DMS", { { "S", 16 }, { "O", 8 }, { "C1", 6 }, { "C2", 6 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "S", "C1" }, { "S", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "H21" }, { "C2", "H22" }, { "C2", "H23" } }, { { "S", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1155: warning: Member ADPData("ADP", { { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOB2", 1 }, { "HOB3", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3B", "HOB3" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1185: warning: Member FADData("FAD", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4X", 6 }, { "N5", 7 }, { "C5X", 6 }, { "C6", 6 }, { "C7", 6 }, { "C7M", 6 }, { "C8", 6 }, { "C8M", 6 }, { "C9", 6 }, { "C9A", 6 }, { "N10", 7 }, { "C10", 6 }, { "C1'", 6 }, { "C2'", 6 }, { "O2'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C4'", 6 }, { "O4'", 8 }, { "C5'", 6 }, { "O5'", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "HN3", 1 }, { "H6", 1 }, { "HM71", 1 }, { "HM72", 1 }, { "HM73", 1 }, { "HM81", 1 }, { "HM82", 1 }, { "HM83", 1 }, { "H9", 1 }, { "H1'1", 1 }, { "H1'2", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H4'", 1 }, { "HO4'", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H5'2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3P" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "N1", "C2" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4X" }, { "C4X", "C10" }, { "N5", "C5X" }, { "C5X", "C9A" }, { "C6", "C7" }, { "C6", "H6" }, { "C7", "C7M" }, { "C7M", "HM71" }, { "C7M", "HM72" }, { "C7M", "HM73" }, { "C8", "C8M" }, { "C8", "C9" }, { "C8M", "HM81" }, { "C8M", "HM82" }, { "C8M", "HM83" }, { "C9", "H9" }, { "C9A", "N10" }, { "N10", "C10" }, { "N10", "C1'" }, { "C1'", "C2'" }, { "C1'", "H1'1" }, { "C1'", "H1'2" }, { "C2'", "O2'" }, { "C2'", "C3'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C3'", "O3'" }, { "C3'", "C4'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C4'", "O4'" }, { "C4'", "C5'" }, { "C4'", "H4'" }, { "O4'", "HO4'" }, { "C5'", "O5'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "O5'", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "N1", "C10" }, { "C2", "O2" }, { "C4", "O4" }, { "C4X", "N5" }, { "C5X", "C6" }, { "C7", "C8" }, { "C9", "C9A" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1241: warning: Member ACEData("ACE", { { "C", 6 }, { "O", 8 }, { "CH3", 6 }, { "H", 1 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "CH3" }, { "C", "H" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1258: warning: Member MPDData("MPD", { { "C1", 6 }, { "C2", 6 }, { "O2", 8 }, { "CM", 6 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "C5", 6 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "HO2", 1 }, { "HM1", 1 }, { "HM2", 1 }, { "HM3", 1 }, { "H31", 1 }, { "H32", 1 }, { "H4", 1 }, { "HO4", 1 }, { "H51", 1 }, { "H52", 1 }, { "H52", 1 } }, { { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "O2" }, { "C2", "CM" }, { "C2", "C3" }, { "O2", "HO2" }, { "CM", "HM1" }, { "CM", "HM2" }, { "CM", "HM3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O4" }, { "C4", "C5" }, { "C4", "H4" }, { "O4", "HO4" }, { "C5", "H51" }, { "C5", "H52" }, { "C5", "H53" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1276: warning: Member GLCData("GLC", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1293: warning: Member ATPData("ATP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "O3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1326: warning: Member MESData("MES", { { "O1", 8 }, { "C2", 6 }, { "C3", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "S", 16 }, { "O1S", 8 }, { "O2S", 8 }, { "O3S", 8 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "HN4", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H81", 1 } }, { { "O1", "C2" }, { "O1", "C6" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "N4" }, { "C3", "H31" }, { "C3", "H32" }, { "N4", "C5" }, { "N4", "C7" }, { "N4", "HN4" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "S" }, { "C8", "H81" }, { "C8", "H82" }, { "S", "O3S" } }, { { "S", "O1S" }, { "S", "O2S" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1343: warning: Member TRSData("TRS", { { "C", 6 }, { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "N", 7 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "HN1", 1 }, { "HN2", 1 }, { "HN3", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO2", 1 } }, { { "C", "C1" }, { "C", "C2" }, { "C", "C3" }, { "C", "N" }, { "C1", "O1" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "O3" }, { "C3", "H31" }, { "C3", "H32" }, { "N", "HN1" }, { "N", "HN2" }, { "N", "HN3" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1372: warning: Member PG4Data("PG4", { { "O1", 8 }, { "C1", 6 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O3", 8 }, { "C5", 6 }, { "C6", 6 }, { "O4", 8 }, { "C7", 6 }, { "C8", 6 }, { "O5", 8 }, { "HO1", 1 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H41", 1 }, { "H42", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H82", 1 }, { "H82", 1 } }, { { "O1", "C1" }, { "O1", "HO1" }, { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O2" }, { "C2", "H21" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H31" }, { "C3", "H32" }, { "C4", "O3" }, { "C4", "H41" }, { "C4", "H42" }, { "O3", "C5" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "O4" }, { "C6", "H61" }, { "C6", "H62" }, { "O4", "C7" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "O5" }, { "C8", "H81" }, { "C8", "H82" }, { "O5", "HO5" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1393: warning: Member PGEData("PGE", { { "C1", 6 }, { "O1", 8 }, { "C2", 6 }, { "O2", 8 }, { "C3", 6 }, { "C4", 6 }, { "O4", 8 }, { "C6", 6 }, { "C5", 6 }, { "O3", 8 }, { "H1", 1 }, { "H12", 1 }, { "HO1", 1 }, { "H2", 1 }, { "H22", 1 }, { "H3", 1 }, { "H32", 1 }, { "H4", 1 }, { "H42", 1 }, { "HO4", 1 }, { "H6", 1 }, { "H62", 1 }, { "H5", 1 }, { "H5", 1 } }, { { "C1", "O1" }, { "C1", "C2" }, { "C1", "H1" }, { "C1", "H12" }, { "O1", "HO1" }, { "C2", "O2" }, { "C2", "H2" }, { "C2", "H22" }, { "O2", "C3" }, { "C3", "C4" }, { "C3", "H3" }, { "C3", "H32" }, { "C4", "O3" }, { "C4", "H4" }, { "C4", "H42" }, { "O4", "C6" }, { "O4", "HO4" }, { "C6", "C5" }, { "C6", "H6" }, { "C6", "H62" }, { "C5", "O3" }, { "C5", "H5" }, { "C5", "H52" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1410: warning: Member NADData("NAD", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H4N", 1 }, { "H5N", 1 }, { "H5N", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "H4N" }, { "C5N", "C6N" }, { "C5N", "H5N" }, { "C6N", "H6N" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "N1N", "C6N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C4N", "C5N" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1457: warning: Member FUCData("FUC", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H63", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO3", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "H61" }, { "C6", "H62" }, { "C6", "H63" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1474: warning: Member NH2Data("NH2", { { "N", 7 }, { "HN1", 1 }, { "HN1", 1 } }, { { "N", "HN1" }, { "N", "HN2" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1481: warning: Member FMTData("FMT", { { "C", 6 }, { "O1", 8 }, { "O2", 8 }, { "H", 1 }, { "H", 1 } }, { { "C", "O2" }, { "C", "H" }, { "O2", "HO2" } }, { { "C", "O1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1489: warning: Member NAPData("NAP", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "P2B", 15 }, { "O1X", 8 }, { "O2X", 8 }, { "O3X", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H4N", 1 }, { "H5N", 1 }, { "H6N", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "P2B" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "H4N" }, { "C5N", "C6N" }, { "C5N", "H5N" }, { "C6N", "H6N" }, { "P2B", "O2X" }, { "P2B", "O3X" }, { "O2X", "HOP2" }, { "O3X", "HOP3" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "N1N", "C6N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C4N", "C5N" }, { "P2B", "O1X" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1539: warning: Member SEPData("SEP", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "OG", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HXT", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "OG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "OG", "P" }, { "C", "OXT" }, { "OXT", "HXT" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "C", "O" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1579: warning: Member GDPData("GDP", { { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOB2", 1 }, { "HOB3", 1 }, { "HOA2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PB", "O2B" }, { "PB", "O3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3B", "HOB3" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1609: warning: Member GALData("GAL", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H1", 1 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1626: warning: Member SF4Data("SF4", { { "FE1", 26 }, { "FE2", 26 }, { "FE3", 26 }, { "FE4", 26 }, { "S1", 16 }, { "S2", 16 }, { "S3", 16 }, { "S3", 16 } }, { { "FE1", "S2" }, { "FE1", "S3" }, { "FE1", "S4" }, { "FE2", "S1" }, { "FE2", "S3" }, { "FE2", "S4" }, { "FE3", "S1" }, { "FE3", "S2" }, { "FE3", "S4" }, { "FE4", "S1" }, { "FE4", "S2" }, { "FE4", "S3" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1651: warning: Member BGCData("BGC", { { "C2", 6 }, { "C3", 6 }, { "C4", 6 }, { "C5", 6 }, { "C6", 6 }, { "C1", 6 }, { "O1", 8 }, { "O2", 8 }, { "O3", 8 }, { "O4", 8 }, { "O5", 8 }, { "O6", 8 }, { "H2", 1 }, { "H3", 1 }, { "H4", 1 }, { "H5", 1 }, { "H61", 1 }, { "H62", 1 }, { "H1", 1 }, { "HO1", 1 }, { "HO2", 1 }, { "HO3", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C2", "C3" }, { "C2", "C1" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "C4" }, { "C3", "O3" }, { "C3", "H3" }, { "C4", "C5" }, { "C4", "O4" }, { "C4", "H4" }, { "C5", "C6" }, { "C5", "O5" }, { "C5", "H5" }, { "C6", "O6" }, { "C6", "H61" }, { "C6", "H62" }, { "C1", "O1" }, { "C1", "O5" }, { "C1", "H1" }, { "O1", "HO1" }, { "O2", "HO2" }, { "O3", "HO3" }, { "O4", "HO4" }, { "O6", "HO6" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1668: warning: Member FMNData("FMN", { { "N1", 7 }, { "C2", 6 }, { "O2", 8 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4A", 6 }, { "N5", 7 }, { "C5A", 6 }, { "C6", 6 }, { "C7", 6 }, { "C7M", 6 }, { "C8", 6 }, { "C8M", 6 }, { "C9", 6 }, { "C9A", 6 }, { "N10", 7 }, { "C10", 6 }, { "C1'", 6 }, { "C2'", 6 }, { "O2'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C4'", 6 }, { "O4'", 8 }, { "C5'", 6 }, { "O5'", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "HN3", 1 }, { "H6", 1 }, { "HM71", 1 }, { "HM72", 1 }, { "HM73", 1 }, { "HM81", 1 }, { "HM82", 1 }, { "HM83", 1 }, { "H9", 1 }, { "H1'1", 1 }, { "H1'2", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H4'", 1 }, { "HO4'", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N1", "C2" }, { "C2", "N3" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4A" }, { "C4A", "C10" }, { "N5", "C5A" }, { "C5A", "C9A" }, { "C6", "C7" }, { "C6", "H6" }, { "C7", "C7M" }, { "C7M", "HM71" }, { "C7M", "HM72" }, { "C7M", "HM73" }, { "C8", "C8M" }, { "C8", "C9" }, { "C8M", "HM81" }, { "C8M", "HM82" }, { "C8M", "HM83" }, { "C9", "H9" }, { "C9A", "N10" }, { "N10", "C10" }, { "N10", "C1'" }, { "C1'", "C2'" }, { "C1'", "H1'1" }, { "C1'", "H1'2" }, { "C2'", "O2'" }, { "C2'", "C3'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C3'", "O3'" }, { "C3'", "C4'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C4'", "O4'" }, { "C4'", "C5'" }, { "C4'", "H4'" }, { "O4'", "HO4'" }, { "C5'", "O5'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "O5'", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "N1", "C10" }, { "C2", "O2" }, { "C4", "O4" }, { "C4A", "N5" }, { "C5A", "C6" }, { "C7", "C8" }, { "C9", "C9A" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1704: warning: Member UNKData("UNK", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "CB", 6 }, { "CG", 6 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HG3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "HG1" }, { "CG", "HG2" }, { "CG", "HG3" }, { "OXT", "HXT" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1739: warning: Member CITData("CIT", { { "C1", 6 }, { "O1", 8 }, { "O2", 8 }, { "C2", 6 }, { "C3", 6 }, { "O7", 8 }, { "C4", 6 }, { "C5", 6 }, { "O3", 8 }, { "O4", 8 }, { "C6", 6 }, { "O5", 8 }, { "O6", 8 }, { "HO2", 1 }, { "H21", 1 }, { "H22", 1 }, { "HO7", 1 }, { "H41", 1 }, { "H42", 1 }, { "HO4", 1 }, { "HO4", 1 } }, { { "C1", "O2" }, { "C1", "C2" }, { "O2", "HO2" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "O7" }, { "C3", "C4" }, { "C3", "C6" }, { "O7", "HO7" }, { "C4", "C5" }, { "C4", "H41" }, { "C4", "H42" }, { "C5", "O4" }, { "O4", "HO4" }, { "C6", "O6" }, { "O6", "HO6" } }, { { "C1", "O1" }, { "C5", "O3" }, { "C6", "O5" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1767: warning: Member EPEData("EPE", { { "N1", 7 }, { "C2", 6 }, { "C3", 6 }, { "N4", 7 }, { "C5", 6 }, { "C6", 6 }, { "C7", 6 }, { "C8", 6 }, { "O8", 8 }, { "C9", 6 }, { "C10", 6 }, { "S", 16 }, { "O1S", 8 }, { "O2S", 8 }, { "O3S", 8 }, { "H21", 1 }, { "H22", 1 }, { "H31", 1 }, { "H32", 1 }, { "H51", 1 }, { "H52", 1 }, { "H61", 1 }, { "H62", 1 }, { "H71", 1 }, { "H72", 1 }, { "H81", 1 }, { "H82", 1 }, { "HO8", 1 }, { "H91", 1 }, { "H92", 1 }, { "H101", 1 }, { "H102", 1 }, { "H102", 1 } }, { { "N1", "C2" }, { "N1", "C6" }, { "N1", "C9" }, { "C2", "C3" }, { "C2", "H21" }, { "C2", "H22" }, { "C3", "N4" }, { "C3", "H31" }, { "C3", "H32" }, { "N4", "C5" }, { "N4", "C7" }, { "C5", "C6" }, { "C5", "H51" }, { "C5", "H52" }, { "C6", "H61" }, { "C6", "H62" }, { "C7", "C8" }, { "C7", "H71" }, { "C7", "H72" }, { "C8", "O8" }, { "C8", "H81" }, { "C8", "H82" }, { "O8", "HO8" }, { "C9", "C10" }, { "C9", "H91" }, { "C9", "H92" }, { "C10", "S" }, { "C10", "H101" }, { "C10", "H102" }, { "S", "O3S" }, { "O3S", "HOS3" } }, { { "S", "O1S" }, { "S", "O2S" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1788: warning: Member TPOData("TPO", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG2", 6 }, { "OG1", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "H2", 1 }, { "HA", 1 }, { "HB", 1 }, { "HG21", 1 }, { "HG22", 1 }, { "HG23", 1 }, { "HOP2", 1 }, { "HOP3", 1 }, { "HOP3", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "H2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG2" }, { "CB", "OG1" }, { "CB", "HB" }, { "CG2", "HG21" }, { "CG2", "HG22" }, { "CG2", "HG23" }, { "OG1", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "P", "O1P" }, { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1818: warning: Member PLPData("PLP", { { "N1", 7 }, { "C2", 6 }, { "C2A", 6 }, { "C3", 6 }, { "O3", 8 }, { "C4", 6 }, { "C4A", 6 }, { "O4A", 8 }, { "C5", 6 }, { "C6", 6 }, { "C5A", 6 }, { "O4P", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H2A1", 1 }, { "H2A2", 1 }, { "H2A3", 1 }, { "HO3", 1 }, { "H4A", 1 }, { "H6", 1 }, { "H5A1", 1 }, { "H5A2", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "N1", "C6" }, { "C2", "C2A" }, { "C2", "C3" }, { "C2A", "H2A1" }, { "C2A", "H2A2" }, { "C2A", "H2A3" }, { "C3", "O3" }, { "O3", "HO3" }, { "C4", "C4A" }, { "C4", "C5" }, { "C4A", "H4A" }, { "C5", "C5A" }, { "C6", "H6" }, { "C5A", "O4P" }, { "C5A", "H5A1" }, { "C5A", "H5A2" }, { "O4P", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HOP2" }, { "O3P", "HOP3" } }, { { "N1", "C2" }, { "C3", "C4" }, { "C4A", "O4A" }, { "C5", "C6" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1840: warning: Member GTPData("GTP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "O3B", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'", 1 }, { "H5''", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "O3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "O3B", "PB" }, { "PB", "O2B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'" }, { "C5'", "H5''" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1873: warning: Member SAHData("SAH", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HN1", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HXT", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "N", "CA" }, { "N", "HN1" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "SD" }, { "CG", "HG1" }, { "CG", "HG2" }, { "SD", "C5'" }, { "C", "OXT" }, { "OXT", "HXT" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "C", "O" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1904: warning: Member BMEData("BME", { { "C1", 6 }, { "C2", 6 }, { "O1", 8 }, { "S2", 16 }, { "H11", 1 }, { "H12", 1 }, { "H21", 1 }, { "H22", 1 }, { "HO1", 1 }, { "HO1", 1 } }, { { "C1", "C2" }, { "C1", "O1" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "S2" }, { "C2", "H21" }, { "C2", "H22" }, { "O1", "HO1" }, { "S2", "HS2" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1928: warning: Member ACYData("ACY", { { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CH3", 6 }, { "HXT", 1 }, { "H1", 1 }, { "H2", 1 }, { "H2", 1 } }, { { "C", "OXT" }, { "C", "CH3" }, { "OXT", "HXT" }, { "CH3", "H1" }, { "CH3", "H2" }, { "CH3", "H3" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1947: warning: Member ANPData("ANP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "N3B", 7 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HOB2", 1 }, { "HNB1", 1 }, { "HOA2", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "N3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "PB", "O2B" }, { "PB", "N3B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "N3B", "HNB1" }, { "PA", "O2A" }, { "PA", "O3A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:1980: warning: Member IMDData("IMD", { { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "C5", 6 }, { "HN1", 1 }, { "H2", 1 }, { "HN3", 1 }, { "H4", 1 }, { "H4", 1 } }, { { "N1", "C2" }, { "N1", "C5" }, { "N1", "HN1" }, { "C2", "H2" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "H4" }, { "C5", "H5" } }, { { "C2", "N3" }, { "C4", "C5" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2003: warning: Member PCAData("PCA", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "OE", 8 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "H", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HG3", 1 } }, { { "N", "CA" }, { "N", "CD" }, { "N", "H" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "C", "OXT" }, { "OXT", "HXT" } }, { { "CD", "OE" }, { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2038: warning: Member CSOData("CSO", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "SG", 16 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "OD", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HXT", 1 }, { "HXT", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "SG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "SG", "OD" }, { "C", "OXT" }, { "OXT", "HXT" }, { "OD", "HD" } }, { { "C", "O" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2071: warning: Member MLIData("MLI", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "O6", 8 }, { "O7", 8 }, { "O8", 8 }, { "O9", 8 }, { "H11", 1 }, { "H11", 1 } }, { { "C1", "C2" }, { "C1", "C3" }, { "C1", "H11" }, { "C1", "H12" }, { "C2", "O7" }, { "C3", "O9" } }, { { "C2", "O6" }, { "C3", "O8" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2091: warning: Member FESData("FES", { { "FE1", 26 }, { "FE2", 26 }, { "S1", 16 }, { "S1", 16 } }, { { "FE1", "S1" }, { "FE1", "S2" }, { "FE2", "S1" }, { "FE2", "S2" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2100: warning: Member NDPData("NDP", { { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5B", 8 }, { "C5B", 6 }, { "C4B", 6 }, { "O4B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "C2B", 6 }, { "O2B", 8 }, { "C1B", 6 }, { "N9A", 7 }, { "C8A", 6 }, { "N7A", 7 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "O3", 8 }, { "PN", 15 }, { "O1N", 8 }, { "O2N", 8 }, { "O5D", 8 }, { "C5D", 6 }, { "C4D", 6 }, { "O4D", 8 }, { "C3D", 6 }, { "O3D", 8 }, { "C2D", 6 }, { "O2D", 8 }, { "C1D", 6 }, { "N1N", 7 }, { "C2N", 6 }, { "C3N", 6 }, { "C7N", 6 }, { "O7N", 8 }, { "N7N", 7 }, { "C4N", 6 }, { "C5N", 6 }, { "C6N", 6 }, { "P2B", 15 }, { "O1X", 8 }, { "O2X", 8 }, { "O3X", 8 }, { "HOA2", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "H4B", 1 }, { "H3B", 1 }, { "HO3A", 1 }, { "H2B", 1 }, { "H1B", 1 }, { "H8A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H2A", 1 }, { "H21N", 1 }, { "H51N", 1 }, { "H52N", 1 }, { "H4D", 1 }, { "H3D", 1 }, { "HO3N", 1 }, { "H2D", 1 }, { "HO2N", 1 }, { "H1D", 1 }, { "H2N", 1 }, { "H71N", 1 }, { "H72N", 1 }, { "H41N", 1 }, { "H42N", 1 }, { "H5N", 1 }, { "H6N", 1 }, { "HOP2", 1 }, { "HOP2", 1 } }, { { "PA", "O2A" }, { "PA", "O5B" }, { "PA", "O3" }, { "O2A", "HOA2" }, { "O5B", "C5B" }, { "C5B", "C4B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "C4B", "O4B" }, { "C4B", "C3B" }, { "C4B", "H4B" }, { "O4B", "C1B" }, { "C3B", "O3B" }, { "C3B", "C2B" }, { "C3B", "H3B" }, { "O3B", "HO3A" }, { "C2B", "O2B" }, { "C2B", "C1B" }, { "C2B", "H2B" }, { "O2B", "P2B" }, { "C1B", "N9A" }, { "C1B", "H1B" }, { "N9A", "C8A" }, { "N9A", "C4A" }, { "C8A", "H8A" }, { "N7A", "C5A" }, { "C5A", "C6A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "O3", "PN" }, { "PN", "O2N" }, { "PN", "O5D" }, { "O2N", "H21N" }, { "O5D", "C5D" }, { "C5D", "C4D" }, { "C5D", "H51N" }, { "C5D", "H52N" }, { "C4D", "O4D" }, { "C4D", "C3D" }, { "C4D", "H4D" }, { "O4D", "C1D" }, { "C3D", "O3D" }, { "C3D", "C2D" }, { "C3D", "H3D" }, { "O3D", "HO3N" }, { "C2D", "O2D" }, { "C2D", "C1D" }, { "C2D", "H2D" }, { "O2D", "HO2N" }, { "C1D", "N1N" }, { "C1D", "H1D" }, { "N1N", "C2N" }, { "N1N", "C6N" }, { "C2N", "H2N" }, { "C3N", "C7N" }, { "C3N", "C4N" }, { "C7N", "N7N" }, { "N7N", "H71N" }, { "N7N", "H72N" }, { "C4N", "C5N" }, { "C4N", "H41N" }, { "C4N", "H42N" }, { "C5N", "H5N" }, { "C6N", "H6N" }, { "P2B", "O2X" }, { "P2B", "O3X" }, { "O2X", "HOP2" }, { "O3X", "HOP3" } }, { { "PA", "O1A" }, { "C8A", "N7A" }, { "C5A", "C4A" }, { "C6A", "N1A" }, { "C2A", "N3A" }, { "PN", "O1N" }, { "C2N", "C3N" }, { "C7N", "O7N" }, { "C5N", "C6N" }, { "P2B", "O1X" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2155: warning: Member AMPData("AMP", { { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HOP2", 1 }, { "HOP3", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "P", "O2P" }, { "P", "O3P" }, { "P", "O5'" }, { "O2P", "HOP2" }, { "O3P", "HOP3" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "P", "O1P" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2182: warning: Member NO3Data("NO3", { { "N", 7 }, { "O1", 8 }, { "O2", 8 }, { "O2", 8 } }, { { "N", "O2" }, { "N", "O3" } }, { { "N", "O1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2189: warning: Member PTRData("PTR", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "CD1", 6 }, { "CD2", 6 }, { "CE1", 6 }, { "CE2", 6 }, { "CZ", 6 }, { "OH", 8 }, { "P", 15 }, { "O1P", 8 }, { "O2P", 8 }, { "O3P", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HXT", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HD1", 1 }, { "HD2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HO2P", 1 }, { "HO2P", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "OXT", "HXT" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD2" }, { "CD1", "CE1" }, { "CD1", "HD1" }, { "CD2", "HD2" }, { "CE1", "HE1" }, { "CE2", "CZ" }, { "CE2", "HE2" }, { "CZ", "OH" }, { "OH", "P" }, { "P", "O2P" }, { "P", "O3P" }, { "O2P", "HO2P" }, { "O3P", "HO3P" } }, { { "C", "O" }, { "CG", "CD1" }, { "CD2", "CE2" }, { "CE1", "CZ" }, { "P", "O1P" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2211: warning: Member IPAData("IPA", { { "C1", 6 }, { "C2", 6 }, { "C3", 6 }, { "O2", 8 }, { "H11", 1 }, { "H12", 1 }, { "H13", 1 }, { "H2", 1 }, { "H31", 1 }, { "H32", 1 }, { "H33", 1 }, { "H33", 1 } }, { { "C1", "C2" }, { "C1", "H11" }, { "C1", "H12" }, { "C1", "H13" }, { "C2", "C3" }, { "C2", "O2" }, { "C2", "H2" }, { "C3", "H31" }, { "C3", "H32" }, { "C3", "H33" }, { "O2", "HO2" } }, {}) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2239: warning: Member COAData("COA", { { "N1A", 7 }, { "C2A", 6 }, { "N3A", 7 }, { "C4A", 6 }, { "C5A", 6 }, { "C6A", 6 }, { "N6A", 7 }, { "N7A", 7 }, { "C8A", 6 }, { "N9A", 7 }, { "C1B", 6 }, { "C2B", 6 }, { "O2B", 8 }, { "C3B", 6 }, { "O3B", 8 }, { "P3B", 15 }, { "O7A", 8 }, { "O8A", 8 }, { "O9A", 8 }, { "C4B", 6 }, { "O4B", 8 }, { "C5B", 6 }, { "O5B", 8 }, { "P1A", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O3A", 8 }, { "P2A", 15 }, { "O4A", 8 }, { "O5A", 8 }, { "O6A", 8 }, { "CBP", 6 }, { "CCP", 6 }, { "CDP", 6 }, { "CEP", 6 }, { "CAP", 6 }, { "OAP", 8 }, { "C9P", 6 }, { "O9P", 8 }, { "N8P", 7 }, { "C7P", 6 }, { "C6P", 6 }, { "C5P", 6 }, { "O5P", 8 }, { "N4P", 7 }, { "C3P", 6 }, { "C2P", 6 }, { "S1P", 16 }, { "H2A", 1 }, { "H61A", 1 }, { "H62A", 1 }, { "H8A", 1 }, { "H1B", 1 }, { "H2B", 1 }, { "HO2A", 1 }, { "H3B", 1 }, { "HOA8", 1 }, { "HOA9", 1 }, { "H4B", 1 }, { "H51A", 1 }, { "H52A", 1 }, { "HOA2", 1 }, { "HOA5", 1 }, { "H121", 1 }, { "H122", 1 }, { "H131", 1 }, { "H132", 1 }, { "H133", 1 }, { "H141", 1 }, { "H142", 1 }, { "H143", 1 }, { "H10", 1 }, { "HO1", 1 }, { "HN8", 1 }, { "H71", 1 }, { "H72", 1 }, { "H61", 1 }, { "H62", 1 }, { "HN4", 1 }, { "H31", 1 }, { "H32", 1 }, { "H21", 1 }, { "H22", 1 }, { "H22", 1 } }, { { "N1A", "C2A" }, { "C2A", "H2A" }, { "N3A", "C4A" }, { "C4A", "N9A" }, { "C5A", "C6A" }, { "C5A", "N7A" }, { "C6A", "N6A" }, { "N6A", "H61A" }, { "N6A", "H62A" }, { "C8A", "N9A" }, { "C8A", "H8A" }, { "N9A", "C1B" }, { "C1B", "C2B" }, { "C1B", "O4B" }, { "C1B", "H1B" }, { "C2B", "O2B" }, { "C2B", "C3B" }, { "C2B", "H2B" }, { "O2B", "HO2A" }, { "C3B", "O3B" }, { "C3B", "C4B" }, { "C3B", "H3B" }, { "O3B", "P3B" }, { "P3B", "O8A" }, { "P3B", "O9A" }, { "O8A", "HOA8" }, { "O9A", "HOA9" }, { "C4B", "O4B" }, { "C4B", "C5B" }, { "C4B", "H4B" }, { "C5B", "O5B" }, { "C5B", "H51A" }, { "C5B", "H52A" }, { "O5B", "P1A" }, { "P1A", "O2A" }, { "P1A", "O3A" }, { "O2A", "HOA2" }, { "O3A", "P2A" }, { "P2A", "O5A" }, { "P2A", "O6A" }, { "O5A", "HOA5" }, { "O6A", "CCP" }, { "CBP", "CCP" }, { "CBP", "CDP" }, { "CBP", "CEP" }, { "CBP", "CAP" }, { "CCP", "H121" }, { "CCP", "H122" }, { "CDP", "H131" }, { "CDP", "H132" }, { "CDP", "H133" }, { "CEP", "H141" }, { "CEP", "H142" }, { "CEP", "H143" }, { "CAP", "OAP" }, { "CAP", "C9P" }, { "CAP", "H10" }, { "OAP", "HO1" }, { "C9P", "N8P" }, { "N8P", "C7P" }, { "N8P", "HN8" }, { "C7P", "C6P" }, { "C7P", "H71" }, { "C7P", "H72" }, { "C6P", "C5P" }, { "C6P", "H61" }, { "C6P", "H62" }, { "C5P", "N4P" }, { "N4P", "C3P" }, { "N4P", "HN4" }, { "C3P", "C2P" }, { "C3P", "H31" }, { "C3P", "H32" }, { "C2P", "S1P" }, { "C2P", "H21" }, { "C2P", "H22" }, { "S1P", "HS1" } }, { { "N1A", "C6A" }, { "C2A", "N3A" }, { "C4A", "C5A" }, { "N7A", "C8A" }, { "P3B", "O7A" }, { "P1A", "O1A" }, { "P2A", "O4A" }, { "C9P", "O9P" }, { "C5P", "O5P" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2290: warning: Member KCXData("KCX", { { "N", 7 }, { "CA", 6 }, { "CB", 6 }, { "CG", 6 }, { "CD", 6 }, { "CE", 6 }, { "NZ", 7 }, { "C", 6 }, { "O", 8 }, { "CX", 6 }, { "OXT", 8 }, { "OQ1", 8 }, { "OQ2", 8 }, { "H", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB2", 1 }, { "HB3", 1 }, { "HG2", 1 }, { "HG3", 1 }, { "HD2", 1 }, { "HD3", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "HZ", 1 }, { "HXT", 1 }, { "HXT", 1 } }, { { "N", "CA" }, { "N", "H" }, { "N", "HN2" }, { "CA", "CB" }, { "CA", "C" }, { "CA", "HA" }, { "CB", "CG" }, { "CB", "HB2" }, { "CB", "HB3" }, { "CG", "CD" }, { "CG", "HG2" }, { "CG", "HG3" }, { "CD", "CE" }, { "CD", "HD2" }, { "CD", "HD3" }, { "CE", "NZ" }, { "CE", "HE2" }, { "CE", "HE3" }, { "NZ", "CX" }, { "NZ", "HZ" }, { "C", "OXT" }, { "CX", "OQ2" }, { "OXT", "HXT" }, { "OQ2", "HQ2" } }, { { "C", "O" }, { "CX", "OQ1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2308: warning: Member H4BData("H4B", { { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "O4", 8 }, { "C4A", 6 }, { "C8A", 6 }, { "N5", 7 }, { "N8", 7 }, { "C6", 6 }, { "C7", 6 }, { "C9", 6 }, { "O9", 8 }, { "C10", 6 }, { "C11", 6 }, { "O10", 8 }, { "HN21", 1 }, { "HN22", 1 }, { "HN3", 1 }, { "HN5", 1 }, { "HN8", 1 }, { "H6", 1 }, { "H71", 1 }, { "H72", 1 }, { "H9", 1 }, { "HO9", 1 }, { "H10", 1 }, { "H111", 1 }, { "H112", 1 }, { "H113", 1 }, { "H113", 1 } }, { { "N1", "C8A" }, { "C2", "N2" }, { "C2", "N3" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" }, { "N3", "HN3" }, { "C4", "C4A" }, { "C4A", "N5" }, { "C8A", "N8" }, { "N5", "C6" }, { "N5", "HN5" }, { "N8", "C7" }, { "N8", "HN8" }, { "C6", "C7" }, { "C6", "C9" }, { "C6", "H6" }, { "C7", "H71" }, { "C7", "H72" }, { "C9", "O9" }, { "C9", "C10" }, { "C9", "H9" }, { "O9", "HO9" }, { "C10", "C11" }, { "C10", "O10" }, { "C10", "H10" }, { "C11", "H111" }, { "C11", "H112" }, { "C11", "H113" }, { "O10", "HO0" } }, { { "N1", "C2" }, { "C4", "O4" }, { "C4A", "C8A" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2329: warning: Member SAMData("SAM", { { "N", 7 }, { "CA", 6 }, { "C", 6 }, { "O", 8 }, { "OXT", 8 }, { "CB", 6 }, { "CG", 6 }, { "SD", 16 }, { "CE", 6 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "N6", 7 }, { "N1", 7 }, { "C2", 6 }, { "N3", 7 }, { "C4", 6 }, { "HN1", 1 }, { "HN2", 1 }, { "HA", 1 }, { "HB1", 1 }, { "HB2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HE1", 1 }, { "HE2", 1 }, { "HE3", 1 }, { "H5'1", 1 }, { "H5'2", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN61", 1 }, { "HN62", 1 }, { "HN62", 1 } }, { { "N", "CA" }, { "N", "HN1" }, { "N", "HN2" }, { "CA", "C" }, { "CA", "CB" }, { "CA", "HA" }, { "C", "OXT" }, { "CB", "CG" }, { "CB", "HB1" }, { "CB", "HB2" }, { "CG", "SD" }, { "CG", "HG1" }, { "CG", "HG2" }, { "SD", "CE" }, { "SD", "C5'" }, { "CE", "HE1" }, { "CE", "HE2" }, { "CE", "HE3" }, { "C5'", "C4'" }, { "C5'", "H5'1" }, { "C5'", "H5'2" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N6" }, { "N6", "HN61" }, { "N6", "HN62" }, { "N1", "C2" }, { "C2", "H2" }, { "N3", "C4" } }, { { "C", "O" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "N1" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2361: warning: Member GNPData("GNP", { { "PG", 15 }, { "O1G", 8 }, { "O2G", 8 }, { "O3G", 8 }, { "N3B", 7 }, { "PB", 15 }, { "O1B", 8 }, { "O2B", 8 }, { "O3A", 8 }, { "PA", 15 }, { "O1A", 8 }, { "O2A", 8 }, { "O5'", 8 }, { "C5'", 6 }, { "C4'", 6 }, { "O4'", 8 }, { "C3'", 6 }, { "O3'", 8 }, { "C2'", 6 }, { "O2'", 8 }, { "C1'", 6 }, { "N9", 7 }, { "C8", 6 }, { "N7", 7 }, { "C5", 6 }, { "C6", 6 }, { "O6", 8 }, { "N1", 7 }, { "C2", 6 }, { "N2", 7 }, { "N3", 7 }, { "C4", 6 }, { "HOG2", 1 }, { "HOG3", 1 }, { "HNB3", 1 }, { "HOB2", 1 }, { "HOA2", 1 }, { "H5'2", 1 }, { "H5'1", 1 }, { "H4'", 1 }, { "H3'", 1 }, { "HO3'", 1 }, { "H2'", 1 }, { "HO2'", 1 }, { "H1'", 1 }, { "H8", 1 }, { "HN1", 1 }, { "HN21", 1 }, { "HN21", 1 } }, { { "PG", "O2G" }, { "PG", "O3G" }, { "PG", "N3B" }, { "O2G", "HOG2" }, { "O3G", "HOG3" }, { "N3B", "PB" }, { "N3B", "HNB3" }, { "PB", "O2B" }, { "PB", "O3A" }, { "O2B", "HOB2" }, { "O3A", "PA" }, { "PA", "O2A" }, { "PA", "O5'" }, { "O2A", "HOA2" }, { "O5'", "C5'" }, { "C5'", "C4'" }, { "C5'", "H5'2" }, { "C5'", "H5'1" }, { "C4'", "O4'" }, { "C4'", "C3'" }, { "C4'", "H4'" }, { "O4'", "C1'" }, { "C3'", "O3'" }, { "C3'", "C2'" }, { "C3'", "H3'" }, { "O3'", "HO3'" }, { "C2'", "O2'" }, { "C2'", "C1'" }, { "C2'", "H2'" }, { "O2'", "HO2'" }, { "C1'", "N9" }, { "C1'", "H1'" }, { "N9", "C8" }, { "N9", "C4" }, { "C8", "H8" }, { "N7", "C5" }, { "C5", "C6" }, { "C6", "N1" }, { "N1", "C2" }, { "N1", "HN1" }, { "C2", "N2" }, { "N2", "HN21" }, { "N2", "HN22" }, { "N3", "C4" } }, { { "PG", "O1G" }, { "PB", "O1B" }, { "PA", "O1A" }, { "C8", "N7" }, { "C5", "C4" }, { "C6", "O6" }, { "C2", "N3" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2394: warning: Member FLCData("FLC", { { "CAC", 6 }, { "CA", 6 }, { "CB", 6 }, { "CBC", 6 }, { "CG", 6 }, { "CGC", 6 }, { "OA1", 8 }, { "OA2", 8 }, { "OB1", 8 }, { "OB2", 8 }, { "OG1", 8 }, { "OG2", 8 }, { "OHB", 8 }, { "HA1", 1 }, { "HA2", 1 }, { "HG1", 1 }, { "HG2", 1 }, { "HG2", 1 } }, { { "CAC", "CA" }, { "CAC", "OA2" }, { "CA", "CB" }, { "CA", "HA1" }, { "CA", "HA2" }, { "CB", "CBC" }, { "CB", "CG" }, { "CB", "OHB" }, { "CBC", "OB2" }, { "CG", "CGC" }, { "CG", "HG1" }, { "CG", "HG2" }, { "CGC", "OG2" }, { "OHB", "HOB" } }, { { "CAC", "OA1" }, { "CBC", "OB1" }, { "CGC", "OG1" } }) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:194: warning: Member swap(UnitCell &lhs, UnitCell &rhs) (function) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:7: warning: Member element_symbols[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:20: warning: Member element_names[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:47: warning: Member element_masses[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:71: warning: Member valence_electrons[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:83: warning: Member element_VDW[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:226: warning: Member element_covalent[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/elementdata.h:267: warning: Member element_color[][3] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:7: warning: Member chain_color[][3] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:25: warning: Member amino_color[][3] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:41: warning: Member shapely_color[][3] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuecolors.h:57: warning: Member secondary_color[][3] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:2431: warning: Member residueDict (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:16: warning: Member space_group_international_number[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:55: warning: Member space_group_schoenflies[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:134: warning: Member space_group_hall_symbol[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:666: warning: Member space_group_international[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1198: warning: Member space_group_international_full[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1730: warning: Member space_group_international_short[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1822: warning: Member space_group_setting[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/spacegroupdata.h:1884: warning: Member space_group_transforms[] (variable) of namespace Avogadro::Core is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:33: warning: Member operator*() (function) of class Avogadro::Core::AngleIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:37: warning: Member begin() (function) of class Avogadro::Core::AngleIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:39: warning: Member end() const (function) of class Avogadro::Core::AngleIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:43: warning: Member operator++() (function) of class Avogadro::Core::AngleIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/angleiterator.h:45: warning: Member operator!=(const AngleIterator &other) (function) of class Avogadro::Core::AngleIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:96: warning: Member Container (typedef) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:99: warning: Member ValueType (typedef) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:119: warning: Member Array(const size_t n, const ValueType &value=ValueType()) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:124: warning: Member Array(InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:156: warning: Member data() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:158: warning: Member constData() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:160: warning: Member size() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:162: warning: Member max_size() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:164: warning: Member empty() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:166: warning: Member capacity() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:168: warning: Member reserve(const size_t &sz) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:174: warning: Member resize(const size_t &sz, const ValueType &t=ValueType()) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:180: warning: Member clear() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:186: warning: Member begin() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:188: warning: Member end() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:190: warning: Member begin() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:196: warning: Member end() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:202: warning: Member rbegin() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:204: warning: Member rend() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:206: warning: Member rbegin() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:212: warning: Member rend() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:218: warning: Member front() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:224: warning: Member front() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:226: warning: Member back() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:232: warning: Member back() const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:235: warning: Member assign(InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:241: warning: Member assign(size_type n, const value_type &val) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:247: warning: Member push_back(const ValueType &v) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:253: warning: Member pop_back() (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:259: warning: Member insert(iterator position, const value_type &val) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:265: warning: Member insert(iterator position, size_type n, const value_type &val) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:272: warning: Member insert(iterator position, InputIterator first, InputIterator last) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:278: warning: Member erase(iterator position) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:284: warning: Member erase(iterator first, iterator last) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:290: warning: Member operator[](const std::size_t &idx) const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:295: warning: Member operator[](const std::size_t &idx) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:301: warning: Member at(const std::size_t &idx) const (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:304: warning: Member operator=(const std::vector< OtherT > &v) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:312: warning: Member operator=(const Array< OtherT > &v) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:319: warning: Member operator=(const Array &v) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:328: warning: Member swap(Array< ValueType > &other) (function) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:351: warning: Member d (variable) of class Avogadro::Core::Array is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:71: warning: Member m_content (variable) of class Avogadro::Core::ArraySet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:72: warning: Member m_data (variable) of class Avogadro::Core::ArraySet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:62: warning: Member Holder(const ValueType &value) (function) of class Avogadro::Core::ArraySet::Holder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:64: warning: Member type() const (function) of class Avogadro::Core::ArraySet::Holder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:66: warning: Member clone() const (function) of class Avogadro::Core::ArraySet::Holder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:68: warning: Member m_content (variable) of class Avogadro::Core::ArraySet::Holder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:53: warning: Member type() const =0 (function) of class Avogadro::Core::ArraySet::PlaceHolder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:55: warning: Member clone() const =0 (function) of class Avogadro::Core::ArraySet::PlaceHolder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:801: warning: Member Atom(Molecule *m, Index i) (function) of class Avogadro::Core::Atom is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:176: warning: Member selected() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:187: warning: Member label() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:117: warning: Member atomicNumber() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:128: warning: Member position2d() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:136: warning: Member position3d() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:144: warning: Member hybridization() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:152: warning: Member formalCharge() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:160: warning: Member color() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:168: warning: Member layer() const (function) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class AtomTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:44: warning: explicit link request to 'AtomType' could not be resolved
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class Avogadro::Core::AtomTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:176: warning: Member selected() const (function) of class Avogadro::Core::AtomTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class Avogadro::Core::AtomTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class Avogadro::Core::AtomTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:187: warning: Member label() const (function) of class Avogadro::Core::AtomTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class Avogadro::Core::AtomTyper is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::AtomTyper is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:808: warning: Member Bond(Molecule *m, Index i) (function) of class Avogadro::Core::Bond is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:93: warning: Member atom2() const (function) of class BondTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:111: warning: Member order() const (function) of class BondTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class BondTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class BondTemplate< Molecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:20: warning: explicit link request to 'BondType' could not be resolved
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class Avogadro::Core::BondTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class Avogadro::Core::BondTemplate is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/color3f.h:84: warning: Member m_data[3] (variable) of class Avogadro::Core::Color3f is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:40: warning: Member setMolecule(const Molecule *mol) (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:41: warning: Member molecule() const (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateblockgenerator.h:83: warning: Member specification() const (function) of class Avogadro::Core::CoordinateBlockGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:92: warning: Member resize(Index _size) (function) of class Avogadro::Core::CoordinateSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:93: warning: Member size() const (function) of class Avogadro::Core::CoordinateSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:94: warning: Member coordinates() (function) of class Avogadro::Core::CoordinateSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:95: warning: Member coordinates() const (function) of class Avogadro::Core::CoordinateSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:100: warning: Member operator[](Index _index) (function) of class Avogadro::Core::CoordinateSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:101: warning: Member operator[](Index _index) const (function) of class Avogadro::Core::CoordinateSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:71: warning: Member m_content (variable) of class Avogadro::Core::ArraySet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:72: warning: Member m_data (variable) of class Avogadro::Core::ArraySet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:98: warning: Found unknown command '\index'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:40: warning: Member Options (typedef) of class Avogadro::Core::CrystalTools is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:50: warning: The following parameter of Avogadro::Core::CrystalTools::rotateToStandardOrientation(Molecule &molecule, Options opts=None) is not documented:
  parameter 'molecule'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:65: warning: The following parameters of Avogadro::Core::CrystalTools::setVolume(Molecule &molecule, Real newVolume, Options opts=None) are not documented:
  parameter 'molecule'
  parameter 'newVolume'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:75: warning: The following parameter of Avogadro::Core::CrystalTools::niggliReduce(Molecule &molecule, Options opts=None) is not documented:
  parameter 'molecule'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:97: warning: The following parameter of Avogadro::Core::CrystalTools::buildSupercell(Molecule &molecule, unsigned int a, unsigned int b, unsigned int c) is not documented:
  parameter 'molecule'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:109: warning: The following parameters of Avogadro::Core::CrystalTools::setCellMatrix(Molecule &molecule, const Matrix3 &newCellColMatrix, Options opt=None) are not documented:
  parameter 'molecule'
  parameter 'newCellColMatrix'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:124: warning: Member data() const (function) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:227: warning: Member setName(const std::string &name_) (function) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:228: warning: Member name() const (function) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:230: warning: Member setCubeType(Type type) (function) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:231: warning: Member cubeType() const (function) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:239: warning: Member m_data (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:240: warning: Member m_min (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:240: warning: Member m_max (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:240: warning: Member m_spacing (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:241: warning: Member m_points (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:242: warning: Member m_minValue (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:242: warning: Member m_maxValue (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:243: warning: Member m_name (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:244: warning: Member m_cubeType (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:245: warning: Member m_lock (variable) of class Avogadro::Core::Cube is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:194: warning: The following parameter of Avogadro::Core::Cube::setValue(unsigned int i, float value) is not documented:
  parameter 'value'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:33: warning: Member operator*() (function) of class Avogadro::Core::DihedralIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:37: warning: Member begin() (function) of class Avogadro::Core::DihedralIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:39: warning: Member end() const (function) of class Avogadro::Core::DihedralIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:43: warning: Member operator++() (function) of class Avogadro::Core::DihedralIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/dihedraliterator.h:45: warning: Member operator!=(const DihedralIterator &other) (function) of class Avogadro::Core::DihedralIterator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:229: warning: Member symmetry() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:230: warning: Member atomIndices() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:231: warning: Member atomIndices() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:232: warning: Member moIndices() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:233: warning: Member moIndices() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:234: warning: Member gtoIndices() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:235: warning: Member gtoIndices() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:236: warning: Member cIndices() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:237: warning: Member cIndices() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:238: warning: Member gtoA() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:239: warning: Member gtoA() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:240: warning: Member gtoC() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:241: warning: Member gtoC() const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:242: warning: Member gtoCN() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:248: warning: Member moMatrix(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:256: warning: Member moMatrix(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:264: warning: Member moEnergy(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:272: warning: Member moEnergy(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:280: warning: Member moOccupancy(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:288: warning: Member moOccupancy(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:296: warning: Member moNumber(ElectronType type=Paired) (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:304: warning: Member moNumber(ElectronType type=Paired) const (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:312: warning: Member densityMatrix() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussianset.h:313: warning: Member spinDensityMatrix() (function) of class Avogadro::Core::GaussianSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/gaussiansettools.h:35: warning: Member GaussianSetTools(Molecule *mol=nullptr) (function) of class Avogadro::Core::GaussianSetTools is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:31: warning: Member addAtom(size_t layer) (function) of class Avogadro::Core::Layer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:32: warning: Member addAtom(size_t layer, Index atom) (function) of class Avogadro::Core::Layer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:33: warning: Member addAtomToActiveLayer(Index atom) (function) of class Avogadro::Core::Layer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:34: warning: Member removeAtom(Index atom) (function) of class Avogadro::Core::Layer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layer.h:35: warning: Member removeLayer(size_t layer) (function) of class Avogadro::Core::Layer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:34: warning: Member LayerData(std::string save="") (function) of class Avogadro::Core::LayerData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:49: warning: Member boolToString(bool b) (function) of class Avogadro::Core::LayerData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:50: warning: Member stringToBool(std::string b) (function) of class Avogadro::Core::LayerData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:51: warning: Member m_save (variable) of class Avogadro::Core::LayerData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:213: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:214: warning: Member layer(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:274: warning: Member label(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:275: warning: Member setLabel(const Core::Array< std::string > &label) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:276: warning: Member setLabel(Index atomId, const std::string &label) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:309: warning: Member addAtom(unsigned char atomicNumber, Vector3 position3d) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:407: warning: Member mesh(Index index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:408: warning: Member mesh(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:410: warning: Member meshCount() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:412: warning: Member clearMeshes() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:420: warning: Member cube(Index index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:421: warning: Member cube(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:423: warning: Member cubeCount() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:425: warning: Member clearCubes() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:432: warning: Member cubes() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:487: warning: Member basisSet() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:508: warning: Member vibrationFrequencies() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:509: warning: Member setVibrationFrequencies(const Array< double > &freq) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:510: warning: Member vibrationIRIntensities() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:511: warning: Member setVibrationIRIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:512: warning: Member vibrationRamanIntensities() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:513: warning: Member setVibrationRamanIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:514: warning: Member vibrationLx(int mode) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:515: warning: Member setVibrationLx(const Array< Array< Vector3 > > &lx) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:536: warning: Member perceiveBondOrders() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:544: warning: Member coordinate3dCount() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:545: warning: Member setCoordinate3d(int coord) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:546: warning: Member coordinate3d(int index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:547: warning: Member setCoordinate3d(const Array< Vector3 > &coords, int index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:553: warning: Member timeStep(int index, bool &status) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:584: warning: Member addResidue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:585: warning: Member addResidue(Residue &residue) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:586: warning: Member residue(Index index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:588: warning: Member residues() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:589: warning: Member residues() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:714: warning: Member frozenAtomMask() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:721: warning: Member getAtomBonds(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:722: warning: Member getAtomOrders(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:726: warning: Member removeBonds(Index atom) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:728: warning: Member addBonds(const Array< std::pair< Index, Index > > &bonds, const Array< unsigned char > &orders) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:732: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:734: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:736: warning: Member getAtomsAtLayer(size_t layer) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:738: warning: Member layer() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:739: warning: Member layer() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:724: warning: Member makeBondPair(const Index &a, const Index &b) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:752: warning: Member m_data (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:755: warning: Member m_customElementMap (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:758: warning: Member m_positions2d (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:759: warning: Member m_positions3d (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:760: warning: Member m_label (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:762: warning: Member m_timesteps (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:763: warning: Member m_hybridizations (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:764: warning: Member m_formalCharges (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:765: warning: Member m_forceVectors (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:766: warning: Member m_colors (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:768: warning: Member m_vibrationFrequencies (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:769: warning: Member m_vibrationIRIntensities (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:770: warning: Member m_vibrationRamanIntensities (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:771: warning: Member m_vibrationLx (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:774: warning: Member m_selectedAtoms (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:776: warning: Member m_meshes (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:777: warning: Member m_cubes (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:779: warning: Member m_basisSet (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:780: warning: Member m_unitCell (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:781: warning: Member m_residues (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:784: warning: Member m_hallNumber (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786: warning: Member m_frozenAtomMask (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:70: warning: Member MoleculeInfo(const Molecule *m) (function) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:76: warning: Member clear() (function) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:62: warning: Member mol (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:63: warning: Member visible (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:64: warning: Member locked (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:65: warning: Member enable (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:66: warning: Member settings (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:67: warning: Member layer (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:68: warning: Member loaded (variable) of class Avogadro::Core::MoleculeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/nameatomtyper.h:26: warning: Member NameAtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::NameAtomTyper is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class AtomTyper< std::string > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class AtomTyper< std::string > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:60: warning: Member m_maxDistance (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:61: warning: Member m_binCount (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:62: warning: Member m_bins (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:63: warning: Member m_minPos (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:64: warning: Member m_maxPos (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:65: warning: Member m_cachedArray (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/neighborperceiver.h:66: warning: Member m_cachedIndex (variable) of class Avogadro::Core::NeighborPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:39: warning: Member SecondaryStructure (enumeration) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:55: warning: Member Residue(std::string &name) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:56: warning: Member Residue(std::string &name, Index &number) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:57: warning: Member Residue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:59: warning: Member Residue(const Residue &other) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:61: warning: Member operator=(Residue other) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:65: warning: Member residueName() const (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:67: warning: Member setResidueName(std::string &name) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:69: warning: Member residueId() const (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:71: warning: Member setResidueId(Index &number) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:73: warning: Member chainId() const (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:75: warning: Member setChainId(const char &id) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:77: warning: Member secondaryStructure() const (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:82: warning: Member setSecondaryStructure(const SecondaryStructure &ss) (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:120: warning: Member hasAtomByIndex(Index index) const (function) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:138: warning: Member m_residueName (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:139: warning: Member m_residueId (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:140: warning: Member m_chainId (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:141: warning: Member m_atomNameMap (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:142: warning: Member m_heterogen (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:143: warning: Member m_color (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:144: warning: Member m_customColorSet (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residue.h:145: warning: Member m_secondaryStructure (variable) of class Avogadro::Core::Residue is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:21: warning: Member ResidueData(std::string name, std::map< std::string, int > atomNames, std::vector< std::pair< std::string, std::string > > singleBonds, std::vector< std::pair< std::string, std::string > > doubleBonds) (function) of class Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:31: warning: Member ResidueData(const ResidueData &other) (function) of class Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:39: warning: Member operator=(ResidueData other) (function) of class Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:46: warning: Member residueAtoms() (function) of class Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:48: warning: Member residueSingleBonds() (function) of class Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/residuedata.h:53: warning: Member residueDoubleBonds() (function) of class Avogadro::Core::ResidueData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:23: warning: Member RingPerceiver(const Molecule *m=nullptr) (function) of class Avogadro::Core::RingPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:27: warning: Member setMolecule(const Molecule *m) (function) of class Avogadro::Core::RingPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:28: warning: Member molecule() const (function) of class Avogadro::Core::RingPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/ringperceiver.h:31: warning: Member rings() (function) of class Avogadro::Core::RingPerceiver is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:40: warning: Member SecondaryStructureAssigner(Molecule *m=nullptr) (function) of class Avogadro::Core::SecondaryStructureAssigner is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/secondarystructure.h:43: warning: Member assign(Molecule *mol) (function) of class Avogadro::Core::SecondaryStructureAssigner is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:137: warning: Member slaterTypes() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:138: warning: Member zetas() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:139: warning: Member factors() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:140: warning: Member PQNs() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:141: warning: Member normalizedMatrix() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:142: warning: Member densityMatrix() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slaterset.h:144: warning: Member outputAll() (function) of class Avogadro::Core::SlaterSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/basisset.h:82: warning: Member molecule() const (function) of class Avogadro::Core::BasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/slatersettools.h:33: warning: Member SlaterSetTools(Molecule *mol=nullptr) (function) of class Avogadro::Core::SlaterSetTools is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/symbolatomtyper.h:26: warning: Member SymbolAtomTyper(const Molecule *mol=nullptr) (function) of class Avogadro::Core::SymbolAtomTyper is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:27: warning: Member AtomTyper(const Molecule *mol=nullptr) (function) of class AtomTyper< std::string > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atomtyper.h:25: warning: Member ValueType (typedef) of class AtomTyper< std::string > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:27: warning: Member UnitCell(Real a, Real b, Real c, Real alpha, Real beta, Real gamma) (function) of class Avogadro::Core::UnitCell is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:28: warning: Member UnitCell(const Vector3 &a, const Vector3 &b, const Vector3 &c) (function) of class Avogadro::Core::UnitCell is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:29: warning: Member UnitCell(const Matrix3 &cellMatrix) (function) of class Avogadro::Core::UnitCell is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:30: warning: Member UnitCell(const UnitCell &other) (function) of class Avogadro::Core::UnitCell is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:32: warning: Member operator=(UnitCell other) (function) of class Avogadro::Core::UnitCell is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/unitcell.h:89: warning: Member setFractionalMatrix(const Matrix3 &m) (function) of class Avogadro::Core::UnitCell is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant.h:31: warning: Member Type (enumeration) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant.h:127: warning: Member operator=(const Variant &variant) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:62: warning: Member setValue(bool v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:73: warning: Member setValue(char v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:84: warning: Member setValue(short v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:95: warning: Member setValue(int v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:106: warning: Member setValue(long v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:117: warning: Member setValue(float v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:128: warning: Member setValue(double v) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:139: warning: Member setValue(std::string string) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:150: warning: Member setValue(const char *string) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:156: warning: Member setValue(void *pointer) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:167: warning: Member setValue(MatrixX matrix) (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:184: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:195: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:206: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:217: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:234: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:247: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:262: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:277: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:286: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:304: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variant-inline.h:313: warning: Member value() const (function) of class Avogadro::Core::Variant is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.h:29: warning: Member iterator (typedef) of class Avogadro::Core::VariantMap is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/variantmap.h:30: warning: Member const_iterator (typedef) of class Avogadro::Core::VariantMap is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:25: warning: Member ValueType (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:26: warning: Member Parent (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:29: warning: Member value_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:30: warning: Member allocator_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:31: warning: Member reference (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:32: warning: Member const_reference (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:33: warning: Member pointer (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:34: warning: Member const_pointer (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:35: warning: Member iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:36: warning: Member const_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:37: warning: Member reverse_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:38: warning: Member const_reverse_iterator (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:39: warning: Member difference_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:40: warning: Member size_type (typedef) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:44: warning: Member ArrayRefContainer(const size_t n, const ValueType &value=ValueType()) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:49: warning: Member ArrayRefContainer(const ArrayRefContainer &other) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:53: warning: Member ArrayRefContainer(InputIterator first, InputIterator last) (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:58: warning: Member reref() (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:62: warning: Member deref() (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:69: warning: Member ref() const (function) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:72: warning: Member m_ref (variable) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/array.h:74: warning: Member data (variable) of class Avogadro::Core::internal::ArrayRefContainer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:39: warning: Member operator()(const std::string &s1, const std::string &s2) const noexcept (function) of struct Avogadro::Io::CaseInsensitiveComparator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:34: warning: Member operator()(const unsigned char &c1, const unsigned char &c2) const (function) of struct Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
>...
Generating docs for compound Avogadro::TypeTraits< unsigned int >...
Generating docs for compound Avogadro::TypeTraits< unsigned short >...
Generating docs for compound Avogadro::Calc::ChargeManager...
Generating docs for compound Avogadro::Calc::ChargeModel...
Generating docs for compound Avogadro::Calc::DefaultModel...
Generating docs for compound Avogadro::Calc::EnergyCalculator...
Generating docs for compound Avogadro::Calc::EnergyManager...
Generating docs for compound Avogadro::Calc::LennardJones...
Generating docs for namespace Avogadro::Core
Generating docs for compound Avogadro::Core::AngleIterator...
Generating docs for compound Avogadro::Core::Array...
Generating docs for compound Avogadro::Core::ArraySet...
Generating docs for nested compound Avogadro::Core::ArraySet::Holder...
Generating docs for nested compound Avogadro::Core::ArraySet::PlaceHolder...
Generating docs for compound Avogadro::Core::Atom...
Generating docs for compound Avogadro::Core::AtomTemplate...
Generating docs for compound Avogadro::Core::AtomTyper...
Generating docs for compound Avogadro::Core::AtomUtilities...
Generating docs for compound Avogadro::Core::AvoSpglib...
Generating docs for compound Avogadro::Core::BasisSet...
Generating docs for compound Avogadro::Core::Bond...
Generating docs for compound Avogadro::Core::BondTemplate...
Generating docs for compound Avogadro::Core::Color3f...
Generating docs for compound Avogadro::Core::CoordinateBlockGenerator...
Generating docs for compound Avogadro::Core::CoordinateSet...
Generating docs for compound Avogadro::Core::CrystalTools...
Generating docs for compound Avogadro::Core::Cube...
Generating docs for compound Avogadro::Core::DihedralIterator...
Generating docs for compound Avogadro::Core::Elements...
Generating docs for compound Avogadro::Core::GaussianSet...
Generating docs for compound Avogadro::Core::GaussianSetTools...
Generating docs for compound Avogadro::Core::Graph...
Generating docs for compound Avogadro::Core::hBondRecord...
Generating docs for compound Avogadro::Core::Layer...
Generating docs for compound Avogadro::Core::LayerData...
Generating docs for compound Avogadro::Core::LayerManager...
Generating docs for compound Avogadro::Core::Mesh...
Generating docs for compound Avogadro::Core::Molecule...
Generating docs for compound Avogadro::Core::MoleculeInfo...
Generating docs for compound Avogadro::Core::Mutex...
Generating docs for compound Avogadro::Core::NameAtomTyper...
Generating docs for compound Avogadro::Core::NeighborPerceiver...
Generating docs for compound Avogadro::Core::Residue...
Generating docs for compound Avogadro::Core::ResidueData...
Generating docs for compound Avogadro::Core::RingPerceiver...
Generating docs for compound Avogadro::Core::SecondaryStructureAssigner...
Generating docs for compound Avogadro::Core::SharedMutex...
Generating docs for compound Avogadro::Core::SlaterSet...
Generating docs for compound Avogadro::Core::SlaterSetTools...
Generating docs for compound Avogadro::Core::SpaceGroups...
Generating docs for compound Avogadro::Core::SymbolAtomTyper...
Generating docs for compound Avogadro::Core::UnitCell...
Generating docs for compound Avogadro::Core::Variant...
Generating docs for compound Avogadro::Core::VariantMap...
Generating docs for compound Avogadro::Core::internal::ArrayRefContainer...
Generating docs for compound Avogadro::Io::CaseInsensitiveComparator...
Generating docs for nested compound Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare...
Generating docs for compound Avogadro::Io::CjsonFormat...
Generating docs for compound Avogadro::Io::CmlFormat...
Generating docs for compound Avogadro::Io::DcdFormat...
Generating docs for compound Avogadro::Io::FileFormat...
Generating docs for compound Avogadro::Io::FileFormatManager...
Generating docs for compound Avogadro::Io::GromacsFormat...
Generating docs for compound Avogadro::Io::Hdf5DataFormat...
Generating docs for compound Avogadro::Io::LammpsDataFormat...
Generating docs for compound Avogadro::Io::LammpsTrajectoryFormat...
Generating docs for compound Avogadro::/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/pdbformat.h:56: warning: Member perceiveSubstitutedCations(Core::Molecule &molecule) (function) of class Avogadro::Io::PdbFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:82: warning: Member BatchJob(const QString &scriptFilePath, QObject *parent=nullptr) (function) of class Avogadro::MoleQueue::BatchJob is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:62: warning: Member InvalidBatchId (variable) of class Avogadro::MoleQueue::BatchJob is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:68: warning: Member InvalidRequestId (variable) of class Avogadro::MoleQueue::BatchJob is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/batchjob.h:75: warning: Member InvalidServerId (variable) of class Avogadro::MoleQueue::BatchJob is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:38: warning: Member Client(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::Client is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:227: warning: Member MessageType (enumeration) of class Avogadro::MoleQueue::Client is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:238: warning: Member m_jsonRpcClient (variable) of class Avogadro::MoleQueue::Client is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:239: warning: Member m_requests (variable) of class Avogadro::MoleQueue::Client is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:126: warning: Unsupported xml/html tag <rpcMethod> found
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h:459: warning: Member InputGenerator(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h:454: warning: The following parameter of Avogadro::MoleQueue::InputGenerator::InputGenerator(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h:37: warning: Member InputGeneratorDialog(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGeneratorDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgeneratordialog.h:38: warning: Member InputGeneratorDialog(const QString &scriptFileName, QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::InputGeneratorDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:126: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:127: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:128: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:129: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:131: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:132: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:133: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:134: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:135: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:136: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jobobject.h:148: warning: Member m_value (variable) of class Avogadro::MoleQueue::JobObject is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h:48: warning: Member JsonRpcClient(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::JsonRpcClient is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h:136: warning: Member m_packetCounter (variable) of class Avogadro::MoleQueue::JsonRpcClient is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/jsonrpcclient.h:137: warning: Member m_socket (variable) of class Avogadro::MoleQueue::JsonRpcClient is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h:153: warning: Member done(int r) override (slot) of class Avogadro::MoleQueue::MoleQueueDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuedialog.h:34: warning: Member MoleQueueDialog(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuemanager.h:35: warning: Member MoleQueueManager(QObject *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:85: warning: Member data(const QModelIndex &idx, int role) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:86: warning: Member flags(const QModelIndex &idx=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:87: warning: Member headerData(int section, Qt::Orientation orientation, int role) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:89: warning: Member index(int row, int column, const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:91: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:92: warning: Member rowCount(const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuequeuelistmodel.h:93: warning: Member columnCount(const QModelIndex &parent_=QModelIndex()) const override (function) of class Avogadro::MoleQueue::MoleQueueQueueListModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h:33: warning: Member MoleQueueWidget(QWidget *parent_=nullptr) (function) of class Avogadro::MoleQueue::MoleQueueWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/molequeuewidget.h:127: warning: Member batchMode() const (function) of class Avogadro::MoleQueue::MoleQueueWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:37: warning: Member ColorButton(QWidget *parent=0) (function) of class Avogadro::QtGui::ColorButton is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:38: warning: Member ColorButton(const QColor &initial, QWidget *parent=0) (function) of class Avogadro::QtGui::ColorButton is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: argument 'custom' of command @param is not found in the argument list of ColorButton::setDialogTitle(const QString title="")
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: The following parameter of Avogadro::QtGui::ColorButton::setDialogTitle(const QString title="") is not documented:
  parameter 'title'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:41: warning: Member splitVertical() (signal) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:42: warning: Member splitHorizontal() (signal) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:43: warning: Member closeView() (signal) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:30: warning: Member ContainerWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:34: warning: Member setViewWidget(QWidget *widget) (function) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:35: warning: Member viewWidget() (function) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:37: warning: Member setActive(bool active) (function) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/containerwidget.h:38: warning: Member isActive() const (function) of class Avogadro::QtGui::ContainerWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/customelementdialog.h:31: warning: Member CustomElementDialog(Molecule &mol, QWidget *parent=nullptr) (function) of class Avogadro::QtGui::CustomElementDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/extensionplugin.h:44: warning: Member ExtensionPlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ExtensionPlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:25: warning: Member Mode (enumeration) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:48: warning: Member setFileName(const QString &fname) (slot) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:45: warning: Member fileNameChanged(const QString &filename) (signal) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:31: warning: Member FileBrowseWidget(QWidget *theParent=nullptr) (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:34: warning: Member fileName() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:36: warning: Member validFileName() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:38: warning: Member browseButton() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:39: warning: Member lineEdit() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:41: warning: Member setMode(Mode m) (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/filebrowsewidget.h:42: warning: Member mode() const (function) of class Avogadro::QtGui::FileBrowseWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/generichighlighter.h:91: warning: Member highlightBlock(const QString &text) override (function) of class Avogadro::QtGui::GenericHighlighter is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h:77: warning: The following parameters of Avogadro::QtGui::HydrogenTools::generateNewHydrogenPositions(const RWAtom &atom, int numberOfHydrogens, std::vector< Vector3 > &positions) are not documented:
  parameter 'atom'
  parameter 'numberOfHydrogens'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:612: warning: Member finished() (signal) of class Avogadro::QtGui::InterfaceScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:457: warning: Member InterfaceScript(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::InterfaceScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:452: warning: The following parameter of Avogadro::QtGui::InterfaceScript::InterfaceScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:126: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:127: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:128: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:129: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:131: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:132: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:133: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:134: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:135: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:136: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:68: warning: Member isEmpty() const (function) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:126: warning: Member m_molecule (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:127: warning: Member m_options (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:128: warning: Member m_optionCache (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:129: warning: Member m_dirtyTextEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:131: warning: Member m_empty (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:132: warning: Member m_batchMode (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:133: warning: Member m_currentLayout (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:134: warning: Member m_centralWidget (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:135: warning: Member m_widgets (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/jsonwidget.h:136: warning: Member m_textEdits (variable) of class Avogadro::QtGui::JsonWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:31: warning: Member ColumnType (enumeration) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:68: warning: Member updateRows() (slot) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:40: warning: Member LayerModel(QObject *p=0) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:42: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:43: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:44: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:46: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:48: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:50: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:52: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:55: warning: Member addItem() (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:56: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:57: warning: Member addMolecule(const Molecule *mol) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:58: warning: Member setActiveLayer(int index, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:59: warning: Member removeItem(int row, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:61: warning: Member items() const (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:63: warning: Member flipVisible(size_t row) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:64: warning: Member flipLocked(size_t row) (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/layermodel.h:65: warning: Member layerCount() const (function) of class Avogadro::QtGui::LayerModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:29: warning: Member removeLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:30: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:31: warning: Member setActiveLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:132: warning: Member duplicate(const Vector3i &c, const Vector3f &pos) (function) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:139: warning: Member m_iso (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:147: warning: Member m_normals (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:148: warning: Member m_indices (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:149: warning: Member m_progmin (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:150: warning: Member m_progmax (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:158: warning: Member a2iVertexOffset[8][3] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:159: warning: Member a2iEdgeConnection[12][2] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:160: warning: Member a2fEdgeDirection[12][3] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:161: warning: Member a2iTetrahedronEdgeConnection[6][2] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:162: warning: Member a2iTetrahedronsInACube[6][4] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:163: warning: Member aiTetrahedronEdgeFlags[16] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:164: warning: Member a2iTetrahedronTriangles[16][7] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:165: warning: Member aiCubeEdgeFlags[256] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:166: warning: Member a2iTriangleConnectionTable[256][16] (variable) of class Avogadro::QtGui::MeshGenerator is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:52: warning: The following parameters of Avogadro::QtGui::MeshGenerator::MeshGenerator(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false, QObject *parent=nullptr) are not documented:
  parameter 'reverse'
  parameter 'parent'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:52: warning: found documented return type for Avogadro::QtGui::MeshGenerator::MeshGenerator that does not return anything
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:68: warning: The following parameter of Avogadro::QtGui::MeshGenerator::initialize(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false) is not documented:
  parameter 'reverse'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:125: warning: The following parameter of Avogadro::QtGui::MeshGenerator::offset(float val1, float val2) is not documented:
  parameter 'val2'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:48: warning: Member Molecule(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:96: warning: Member addAtom(unsigned char number, Vector3 position3d, Index uniqueId=MaxIndex) (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:133: warning: Member atomUniqueIds() (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:155: warning: Member addBonds(const Core::Array< std::pair< Index, Index > > &bonds, const Core::Array< unsigned char > &orders) (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:228: warning: Member bondUniqueIds() (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:230: warning: Member findAtomUniqueId(Index index) const (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:231: warning: Member findBondUniqueId(Index index) const (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:233: warning: Member undoMolecule() (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:235: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:236: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::QtGui::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:213: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:214: warning: Member layer(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:274: warning: Member label(Index atomId) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:275: warning: Member setLabel(const Core::Array< std::string > &label) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:276: warning: Member setLabel(Index atomId, const std::string &label) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:309: warning: Member addAtom(unsigned char atomicNumber, Vector3 position3d) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:407: warning: Member mesh(Index index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:408: warning: Member mesh(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:410: warning: Member meshCount() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:412: warning: Member clearMeshes() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:420: warning: Member cube(Index index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:421: warning: Member cube(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:423: warning: Member cubeCount() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:425: warning: Member clearCubes() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:432: warning: Member cubes() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:487: warning: Member basisSet() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:508: warning: Member vibrationFrequencies() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:509: warning: Member setVibrationFrequencies(const Array< double > &freq) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:510: warning: Member vibrationIRIntensities() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:511: warning: Member setVibrationIRIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:512: warning: Member vibrationRamanIntensities() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:513: warning: Member setVibrationRamanIntensities(const Array< double > &intensities) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:514: warning: Member vibrationLx(int mode) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:515: warning: Member setVibrationLx(const Array< Array< Vector3 > > &lx) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:536: warning: Member perceiveBondOrders() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:544: warning: Member coordinate3dCount() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:545: warning: Member setCoordinate3d(int coord) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:546: warning: Member coordinate3d(int index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:547: warning: Member setCoordinate3d(const Array< Vector3 > &coords, int index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:553: warning: Member timeStep(int index, bool &status) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:584: warning: Member addResidue(std::string &name, Index &number, char &id) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:585: warning: Member addResidue(Residue &residue) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:586: warning: Member residue(Index index) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:588: warning: Member residues() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:589: warning: Member residues() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:714: warning: Member frozenAtomMask() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:721: warning: Member getAtomBonds(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:722: warning: Member getAtomOrders(Index index) const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:726: warning: Member removeBonds(Index atom) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:728: warning: Member addBonds(const Array< std::pair< Index, Index > > &bonds, const Array< unsigned char > &orders) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:732: warning: Member swapBond(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:734: warning: Member swapAtom(Index a, Index b) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:736: warning: Member getAtomsAtLayer(size_t layer) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:738: warning: Member layer() (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:739: warning: Member layer() const (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:724: warning: Member makeBondPair(const Index &a, const Index &b) (function) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:752: warning: Member m_data (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:755: warning: Member m_customElementMap (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:758: warning: Member m_positions2d (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:759: warning: Member m_positions3d (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:760: warning: Member m_label (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:762: warning: Member m_timesteps (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:763: warning: Member m_hybridizations (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:764: warning: Member m_formalCharges (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:765: warning: Member m_forceVectors (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:766: warning: Member m_colors (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:768: warning: Member m_vibrationFrequencies (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:769: warning: Member m_vibrationIRIntensities (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:770: warning: Member m_vibrationRamanIntensities (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:771: warning: Member m_vibrationLx (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:774: warning: Member m_selectedAtoms (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:776: warning: Member m_meshes (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:777: warning: Member m_cubes (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:779: warning: Member m_basisSet (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:780: warning: Member m_unitCell (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:781: warning: Member m_residues (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:784: warning: Member m_hallNumber (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/molecule.h:786: warning: Member m_frozenAtomMask (variable) of class Avogadro::Core::Molecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'a' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'b' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: The following parameters of Avogadro::QtGui::Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) are not documented:
  parameter 'atomId1'
  parameter 'atomId2'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:66: warning: Member setActiveMolecule(QObject *active) (slot) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:67: warning: Member addItem(Avogadro::QtGui::Molecule *item) (slot) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:68: warning: Member removeItem(Avogadro::QtGui::Molecule *item) (slot) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:69: warning: Member itemChanged() (slot) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:63: warning: Member moleculeStateChanged(Avogadro::QtGui::Molecule *) (signal) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:40: warning: Member MoleculeModel(QObject *p=nullptr) (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:42: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:43: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:44: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:46: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:48: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:50: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:52: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:55: warning: Member clear() (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:57: warning: Member molecules() const (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:58: warning: Member activeMolecules() const (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:60: warning: Member activeMolecule() const (function) of class Avogadro::QtGui::MoleculeModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:23: warning: Member m_molecule (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:24: warning: Member m_modelView (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:25: warning: Member m_dirty (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/moleculemodel.h:26: warning: Member m_active (variable) of struct Avogadro::QtGui::MoleculeSystem is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:53: warning: Member splitHorizontal() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:54: warning: Member splitVertical() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:55: warning: Member createView() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:56: warning: Member removeView() (slot) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:50: warning: Member activeWidgetChanged(QWidget *widget) (signal) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:33: warning: Member MultiViewWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:37: warning: Member addWidget(QWidget *widget) (function) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:44: warning: Member setActiveWidget(QWidget *widget) (function) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:46: warning: Member setFactory(ViewFactory *factory) (function) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/multiviewwidget.h:47: warning: Member setDefaultView(const QString &viewName) (function) of class Avogadro::QtGui::MultiViewWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h:24: warning: Member MoleculeType (typedef) of class Avogadro::QtGui::PersistentAtom is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentatom.h:25: warning: Member AtomType (typedef) of class Avogadro::QtGui::PersistentAtom is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h:24: warning: Member MoleculeType (typedef) of class Avogadro::QtGui::PersistentBond is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/persistentbond.h:25: warning: Member BondType (typedef) of class Avogadro::QtGui::PersistentBond is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h:26: warning: Member PluginLayerManager(const std::string &name="undef") (function) of class Avogadro::QtGui::PluginLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pluginlayermanager.h:32: warning: Member atomLocked(size_t atom) const (function) of class Avogadro::QtGui::PluginLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:139: warning: Member m_debug (variable) of class Avogadro::QtGui::PythonScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:140: warning: Member m_pythonInterpreter (variable) of class Avogadro::QtGui::PythonScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:141: warning: Member m_scriptFilePath (variable) of class Avogadro::QtGui::PythonScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:142: warning: Member m_errors (variable) of class Avogadro::QtGui::PythonScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:143: warning: Member m_process (variable) of class Avogadro::QtGui::PythonScript is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: argument 'scriptFilePath_' of command @param is not found in the argument list of PythonScript::PythonScript(QObject *parent_=nullptr)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
Io::MdlFormat...
Generating docs for compound Avogadro::Io::MMTFFormat...
Generating docs for compound Avogadro::Io::OutcarFormat...
Generating docs for compound Avogadro::Io::PdbFormat...
Generating docs for compound Avogadro::Io::PoscarFormat...
Generating docs for compound Avogadro::Io::TrrFormat...
Generating docs for compound Avogadro::Io::TurbomoleFormat...
Generating docs for compound Avogadro::Io::XyzFormat...
Generating docs for compound Avogadro::MoleQueue::BatchJob...
Generating docs for compound Avogadro::MoleQueue::Client...
Generating docs for compound Avogadro::MoleQueue::InputGenerator...
Generating docs for compound Avogadro::MoleQueue::InputGeneratorDialog...
Generating docs for compound Avogadro::MoleQueue::InputGeneratorWidget...
Generating docs for compound Avogadro::MoleQueue::JobObject...
Generating docs for compound Avogadro::MoleQueue::JsonRpcClient...
Generating docs for compound Avogadro::MoleQueue::MoleQueueDialog...
Generating docs for compound Avogadro::MoleQueue::MoleQueueManager...
Generating docs for compound Avogadro::MoleQueue::MoleQueueQueueListModel...
Generating docs for compound Avogadro::MoleQueue::MoleQueueWidget...
Generating docs for compound Avogadro::QtGui::BackgroundFileFormat...
Generating docs for compound Avogadro::QtGui::ColorButton...
Generating docs for compound Avogadro::QtGui::ContainerWidget...
Generating docs for compound Avogadro::QtGui::CustomElementDialog...
Generating docs for compound Avogadro::QtGui::ElementDetail...
Generating docs for compound Avogadro::QtGui::ElementItem...
Generating docs for compound Avogadro::QtGui::ElementTranslator...
Generating docs for compound Avogadro::QtGui::ExtensionPlugin...
Generating docs for compound Avogadro::QtGui::ExtensionPluginFactory...
Generating docs for compound Avogadro::QtGui::FileBrowseWidget...
Generating docs for compound Avogadro::QtGui::FileFormatDialog...
Generating docs for compound Avogadro::QtGui::GenericHighlighter...
Generating docs for nested compound Avogadro::QtGui::GenericHighlighter::Rule...
Generating docs for compound Avogadro::QtGui::HydrogenTools...
Generating docs for compound Avogadro::QtGui::InterfaceScript...
Generating docs for compound Avogadro::QtGui::InterfaceWidget...
Generating docs for compound Avogadro::QtGui::JsonWidget...
Generating docs for compound Avogadro::QtGui::LayerModel...
Generating docs for compound Avogadro::QtGui::MeshGenerator...
Generating docs for compound Avogadro::QtGui::Molecule...
Generating docs for compound Avogadro::QtGui::MoleculeModel...
Generating docs for compound Avogadro::QtGui::MoleculeSystem...
Generating docs for compound Avogadro::QtGui::MultiViewWidget...
Generating docs for compound Avogadro::QtGui::PeriodicTableScene...
Generating docs for compound Avogadro::QtGui::PeriodicTableView...
Generating docs for compound Avogadro::QtGui::PersistentAtom...
Generating docs for compound Avogadro::QtGui::PersistentBond...
Generating docs for compound Avogadro::QtGui::PluginLayerManager...
Generating docs for compound Avogadro::QtGui::PythonScript...
Generating docs for compound Avogadro::QtGui::RWAtom...
Generating docs for compound Avogadro::QtGui::RWBond...
Generating docs for compound Avogadro::QtGui::RWLayerManager...
Generating docs for compound Avogadro::QtGui::RWMolecule...
Generating docs for nested compound Avogadro::QtGui::RWMolecule::UndoCommand...
Generating docs for compound Avogadro::QtGui::ScenePlugin...
Generating docs for compound Avogadro::QtGui::ScenePluginFactory...
Generating docs for compound Avogadro::QtGui::ScenePluginModel...
Generating docs for compound Avogadro::QtGui::ScriptLoader...
Generating docs for compound Avogadro::QtGui::ToolPlugin...
Generating docs for compound Avogadro::QtGui::ToolPluginFactory...
Generating docs for compound Avogadro::QtGui::ViewFactory...
Generating docs for compound Avogadro::QtOpenGL::ActiveObjects...
Generating docs for compound Avogadro::QtOpenGL::GLWidget...
Generating docs for compound Avogadro::QtOpenGL::QtTextRenderStrategy...
Generating docs for compound Avogadro::QuantumIO::GamessukOut...
Ge/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:675: warning: Member RWAtom(RWMolecule *m, Index i) (function) of class Avogadro::QtGui::RWAtom is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:176: warning: Member selected() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:184: warning: Member forceVector() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:186: warning: Member setLabel(const std::string &label) (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:187: warning: Member label() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:117: warning: Member atomicNumber() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:128: warning: Member position2d() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:136: warning: Member position3d() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:144: warning: Member hybridization() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:152: warning: Member formalCharge() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:160: warning: Member color() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:168: warning: Member layer() const (function) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:50: warning: Member MoleculeType (typedef) of class AtomTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:682: warning: Member RWBond(RWMolecule *m, Index i) (function) of class Avogadro::QtGui::RWBond is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:93: warning: Member atom2() const (function) of class BondTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:111: warning: Member order() const (function) of class BondTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:26: warning: Member MoleculeType (typedef) of class BondTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:27: warning: Member AtomType (typedef) of class BondTemplate< RWMolecule > is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:29: warning: Member removeLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:30: warning: Member addLayer(RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwlayermanager.h:31: warning: Member setActiveLayer(size_t layer, RWMolecule *rwmolecule) (function) of class Avogadro::QtGui::RWLayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:115: warning: Member m_activeMolecule (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/layermanager.h:116: warning: Member m_molToInfo (variable) of class Avogadro::Core::LayerManager is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:75: warning: Member molecule() (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:76: warning: Member molecule() const (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:226: warning: Member label(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:227: warning: Member setLabel(Index atomId, const std::string &label, const QString &undoText=tr("Change Atom Label")) (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:241: warning: Member setAtomPosition2d(Index, const Vector2 &) (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:242: warning: Member atomPosition2d(Index) (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:243: warning: Member atomPositions2d() const (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:298: warning: Member setLayer(Index atomId, size_t layer) (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:299: warning: Member layer(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:656: warning: Member findAtomUniqueId(Index atomId) const (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:657: warning: Member findBondUniqueId(Index bondId) const (function) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:664: warning: Member m_interactive (variable) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:666: warning: Member m_undoStack (variable) of class Avogadro::QtGui::RWMolecule is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:628: warning: The following parameter of Avogadro::QtGui::RWMolecule::setForceVector(Index atomId, const Vector3 &pos, const QString &undoText=QStringLiteral("Change Force Vectors")) is not documented:
  parameter 'atomId'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:30: warning: Member UndoCommand(RWMolecule &m) (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:36: warning: Member positions3d() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:37: warning: Member atomUniqueIds() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:38: warning: Member bondUniqueIds() (function) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:40: warning: Member m_mol (variable) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule_undo.h:41: warning: Member m_molecule (variable) of class Avogadro::QtGui::RWMolecule::UndoCommand is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:90: warning: Member drawablesChanged() (signal) of class Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:42: warning: Member ScenePlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:51: warning: Member processEditable(const RWMolecule &molecule, Rendering::GroupNode &node) (function) of class Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:80: warning: Member setupWidget() (function) of class Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:87: warning: Member defaultBehavior() const (function) of class Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/sceneplugin.h:93: warning: Member m_layerManager (variable) of class Avogadro::QtGui::ScenePlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:55: warning: Member addItem(Avogadro::QtGui::ScenePlugin *item) (slot) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:56: warning: Member removeItem(Avogadro::QtGui::ScenePlugin *item) (slot) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:57: warning: Member itemChanged() (slot) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:51: warning: Member pluginStateChanged(Avogadro::QtGui::ScenePlugin *) (signal) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:52: warning: Member pluginConfigChanged() (signal) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:30: warning: Member ScenePluginModel(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:32: warning: Member parent(const QModelIndex &child) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:33: warning: Member rowCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:34: warning: Member columnCount(const QModelIndex &parent) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:36: warning: Member flags(const QModelIndex &index) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:38: warning: Member setData(const QModelIndex &index, const QVariant &value, int role) override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:40: warning: Member data(const QModelIndex &index, int role) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:42: warning: Member index(int row, int column, const QModelIndex &parent=QModelIndex()) const override (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:45: warning: Member clear() (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:47: warning: Member scenePlugins() const (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scenepluginmodel.h:48: warning: Member activeScenePlugins() const (function) of class Avogadro::QtGui::ScenePluginModel is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h:35: warning: Member ScriptLoader(QObject *parent_=nullptr) (function) of class Avogadro::QtGui::ScriptLoader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/scriptloader.h:44: warning: Member queryProgramName(const QString &scriptFilePath, QString &displayName) (function) of class Avogadro::QtGui::ScriptLoader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:140: warning: Member setEditMolecule(QtGui::RWMolecule *) (slot) of class Avogadro::QtGui::ToolPlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:44: warning: Member ToolPlugin(QObject *parent=nullptr) (function) of class Avogadro::QtGui::ToolPlugin is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:169: warning: Member createInstance(QObject *parent=nullptr)=0 (function) of class Avogadro::QtGui::ToolPluginFactory is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/toolplugin.h:170: warning: Member identifier() const =0 (function) of class Avogadro::QtGui::ToolPluginFactory is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h:105: warning: Member rendererInvalid() (signal) of class Avogadro::QtOpenGL::GLWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/glwidget.h:49: warning: Member GLWidget(QWidget *parent=nullptr) (function) of class Avogadro::QtOpenGL::GLWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:80: warning: Member GamessukOut(const QString &filename, GaussianSet *basis) (function) of class Avogadro::QuantumIO::GamessukOut is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:82: warning: Member GamessukOutNoQt(const std::string &filename, GaussianSet *basis) (function) of class Avogadro::QuantumIO::GamessukOut is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:83: warning: Member outputParsedData() (function) of class Avogadro::QuantumIO::GamessukOut is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gaussianfchk.h:54: warning: Member outputAll() (function) of class Avogadro::QuantumIO::GaussianFchk is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:37: warning: Member outputCoord() (function) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:38: warning: Member outputBasis() (function) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:51: warning: Member atomLabels (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:52: warning: Member coordinates (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:54: warning: Member shellLabels (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:55: warning: Member shells (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:58: warning: Member gtoIndicies (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:62: warning: Member gtoExponents (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:63: warning: Member gtoCoefficients (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:66: warning: Member moEnergies (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:68: warning: Member moVectors (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:72: warning: Member nShell (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:73: warning: Member nBasisFunctions (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/gamessukout.h:74: warning: Member nElectrons (variable) of class Avogadro::QuantumIO::GUKBasisSet is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/mopacaux.h:24: warning: Member outputAll() (function) of class Avogadro::QuantumIO::MopacAux is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/nwchemlog.h:24: warning: Member outputAll() (function) of class Avogadro::QuantumIO::NWChemLog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformat.h:61: warning: Member Operations (typedef) of class Avogadro::Io::FileFormat is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h:37: warning: Member AmbientOcclusionSphereGeometry(const AmbientOcclusionSphereGeometry &other) (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h:40: warning: Member operator=(AmbientOcclusionSphereGeometry) (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/ambientocclusionspheregeometry.h:81: warning: Member spheres() const (function) of class Avogadro::Rendering::AmbientOcclusionSphereGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:41: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:44: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:38: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:28: warning: Member ArrowGeometry(const ArrowGeometry &other) (function) of class Avogadro::Rendering::ArrowGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:31: warning: Member operator=(ArrowGeometry) (function) of class Avogadro::Rendering::ArrowGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:50: warning: Member drawLine(const Vector3f &start, const Vector3f &end, double lineWidth) (function) of class Avogadro::Rendering::ArrowGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:51: warning: Member drawCone(const Vector3f &base, const Vector3f &cap, double baseRadius, double) (function) of class Avogadro::Rendering::ArrowGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/arrowgeometry.h:25: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::ArrowGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/beziergeometry.h:20: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BezierGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:18: warning: Member BSplineGeometry(bool flat) (function) of class Avogadro::Rendering::BSplineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:21: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BSplineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:31: warning: Member ObjectType (enumeration) of class Avogadro::Rendering::BufferObject is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bufferobject.h:37: warning: Member BufferObject(ObjectType type=ArrayBuffer) (function) of class Avogadro::Rendering::BufferObject is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:44: warning: Member Camera(const Camera &o) (function) of class Avogadro::Rendering::Camera is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:45: warning: Member operator=(const Camera &o) (function) of class Avogadro::Rendering::Camera is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:29: warning: Member Cartoon(float minRadius, float maxRadius) (function) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:32: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, size_t group, size_t id, Core::Residue::SecondaryStructure sec) (function) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:18: warning: Member BSplineGeometry(bool flat) (function) of class Avogadro::Rendering::BSplineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:30: warning: Member ELIPSE_RATIO (variable) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:37: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const override (function) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:41: warning: Member computeScale(size_t index, float t, float scale) const override (function) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/bsplinegeometry.h:21: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const override (function) of class Avogadro::Rendering::BSplineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:43: warning: Member m_type (variable) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:44: warning: Member m_minRadius (variable) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cartoongeometry.h:44: warning: Member m_maxRadius (variable) of class Avogadro::Rendering::Cartoon is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:75: warning: Member ColorNormalVertex(const Vector3ub &c, const Vector3f &n, const Vector3f &v) (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:79: warning: Member colorOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:80: warning: Member normalOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:84: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:69: warning: Member color (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:70: warning: Member unusedAlign (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:71: warning: Member normal (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:72: warning: Member vertex (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:73: warning: Member padding[4] (variable) of struct Avogadro::Rendering::ColorNormalVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:48: warning: Member ColorTextureVertex(const Vector3f &p, const Vector3ub &c, const Vector2f &t, const Vector2f &t2=Vector2f::Zero()) (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:53: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:54: warning: Member colorOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:55: warning: Member textureCoordOffset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:60: warning: Member textureCoord2Offset() (function) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:42: warning: Member vertex (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:43: warning: Member color (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:44: warning: Member unusedAlign (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:45: warning: Member textureCoord (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:46: warning: Member textureCoord2 (variable) of struct Avogadro::Rendering::ColorTextureVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:68: warning: Member CurveGeometry(bool flat) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:80: warning: Member addPoint(const Vector3f &pos, const Vector3ub &color, float radius, size_t group, size_t id) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:82: warning: Member lines() const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:84: warning: Member SKIPPED (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:93: warning: Member update(int index) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:94: warning: Member computeCurvePoint(float t, const std::list< Point * > &points) const =0 (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:96: warning: Member computeCirclePoints(const Eigen::Affine3f &a, const Eigen::Affine3f &b, bool flat) const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:98: warning: Member computeScale(size_t index, float t, float scale) const (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:100: warning: Member processShaderError(bool error) (function) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:87: warning: Member m_lines (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:88: warning: Member m_indexMap (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:89: warning: Member m_shaderInfo (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:90: warning: Member m_dirty (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:91: warning: Member m_canBeFlat (variable) of class Avogadro::Rendering::CurveGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:123: warning: Member position() const (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:124: warning: Member setPosition(const Vector3f &pos) (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:126: warning: Member direction() const (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:127: warning: Member setDirection(const Vector3f &dir) (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:129: warning: Member length() const (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:130: warning: Member setLength(float l) (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:132: warning: Member radius() const (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:133: warning: Member setRadius(float r) (function) of class Avogadro::Rendering::Cylinder is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:18: warning: Member CylinderColor(const Vector3f &pos1, const Vector3f &pos2, float r, const Vector3ub &c, const Vector3ub &c2=Vector3ub::Zero()) (function) of struct Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:27: warning: Member end1 (variable) of struct Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:28: warning: Member end2 (variable) of struct Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:29: warning: Member radius (variable) of struct Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:30: warning: Member color (variable) of struct Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:31: warning: Member color2 (variable) of struct Avogadro::Rendering::CylinderColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:45: warning: Member CylinderGeometry(const CylinderGeometry &other) (function) of class Avogadro::Rendering::CylinderGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:48: warning: Member operator=(CylinderGeometry) (function) of class Avogadro::Rendering::CylinderGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/cylindergeometry.h:127: warning: Member cylinders() const (function) of class Avogadro::Rendering::CylinderGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:38: warning: Member DashedLineGeometry(const DashedLineGeometry &other) (function) of class Avogadro::Rendering::DashedLineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:41: warning: Member operator=(DashedLineGeometry) (function) of class Avogadro::Rendering::DashedLineGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) are not documented:
  parameter 'start'
  parameter 'end'
  parameter 'dashCount'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) are not documented:
  parameter 'start'
  parameter 'end'
  parameter 'dashCount'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) are not documented:
  parameter 'start'
  parameter 'end'
  parameter 'dashCount'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:30: warning: Member PackedVertex(const Vector3f &v, const Vector4ub &c) (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:33: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:34: warning: Member colorOffset() (function) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:27: warning: Member vertex (variable) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:28: warning: Member color (variable) of struct Avogadro::Rendering::DashedLineGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:29: warning: Member projection (variable) of struct Avogadro::Rendering::EigenData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/camera.h:30: warning: Member modelView (variable) of struct Avogadro::Rendering::EigenData is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:70: warning: Member drawables() const (function) of class Avogadro::Rendering::GeometryNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometrynode.h:99: warning: Member m_drawables (variable) of class Avogadro::Rendering::GeometryNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:38: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:39: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:40: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:41: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:42: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:43: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:44: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:45: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:46: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:47: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/geometryvisitor.h:48: warning: Member visit(LineStripGeometry &) override (function) of class Avogadro::Rendering::GeometryVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:89: warning: Member camera() (function) of class Avogadro::Rendering::GLRenderer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:93: warning: Member overlayCamera() (function) of class Avogadro::Rendering::GLRenderer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:97: warning: Member scene() (function) of class Avogadro::Rendering::GLRenderer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:101: warning: Member solidPipeline() (function) of class Avogadro::Rendering::GLRenderer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:112: warning: Member m_perspectiveFrustum (variable) of class Avogadro::Rendering::GLRenderer is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrenderer.h:113: warning: Member m_orthographicFrustum (variable) of class Avogadro::Rendering::GLRenderer is not documented.
nerating docs for compound Avogadro::QuantumIO::GAMESSUSOutput...
Generating docs for compound Avogadro::QuantumIO::GaussianCube...
Generating docs for compound Avogadro::QuantumIO::GaussianFchk...
Generating docs for compound Avogadro::QuantumIO::GenericOutput...
Generating docs for compound Avogadro::QuantumIO::GUKBasisSet...
Generating docs for compound Avogadro::QuantumIO::MoldenFile...
Generating docs for compound Avogadro::QuantumIO::MopacAux...
Generating docs for compound Avogadro::QuantumIO::NWChemJson...
Generating docs for compound Avogadro::QuantumIO::NWChemLog...
Generating docs for compound Avogadro::QuantumIO::ORCAOutput...
Generating docs for compound Avogadro::Rendering::AmbientOcclusionSphereGeometry...
Generating docs for compound Avogadro::Rendering::ArcSector...
Generating docs for compound Avogadro::Rendering::ArcStrip...
Generating docs for compound Avogadro::Rendering::ArrowGeometry...
Generating docs for compound Avogadro::Rendering::BezierGeometry...
Generating docs for compound Avogadro::Rendering::BSplineGeometry...
Generating docs for compound Avogadro::Rendering::BufferObject...
Generating docs for compound Avogadro::Rendering::Camera...
Generating docs for compound Avogadro::Rendering::Cartoon...
Generating docs for compound Avogadro::Rendering::ColorNormalVertex...
Generating docs for compound Avogadro::Rendering::ColorTextureVertex...
Generating docs for compound Avogadro::Rendering::CurveGeometry...
Generating docs for compound Avogadro::Rendering::Cylinder...
Generating docs for compound Avogadro::Rendering::CylinderColor...
Generating docs for compound Avogadro::Rendering::CylinderGeometry...
Generating docs for compound Avogadro::Rendering::DashedLineGeometry...
Generating docs for nested compound Avogadro::Rendering::DashedLineGeometry::PackedVertex...
Generating docs for compound Avogadro::Rendering::Drawable...
Generating docs for compound Avogadro::Rendering::EigenData...
Generating docs for compound Avogadro::Rendering::GeometryNode...
Generating docs for compound Avogadro::Rendering::GeometryVisitor...
Generating docs for compound Avogadro::Rendering::GLRenderer...
Generating docs for compound Avogadro::Rendering::GLRenderVisitor...
Generating docs for compound Avogadro::Rendering::GroupNode...
Generating docs for nested compound Avogadro::Rendering::GroupNode::NodeInfo...
Generating docs for compound Avogadro::Rendering::Identifier...
Generating docs for compound Avogadro::Rendering::Line...
Generating docs for compound Avogadro::Rendering::LineStripGeometry...
Generating docs for nested compound Avogadro::Rendering::LineStripGeometry::PackedVertex...
Generating docs for compound Avogadro::Rendering::MeshGeometry...
Generating docs for nested compound Avogadro::Rendering::MeshGeometry::PackedVertex...
Generating docs for compound Avogadro::Rendering::Node...
Generating docs for compound Avogadro::Rendering::PLYVisitor...
Generating docs for compound Avogadro::Rendering::Point...
Generating docs for compound Avogadro::Rendering::POVRayVisitor...
Generating docs for compound Avogadro::Rendering::Primitive...
Generating docs for nested compound Avogadro::Rendering::Primitive::Identifier...
Generating docs for compound Avogadro::Rendering::Quad...
Generating docs for compound Avogadro::Rendering::QuadOutline...
Generating docs for compound Avogadro::Rendering::Scene...
Generating docs for compound Avogadro::Rendering::Shader...
Generating docs for compound Avogadro::Rendering::ShaderInfo...
Generating docs for compound Avogadro::Rendering::ShaderProgram...
Generating docs for compound Avogadro::Rendering::SolidPipeline...
Generating docs for compound Avogadro::Rendering::Sphere...
Generating docs for compound Avogadro::Rendering::SphereColor...
Generating docs for compound Avogadro::Rendering::SphereGeometry...
Generating docs for compound Avogadro::Rendering::TextLabel2D...
Generating docs for compound Avogadro::Rendering::TextLabel3D...
Generating docs for compound Avogadro::Rendering::TextLabelBase...
Generating docs for compound Avogadro::Rendering::TextProperties...
Generating/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:30: warning: Member GLRenderVisitor(const Camera &camera=Camera(), const TextRenderStrategy *trs=nullptr) (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:47: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:48: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:49: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:50: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:52: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:53: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:54: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:55: warning: Member visit(TextLabel2D &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:56: warning: Member visit(TextLabel3D &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:57: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:59: warning: Member setCamera(const Camera &camera_) (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/glrendervisitor.h:60: warning: Member camera() const (function) of class Avogadro::Rendering::GLRenderVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:28: warning: Member NodeType (enumeration) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:43: warning: Member GroupNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:96: warning: Member children() const (function) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:109: warning: Member clear(NodeType type) (function) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:110: warning: Member m_children (variable) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:54: warning: The following parameter of Avogadro::Rendering::GroupNode::addChild(Node *node, NodeType ui=NodeType::GEOMETRY) is not documented:
  parameter 'ui'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:38: warning: Member NodeInfo(Node *n, NodeType u) (function) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:39: warning: Member ui (variable) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:40: warning: Member node (variable) of struct Avogadro::Rendering::GroupNode::NodeInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:27: warning: Member operator==(const Identifier &other) const (function) of struct Avogadro::Rendering::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:33: warning: Member operator!=(const Identifier &other) const (function) of struct Avogadro::Rendering::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:35: warning: Member isValid() const (function) of struct Avogadro::Rendering::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:37: warning: Member molecule (variable) of struct Avogadro::Rendering::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:38: warning: Member type (variable) of struct Avogadro::Rendering::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:39: warning: Member index (variable) of struct Avogadro::Rendering::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:41: warning: Member Line(float r) (function) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:49: warning: Member add(Point *point) (function) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:54: warning: Member points (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:55: warning: Member dirty (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:56: warning: Member flat (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:57: warning: Member radius (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:58: warning: Member vbo (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:59: warning: Member ibo (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:60: warning: Member numberOfVertices (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:61: warning: Member numberOfIndices (variable) of struct Avogadro::Rendering::Line is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:41: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:44: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:38: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:64: warning: argument 'color' of command @param is not found in the argument list of LineStripGeometry::addLineStrip(const Core::Array< Vector3f > &vertices, float lineWidth)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:30: warning: Member PackedVertex(const Vector3f &v, const Vector4ub &c) (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:34: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:35: warning: Member colorOffset() (function) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:27: warning: Member vertex (variable) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:28: warning: Member color (variable) of struct Avogadro::Rendering::LineStripGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:67: warning: argument 'colors' of command @param is not found in the argument list of MeshGeometry::addVertices(const Core::Array< Vector3f > &vertices, const Core::Array< Vector3f > &normals)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:32: warning: Member PackedVertex(const Vector4ub &c, const Vector3f &n, const Vector3f &v) (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:38: warning: Member colorOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:39: warning: Member normalOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:40: warning: Member vertexOffset() (function) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:27: warning: Member color (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:28: warning: Member normal (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:29: warning: Member vertex (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:30: warning: Member padding[4] (variable) of struct Avogadro::Rendering::MeshGeometry::PackedVertex is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:37: warning: Member PLYVisitor(const Camera &camera) (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:40: warning: Member begin() (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:41: warning: Member end() (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:47: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:48: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:49: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:50: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:52: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:53: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:54: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:55: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:56: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:57: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:59: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:60: warning: Member camera() const (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:62: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:63: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/plyvisitor.h:64: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::PLYVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:30: warning: Member Point(const Vector3f &p, const Vector3ub &c, size_t i) (function) of struct Avogadro::Rendering::Point is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:33: warning: Member pos (variable) of struct Avogadro::Rendering::Point is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:34: warning: Member color (variable) of struct Avogadro::Rendering::Point is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:35: warning: Member id (variable) of struct Avogadro::Rendering::Point is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:29: warning: Member POVRayVisitor(const Camera &camera) (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:32: warning: Member begin() (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:33: warning: Member end() (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:39: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:40: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:41: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:42: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:43: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:44: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:45: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:46: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:47: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:48: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:49: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:51: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:52: warning: Member camera() const (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:54: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:55: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/povrayvisitor.h:56: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::POVRayVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:58: warning: Member operator==(const Identifier &other) const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:64: warning: Member operator!=(const Identifier &other) const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:69: warning: Member isValid() const (function) of struct Avogadro::Rendering::Primitive::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:71: warning: Member molecule (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:72: warning: Member type (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:73: warning: Member index (variable) of struct Avogadro::Rendering::Primitive::Identifier is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:49: warning: Member MeshGeometry(const MeshGeometry &other) (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:52: warning: Member operator=(MeshGeometry) (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:138: warning: Member vertices() (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:139: warning: Member triangles() (function) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:46: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::MeshGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:41: warning: Member LineStripGeometry(const LineStripGeometry &other) (function) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:44: warning: Member operator=(LineStripGeometry) (function) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:38: warning: Member InvalidIndex (variable) of class Avogadro::Rendering::LineStripGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/scene.h:108: warning: Member rootNode() const (function) of class Avogadro::Rendering::Scene is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:37: warning: Member Shader(Type type=Unknown, const std::string &source="") (function) of class Avogadro::Rendering::Shader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:70: warning: Member m_type (variable) of class Avogadro::Rendering::Shader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:71: warning: Member m_handle (variable) of class Avogadro::Rendering::Shader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:72: warning: Member m_dirty (variable) of class Avogadro::Rendering::Shader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:74: warning: Member m_source (variable) of class Avogadro::Rendering::Shader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shader.h:75: warning: Member m_error (variable) of class Avogadro::Rendering::Shader is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:23: warning: Member vertexShader (variable) of struct Avogadro::Rendering::ShaderInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:24: warning: Member fragmentShader (variable) of struct Avogadro::Rendering::ShaderInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/curvegeometry.h:25: warning: Member program (variable) of struct Avogadro::Rendering::ShaderInfo is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:147: warning: Member setUniformValue(const std::string &name, const Eigen::Matrix4f &matrix) (function) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:156: warning: Member setAttributeArrayInternal(const std::string &name, void *buffer, Avogadro::Type type, int tupleSize, NormalizeOption normalize) (function) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:159: warning: Member m_handle (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:160: warning: Member m_vertexShader (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:161: warning: Member m_fragmentShader (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:163: warning: Member m_linked (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:165: warning: Member m_error (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:167: warning: Member m_attributes (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:169: warning: Member m_textureUnitBindings (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/shaderprogram.h:170: warning: Member m_boundTextureUnits (variable) of class Avogadro::Rendering::ShaderProgram is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:53: warning: Member setAoEnabled(bool enabled) (function) of class Avogadro::Rendering::SolidPipeline is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:59: warning: Member setAoStrength(float strength) (function) of class Avogadro::Rendering::SolidPipeline is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:65: warning: Member setEdEnabled(bool enabled) (function) of class Avogadro::Rendering::SolidPipeline is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/solidpipeline.h:75: warning: Member setEdStrength(float strength) (function) of class Avogadro::Rendering::SolidPipeline is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:95: warning: Member Sphere(const Vector3f &position_, float radius_, Primitive::Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Sphere is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:101: warning: Member position() const (function) of class Avogadro::Rendering::Sphere is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:102: warning: Member setPosition(const Vector3f &pos) (function) of class Avogadro::Rendering::Sphere is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:104: warning: Member radius() const (function) of class Avogadro::Rendering::Sphere is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:105: warning: Member setRadius(float r) (function) of class Avogadro::Rendering::Sphere is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:76: warning: Member Primitive(Identifier id, const Vector3ub &color_) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:81: warning: Member identifier() const (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:82: warning: Member setIdentifier(Identifier id) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:84: warning: Member color() const (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/primitive.h:85: warning: Member setColor(const Vector3ub &c) (function) of class Avogadro::Rendering::Primitive is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:19: warning: Member SphereColor(Vector3f centre, float r, Vector3ub c) (function) of struct Avogadro::Rendering::SphereColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:22: warning: Member center (variable) of struct Avogadro::Rendering::SphereColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:23: warning: Member radius (variable) of struct Avogadro::Rendering::SphereColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:24: warning: Member color (variable) of struct Avogadro::Rendering::SphereColor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:43: warning: Member SphereGeometry(const SphereGeometry &other) (function) of class Avogadro::Rendering::SphereGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:46: warning: Member operator=(SphereGeometry) (function) of class Avogadro::Rendering::SphereGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/spheregeometry.h:101: warning: Member spheres() const (function) of class Avogadro::Rendering::SphereGeometry is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:31: warning: Member TextLabelBase(const TextLabelBase &other) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:34: warning: Member operator=(TextLabelBase other) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:73: warning: Member setAnchorInternal(const Vector3f &anchor) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:74: warning: Member getAnchorInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:77: warning: Member setRadiusInternal(float radius) (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:78: warning: Member getRadiusInternal() const (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:80: warning: Member markDirty() (function) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:67: warning: Member m_text (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:68: warning: Member m_textProperties (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:69: warning: Member m_imageDimensions (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textlabelbase.h:70: warning: Member m_imageRgba (variable) of class Avogadro::Rendering::TextLabelBase is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:60: warning: Member TextProperties(const TextProperties &other) (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:63: warning: Member operator=(TextProperties other) (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:64: warning: Member swap(TextProperties &other) (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:66: warning: Member operator==(const TextProperties &other) const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:67: warning: Member operator!=(const TextProperties &other) const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:76: warning: Member pixelHeight() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:83: warning: Member hAlign() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:90: warning: Member vAlign() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:102: warning: Member rotationDegreesCW() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:109: warning: Member fontFamily() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:116: warning: Member fontStyles() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:123: warning: Member bold() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:130: warning: Member italic() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/textproperties.h:137: warning: Member underline() const (function) of class Avogadro::Rendering::TextProperties is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:113: warning: Member minFilter() const (function) of class Avogadro::Rendering::Texture2D is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:114: warning: Member setMagFilter(FilterOption opt) (function) of class Avogadro::Rendering::Texture2D is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:115: warning: Member magFilter() const (function) of class Avogadro::Rendering::Texture2D is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:157: warning: Member release() const (function) of class Avogadro::Rendering::Texture2D is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/texture2d.h:159: warning: Member error() const (function) of class Avogadro::Rendering::Texture2D is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/transformnode.h:25: warning: Member TransformNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::TransformNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:43: warning: Member GroupNode(GroupNode *parent=nullptr) (function) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:96: warning: Member children() const (function) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:43: warning: Member parent() (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:64: warning: Member cast() const (function) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:28: warning: Member NodeType (enumeration) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:109: warning: Member clear(NodeType type) (function) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:110: warning: Member m_children (variable) of class Avogadro::Rendering::GroupNode is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:75: warning: Member m_parent (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/node.h:76: warning: Member m_visible (variable) of class Avogadro::Rendering::Node is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:47: warning: Member visit(GroupNode &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:48: warning: Member visit(GeometryNode &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:49: warning: Member visit(Drawable &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:50: warning: Member visit(SphereGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:51: warning: Member visit(AmbientOcclusionSphereGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:52: warning: Member visit(CurveGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:53: warning: Member visit(CylinderGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:54: warning: Member visit(MeshGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:55: warning: Member visit(TextLabel2D &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:56: warning: Member visit(TextLabel3D &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/visitor.h:57: warning: Member visit(LineStripGeometry &) (function) of class Avogadro::Rendering::Visitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:40: warning: Member Drawable(const Drawable &other) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:43: warning: Member operator=(Drawable) (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:56: warning: Member parent() (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:90: warning: Member identifier() const (function) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:124: warning: Member m_parent (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:125: warning: Member m_visible (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:126: warning: Member m_renderPass (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/drawable.h:127: warning: Member m_identifier (variable) of class Avogadro::Rendering::Drawable is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:29: warning: Member VRMLVisitor(const Camera &camera) (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:32: warning: Member begin() (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:33: warning: Member end() (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:39: warning: Member visit(GroupNode &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:40: warning: Member visit(GeometryNode &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:41: warning: Member visit(Drawable &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:42: warning: Member visit(SphereGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:43: warning: Member visit(AmbientOcclusionSphereGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:44: warning: Member visit(CurveGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:45: warning: Member visit(CylinderGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:46: warning: Member visit(MeshGeometry &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:47: warning: Member visit(TextLabel2D &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:48: warning: Member visit(TextLabel3D &) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:49: warning: Member visit(LineStripGeometry &geometry) override (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:51: warning: Member setCamera(const Camera &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:52: warning: Member camera() const (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:54: warning: Member setBackgroundColor(const Vector3ub &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:55: warning: Member setAmbientColor(const Vector3ub &c) (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/vrmlvisitor.h:56: warning: Member setAspectRatio(float ratio) (function) of class Avogadro::Rendering::VRMLVisitor is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:19: warning: Member ChartDialog(QWidget *p=nullptr) (function) of class Avogadro::VTK::ChartDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:22: warning: Member chartWidget() (function) of class Avogadro::VTK::ChartDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:24: warning: Member sizeHint() const override (function) of class Avogadro::VTK::ChartDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartdialog.h:25: warning: Member minimumSizeHint() const override (function) of class Avogadro::VTK::ChartDialog is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:32: warning: Member Axis (enumeration) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:29: warning: Member ChartWidget(QWidget *p=nullptr) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:38: warning: Member addPlot(const std::vector< float > &x, const std::vector< float > &y, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:41: warning: Member addPlots(const std::vector< std::vector< float > > &plotData, const color4ub &color=color4ub{ 0, 0, 0, 255 }) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:44: warning: Member clearPlots() (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:46: warning: Member setXAxisTitle(const char *title) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:48: warning: Member setYAxisTitle(const char *title) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:50: warning: Member setTickLabels(Axis a, const std::vector< float > &tickPositions, const std::vector< std::string > &tickLabels) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/chartwidget.h:53: warning: Member setAxisLimits(Axis a, float min, float max) (function) of class Avogadro::VTK::ChartWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h:19: warning: Member QVTKWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::QVTKWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/vtkglwidget.h:43: warning: Member vtkGLWidget(QWidget *p=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::vtkGLWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/qvtkwidget.h:19: warning: Member QVTKWidget(QWidget *parent=nullptr, Qt::WindowFlags f=Qt::WindowFlags()) (function) of class Avogadro::VTK::QVTKWidget is not documented.
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/atom.h:44: warning: explicit link request to 'AtomType' could not be resolved
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/bond.h:20: warning: explicit link request to 'BondType' could not be resolved
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: argument 'array' of command @param is not found in the argument list of ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/chargemodel.h:96: warning: The following parameter of Avogadro::Calc::ChargeModel::potentials(Core::Molecule &mol, const Core::Array< Vector3 > &points) const is not documented:
  parameter 'points'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/client.h:126: warning: Unsupported xml/html tag <rpcMethod> found
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: argument 'custom' of command @param is not found in the argument list of ColorButton::setDialogTitle(const QString title="")
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/colorbutton.h:51: warning: The following parameter of Avogadro::QtGui::ColorButton::setDialogTitle(const QString title="") is not documented:
  parameter 'title'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/coordinateset.h:98: warning: Found unknown command '\index'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:50: warning: The following parameter of Avogadro::Core::CrystalTools::rotateToStandardOrientation(Molecule &molecule, Options opts=None) is not documented:
  parameter 'molecule'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:65: warning: The following parameters of Avogadro::Core::CrystalTools::setVolume(Molecule &molecule, Real newVolume, Options opts=None) are not documented:
  parameter 'molecule'
  parameter 'newVolume'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:75: warning: The following parameter of Avogadro::Core::CrystalTools::niggliReduce(Molecule &molecule, Options opts=None) is not documented:
  parameter 'molecule'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:97: warning: The following parameter of Avogadro::Core::CrystalTools::buildSupercell(Molecule &molecule, unsigned int a, unsigned int b, unsigned int c) is not documented:
  parameter 'molecule'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/crystaltools.h:109: warning: The following parameters of Avogadro::Core::CrystalTools::setCellMatrix(Molecule &molecule, const Matrix3 &newCellColMatrix, Options opt=None) are not documented:
  parameter 'molecule'
  parameter 'newCellColMatrix'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/cube.h:194: warning: The following parameter of Avogadro::Core::Cube::setValue(unsigned int i, float value) is not documented:
  parameter 'value'
 docs for compound Avogadro::Rendering::TextRenderStrategy...
Generating docs for compound Avogadro::Rendering::Texture2D...
Generating docs for compound Avogadro::Rendering::TransformNode...
Generating docs for compound Avogadro::Rendering::Visitor...
Generating docs for compound Avogadro::Rendering::VolumeGeometry...
Generating docs for compound Avogadro::Rendering::VRMLVisitor...
Generating docs for compound Avogadro::VTK::ChartDialog...
Generating docs for compound Avogadro::VTK::ChartWidget...
Generating docs for compound Avogadro::VTK::QVTKWidget...
Generating docs for compound Avogadro::VTK::vtkGLWidget...
Generating graph info page...
Generating directory documentation...
Generating index page...
Generating main page...
Generating page index...
Generating topic index...
Generating module index...
Generating module member index...
Generating namespace index...
Generating namespace member index...
Generating concept index...
Generating annotated compound index...
Generating alphabetical compound index...
Generating hierarchical class index...
Generating member index...
Generating file index...
Generating file member index...
Generating example index...
finalizing index lists...
writing tag file...
Generating XML output...
Generating XML output for class Avogadro::QtOpenGL::ActiveObjects
Generating XML output for class Avogadro::Rendering::AmbientOcclusionSphereGeometry
Generating XML output for class Avogadro::Core::AngleIterator
Generating XML output for class Avogadro::Rendering::ArcSector
Generating XML output for class Avogadro::Rendering::ArcStrip
Generating XML output for class Avogadro::Core::Array
Generating XML output for class Avogadro::Core::internal::ArrayRefContainer
Generating XML output for class Avogadro::Core::ArraySet
Generating XML output for class Avogadro::Rendering::ArrowGeometry
Generating XML output for class Avogadro::Core::Atom
Generating XML output for class Avogadro::Core::AtomTemplate
Generating XML output for class Avogadro::Core::AtomTyper
Generating XML output for class Avogadro::Core::AtomUtilities
Generating XML output for class Avogadro::Core::AvoSpglib
Generating XML output for class Avogadro::QtGui::BackgroundFileFormat
Generating XML output for class Avogadro::Core::BasisSet
Generating XML output for class Avogadro::MoleQueue::BatchJob
Generating XML output for class Avogadro::Rendering::BezierGeometry
Generating XML output for class Avogadro::Core::Bond
Generating XML output for class Avogadro::Core::BondTemplate
Generating XML output for class Avogadro::Rendering::BSplineGeometry
Generating XML output for class Avogadro::Rendering::BufferObject
Generating XML output for class Avogadro::Rendering::Camera
Generating XML output for class Avogadro::Rendering::Cartoon
Generating XML output for class Avogadro::Io::CaseInsensitiveComparator
Generating XML output for class Avogadro::Calc::ChargeManager
Generating XML output for class Avogadro::Calc::ChargeModel
Generating XML output for class Avogadro::VTK::ChartDialog
Generating XML output for class Avogadro::VTK::ChartWidget
Generating XML output for class Avogadro::Io::CjsonFormat
Generating XML output for class Avogadro::MoleQueue::Client
Generating XML output for class Avogadro::Io::CmlFormat
Generating XML output for class Avogadro::Core::Color3f
Generating XML output for class Avogadro::QtGui::ColorButton
Generating XML output for class Avogadro::Rendering::ColorNormalVertex
Generating XML output for class Avogadro::Rendering::ColorTextureVertex
Generating XML output for class Avogadro::QtGui::ContainerWidget
Generating XML output for class Avogadro::Core::CoordinateBlockGenerator
Generating XML output for class Avogadro::Core::CoordinateSet
Generating XML output for class Avogadro::Core::CrystalTools
Generating XML output for class Avogadro::Core::Cube
Generating XML output for class Avogadro::Rendering::CurveGeometry
Generating XML output for class Avogadro::QtGui::CustomElementDialog
Generating XML output for class Avogadro::Rendering::Cylinder
Generating XML output for class Avogadro::Rendering::CylinderColor
Generating XM/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector4ub &color, int dashCount) are not documented:
  parameter 'start'
  parameter 'end'
  parameter 'dashCount'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, const Vector3ub &color, int dashCount) are not documented:
  parameter 'start'
  parameter 'end'
  parameter 'dashCount'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'vertices' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'color' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: argument 'lineWidth' of command @param is not found in the argument list of DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/dashedlinegeometry.h:61: warning: The following parameters of Avogadro::Rendering::DashedLineGeometry::addDashedLine(const Vector3f &start, const Vector3f &end, int dashCount) are not documented:
  parameter 'start'
  parameter 'end'
  parameter 'dashCount'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/fileformatdialog.h:144: warning: The following parameter of Avogadro::QtGui::FileFormatDialog::selectFileFormat(QWidget *parentWidget, const std::vector< const Io::FileFormat * > &ffs, const QString &caption, const QString &prompt, const QString &settingsKey=QString(), const QString &formatPrefix=QString()) is not documented:
  parameter 'formatPrefix'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:319: warning: argument 'fmap' of command @param is not found in the argument list of FileFormatManager::filteredFormatFromFormatVector(FileFormat::Operations filter, const FormatIdVector &fvec) const
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/fileformatmanager.h:319: warning: The following parameter of Avogadro::Io::FileFormatManager::filteredFormatFromFormatVector(FileFormat::Operations filter, const FormatIdVector &fvec) const is not documented:
  parameter 'fvec'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/groupnode.h:54: warning: The following parameter of Avogadro::Rendering::GroupNode::addChild(Node *node, NodeType ui=NodeType::GEOMETRY) is not documented:
  parameter 'ui'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:233: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:244: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:257: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/hdf5dataformat.h:299: warning: Found unknown command '@data'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/hydrogentools.h:77: warning: The following parameters of Avogadro::QtGui::HydrogenTools::generateNewHydrogenPositions(const RWAtom &atom, int numberOfHydrogens, std::vector< Vector3 > &positions) are not documented:
  parameter 'atom'
  parameter 'numberOfHydrogens'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/inputgenerator.h:454: warning: The following parameter of Avogadro::MoleQueue::InputGenerator::InputGenerator(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/interfacescript.h:452: warning: The following parameter of Avogadro::QtGui::InterfaceScript::InterfaceScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/linestripgeometry.h:64: warning: argument 'color' of command @param is not found in the argument list of LineStripGeometry::addLineStrip(const Core::Array< Vector3f > &vertices, float lineWidth)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:52: warning: The following parameters of Avogadro::QtGui::MeshGenerator::MeshGenerator(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false, QObject *parent=nullptr) are not documented:
  parameter 'reverse'
  parameter 'parent'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:68: warning: The following parameter of Avogadro::QtGui::MeshGenerator::initialize(const Core::Cube *cube, Core::Mesh *mesh, float iso, int passes=6, bool reverse=false) is not documented:
  parameter 'reverse'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/meshgenerator.h:125: warning: The following parameter of Avogadro::QtGui::MeshGenerator::offset(float val1, float val2) is not documented:
  parameter 'val2'
L output for class Avogadro::Rendering::CylinderGeometry
Generating XML output for class Avogadro::Rendering::DashedLineGeometry
Generating XML output for class Avogadro::Io::DcdFormat
Generating XML output for class Avogadro::Calc::DefaultModel
Generating XML output for class Avogadro::Core::DihedralIterator
Generating XML output for class Avogadro::Rendering::Drawable
Generating XML output for class Avogadro::Rendering::EigenData
Generating XML output for class Avogadro::QtGui::ElementDetail
Generating XML output for class Avogadro::QtGui::ElementItem
Generating XML output for class Avogadro::Core::Elements
Generating XML output for class Avogadro::QtGui::ElementTranslator
Generating XML output for class Avogadro::Calc::EnergyCalculator
Generating XML output for class Avogadro::Calc::EnergyManager
Generating XML output for class Avogadro::QtGui::ExtensionPlugin
Generating XML output for class Avogadro::QtGui::ExtensionPluginFactory
Generating XML output for class Avogadro::QtGui::FileBrowseWidget
Generating XML output for class Avogadro::Io::FileFormat
Generating XML output for class Avogadro::QtGui::FileFormatDialog
Generating XML output for class Avogadro::Io::FileFormatManager
Generating XML output for class Avogadro::Frustrum
Generating XML output for class Avogadro::QuantumIO::GamessukOut
Generating XML output for class Avogadro::QuantumIO::GAMESSUSOutput
Generating XML output for class Avogadro::QuantumIO::GaussianCube
Generating XML output for class Avogadro::QuantumIO::GaussianFchk
Generating XML output for class Avogadro::Core::GaussianSet
Generating XML output for class Avogadro::Core::GaussianSetTools
Generating XML output for class Avogadro::QtGui::GenericHighlighter
Generating XML output for class Avogadro::QuantumIO::GenericOutput
Generating XML output for class Avogadro::Rendering::GeometryNode
Generating XML output for class Avogadro::Rendering::GeometryVisitor
Generating XML output for class Avogadro::Rendering::GLRenderer
Generating XML output for class Avogadro::Rendering::GLRenderVisitor
Generating XML output for class Avogadro::QtOpenGL::GLWidget
Generating XML output for class Avogadro::Core::Graph
Generating XML output for class Avogadro::Io::GromacsFormat
Generating XML output for class Avogadro::Rendering::GroupNode
Generating XML output for class Avogadro::QuantumIO::GUKBasisSet
Generating XML output for class Avogadro::Core::hBondRecord
Generating XML output for class Avogadro::Io::Hdf5DataFormat
Generating XML output for class Avogadro::Core::ArraySet::Holder
Generating XML output for class Avogadro::QtGui::HydrogenTools
Generating XML output for class Avogadro::Rendering::Identifier
Generating XML output for class Avogadro::Rendering::Primitive::Identifier
Generating XML output for class Avogadro::MoleQueue::InputGenerator
Generating XML output for class Avogadro::MoleQueue::InputGeneratorDialog
Generating XML output for class Avogadro::MoleQueue::InputGeneratorWidget
Generating XML output for class Avogadro::QtGui::InterfaceScript
Generating XML output for class Avogadro::QtGui::InterfaceWidget
Generating XML output for class Avogadro::MoleQueue::JobObject
Generating XML output for class Avogadro::MoleQueue::JsonRpcClient
Generating XML output for class Avogadro::QtGui::JsonWidget
Generating XML output for class Avogadro::Io::LammpsDataFormat
Generating XML output for class Avogadro::Io::LammpsTrajectoryFormat
Generating XML output for class Avogadro::Core::Layer
Generating XML output for class Avogadro::Core::LayerData
Generating XML output for class Avogadro::Core::LayerManager
Generating XML output for class Avogadro::QtGui::LayerModel
Generating XML output for class Avogadro::Calc::LennardJones
Generating XML output for class Avogadro::Rendering::Line
Generating XML output for class Avogadro::Rendering::LineStripGeometry
Generating XML output for class Avogadro::Io::CaseInsensitiveComparator::lowerCaseCompare
Generating XML output for class Avogadro::Io::MdlFormat
Generating XML output for class Avogadro::Core::Mesh
Generating XML output for class Avogadro::QtGui::MeshGenerator
Generat/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/meshgeometry.h:67: warning: argument 'colors' of command @param is not found in the argument list of MeshGeometry::addVertices(const Core::Array< Vector3f > &vertices, const Core::Array< Vector3f > &normals)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'a' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: argument 'b' of command @param is not found in the argument list of Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/molecule.h:171: warning: The following parameters of Avogadro::QtGui::Molecule::addBond(Index atomId1, Index atomId2, unsigned char bondOrder, Index uniqueId) are not documented:
  parameter 'atomId1'
  parameter 'atomId2'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(const QString &scriptFilePath_, QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: argument 'scriptFilePath_' of command @param is not found in the argument list of PythonScript::PythonScript(QObject *parent_=nullptr)
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/pythonscript.h:31: warning: The following parameter of Avogadro::QtGui::PythonScript::PythonScript(QObject *parent_=nullptr) is not documented:
  parameter 'parent_'
/builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/rwmolecule.h:628: warning: The following parameter of Avogadro::QtGui::RWMolecule::setForceVector(Index atomId, const Vector3 &pos, const QString &undoText=QStringLiteral("Change Force Vectors")) is not documented:
  parameter 'atomId'
ing XML output for class Avogadro::Rendering::MeshGeometry
Generating XML output for class Avogadro::Io::MMTFFormat
Generating XML output for class Avogadro::QuantumIO::MoldenFile
Generating XML output for class Avogadro::Core::Molecule
Generating XML output for class Avogadro::QtGui::Molecule
Generating XML output for class Avogadro::Core::MoleculeInfo
Generating XML output for class Avogadro::QtGui::MoleculeModel
Generating XML output for class Avogadro::QtGui::MoleculeSystem
Generating XML output for class Avogadro::MoleQueue::MoleQueueDialog
Generating XML output for class Avogadro::MoleQueue::MoleQueueManager
Generating XML output for class Avogadro::MoleQueue::MoleQueueQueueListModel
Generating XML output for class Avogadro::MoleQueue::MoleQueueWidget
Generating XML output for class Avogadro::QuantumIO::MopacAux
Generating XML output for class Avogadro::QtGui::MultiViewWidget
Generating XML output for class Avogadro::Core::Mutex
Generating XML output for class Avogadro::Core::NameAtomTyper
Generating XML output for class Avogadro::Core::NeighborPerceiver
Generating XML output for class Avogadro::Rendering::Node
Generating XML output for class Avogadro::Rendering::GroupNode::NodeInfo
Generating XML output for class Avogadro::QuantumIO::NWChemJson
Generating XML output for class Avogadro::QuantumIO::NWChemLog
Generating XML output for class Avogadro::QuantumIO::ORCAOutput
Generating XML output for class Avogadro::Io::OutcarFormat
Generating XML output for class Avogadro::Rendering::DashedLineGeometry::PackedVertex
Generating XML output for class Avogadro::Rendering::LineStripGeometry::PackedVertex
Generating XML output for class Avogadro::Rendering::MeshGeometry::PackedVertex
Generating XML output for class Avogadro::Io::PdbFormat
Generating XML output for class Avogadro::QtGui::PeriodicTableScene
Generating XML output for class Avogadro::QtGui::PeriodicTableView
Generating XML output for class Avogadro::QtGui::PersistentAtom
Generating XML output for class Avogadro::QtGui::PersistentBond
Generating XML output for class Avogadro::Core::ArraySet::PlaceHolder
Generating XML output for class Avogadro::QtGui::PluginLayerManager
Generating XML output for class Avogadro::Rendering::PLYVisitor
Generating XML output for class Avogadro::Rendering::Point
Generating XML output for class Avogadro::Io::PoscarFormat
Generating XML output for class Avogadro::Rendering::POVRayVisitor
Generating XML output for class Avogadro::Rendering::Primitive
Generating XML output for class Avogadro::QtGui::PythonScript
Generating XML output for class Avogadro::QtOpenGL::QtTextRenderStrategy
Generating XML output for class Avogadro::Rendering::Quad
Generating XML output for class Avogadro::Rendering::QuadOutline
Generating XML output for class Avogadro::VTK::QVTKWidget
Generating XML output for class Avogadro::MoleQueue::BatchJob::Request
Generating XML output for class Avogadro::Core::Residue
Generating XML output for class Avogadro::Core::ResidueData
Generating XML output for class Avogadro::Core::RingPerceiver
Generating XML output for class Avogadro::QtGui::GenericHighlighter::Rule
Generating XML output for class Avogadro::QtGui::RWAtom
Generating XML output for class Avogadro::QtGui::RWBond
Generating XML output for class Avogadro::QtGui::RWLayerManager
Generating XML output for class Avogadro::QtGui::RWMolecule
Generating XML output for class Avogadro::Rendering::Scene
Generating XML output for class Avogadro::QtGui::ScenePlugin
Generating XML output for class Avogadro::QtGui::ScenePluginFactory
Generating XML output for class Avogadro::QtGui::ScenePluginModel
Generating XML output for class Avogadro::QtGui::ScriptLoader
Generating XML output for class Avogadro::Core::SecondaryStructureAssigner
Generating XML output for class Avogadro::Rendering::Shader
Generating XML output for class Avogadro::Rendering::ShaderInfo
Generating XML output for class Avogadro::Rendering::ShaderProgram
Generating XML output for class Avogadro::Core::SharedMutex
Generating XML output for class Avogadro::Core::SlaterSet
Generating XML output for class Avogadro::Core::SlaterSetTools
Generating XML output for class Avogadro::Rendering::SolidPipeline
Generating XML output for class Avogadro::Core::SpaceGroups
Generating XML output for class Avogadro::Rendering::Sphere
Generating XML output for class Avogadro::Rendering::SphereColor
Generating XML output for class Avogadro::Rendering::SphereGeometry
Generating XML output for class Avogadro::Core::SymbolAtomTyper
Generating XML output for class Avogadro::Rendering::TextLabel2D
Generating XML output for class Avogadro::Rendering::TextLabel3D
Generating XML output for class Avogadro::Rendering::TextLabelBase
Generating XML output for class Avogadro::Rendering::TextProperties
Generating XML output for class Avogadro::Rendering::TextRenderStrategy
Generating XML output for class Avogadro::Rendering::Texture2D
Generating XML output for class Avogadro::QtGui::ToolPlugin
Generating XML output for class Avogadro::QtGui::ToolPluginFactory
Generating XML output for class Avogadro::Rendering::TransformNode
Generating XML output for class Avogadro::Io::TrrFormat
Generating XML output for class Avogadro::Io::TurbomoleFormat
Generating XML output for class Avogadro::TypeTraits
Generating XML output for class Avogadro::TypeTraits< char >
Generating XML output for class Avogadro::TypeTraits< double >
Generating XML output for class Avogadro::TypeTraits< float >
Generating XML output for class Avogadro::TypeTraits< int >
Generating XML output for class Avogadro::TypeTraits< short >
Generating XML output for class Avogadro::TypeTraits< unsigned char >
Generating XML output for class Avogadro::TypeTraits< unsigned int >
Generating XML output for class Avogadro::TypeTraits< unsigned short >
Generating XML output for class Avogadro::QtGui::RWMolecule::UndoCommand
Generating XML output for class Avogadro::Core::UnitCell
Generating XML output for class Avogadro::Core::Variant
Generating XML output for class Avogadro::Core::VariantMap
Generating XML output for class Avogadro::QtGui::ViewFactory
Generating XML output for class Avogadro::Rendering::Visitor
Generating XML output for class Avogadro::Rendering::VolumeGeometry
Generating XML output for class Avogadro::Rendering::VRMLVisitor
Generating XML output for class vtkAvogadroActor
Generating XML output for class Avogadro::VTK::vtkGLWidget
Generating XML output for class Avogadro::Io::XyzFormat
Generating XML output for namespace Avogadro
Generating XML output for namespace Avogadro::Calc
Generating XML output for namespace Avogadro::Core
Generating XML output for namespace Avogadro::Core::internal
Generating XML output for namespace Avogadro::Io
Generating XML output for namespace Avogadro::MoleQueue
Generating XML output for namespace Avogadro::MoleQueue::Ui
Generating XML output for namespace Avogadro::QtGui
Generating XML output for namespace Avogadro::QtGui::@110
Generating XML output for namespace Avogadro::QtGui::Ui
Generating XML output for namespace Avogadro::QtGui::Utilities
Generating XML output for namespace Avogadro::QtOpenGL
Generating XML output for namespace Avogadro::QtPlugins
Generating XML output for namespace Avogadro::QuantumIO
Generating XML output for namespace Avogadro::Rendering
Generating XML output for namespace Avogadro::VTK
Generating XML output for namespace cppoptlib
Generating XML output for namespace QtPlugins
Generating XML output for namespace std
Generating XML output for file chargemanager.h
Generating XML output for file chargemodel.h
Generating XML output for file defaultmodel.h
Generating XML output for file energycalculator.h
Generating XML output for file energymanager.h
Generating XML output for file lennardjones.h
Generating XML output for file lennardjonesdata.h
Generating XML output for file angleiterator.h
Generating XML output for file angletools.h
Generating XML output for file array.h
Generating XML output for file atom.h
Generating XML output for file atomtyper-inline.h
Generating XML output for file atomtyper.h
Generating XML output for file atomutilities.h
Generating XML output for file avogadrocore.h
Generating XML output for file avospglib.h
Generating XML output for file basisset.h
Generating XML output for file bond.h
Generating XML output for file color3f.h
Generating XML output for file coordinateblockgenerator.h
Generating XML output for file coordinateset.h
Generating XML output for file crystaltools.h
Generating XML output for file cube.h
Generating XML output for file dihedraliterator.h
Generating XML output for file elementdata.h
Generating XML output for file elements.h
Generating XML output for file gaussianset.h
Generating XML output for file gaussiansettools.h
Generating XML output for file graph.h
Generating XML output for file layer.h
Generating XML output for file layermanager.h
Generating XML output for file matrix.h
Generating XML output for file mdlvalence_p.h
Generating XML output for file mesh.h
Generating XML output for file mutex.h
Generating XML output for file nameatomtyper.h
Generating XML output for file neighborperceiver.h
Generating XML output for file residue.h
Generating XML output for file residuecolors.h
Generating XML output for file residuedata.h
Generating XML output for file ringperceiver.h
Generating XML output for file secondarystructure.h
Generating XML output for file sharedmutex.h
Generating XML output for file slaterset.h
Generating XML output for file slatersettools.h
Generating XML output for file spacegroupdata.h
Generating XML output for file spacegroups.h
Generating XML output for file symbolatomtyper.h
Generating XML output for file types.h
Generating XML output for file unitcell.h
Generating XML output for file variant-inline.h
Generating XML output for file variant.h
Generating XML output for file variantmap.h
Generating XML output for file vector.h
Generating XML output for file cjsonformat.h
Generating XML output for file cmlformat.h
Generating XML output for file dcdformat.h
Generating XML output for file fileformat.h
Generating XML output for file fileformatmanager.h
Generating XML output for file gromacsformat.h
Generating XML output for file hdf5dataformat.h
Generating XML output for file lammpsformat.h
Generating XML output for file mdlformat.h
Generating XML output for file mmtfformat.h
Generating XML output for file pdbformat.h
Generating XML output for file trrformat.h
Generating XML output for file turbomoleformat.h
Generating XML output for file vaspformat.h
Generating XML output for file xyzformat.h
Generating XML output for file batchjob.h
Generating XML output for file client.h
Generating XML output for file jobobject.h
Generating XML output for file jsonrpcclient.h
Generating XML output for file inputgenerator.h
Generating XML output for file inputgeneratordialog.h
Generating XML output for file inputgeneratorwidget.h
Generating XML output for file molequeuedialog.h
Generating XML output for file molequeuemanager.h
Generating XML output for file molequeuequeuelistmodel.h
Generating XML output for file molequeuewidget.h
Generating XML output for file backgroundfileformat.h
Generating XML output for file colorbutton.h
Generating XML output for file containerwidget.h
Generating XML output for file customelementdialog.h
Generating XML output for file elementdetail_p.h
Generating XML output for file elementitem_p.h
Generating XML output for file elementtranslator.h
Generating XML output for file extensionplugin.h
Generating XML output for file filebrowsewidget.h
Generating XML output for file fileformatdialog.h
Generating XML output for file generichighlighter.h
Generating XML output for file hydrogentools.h
Generating XML output for file interfacescript.h
Generating XML output for file interfacewidget.h
Generating XML output for file jsonwidget.h
Generating XML output for file layermodel.h
Generating XML output for file meshgenerator.h
Generating XML output for file core/molecule.h
Generating XML output for file qtgui/molecule.h
Generating XML output for file moleculemodel.h
Generating XML output for file multiviewwidget.h
Generating XML output for file periodictablescene_p.h
Generating XML output for file periodictableview.h
Generating XML output for file persistentatom.h
Generating XML output for file persistentbond.h
Generating XML output for file pluginlayermanager.h
Generating XML output for file pythonscript.h
Generating XML output for file rwlayermanager.h
Generating XML output for file rwmolecule.h
Generating XML output for file rwmolecule_undo.h
Generating XML output for file sceneplugin.h
Generating XML output for file scenepluginmodel.h
Generating XML output for file scriptloader.h
Generating XML output for file toolplugin.h
Generating XML output for file core/utilities.h
Generating XML output for file qtgui/utilities.h
Generating XML output for file viewfactory.h
Generating XML output for file activeobjects.h
Generating XML output for file glwidget.h
Generating XML output for file qttextrenderstrategy.h
Generating XML output for file gamessukout.h
Generating XML output for file gamessus.h
Generating XML output for file gaussiancube.h
Generating XML output for file gaussianfchk.h
Generating XML output for file genericoutput.h
Generating XML output for file molden.h
Generating XML output for file mopacaux.h
Generating XML output for file nwchemjson.h
Generating XML output for file nwchemlog.h
Generating XML output for file orca.h
Generating XML output for file ambientocclusionspheregeometry.h
Generating XML output for file arcsector.h
Generating XML output for file arcstrip.h
Generating XML output for file arrowgeometry.h
Generating XML output for file avogadrogl.h
Generating XML output for file avogadrorendering.h
Generating XML output for file beziergeometry.h
Generating XML output for file bsplinegeometry.h
Generating XML output for file bufferobject.h
Generating XML output for file camera.h
Generating XML output for file cartoongeometry.h
Generating XML output for file curvegeometry.h
Generating XML output for file cylindergeometry.h
Generating XML output for file dashedlinegeometry.h
Generating XML output for file drawable.h
Generating XML output for file geometrynode.h
Generating XML output for file geometryvisitor.h
Generating XML output for file glrenderer.h
Generating XML output for file glrendervisitor.h
Generating XML output for file groupnode.h
Generating XML output for file linestripgeometry.h
Generating XML output for file meshgeometry.h
Generating XML output for file node.h
Generating XML output for file plyvisitor.h
Generating XML output for file povrayvisitor.h
Generating XML output for file primitive.h
Generating XML output for file quad.h
Generating XML output for file quadoutline.h
Generating XML output for file scene.h
Generating XML output for file shader.h
Generating XML output for file shaderprogram.h
Generating XML output for file solidpipeline.h
Generating XML output for file spheregeometry.h
Generating XML output for file textlabel2d.h
Generating XML output for file textlabel3d.h
Generating XML output for file textlabelbase.h
Generating XML output for file textproperties.h
Generating XML output for file textrenderstrategy.h
Generating XML output for file texture2d.h
Generating XML output for file transformnode.h
Generating XML output for file visitor.h
Generating XML output for file volumegeometry.h
Generating XML output for file vrmlvisitor.h
Generating XML output for file chartdialog.h
Generating XML output for file chartwidget.h
Generating XML output for file qvtkwidget.h
Generating XML output for file vtkAvogadroActor.h
Generating XML output for file vtkglwidget.h
Generating XML output for file mainpage.dox
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/client/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/docs/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering/
Generate XML output for dir /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/vtk/
Generating XML output for the main page
Running plantuml with JAVA...
type lookup cache used 9275/65536 hits=39950 misses=10973
symbol lookup cache used 8448/65536 hits=70232 misses=8448
finished...
~/build/BUILD/avogadrolibs-1.98.1
+ popd
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.2JRSIm
+ umask 022
+ cd /builddir/build/BUILD
+ '[' /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64 '!=' / ']'
+ rm -rf /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64
++ dirname /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64
+ mkdir -p /builddir/build/BUILDROOT
+ mkdir /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64
+ CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CFLAGS
+ CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer '
+ export CXXFLAGS
+ FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FFLAGS
+ FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -m64   -mtune=generic -fasynchronous-unwind-tables -fstack-clash-protection -fcf-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules '
+ export FCFLAGS
+ VALAFLAGS=-g
+ export VALAFLAGS
+ RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn'
+ export RUSTFLAGS
+ LDFLAGS='-Wl,-z,relro -Wl,--as-needed  -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1  -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes '
+ export LDFLAGS
+ LT_SYS_LIBRARY_PATH=/usr/lib64:
+ export LT_SYS_LIBRARY_PATH
+ CC=gcc
+ export CC
+ CXX=g++
+ export CXX
+ cd avogadrolibs-1.98.1
+ /usr/bin/make install DESTDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64 'INSTALL=/usr/bin/install -p' -C build
make: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/cmake -S/builddir/build/BUILD/avogadrolibs-1.98.1 -B/builddir/build/BUILD/avogadrolibs-1.98.1/build --check-build-system CMakeFiles/Makefile.cmake 0
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles /builddir/build/BUILD/avogadrolibs-1.98.1/build//CMakeFiles/progress.marks
/usr/bin/make  -f CMakeFiles/Makefile2 all
make[1]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/CMakeFiles/pugixml.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f thirdparty/CMakeFiles/pugixml.dir/build.make thirdparty/CMakeFiles/pugixml.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'thirdparty/CMakeFiles/pugixml.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[  0%] Built target pugixml
/usr/bin/make  -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/CMakeFiles/struct.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f thirdparty/CMakeFiles/struct.dir/build.make thirdparty/CMakeFiles/struct.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'thirdparty/CMakeFiles/struct.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[  1%] Built target struct
/usr/bin/make  -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi /builddir/build/BUILD/avogadrolibs-1.98.1/build/thirdparty/libgwavi/CMakeFiles/gwavi.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f thirdparty/libgwavi/CMakeFiles/gwavi.dir/build.make thirdparty/libgwavi/CMakeFiles/gwavi.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'thirdparty/libgwavi/CMakeFiles/gwavi.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[  2%] Built target gwavi
/usr/bin/make  -f avogadro/core/CMakeFiles/Headers.dir/build.make avogadro/core/CMakeFiles/Headers.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core/CMakeFiles/Headers.dir/DependInfo.cmake "--color="
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[  2%] Built target Headers
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/bodr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/bodr/CMakeFiles/bodrparse.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/encodefile /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/encodefile/CMakeFiles/encodefile.dir/DependInfo.cmake "--color="
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/usr/bin/make  -f utilities/resdata/CMakeFiles/resdataparse.dir/build.make utilities/resdata/CMakeFiles/resdataparse.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/utilities/resdata /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata /builddir/build/BUILD/avogadrolibs-1.98.1/build/utilities/resdata/CMakeFiles/resdataparse.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/core/CMakeFiles/Core.dir/DependInfo.cmake "--color="
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[  7%] Built target Core
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/calc /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/calc/CMakeFiles/Calc.dir/DependInfo.cmake "--color="
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[  9%] Built target Calc
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/io /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/io/CMakeFiles/IO.dir/DependInfo.cmake "--color="
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[ 12%] Built target IO
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/quantumio /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/quantumio/CMakeFiles/QuantumIO.dir/DependInfo.cmake "--color="
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[ 14%] Built target QuantumIO
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/avocjsontocml.dir/DependInfo.cmake "--color="
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/avobabel.dir/DependInfo.cmake "--color="
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[ 15%] Built target avobabel
/usr/bin/make  -f avogadro/command/CMakeFiles/qube.dir/build.make avogadro/command/CMakeFiles/qube.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/command/CMakeFiles/qube.dir/DependInfo.cmake "--color="
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[ 16%] Built target qube
/usr/bin/make  -f avogadro/rendering/CMakeFiles/Rendering.dir/build.make avogadro/rendering/CMakeFiles/Rendering.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/rendering /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/rendering/CMakeFiles/Rendering.dir/DependInfo.cmake "--color="
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[ 27%] Built target Rendering
/usr/bin/make  -f avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/build.make avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/DependInfo.cmake "--color="
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[ 27%] Automatic MOC for target QtGui
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui_autogen.dir/AutogenInfo.json Release
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[ 27%] Built target QtGui_autogen
/usr/bin/make  -f avogadro/qtgui/CMakeFiles/QtGui.dir/build.make avogadro/qtgui/CMakeFiles/QtGui.dir/depend
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cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtgui/CMakeFiles/QtGui.dir/DependInfo.cmake "--color="
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[ 33%] Built target QtGui
/usr/bin/make  -f avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/DependInfo.cmake "--color="
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[ 33%] Automatic MOC for target QtOpenGL
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL_autogen.dir/AutogenInfo.json Release
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[ 33%] Built target QtOpenGL_autogen
/usr/bin/make  -f avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/build.make avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtopengl/CMakeFiles/QtOpenGL.dir/DependInfo.cmake "--color="
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[ 34%] Built target QtOpenGL
/usr/bin/make  -f avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/DependInfo.cmake "--color="
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[ 34%] Automatic MOC for target MoleQueue
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 34%] Built target MoleQueue_autogen
/usr/bin/make  -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/molequeue/CMakeFiles/MoleQueue.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/molequeue/CMakeFiles/MoleQueue.dir/build.make avogadro/molequeue/CMakeFiles/MoleQueue.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/molequeue/CMakeFiles/MoleQueue.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target MoleQueue
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Automatic MOC for target QTAIMScenePlugin
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target QTAIMScenePlugin_autogen
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/qtaim/CMakeFiles/QTAIMScenePlugin.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target QTAIMScenePlugin
/usr/bin/make  -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Automatic MOC for target ThreeDMol
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 37%] Built target ThreeDMol_autogen
/usr/bin/make  -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build.make avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/3dmol/CMakeFiles/ThreeDMol.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 38%] Built target ThreeDMol
/usr/bin/make  -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 39%] Automatic MOC for target ApplyColors
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 39%] Built target ApplyColors_autogen
/usr/bin/make  -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build.make avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/applycolors/CMakeFiles/ApplyColors.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 39%] Built target ApplyColors
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 40%] Automatic MOC for target AlignTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 40%] Built target AlignTool_autogen
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build.make avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/aligntool/CMakeFiles/AlignTool.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 40%] Built target AlignTool
/usr/bin/make  -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 41%] Automatic MOC for target BondCentric
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 41%] Built target BondCentric_autogen
/usr/bin/make  -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build.make avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/bondcentrictool/CMakeFiles/BondCentric.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Built target BondCentric
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Automatic MOC for target Bonding
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Built target Bonding_autogen
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build.make avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/bonding/CMakeFiles/Bonding.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Built target Bonding
/usr/bin/make  -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Automatic MOC for target Cartoons
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Built target Cartoons_autogen
/usr/bin/make  -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build.make avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/cartoons/CMakeFiles/Cartoons.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Built target Cartoons
/usr/bin/make  -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Automatic MOC for target Centroid
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 42%] Built target Centroid_autogen
/usr/bin/make  -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build.make avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/centroid/CMakeFiles/Centroid.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 43%] Built target Centroid
/usr/bin/make  -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 43%] Automatic MOC for target CopyPaste
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 43%] Built target CopyPaste_autogen
/usr/bin/make  -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build.make avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/copypaste/CMakeFiles/CopyPaste.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 44%] Built target CopyPaste
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 44%] Automatic MOC for target Crystal
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 44%] Built target Crystal_autogen
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/crystal/CMakeFiles/Crystal.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Built target Crystal
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Automatic MOC for target CrystalScene
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 46%] Built target CrystalScene_autogen
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build.make avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/crystal/CMakeFiles/CrystalScene.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 47%] Built target CrystalScene
/usr/bin/make  -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 47%] Automatic MOC for target CustomElements
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 47%] Built target CustomElements_autogen
/usr/bin/make  -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build.make avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/customelements/CMakeFiles/CustomElements.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 48%] Built target CustomElements
/usr/bin/make  -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 48%] Automatic MOC for target Editor
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 48%] Built target Editor_autogen
/usr/bin/make  -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/editor/CMakeFiles/Editor.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build.make avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/editor/CMakeFiles/Editor.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 49%] Built target Editor
/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 49%] Automatic MOC for target FetchPDB
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 49%] Built target FetchPDB_autogen
/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build.make avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/fetchpdb/CMakeFiles/FetchPDB.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 50%] Built target FetchPDB
/usr/bin/make  -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 50%] Automatic MOC for target Focus
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 50%] Built target Focus_autogen
/usr/bin/make  -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/focus/CMakeFiles/Focus.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build.make avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/focus/CMakeFiles/Focus.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 51%] Built target Focus
/usr/bin/make  -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 51%] Automatic MOC for target Forcefield
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 51%] Built target Forcefield_autogen
/usr/bin/make  -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build.make avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/forcefield/CMakeFiles/Forcefield.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 52%] Built target Forcefield
/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 52%] Automatic MOC for target Hydrogens
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 52%] Built target Hydrogens_autogen
/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build.make avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/hydrogens/CMakeFiles/Hydrogens.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 53%] Built target Hydrogens
/usr/bin/make  -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 53%] Automatic MOC for target ImportPQR
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 53%] Built target ImportPQR_autogen
/usr/bin/make  -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build.make avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/importpqr/CMakeFiles/ImportPQR.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 54%] Built target ImportPQR
/usr/bin/make  -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 54%] Automatic MOC for target NucleicInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 54%] Built target NucleicInput_autogen
/usr/bin/make  -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build.make avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/insertdna/CMakeFiles/NucleicInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 55%] Built target NucleicInput
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 55%] Automatic MOC for target Label
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 55%] Built target Label_autogen
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/Label.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/Label.dir/build.make avogadro/qtplugins/label/CMakeFiles/Label.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/label/CMakeFiles/Label.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 56%] Built target Label
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 56%] Automatic MOC for target LabelEditor
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 56%] Built target LabelEditor_autogen
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build.make avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/label/CMakeFiles/LabelEditor.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 57%] Built target LabelEditor
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 57%] Automatic MOC for target LineFormatInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 57%] Built target LineFormatInput_autogen
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build.make avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/lineformatinput/CMakeFiles/LineFormatInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Built target LineFormatInput
/usr/bin/make  -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Automatic MOC for target Manipulator
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 58%] Built target Manipulator_autogen
/usr/bin/make  -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build.make avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/manipulator/CMakeFiles/Manipulator.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 59%] Built target Manipulator
/usr/bin/make  -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 60%] Automatic MOC for target MeasureTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 60%] Built target MeasureTool_autogen
/usr/bin/make  -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build.make avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/measuretool/CMakeFiles/MeasureTool.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 61%] Built target MeasureTool
/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 61%] Automatic MOC for target Navigator
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 61%] Built target Navigator_autogen
/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build.make avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/navigator/CMakeFiles/Navigator.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 62%] Built target Navigator
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 62%] Automatic MOC for target NetworkDatabases
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 62%] Built target NetworkDatabases_autogen
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build.make avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/networkdatabases/CMakeFiles/NetworkDatabases.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 63%] Built target NetworkDatabases
/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Automatic MOC for target OpenBabel
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 64%] Built target OpenBabel_autogen
/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build.make avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/openbabel/CMakeFiles/OpenBabel.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Built target OpenBabel
/usr/bin/make  -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Automatic MOC for target PlayerTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 65%] Built target PlayerTool_autogen
/usr/bin/make  -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build.make avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/playertool/CMakeFiles/PlayerTool.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Built target PlayerTool
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Automatic MOC for target PLY
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Built target PLY_autogen
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ply/CMakeFiles/PLY.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build.make avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/ply/CMakeFiles/PLY.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Built target PLY
/usr/bin/make  -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Automatic MOC for target POVRay
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 66%] Built target POVRay_autogen
/usr/bin/make  -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build.make avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/povray/CMakeFiles/POVRay.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 67%] Built target POVRay
/usr/bin/make  -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Automatic MOC for target PropertyTables
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Built target PropertyTables_autogen
/usr/bin/make  -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build.make avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/propertytables/CMakeFiles/PropertyTables.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Built target PropertyTables
/usr/bin/make  -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Automatic MOC for target ResetView
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Built target ResetView_autogen
/usr/bin/make  -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build.make avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/resetview/CMakeFiles/ResetView.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Built target ResetView
/usr/bin/make  -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Automatic MOC for target Select
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 68%] Built target Select_autogen
/usr/bin/make  -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/select/CMakeFiles/Select.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/select/CMakeFiles/Select.dir/build.make avogadro/qtplugins/select/CMakeFiles/Select.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/select/CMakeFiles/Select.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 69%] Built target Select
/usr/bin/make  -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 69%] Automatic MOC for target Selection
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 69%] Built target Selection_autogen
/usr/bin/make  -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build.make avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/selectiontool/CMakeFiles/Selection.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 70%] Built target Selection
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 70%] Automatic MOC for target SpaceGroup
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 70%] Built target SpaceGroup_autogen
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build.make avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/spacegroup/CMakeFiles/SpaceGroup.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 71%] Built target SpaceGroup
/usr/bin/make  -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 71%] Automatic MOC for target Surfaces
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 71%] Built target Surfaces_autogen
/usr/bin/make  -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build.make avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/surfaces/CMakeFiles/Surfaces.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 73%] Built target Surfaces
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 73%] Automatic MOC for target LammpsInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 73%] Built target LammpsInput_autogen
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build.make avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/lammpsinput/CMakeFiles/LammpsInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 74%] Built target LammpsInput
/usr/bin/make  -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 74%] Automatic MOC for target OpenMMInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 74%] Built target OpenMMInput_autogen
/usr/bin/make  -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build.make avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/openmminput/CMakeFiles/OpenMMInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 75%] Built target OpenMMInput
/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 75%] Automatic MOC for target CoordinateEditor
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 75%] Built target CoordinateEditor_autogen
/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build.make avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/coordinateeditor/CMakeFiles/CoordinateEditor.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 76%] Built target CoordinateEditor
/usr/bin/make  -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 76%] Automatic MOC for target InsertFragment
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 76%] Built target InsertFragment_autogen
/usr/bin/make  -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build.make avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/insertfragment/CMakeFiles/InsertFragment.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 77%] Built target InsertFragment
/usr/bin/make  -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 77%] Automatic MOC for target MolecularProperties
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 77%] Built target MolecularProperties_autogen
/usr/bin/make  -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build.make avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/molecularproperties/CMakeFiles/MolecularProperties.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 78%] Built target MolecularProperties
/usr/bin/make  -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 78%] Automatic MOC for target SVG
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 78%] Built target SVG_autogen
/usr/bin/make  -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/svg/CMakeFiles/SVG.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build.make avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/svg/CMakeFiles/SVG.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 79%] Built target SVG
/usr/bin/make  -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 79%] Automatic MOC for target Spectra
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 79%] Built target Spectra_autogen
/usr/bin/make  -f avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build.make avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/spectra/CMakeFiles/Spectra.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 80%] Built target Spectra
/usr/bin/make  -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 80%] Automatic MOC for target TemplateTool
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 80%] Built target TemplateTool_autogen
/usr/bin/make  -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build.make avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/templatetool/CMakeFiles/TemplateTool.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 81%] Built target TemplateTool
/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 81%] Automatic MOC for target VRML
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 81%] Built target VRML_autogen
/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build.make avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/vrml/CMakeFiles/VRML.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 82%] Built target VRML
/usr/bin/make  -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 82%] Automatic MOC for target apbs
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 82%] Built target apbs_autogen
/usr/bin/make  -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build.make avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/apbs/CMakeFiles/apbs.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 83%] Built target apbs
/usr/bin/make  -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 83%] Automatic MOC for target Cp2kInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 83%] Built target Cp2kInput_autogen
/usr/bin/make  -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build.make avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/cp2kinput/CMakeFiles/Cp2kInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 84%] Built target Cp2kInput
/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 84%] Automatic MOC for target GamessInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 84%] Built target GamessInput_autogen
/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build.make avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/gamessinput/CMakeFiles/GamessInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 85%] Built target GamessInput
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 85%] Automatic MOC for target commands
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 85%] Built target commands_autogen
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build.make avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/commandscripts/CMakeFiles/commands.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 86%] Built target commands
/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 86%] Automatic MOC for target QuantumInput
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 86%] Built target QuantumInput_autogen
/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build.make avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/quantuminput/CMakeFiles/QuantumInput.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 86%] Built target QuantumInput
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 86%] Automatic MOC for target ScriptCharges
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 86%] Built target ScriptCharges_autogen
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build.make avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/scriptcharges/CMakeFiles/ScriptCharges.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 87%] Built target ScriptCharges
/usr/bin/make  -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 87%] Automatic MOC for target ScriptFileFormats
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 87%] Built target ScriptFileFormats_autogen
/usr/bin/make  -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build.make avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/scriptfileformats/CMakeFiles/ScriptFileFormats.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 88%] Built target ScriptFileFormats
/usr/bin/make  -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 89%] Automatic MOC for target PluginDownloader
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 89%] Built target PluginDownloader_autogen
/usr/bin/make  -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build.make avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/plugindownloader/CMakeFiles/PluginDownloader.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Built target PluginDownloader
/usr/bin/make  -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Automatic MOC for target BallStick
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Built target BallStick_autogen
/usr/bin/make  -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build.make avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/ballandstick/CMakeFiles/BallStick.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Built target BallStick
/usr/bin/make  -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Automatic MOC for target CloseContacts
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 90%] Built target CloseContacts_autogen
/usr/bin/make  -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build.make avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/closecontacts/CMakeFiles/CloseContacts.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 91%] Built target CloseContacts
/usr/bin/make  -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 92%] Automatic MOC for target Force
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 92%] Built target Force_autogen
/usr/bin/make  -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/force/CMakeFiles/Force.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/force/CMakeFiles/Force.dir/build.make avogadro/qtplugins/force/CMakeFiles/Force.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/force/CMakeFiles/Force.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 92%] Built target Force
/usr/bin/make  -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 92%] Automatic MOC for target Licorice
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 92%] Built target Licorice_autogen
/usr/bin/make  -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build.make avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/licorice/CMakeFiles/Licorice.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Built target Licorice
/usr/bin/make  -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Automatic MOC for target Meshes
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Built target Meshes_autogen
/usr/bin/make  -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build.make avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/meshes/CMakeFiles/Meshes.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Built target Meshes
/usr/bin/make  -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Automatic MOC for target NonCovalent
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 93%] Built target NonCovalent_autogen
/usr/bin/make  -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build.make avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/noncovalent/CMakeFiles/NonCovalent.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 94%] Built target NonCovalent
/usr/bin/make  -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 94%] Automatic MOC for target VanDerWaals
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 94%] Built target VanDerWaals_autogen
/usr/bin/make  -f avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/build.make avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/vanderwaals/CMakeFiles/VanDerWaals.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 95%] Built target VanDerWaals
/usr/bin/make  -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 95%] Automatic MOC for target Wireframe
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe_autogen.dir/AutogenInfo.json Release
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/usr/bin/make  -f avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/build.make avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/wireframe/CMakeFiles/Wireframe.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 96%] Built target Wireframe
/usr/bin/make  -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 97%] Automatic MOC for target OverlayAxes
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 97%] Built target OverlayAxes_autogen
/usr/bin/make  -f avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/build.make avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/overlayaxes/CMakeFiles/OverlayAxes.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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[ 97%] Built target OverlayAxes
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 98%] Automatic MOC for target QTAIMExtension
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 98%] Built target QTAIMExtension_autogen
/usr/bin/make  -f avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build.make avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
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make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/qtaim/CMakeFiles/QTAIMExtension.dir/build'.
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[ 99%] Built target QTAIMExtension
/usr/bin/make  -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Automatic MOC for target QtPlugins
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins && /usr/bin/cmake -E cmake_autogen /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins_autogen.dir/AutogenInfo.json Release
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[ 99%] Built target QtPlugins_autogen
/usr/bin/make  -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/depend
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
cd /builddir/build/BUILD/avogadrolibs-1.98.1/build && /usr/bin/cmake -E cmake_depends "Unix Makefiles" /builddir/build/BUILD/avogadrolibs-1.98.1 /builddir/build/BUILD/avogadrolibs-1.98.1/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins /builddir/build/BUILD/avogadrolibs-1.98.1/build/avogadro/qtplugins/CMakeFiles/QtPlugins.dir/DependInfo.cmake "--color="
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/make  -f avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build.make avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build
make[2]: Entering directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
make[2]: Nothing to be done for 'avogadro/qtplugins/CMakeFiles/QtPlugins.dir/build'.
make[2]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
[100%] Built target QtPlugins
make[1]: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
/usr/bin/cmake -E cmake_progress_start /builddir/build/BUILD/avogadrolibs-1.98.1/build/CMakeFiles 0
/usr/bin/make  -f CMakeFiles/Makefile2 preinstall
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Install the project...
/usr/bin/cmake -P cmake_install.cmake
-- Install configuration: "Release"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/libgwavi.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/angletools.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/angleiterator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/array.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/avogadrocore.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/color3f.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/coordinateset.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/matrix.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/types.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/utilities.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/vector.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCore.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCore.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCore.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCore.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/atom.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/atomtyper.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/atomtyper-inline.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/atomutilities.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/basisset.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/bond.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/coordinateblockgenerator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/crystaltools.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/cube.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/dihedraliterator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/elements.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/gaussianset.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/gaussiansettools.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/graph.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/layer.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/layermanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/mesh.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/molecule.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/mutex.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/nameatomtyper.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/neighborperceiver.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/residue.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/ringperceiver.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/secondarystructure.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/slaterset.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/slatersettools.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/spacegroups.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/symbolatomtyper.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/unitcell.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/variant.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/variant-inline.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/variantmap.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/version.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/sharedmutex.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/avospglib.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/core/avogadrocoreexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCalc.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCalc.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCalc.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCalc.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/chargemodel.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/chargemanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/defaultmodel.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/energycalculator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/energymanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/lennardjones.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/calc/avogadrocalcexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroIO.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroIO.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroIO.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroIO.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/cjsonformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/cmlformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/dcdformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/fileformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/fileformatmanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/gromacsformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/mdlformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/vaspformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/pdbformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/xyzformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/trrformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/turbomoleformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/lammpsformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/hdf5dataformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/mmtfformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/io/avogadroioexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQuantumIO.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQuantumIO.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQuantumIO.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQuantumIO.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/gamessus.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/gaussianfchk.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/gaussiancube.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/genericoutput.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/molden.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/mopacaux.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/nwchemjson.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/nwchemlog.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/orca.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/quantumio/avogadroquantumioexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroRendering.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroRendering.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroRendering.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroRendering.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/arcsector.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/arcstrip.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/arrowgeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/avogadrogl.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/avogadrorendering.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/beziergeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/bsplinegeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/bufferobject.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/camera.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/cartoongeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/curvegeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/cylindergeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/dashedlinegeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/drawable.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/geometrynode.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/geometryvisitor.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/groupnode.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/glrenderer.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/glrendervisitor.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/linestripgeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/meshgeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/node.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/plyvisitor.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/povrayvisitor.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/primitive.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/quad.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/quadoutline.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/scene.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/shader.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/shaderprogram.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/solidpipeline.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/spheregeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/textlabel2d.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/textlabel3d.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/textlabelbase.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/textproperties.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/textrenderstrategy.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/texture2d.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/transformnode.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/visitor.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/volumegeometry.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/vrmlvisitor.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/rendering/avogadrorenderingexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtGui.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtGui.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtGui.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtGui.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/backgroundfileformat.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/colorbutton.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/containerwidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/customelementdialog.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/elementtranslator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/extensionplugin.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/filebrowsewidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/fileformatdialog.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/generichighlighter.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/hydrogentools.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/interfacescript.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/interfacewidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/jsonwidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/layermodel.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/rwlayermanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/meshgenerator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/molecule.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/moleculemodel.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/multiviewwidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/periodictableview.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/persistentatom.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/persistentbond.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/pluginlayermanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/pythonscript.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/rwmolecule.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/sceneplugin.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/scenepluginmodel.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/scriptloader.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/toolplugin.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/utilities.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/viewfactory.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtgui/avogadroqtguiexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtOpenGL.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtOpenGL.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtOpenGL.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtOpenGL.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtopengl/activeobjects.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtopengl/glwidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtopengl/qttextrenderstrategy.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtopengl/avogadroqtopenglexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroMoleQueue.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroMoleQueue.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroMoleQueue.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroMoleQueue.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/batchjob.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/inputgenerator.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/inputgeneratordialog.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/inputgeneratorwidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/molequeuedialog.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/molequeuemanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/molequeuequeuelistmodel.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/molequeuewidget.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/molequeue/avogadromolequeueexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/ThreeDMol.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/ApplyColors.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/AlignTool.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/BondCentric.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Bonding.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Cartoons.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Centroid.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/CopyPaste.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Crystal.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/CrystalScene.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/CustomElements.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Editor.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/FetchPDB.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Focus.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Forcefield.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/ani2x.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/gaff.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/gfn1.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/gfn2.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/gfnff.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/mmff94.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/energy/uff.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Hydrogens.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/ImportPQR.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/NucleicInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Label.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/LabelEditor.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/LineFormatInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Manipulator.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/MeasureTool.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Navigator.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/NetworkDatabases.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/OpenBabel.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/PlayerTool.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/PLY.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/POVRay.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/PropertyTables.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/ResetView.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Select.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Selection.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/SpaceGroup.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Surfaces.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/LammpsInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/OpenMMInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/CoordinateEditor.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/InsertFragment.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/ZSM-5.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/ZSM-5.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/ZON.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/ZON.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/YUG.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/YUG.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/WEN.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/WEN.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/WEI.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/WEI.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VSV.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VSV.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VNI.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VNI.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VFI.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VFI.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VET.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/VET.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UWY.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UWY.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UTL.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UTL.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/USI.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/USI.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UOZ.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UOZ.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UOS.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UOS.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UFI.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UFI.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UEI.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/UEI.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TUN.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TUN.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TSC.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TSC.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TON.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TON.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TOL.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TOL.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/THO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/THO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TER.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/zeolites/TER.cif
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/ZnS-Sphalerite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/SnS-Herzenbergite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/SnS-Herzenbergite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/Sb2S3-Stibnite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/Sb2S3-Stibnite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/PbS-Galena.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/PbS-Galena.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/HgS-Metacinnabar.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/HgS-Metacinnabar.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/FeS2-Pyrite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/FeS2-Pyrite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/FeS.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/FeS.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/CdS-Hawleyite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/CdS-Hawleyite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/CdS-Greenockite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/CdS-Greenockite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/Bi2S3-Bismuthinite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfides/Bi2S3-Bismuthinite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/SrSO4-Celestine.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/SrSO4-Celestine.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/PbSO4-Anglesite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/PbSO4-Anglesite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/Na2SO4.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/Na2SO4.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/MgSO4.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/MgSO4.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/H4SO5.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/H4SO5.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CuSO4.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CuSO4.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CoSO4.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CoSO4.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CaSO4-Anhydrite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CaSO4-Anhydrite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CaSO4-2(H2O)-Gypsum.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/CaSO4-2(H2O)-Gypsum.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/BaSO4-Barite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/sulfates/BaSO4-Barite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/silicates
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/silicates/Be3Al2(SiO3)6-Beryl.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/ZnSe.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/ZnSe.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/Sb2Se3-Antimonselite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/Sb2Se3-Antimonselite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/PbSe-Clausthalite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/PbSe-Clausthalite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/HgSe-Tiemannite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/HgSe-Tiemannite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/CdSe-Cadmoselite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/CdSe-Cadmoselite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/BiSe.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/BiSe.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/Bi2Se3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/selenides/Bi2Se3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/plugin.json
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/InP.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/InP.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/GaP.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/GaP.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/BP.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/BP.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/AlP.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/phosphides/AlP.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/ZrO2-Cubic.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/ZrO2-Cubic.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/ZrO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/ZrO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/ZnO-Zincite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/ZnO-Zincite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/YbO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/YbO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Y2O3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Y2O3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/WO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/WO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/VO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/VO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/VO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/VO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/V2O5-Shcherbinaite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/V2O5-Shcherbinaite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/V2O3-Karelianite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/V2O3-Karelianite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/UO2-Uraninite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/UO2-Uraninite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/UO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/UO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TiO2-Rutile.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TiO2-Rutile.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TiO2-Brookite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TiO2-Brookite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TiO2-Anatase.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TiO2-Anatase.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TaO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/TaO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SrO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SrO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SnO2-Cassiterite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SnO2-Cassiterite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SnO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SnO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SmO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SmO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Stishovite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Stishovite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Quartz-beta.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Quartz-beta.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Quartz-alpha.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Quartz-alpha.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Cristobalite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Cristobalite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Coesite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/SiO2-Coesite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Sc2O3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Sc2O3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/RuO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/RuO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Rh2O3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Rh2O3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Rb2O.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Rb2O.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PtO2-beta.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PtO2-beta.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PdO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PdO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PbO2-Scrutinyite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PbO2-Scrutinyite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PbO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/PbO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NiO-Bunsenite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NiO-Bunsenite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NiFe2O4.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NiFe2O4.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NbO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NbO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NbO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/NbO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Na2O.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Na2O.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MoO3-Molybdite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MoO3-Molybdite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MoO2-Tugarinovite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MoO2-Tugarinovite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MnO2-Pyrolusite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MnO2-Pyrolusite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MnO-Manganosite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MnO-Manganosite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MgO-Periclase.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/MgO-Periclase.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Li2O.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Li2O.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/La2O3-LanthanumOxide-A.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/La2O3-LanthanumOxide-A.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/K2O.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/K2O.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/IrO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/IrO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/In2O3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/In2O3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/In2O3-IndiumOxide.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/In2O3-IndiumOxide.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/HfO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/HfO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/GeO2.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/GeO2.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/GeO2-Argutite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/GeO2-Argutite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/GeO2-Argutite-tetrag.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/GeO2-Argutite-tetrag.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/FeO-Wustite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/FeO-Wustite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Fe3O4-Magnetite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Fe3O4-Magnetite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Fe2O3-Hematite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Fe2O3-Hematite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CuO-Tenorite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CuO-Tenorite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Cu2O-Cuprite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Cu2O-Cuprite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Cr2O3-Eskolaite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Cr2O3-Eskolaite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CoO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CoO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CoFe2O4.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CoFe2O4.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CeO2-Cerianite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CeO2-Cerianite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CdO-Monteponite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CdO-Monteponite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CaO-Lime.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/CaO-Lime.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/BaO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/BaO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/B6O.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/B6O.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/B2O3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/B2O3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Al2O3-Corundum.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Al2O3-Corundum.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/AgO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/AgO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Ag2O.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/Ag2O.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/(MgAl2)O4-Spinel.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/oxides/(MgAl2)O4-Spinel.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/YBa2Cu3O6.9-YBCO.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/YBa2Cu3O6.9-YBCO.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/Pb1Ti0.35Zr0.65O3-PZT-rhomb.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/Pb1Ti0.35Zr0.65O3-PZT-rhomb.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/Pb1Ti0.35Zr0.65O3-PZT-cub.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/Pb1Ti0.35Zr0.65O3-PZT-cub.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/LiNbO3-LithiumNiobate.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/LiNbO3-LithiumNiobate.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/LaAlO3.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/LaAlO3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/H3N-Ammonia.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/H3N-Ammonia.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/FeMnO3-Bixbyite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/FeMnO3-Bixbyite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/CaC2O6.375H6-Oxalate-Weddellite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/CaC2O6.375H6-Oxalate-Weddellite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/Ca2C4O10H2.57-Oxalate-Whewellite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/Ca2C4O10H2.57-Oxalate-Whewellite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/C10H10Fe-Ferrocene.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/C10H10Fe-Ferrocene.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/(NH4)MgPO4-6(H2O)-Struvite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/other/(NH4)MgPO4-6(H2O)-Struvite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/TiN-Osbornite.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/TiN-Osbornite.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/Si3N4-beta.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/Si3N4-beta.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/InN.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/InN.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/GaN.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/nitrides/GaN.cif
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/ice/H2O-Ice-II.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/hydroxides
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/PbFCl-Matlockite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/NaCl-Halite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/KCl-Sylvite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/FeCl3-Molysite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/CaF2-Fluorite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/AlCl3.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/halides/AgCl-Chlorargyrite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/elements/Zr-Zirconium.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/elements/Yb-Ytterbium.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/clays/FeSi2O6H-Nontronite.png
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-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/arsenides/AlAs.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides/InSb.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides/InSb.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides/GaSb.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides/GaSb.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides/AlSb.png
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/antimonides/AlSb.cif
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/avogadro2/crystals/README.md
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/MolecularProperties.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/SVG.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Spectra.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/TemplateTool.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/VRML.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/apbs.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Cp2kInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/GamessInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/commands.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/QuantumInput.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/ScriptCharges.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/charges/xtb.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts/charges/antechamber.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/ScriptFileFormats.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/PluginDownloader.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/BallStick.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/CloseContacts.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Force.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Licorice.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Meshes.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/NonCovalent.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/VanDerWaals.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/Wireframe.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/OverlayAxes.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/QTAIMExtension.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/staticplugins/QTAIMScenePlugin.a
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtPlugins.so.1.98.1
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtPlugins.so.1
-- Set runtime path of "/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtPlugins.so.1.98.1" to "/usr/lib64"
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtPlugins.so
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtplugins/pluginmanager.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtplugins/pluginfactory.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtplugins/avogadrostaticqtplugins.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/include/avogadro2/avogadro/qtplugins/avogadroqtpluginsexport.h
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/AvogadroLibs/avogadrolibs/README.md
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/AvogadroLibs/avogadrolibs/CONTRIBUTING.md
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/AvogadroLibs/avogadrolibs/LICENSE
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/cmake/avogadrolibs/AvogadroLibsConfig.cmake
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/cmake/avogadrolibs/AvogadroLibsConfigVersion.cmake
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/cmake/avogadrolibs/FindEigen3.cmake
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/cmake/avogadrolibs/Findlibmsym.cmake
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/cmake/avogadrolibs/AvogadroLibsTargets.cmake
-- Installing: /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/cmake/avogadrolibs/AvogadroLibsTargets-release.cmake
make: Leaving directory '/builddir/build/BUILD/avogadrolibs-1.98.1/build'
+ cp -a /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/
+ /usr/bin/python3 /usr/lib/rpm/redhat/pathfix.py -pn -i /usr/bin/python3 /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/antechamber.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/xtb.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/ani2x.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gaff.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn1.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn2.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfnff.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/mmff94.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/uff.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/antechamber.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/xtb.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/ani2x.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gaff.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn1.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn2.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfnff.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/mmff94.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/uff.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py: no change
/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py: no change
+ ln -sf /usr/lib64/python3.12/site-packages/avogadro2/scripts /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/avogadro2/scripts
+ chrpath -d /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCalc.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroCore.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroIO.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroMoleQueue.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtGui.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtOpenGL.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQtPlugins.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroQuantumIO.so /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/libAvogadroRendering.so
+ rm -rf /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc
+ /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 1.98.1-1.fc40 --unique-debug-suffix -1.98.1-1.fc40.x86_64 --unique-debug-src-base avogadro2-libs-1.98.1-1.fc40.x86_64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 110000000 -S debugsourcefiles.list /builddir/build/BUILD/avogadrolibs-1.98.1
find-debuginfo: starting
Extracting debug info from 9 files
DWARF-compressing 9 files
sepdebugcrcfix: Updated 9 CRC32s, 0 CRC32s did match.
Creating .debug symlinks for symlinks to ELF files
Copying sources found by 'debugedit -l' to /usr/src/debug/avogadro2-libs-1.98.1-1.fc40.x86_64
17363 blocks
find-debuginfo: done
+ /usr/lib/rpm/check-buildroot
+ /usr/lib/rpm/redhat/brp-ldconfig
+ /usr/lib/rpm/brp-compress
+ /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip
+ /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip
+ /usr/lib/rpm/check-rpaths
+ /usr/lib/rpm/redhat/brp-mangle-shebangs
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/antechamber.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/charges/xtb.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/uff.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/mmff94.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfnff.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn2.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gfn1.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/gaff.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/energy/ani2x.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/formatScripts/zyx.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/terachem.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/qchem.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/pyscf.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/psi4.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/orca.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/nwchem.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/mopac.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/molpro.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gaussian.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/gamessuk.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/python3.12/site-packages/avogadro2/scripts/inputGenerators/dalton.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/charges/antechamber.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/charges/xtb.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/uff.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/mmff94.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/gfnff.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/gfn2.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/gfn1.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/gaff.py is executable but has no shebang, removing executable bit
*** WARNING: ./usr/lib64/avogadro2/scripts/energy/ani2x.py is executable but has no shebang, removing executable bit
+ /usr/lib/rpm/brp-remove-la-files
+ env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2
Bytecompiling .py files below /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/lib64/python3.12 using python3.12
+ /usr/lib/rpm/redhat/brp-python-hardlink
Processing files: avogadro2-libs-1.98.1-1.fc40.x86_64
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.KncZI2
+ umask 022
+ cd /builddir/build/BUILD
+ cd avogadrolibs-1.98.1
+ DOCDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/README.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/thirdparty/libgwavi/README-libgwavi.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/avogadrogenerators/README-avogenerators.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.a5uw9m
+ umask 022
+ cd /builddir/build/BUILD
+ cd avogadrolibs-1.98.1
+ LICENSEDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/LICENSE /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/molecules/LICENSE-molecules /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs
+ RPM_EC=0
++ jobs -p
+ exit 0
warning: absolute symlink: /usr/lib64/avogadro2/scripts/scripts -> /usr/lib64/python3.12/site-packages/avogadro2/scripts
Provides: avogadro2-libs = 1.98.1-1.fc40 avogadro2-libs(x86-64) = 1.98.1-1.fc40 avogadro2-libs-static = 0:1.98.1-1.fc40 libAvogadroCalc.so.1()(64bit) libAvogadroCore.so.1()(64bit) libAvogadroIO.so.1()(64bit) libAvogadroMoleQueue.so.1()(64bit) libAvogadroQtGui.so.1()(64bit) libAvogadroQtOpenGL.so.1()(64bit) libAvogadroQtPlugins.so.1()(64bit) libAvogadroQuantumIO.so.1()(64bit) libAvogadroRendering.so.1()(64bit) python-avogadro2-libs = 1.98.1-1.fc40 python3.12-avogadro2-libs = 1.98.1-1.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: ld-linux-x86-64.so.2()(64bit) ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) libAvogadroCalc.so.1()(64bit) libAvogadroCore.so.1()(64bit) libAvogadroIO.so.1()(64bit) libAvogadroMoleQueue.so.1()(64bit) libAvogadroQtGui.so.1()(64bit) libAvogadroQtOpenGL.so.1()(64bit) libAvogadroQuantumIO.so.1()(64bit) libAvogadroRendering.so.1()(64bit) libGLEW.so.2.2()(64bit) libGLX.so.0()(64bit) libOpenGL.so.0()(64bit) libQt5Concurrent.so.5()(64bit) libQt5Concurrent.so.5(Qt_5)(64bit) libQt5Core.so.5()(64bit) libQt5Core.so.5(Qt_5)(64bit) libQt5Core.so.5(Qt_5.15)(64bit) libQt5Gui.so.5()(64bit) libQt5Gui.so.5(Qt_5)(64bit) libQt5Network.so.5()(64bit) libQt5Network.so.5(Qt_5)(64bit) libQt5Svg.so.5()(64bit) libQt5Svg.so.5(Qt_5)(64bit) libQt5Widgets.so.5()(64bit) libQt5Widgets.so.5(Qt_5)(64bit) libarchive.so.13()(64bit) libc.so.6()(64bit) libc.so.6(GLIBC_2.14)(64bit) libc.so.6(GLIBC_2.2.5)(64bit) libc.so.6(GLIBC_2.3)(64bit) libc.so.6(GLIBC_2.3.4)(64bit) libc.so.6(GLIBC_2.32)(64bit) libc.so.6(GLIBC_2.34)(64bit) libc.so.6(GLIBC_2.38)(64bit) libc.so.6(GLIBC_2.4)(64bit) libgcc_s.so.1()(64bit) libgcc_s.so.1(GCC_3.0)(64bit) libgcc_s.so.1(GCC_3.3.1)(64bit) libgcc_s.so.1(GCC_3.4)(64bit) libgcc_s.so.1(GCC_4.0.0)(64bit) libhdf5.so.200()(64bit) libm.so.6()(64bit) libm.so.6(GLIBC_2.2.5)(64bit) libm.so.6(GLIBC_2.27)(64bit) libm.so.6(GLIBC_2.29)(64bit) libm.so.6(GLIBC_2.38)(64bit) libstdc++.so.6()(64bit) libstdc++.so.6(CXXABI_1.3)(64bit) libstdc++.so.6(CXXABI_1.3.8)(64bit) libstdc++.so.6(CXXABI_1.3.9)(64bit) libstdc++.so.6(GLIBCXX_3.4)(64bit) libstdc++.so.6(GLIBCXX_3.4.11)(64bit) libstdc++.so.6(GLIBCXX_3.4.14)(64bit) libstdc++.so.6(GLIBCXX_3.4.15)(64bit) libstdc++.so.6(GLIBCXX_3.4.20)(64bit) libstdc++.so.6(GLIBCXX_3.4.21)(64bit) libstdc++.so.6(GLIBCXX_3.4.26)(64bit) libstdc++.so.6(GLIBCXX_3.4.29)(64bit) libstdc++.so.6(GLIBCXX_3.4.30)(64bit) libstdc++.so.6(GLIBCXX_3.4.32)(64bit) libstdc++.so.6(GLIBCXX_3.4.9)(64bit) libsymspg.so.1()(64bit) python(abi) = 3.12 rtld(GNU_HASH)
Obsoletes: python-avogadro2-libs < 1.98.1-1.fc40
Processing files: avogadro2-libs-devel-1.98.1-1.fc40.x86_64
Provides: avogadro2-libs-devel = 1.98.1-1.fc40 avogadro2-libs-devel(x86-64) = 1.98.1-1.fc40 cmake(AvogadroLibs) = 1.98.1 cmake(avogadrolibs) = 1.98.1 libgwavi-static
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Requires: cmake-filesystem(x86-64) libAvogadroCalc.so.1()(64bit) libAvogadroCore.so.1()(64bit) libAvogadroIO.so.1()(64bit) libAvogadroMoleQueue.so.1()(64bit) libAvogadroQtGui.so.1()(64bit) libAvogadroQtOpenGL.so.1()(64bit) libAvogadroQtPlugins.so.1()(64bit) libAvogadroQuantumIO.so.1()(64bit) libAvogadroRendering.so.1()(64bit)
Processing files: avogadro2-libs-doc-1.98.1-1.fc40.noarch
Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.RiVzHs
+ umask 022
+ cd /builddir/build/BUILD
+ cd avogadrolibs-1.98.1
+ DOCDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs-doc
+ export LC_ALL=
+ LC_ALL=
+ export DOCDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs-doc
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/README.md /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs-doc
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/build/docs/html /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/doc/avogadro2-libs-doc
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.bdN6Ox
+ umask 022
+ cd /builddir/build/BUILD
+ cd avogadrolibs-1.98.1
+ LICENSEDIR=/builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs-doc
+ export LC_ALL=
+ LC_ALL=
+ export LICENSEDIR
+ /usr/bin/mkdir -p /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs-doc
+ cp -pr /builddir/build/BUILD/avogadrolibs-1.98.1/LICENSE /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64/usr/share/licenses/avogadro2-libs-doc
+ RPM_EC=0
++ jobs -p
+ exit 0
Provides: avogadro2-libs-doc = 1.98.1-1.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: avogadro2-libs-debugsource-1.98.1-1.fc40.x86_64
Provides: avogadro2-libs-debugsource = 1.98.1-1.fc40 avogadro2-libs-debugsource(x86-64) = 1.98.1-1.fc40
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Processing files: avogadro2-libs-debuginfo-1.98.1-1.fc40.x86_64
Provides: avogadro2-libs-debuginfo = 1.98.1-1.fc40 avogadro2-libs-debuginfo(x86-64) = 1.98.1-1.fc40 debuginfo(build-id) = 2110047964fd869340c558c1d0518a065a34d2f6 debuginfo(build-id) = 49939c155578a91a1f4379df2b6cd807b2e0e280 debuginfo(build-id) = 5ab5a85754a0a6fbfdd5a29318cce55c907847cb debuginfo(build-id) = 77726297a98bd7c5b9dd92799e659188a19276a7 debuginfo(build-id) = 7a08aa4d1eb0e69708f42471a4b9daa4975b1903 debuginfo(build-id) = b1e07357653afacb24230f2b800c98a14dc2aadb debuginfo(build-id) = b6fe57a453ab004423e4903742528375ae5fd543 debuginfo(build-id) = c24d9859d56bc429606edfa71d9367c09093cf67 debuginfo(build-id) = e1dd48c8d55f31a0c8eff954ee4dbe012714290a libAvogadroCalc.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroCore.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroIO.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroMoleQueue.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroQtGui.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroQtOpenGL.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroQtPlugins.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroQuantumIO.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit) libAvogadroRendering.so.1.98.1-1.98.1-1.fc40.x86_64.debug()(64bit)
Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1
Recommends: avogadro2-libs-debugsource(x86-64) = 1.98.1-1.fc40
Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64
Wrote: /builddir/build/RPMS/avogadro2-libs-1.98.1-1.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/avogadro2-libs-doc-1.98.1-1.fc40.noarch.rpm
Wrote: /builddir/build/RPMS/avogadro2-libs-debugsource-1.98.1-1.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/avogadro2-libs-devel-1.98.1-1.fc40.x86_64.rpm
Wrote: /builddir/build/RPMS/avogadro2-libs-debuginfo-1.98.1-1.fc40.x86_64.rpm
Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.r9Gbr4
+ umask 022
+ cd /builddir/build/BUILD
+ cd avogadrolibs-1.98.1
+ /usr/bin/rm -rf /builddir/build/BUILDROOT/avogadro2-libs-1.98.1-1.fc40.x86_64
+ RPM_EC=0
++ jobs -p
+ exit 0
Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.3y6lp2
+ umask 022
+ cd /builddir/build/BUILD
+ rm -rf /builddir/build/BUILD/avogadrolibs-1.98.1-SPECPARTS
+ rm -rf avogadrolibs-1.98.1 avogadrolibs-1.98.1.gemspec
+ RPM_EC=0

RPM build warnings:
++ jobs -p
+ exit 0
    absolute symlink: /usr/lib64/avogadro2/scripts/scripts -> /usr/lib64/python3.12/site-packages/avogadro2/scripts
Finish: rpmbuild avogadro2-libs-1.98.1-1.fc40.src.rpm
Finish: build phase for avogadro2-libs-1.98.1-1.fc40.src.rpm
INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan
INFO: /var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root/var/log/dnf.rpm.log
/var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root/var/log/dnf.librepo.log
/var/lib/mock/fedora-rawhide-x86_64-1701804424.642033/root/var/log/dnf.log
INFO: Done(/var/lib/copr-rpmbuild/results/avogadro2-libs-1.98.1-1.fc40.src.rpm) Config(child) 18 minutes 18 seconds
INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results
INFO: Cleaning up build root ('cleanup_on_success=True')
Start: clean chroot
INFO: unmounting tmpfs.
Finish: clean chroot
Finish: run
Running RPMResults tool
Package info:
{
    "packages": [
        {
            "name": "avogadro2-libs",
            "epoch": null,
            "version": "1.98.1",
            "release": "1.fc40",
            "arch": "src"
        },
        {
            "name": "avogadro2-libs-devel",
            "epoch": null,
            "version": "1.98.1",
            "release": "1.fc40",
            "arch": "x86_64"
        },
        {
            "name": "avogadro2-libs",
            "epoch": null,
            "version": "1.98.1",
            "release": "1.fc40",
            "arch": "x86_64"
        },
        {
            "name": "avogadro2-libs-debugsource",
            "epoch": null,
            "version": "1.98.1",
            "release": "1.fc40",
            "arch": "x86_64"
        },
        {
            "name": "avogadro2-libs-doc",
            "epoch": null,
            "version": "1.98.1",
            "release": "1.fc40",
            "arch": "noarch"
        },
        {
            "name": "avogadro2-libs-debuginfo",
            "epoch": null,
            "version": "1.98.1",
            "release": "1.fc40",
            "arch": "x86_64"
        }
    ]
}
RPMResults finished