Warning: Permanently added '3.95.210.110' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/8114939-fedora-rawhide-aarch64 --chroot fedora-rawhide-aarch64 Version: 1.0 PID: 43249 Logging PID: 43250 Task: {'allow_user_ssh': False, 'appstream': False, 'background': True, 'build_id': 8114939, 'buildroot_pkgs': [], 'chroot': 'fedora-rawhide-aarch64', 'enable_net': False, 'fedora_review': False, 'git_hash': '29d736dade7c79901d1d0a92f8ac4c1e303b9cfc', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/ProDy', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'ProDy', 'package_version': '2.4.1-5', 'project_dirname': 'cython-numpy-scipy-rebuild.checker', 'project_name': 'cython-numpy-scipy-rebuild.checker', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/cython-numpy-scipy-rebuild.checker/fedora-rawhide-aarch64/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}], 'sandbox': 'psimovec/cython-numpy-scipy-rebuild.checker--psimovec', 'source_json': {}, 'source_type': None, 'ssh_public_keys': None, 'storage': 0, 'submitter': 'psimovec', 'tags': [], 'task_id': '8114939-fedora-rawhide-aarch64', 'timeout': 115200, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/ProDy /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/cython-numpy-scipy-rebuild.checker/ProDy', '/var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy'... Running: git checkout 29d736dade7c79901d1d0a92f8ac4c1e303b9cfc -- cmd: ['git', 'checkout', '29d736dade7c79901d1d0a92f8ac4c1e303b9cfc', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy rc: 0 stdout: stderr: Note: switching to '29d736dade7c79901d1d0a92f8ac4c1e303b9cfc'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 29d736d automatic import of ProDy Running: dist-git-client sources cmd: ['dist-git-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading ProDy-2.4.1.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o ProDy-2.4.1.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/cython-numpy-scipy-rebuild.checker/ProDy/ProDy-2.4.1.tar.gz/md5/ed3fa7549c21d8c68ed832b970952fe4/ProDy-2.4.1.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 25.9M 100 25.9M 0 0 25.6M 0 0:00:01 0:00:01 --:--:-- 25.6M INFO: Reading stdout from command: md5sum ProDy-2.4.1.tar.gz /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated Running (timeout=115200): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728337787.657920 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.9 starting (python version = 3.12.1, NVR = mock-5.9-1.fc39), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy/ProDy.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1728337787.657920 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy/ProDy.spec) Config(fedora-rawhide-aarch64) Start: clean chroot Finish: clean chroot Mock Version: 5.9 INFO: Mock Version: 5.9 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728337787.657920/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:rawhide INFO: Pulling image: registry.fedoraproject.org/fedora:rawhide INFO: Copy content of container registry.fedoraproject.org/fedora:rawhide to /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728337787.657920/root INFO: Checking that registry.fedoraproject.org/fedora:rawhide image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:rawhide with podman image mount INFO: image registry.fedoraproject.org/fedora:rawhide as /var/lib/containers/storage/overlay/e4fca2b28852db902c98b90449a9c023a71b79ad7401b7bf408a014991b85e74/merged INFO: umounting image registry.fedoraproject.org/fedora:rawhide (/var/lib/containers/storage/overlay/e4fca2b28852db902c98b90449a9c023a71b79ad7401b7bf408a014991b85e74/merged) with podman image umount INFO: Package manager dnf5 detected and used (fallback) INFO: Not updating bootstrap chroot, bootstrap_image_ready=True Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1728337787.657920/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf5 detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 dnf5-5.2.6.2-1.fc42.aarch64 dnf5-plugins-5.2.6.2-1.fc42.aarch64 Start: installing minimal buildroot with dnf5 Updating and loading repositories: fedora 100% | 153.7 KiB/s | 7.8 KiB | 00m00s Copr repository 100% | 37.3 KiB/s | 1.5 KiB | 00m00s Copr repository 100% | 7.2 MiB/s | 331.6 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing group/module packages: bash aarch64 5.2.32-2.fc42 fedora 8.3 MiB bzip2 aarch64 1.0.8-19.fc41 fedora 427.6 KiB coreutils aarch64 9.5-10.fc42 fedora 20.8 MiB cpio aarch64 2.15-2.fc41 fedora 1.2 MiB diffutils aarch64 3.10-8.fc41 fedora 2.1 MiB fedora-release-common noarch 42-0.3 fedora 19.4 KiB findutils aarch64 1:4.10.0-4.fc41 fedora 2.1 MiB gawk aarch64 5.3.0-4.fc41 fedora 4.2 MiB glibc-minimal-langpack aarch64 2.40.9000-1.fc42 fedora 0.0 B grep aarch64 3.11-9.fc41 fedora 1.1 MiB gzip aarch64 1.13-2.fc41 fedora 488.9 KiB info aarch64 7.1.1-1.fc42 fedora 613.6 KiB patch aarch64 2.7.6-25.fc41 fedora 390.6 KiB redhat-rpm-config noarch 296-1.fc42 fedora 186.6 KiB rpm-build aarch64 4.19.94-1.fc42 fedora 1.4 MiB sed aarch64 4.9-3.fc41 fedora 1.0 MiB shadow-utils aarch64 2:4.16.0-4.fc42 fedora 7.3 MiB tar aarch64 2:1.35-4.fc41 fedora 3.1 MiB unzip aarch64 6.0-64.fc41 fedora 726.7 KiB util-linux aarch64 2.40.2-8.fc42 fedora 16.9 MiB which aarch64 2.21-42.fc41 fedora 248.2 KiB xz aarch64 1:5.6.3-1.fc42 fedora 1.5 MiB Installing dependencies: add-determinism aarch64 0.3.6-1.fc41 fedora 2.0 MiB alternatives aarch64 1.30-1.fc41 fedora 218.3 KiB ansible-srpm-macros noarch 1-16.fc41 fedora 35.7 KiB audit-libs aarch64 4.0.2-1.fc41 fedora 547.4 KiB authselect aarch64 1.5.0-7.fc41 fedora 309.5 KiB authselect-libs aarch64 1.5.0-7.fc41 fedora 931.9 KiB basesystem noarch 11-21.fc41 fedora 0.0 B binutils aarch64 2.43.1-1.fc42 fedora 33.0 MiB build-reproducibility-srpm-macros noarch 0.3.6-1.fc41 fedora 735.0 B bzip2-libs aarch64 1.0.8-19.fc41 fedora 200.7 KiB ca-certificates noarch 2024.2.69_v8.0.401-2.fc42 fedora 2.6 MiB coreutils-common aarch64 9.5-10.fc42 fedora 11.2 MiB cracklib aarch64 2.9.11-6.fc41 fedora 935.0 KiB crypto-policies noarch 20240927-1.git93b7251.fc42 fedora 136.8 KiB curl aarch64 8.10.1-2.fc42 fedora 581.3 KiB cyrus-sasl-lib aarch64 2.1.28-27.fc41 fedora 3.1 MiB debugedit aarch64 5.0-17.fc41 fedora 499.2 KiB dwz aarch64 0.15-7.fc41 fedora 386.8 KiB ed aarch64 1.20.2-2.fc41 fedora 282.8 KiB efi-srpm-macros noarch 5-12.fc41 fedora 40.1 KiB elfutils aarch64 0.191-8.fc41 fedora 4.9 MiB elfutils-debuginfod-client aarch64 0.191-8.fc41 fedora 396.9 KiB elfutils-default-yama-scope noarch 0.191-8.fc41 fedora 1.8 KiB elfutils-libelf aarch64 0.191-8.fc41 fedora 1.3 MiB elfutils-libs aarch64 0.191-8.fc41 fedora 938.3 KiB fedora-gpg-keys noarch 42-0.2 fedora 126.4 KiB fedora-release noarch 42-0.3 fedora 0.0 B fedora-release-identity-basic noarch 42-0.3 fedora 694.0 B fedora-repos noarch 42-0.2 fedora 4.9 KiB fedora-repos-rawhide noarch 42-0.2 fedora 2.2 KiB file aarch64 5.45-7.fc41 fedora 267.5 KiB file-libs aarch64 5.45-7.fc41 fedora 10.0 MiB filesystem aarch64 3.18-29.fc42 fedora 106.0 B fonts-srpm-macros noarch 1:2.0.5-17.fc41 fedora 55.8 KiB forge-srpm-macros noarch 0.4.0-1.fc42 fedora 38.9 KiB fpc-srpm-macros noarch 1.3-13.fc41 fedora 144.0 B gdb-minimal aarch64 15.1-2.fc42 fedora 13.0 MiB gdbm aarch64 1:1.23-7.fc41 fedora 928.5 KiB gdbm-libs aarch64 1:1.23-7.fc41 fedora 426.0 KiB ghc-srpm-macros noarch 1.9.2-1.fc42 fedora 779.0 B glibc aarch64 2.40.9000-1.fc42 fedora 9.2 MiB glibc-common aarch64 2.40.9000-1.fc42 fedora 2.6 MiB glibc-gconv-extra aarch64 2.40.9000-1.fc42 fedora 49.2 MiB gmp aarch64 1:6.3.0-2.fc41 fedora 722.0 KiB gnat-srpm-macros noarch 6-6.fc41 fedora 1.0 KiB go-srpm-macros noarch 3.6.0-3.fc41 fedora 60.8 KiB jansson aarch64 2.13.1-10.fc41 fedora 220.5 KiB kernel-srpm-macros noarch 1.0-24.fc41 fedora 1.9 KiB keyutils-libs aarch64 1.6.3-4.fc41 fedora 226.4 KiB krb5-libs aarch64 1.21.3-2.fc41 fedora 3.3 MiB libacl aarch64 2.3.2-2.fc41 fedora 196.1 KiB libarchive aarch64 3.7.6-1.fc42 fedora 974.8 KiB libattr aarch64 2.5.2-4.fc41 fedora 196.6 KiB libblkid aarch64 2.40.2-8.fc42 fedora 418.6 KiB libbrotli aarch64 1.1.0-5.fc41 fedora 1.1 MiB libcap aarch64 2.70-4.fc41 fedora 1.4 MiB libcap-ng aarch64 0.8.5-3.fc41 fedora 417.2 KiB libcom_err aarch64 1.47.1-3.fc41 fedora 239.3 KiB libcurl aarch64 8.10.1-2.fc42 fedora 858.4 KiB libeconf aarch64 0.6.2-3.fc41 fedora 206.1 KiB libevent aarch64 2.1.12-14.fc41 fedora 1.5 MiB libfdisk aarch64 2.40.2-8.fc42 fedora 482.9 KiB libffi aarch64 3.4.6-3.fc42 fedora 282.4 KiB libgcc aarch64 14.2.1-4.fc42 fedora 350.2 KiB libgomp aarch64 14.2.1-4.fc42 fedora 567.3 KiB libidn2 aarch64 2.3.7-2.fc41 fedora 457.2 KiB libmount aarch64 2.40.2-8.fc42 fedora 483.9 KiB libnghttp2 aarch64 1.63.0-1.fc42 fedora 262.2 KiB libnsl2 aarch64 2.0.1-2.fc41 fedora 222.0 KiB libpkgconf aarch64 2.3.0-1.fc42 fedora 198.1 KiB libpsl aarch64 0.21.5-4.fc41 fedora 196.6 KiB libpwquality aarch64 1.4.5-11.fc41 fedora 1.1 MiB libselinux aarch64 3.7-6.fc42 fedora 265.1 KiB libsemanage aarch64 3.7-3.fc42 fedora 361.6 KiB libsepol aarch64 3.7-3.fc42 fedora 873.9 KiB libsmartcols aarch64 2.40.2-8.fc42 fedora 288.5 KiB libssh aarch64 0.11.1-1.fc42 fedora 649.6 KiB libssh-config noarch 0.11.1-1.fc42 fedora 277.0 B libstdc++ aarch64 14.2.1-4.fc42 fedora 2.8 MiB libtasn1 aarch64 4.19.0-9.fc41 fedora 283.8 KiB libtirpc aarch64 1.3.5-0.fc41 fedora 274.8 KiB libtool-ltdl aarch64 2.4.7-12.fc41 fedora 222.2 KiB libunistring aarch64 1.1-8.fc41 fedora 1.8 MiB libuuid aarch64 2.40.2-8.fc42 fedora 197.5 KiB libverto aarch64 0.3.2-9.fc41 fedora 197.5 KiB libxcrypt aarch64 4.4.36-7.fc41 fedora 399.0 KiB libxml2 aarch64 2.12.8-2.fc41 fedora 2.1 MiB libzstd aarch64 1.5.6-2.fc41 fedora 796.0 KiB lua-libs aarch64 5.4.6-6.fc41 fedora 393.1 KiB lua-srpm-macros noarch 1-14.fc41 fedora 1.3 KiB lz4-libs aarch64 1.10.0-1.fc41 fedora 261.6 KiB mpfr aarch64 4.2.1-5.fc41 fedora 818.9 KiB ncurses-base noarch 6.5-2.20240629.fc41 fedora 326.3 KiB ncurses-libs aarch64 6.5-2.20240629.fc41 fedora 2.2 MiB ocaml-srpm-macros noarch 10-3.fc41 fedora 1.9 KiB openblas-srpm-macros noarch 2-18.fc41 fedora 112.0 B openldap aarch64 2.6.8-5.fc41 fedora 952.3 KiB openssl-libs aarch64 1:3.2.2-8.fc42 fedora 7.2 MiB p11-kit aarch64 0.25.5-3.fc41 fedora 2.6 MiB p11-kit-trust aarch64 0.25.5-3.fc41 fedora 655.6 KiB package-notes-srpm-macros noarch 0.5-12.fc41 fedora 1.6 KiB pam aarch64 1.6.1-6.fc42 fedora 11.0 MiB pam-libs aarch64 1.6.1-6.fc42 fedora 607.3 KiB pcre2 aarch64 10.44-1.fc41.1 fedora 905.5 KiB pcre2-syntax noarch 10.44-1.fc41.1 fedora 251.6 KiB perl-srpm-macros noarch 1-56.fc41 fedora 861.0 B pkgconf aarch64 2.3.0-1.fc42 fedora 240.6 KiB pkgconf-m4 noarch 2.3.0-1.fc42 fedora 14.4 KiB pkgconf-pkg-config aarch64 2.3.0-1.fc42 fedora 990.0 B popt aarch64 1.19-7.fc41 fedora 272.9 KiB publicsuffix-list-dafsa noarch 20240107-4.fc41 fedora 67.5 KiB pyproject-srpm-macros noarch 1.15.1-1.fc42 fedora 1.9 KiB python-srpm-macros noarch 3.13-3.fc41 fedora 51.0 KiB qt5-srpm-macros noarch 5.15.15-1.fc42 fedora 500.0 B qt6-srpm-macros noarch 6.7.2-3.fc41 fedora 456.0 B readline aarch64 8.2-11.fc42 fedora 753.3 KiB rpm aarch64 4.19.94-1.fc42 fedora 3.9 MiB rpm-build-libs aarch64 4.19.94-1.fc42 fedora 262.7 KiB rpm-libs aarch64 4.19.94-1.fc42 fedora 798.0 KiB rpm-sequoia aarch64 1.7.0-2.fc41 fedora 2.3 MiB rust-srpm-macros noarch 26.3-3.fc42 fedora 4.8 KiB setup noarch 2.15.0-5.fc41 fedora 720.7 KiB sqlite-libs aarch64 3.46.0-4.fc41 fedora 1.6 MiB systemd-libs aarch64 256.5-1.fc42 fedora 2.5 MiB util-linux-core aarch64 2.40.2-8.fc42 fedora 6.2 MiB xxhash-libs aarch64 0.8.2-4.fc42 fedora 212.3 KiB xz-libs aarch64 1:5.6.3-1.fc42 fedora 266.3 KiB zig-srpm-macros noarch 1-3.fc41 fedora 1.1 KiB zip aarch64 3.0-41.fc41 fedora 1.1 MiB zlib-ng-compat aarch64 2.1.7-3.fc42 fedora 261.8 KiB zstd aarch64 1.5.6-2.fc41 fedora 1.7 MiB Installing groups: Buildsystem building group Transaction Summary: Installing: 153 packages Total size of inbound packages is 53 MiB. Need to download 0 B. After this operation, 303 MiB extra will be used (install 303 MiB, remove 0 B). [1/1] tar-2:1.35-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] bzip2-0:1.0.8-19.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] redhat-rpm-config-0:296-1.fc42.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/4] rpm-build-0:4.19.94-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [4/4] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/5] unzip-0:6.0-64.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [5/5] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/6] cpio-0:2.15-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [6/6] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/7] which-0:2.21-42.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [7/7] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/8] bash-0:5.2.32-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [8/8] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/9] coreutils-0:9.5-10.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [9/9] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/10] grep-0:3.11-9.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [10/10] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/11] patch-0:2.7.6-25.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [11/11] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/12] sed-0:4.9-3.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [12/12] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/13] shadow-utils-2:4.16.0-4.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [13/13] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/14] util-linux-0:2.40.2-8.fc42.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [14/14] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/15] diffutils-0:3.10-8.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [15/15] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/16] fedora-release-common-0:42-0.3. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [16/16] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/17] findutils-1:4.10.0-4.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [17/17] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/18] gawk-0:5.3.0-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [18/18] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/19] glibc-minimal-langpack-0:2.40.9 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [19/19] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/20] gzip-0:1.13-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [20/20] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/21] info-0:7.1.1-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [21/21] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/22] xz-1:5.6.3-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [22/22] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/23] glibc-0:2.40.9000-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [23/23] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/24] libacl-0:2.3.2-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [24/24] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/25] libselinux-0:3.7-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [25/25] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/26] bzip2-libs-0:1.0.8-19.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [26/26] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/27] ansible-srpm-macros-0:1-16.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [27/27] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/28] build-reproducibility-srpm-macr 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [28/28] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/29] dwz-0:0.15-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [29/29] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/30] efi-srpm-macros-0:5-12.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [30/30] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/31] file-0:5.45-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [31/31] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/32] fonts-srpm-macros-1:2.0.5-17.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [32/32] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/33] forge-srpm-macros-0:0.4.0-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [33/33] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/34] fpc-srpm-macros-0:1.3-13.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [34/34] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/35] ghc-srpm-macros-0:1.9.2-1.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [35/35] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/36] gnat-srpm-macros-0:6-6.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [36/36] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/37] go-srpm-macros-0:3.6.0-3.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [37/37] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/38] kernel-srpm-macros-0:1.0-24.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [38/38] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/39] lua-srpm-macros-0:1-14.fc41.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [39/39] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/40] ocaml-srpm-macros-0:10-3.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [40/40] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/41] openblas-srpm-macros-0:2-18.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [41/41] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/42] package-notes-srpm-macros-0:0.5 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [42/42] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/43] perl-srpm-macros-0:1-56.fc41.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [43/43] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/44] pyproject-srpm-macros-0:1.15.1- 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [44/44] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/45] python-srpm-macros-0:3.13-3.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [45/45] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/46] qt5-srpm-macros-0:5.15.15-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [46/46] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/47] qt6-srpm-macros-0:6.7.2-3.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [47/47] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/48] rpm-0:4.19.94-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [48/48] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/49] rust-srpm-macros-0:26.3-3.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [49/49] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/50] zig-srpm-macros-0:1-3.fc41.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [50/50] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/51] zip-0:3.0-41.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [51/51] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/52] binutils-0:2.43.1-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [52/52] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/53] debugedit-0:5.0-17.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [53/53] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/54] elfutils-0:0.191-8.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [54/54] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/55] elfutils-libelf-0:0.191-8.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [55/55] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/56] libarchive-0:3.7.6-1.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [56/56] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/57] pkgconf-pkg-config-0:2.3.0-1.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [57/57] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/58] popt-0:1.19-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [58/58] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/59] readline-0:8.2-11.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [59/59] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/60] rpm-build-libs-0:4.19.94-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [60/60] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/61] rpm-libs-0:4.19.94-1.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [61/61] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/62] zstd-0:1.5.6-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [62/62] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/63] filesystem-0:3.18-29.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [63/63] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/64] ncurses-libs-0:6.5-2.20240629.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [64/64] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/65] coreutils-common-0:9.5-10.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [65/65] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/66] gmp-1:6.3.0-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [66/66] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/67] libattr-0:2.5.2-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [67/67] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/68] libcap-0:2.70-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [68/68] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/69] openssl-libs-1:3.2.2-8.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [69/69] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/70] systemd-libs-0:256.5-1.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [70/70] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/71] pcre2-0:10.44-1.fc41.1.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [71/71] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/72] ed-0:1.20.2-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [72/72] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/73] audit-libs-0:4.0.2-1.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [73/73] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/74] libeconf-0:0.6.2-3.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [74/74] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/75] libsemanage-0:3.7-3.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [75/75] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/76] libxcrypt-0:4.4.36-7.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [76/76] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/77] pam-libs-0:1.6.1-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [77/77] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/78] setup-0:2.15.0-5.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [78/78] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/79] authselect-libs-0:1.5.0-7.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [79/79] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/80] libblkid-0:2.40.2-8.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [80/80] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/81] libcap-ng-0:0.8.5-3.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [81/81] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/82] libfdisk-0:2.40.2-8.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [82/82] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/83] libmount-0:2.40.2-8.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [83/83] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/84] libsmartcols-0:2.40.2-8.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [84/84] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/85] libuuid-0:2.40.2-8.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [85/85] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/86] pam-0:1.6.1-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [86/86] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/87] util-linux-core-0:2.40.2-8.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [87/87] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/88] zlib-ng-compat-0:2.1.7-3.fc42.a 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [88/88] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/89] fedora-repos-0:42-0.2.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [89/89] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/90] mpfr-0:4.2.1-5.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [90/90] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/91] glibc-common-0:2.40.9000-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [91/91] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/92] xz-libs-1:5.6.3-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [92/92] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/93] glibc-gconv-extra-0:2.40.9000-1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [93/93] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/94] basesystem-0:11-21.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [94/94] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/95] libgcc-0:14.2.1-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [95/95] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/96] libsepol-0:3.7-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [96/96] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/97] add-determinism-0:0.3.6-1.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [97/97] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/98] file-libs-0:5.45-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [98/98] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/99] curl-0:8.10.1-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [99/99] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/100] alternatives-0:1.30-1.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [100/100] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/101] elfutils-debuginfod-client-0: 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [101/101] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/102] jansson-0:2.13.1-10.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [102/102] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/103] libstdc++-0:14.2.1-4.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [103/103] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/104] elfutils-libs-0:0.191-8.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [104/104] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/105] libzstd-0:1.5.6-2.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [105/105] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/106] libxml2-0:2.12.8-2.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [106/106] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/107] lz4-libs-0:1.10.0-1.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [107/107] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/108] pkgconf-0:2.3.0-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [108/108] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/109] pkgconf-m4-0:2.3.0-1.fc42.noa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [109/109] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/110] libgomp-0:14.2.1-4.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [110/110] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/111] lua-libs-0:5.4.6-6.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [111/111] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/112] rpm-sequoia-0:1.7.0-2.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [112/112] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/113] sqlite-libs-0:3.46.0-4.fc41.a 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [113/113] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/114] ncurses-base-0:6.5-2.20240629 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [114/114] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/115] ca-certificates-0:2024.2.69_v 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [115/115] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/116] crypto-policies-0:20240927-1. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [116/116] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/117] pcre2-syntax-0:10.44-1.fc41.1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [117/117] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/118] authselect-0:1.5.0-7.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [118/118] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/119] gdbm-1:1.23-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [119/119] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/120] gdbm-libs-1:1.23-7.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [120/120] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/121] libnsl2-0:2.0.1-2.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [121/121] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/122] libpwquality-0:1.4.5-11.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [122/122] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/123] libtirpc-0:1.3.5-0.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [123/123] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/124] fedora-gpg-keys-0:42-0.2.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [124/124] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/125] fedora-repos-rawhide-0:42-0.2 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [125/125] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/126] elfutils-default-yama-scope-0 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [126/126] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/127] libpkgconf-0:2.3.0-1.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [127/127] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/128] libffi-0:3.4.6-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [128/128] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/129] p11-kit-0:0.25.5-3.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [129/129] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/130] p11-kit-trust-0:0.25.5-3.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [130/130] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/131] cracklib-0:2.9.11-6.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [131/131] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/132] krb5-libs-0:1.21.3-2.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [132/132] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/133] libcom_err-0:1.47.1-3.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [133/133] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/134] libtasn1-0:4.19.0-9.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [134/134] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/135] keyutils-libs-0:1.6.3-4.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [135/135] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/136] libverto-0:0.3.2-9.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [136/136] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/137] fedora-release-0:42-0.3.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [137/137] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/138] gdb-minimal-0:15.1-2.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [138/138] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/139] xxhash-libs-0:0.8.2-4.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [139/139] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/140] fedora-release-identity-basic 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [140/140] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/141] libcurl-0:8.10.1-2.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [141/141] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/142] libbrotli-0:1.1.0-5.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [142/142] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/143] libidn2-0:2.3.7-2.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [143/143] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/144] libnghttp2-0:1.63.0-1.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [144/144] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/145] libpsl-0:0.21.5-4.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [145/145] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/146] libssh-0:0.11.1-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [146/146] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/147] openldap-0:2.6.8-5.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [147/147] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/148] libunistring-0:1.1-8.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [148/148] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/149] publicsuffix-list-dafsa-0:202 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [149/149] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/150] libssh-config-0:0.11.1-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [150/150] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/151] cyrus-sasl-lib-0:2.1.28-27.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [151/151] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/152] libevent-0:2.1.12-14.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [152/152] Total 100% | 0.0 B/s | 0.0 B | 00m00s [ 1/153] libtool-ltdl-0:2.4.7-12.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [153/153] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0x105EF944: UserID : "Fedora (42) " Fingerprint: B0F4950458F69E1150C6C5EDC8AC4916105EF944 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-42-primary The key was successfully imported. Importing PGP key 0xE99D6AD1: UserID : "Fedora (41) " Fingerprint: 466CF2D8B60BC3057AA9453ED0622462E99D6AD1 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-41-primary The key was successfully imported. Importing PGP key 0x31645531: UserID : "Fedora (43) " Fingerprint: C6E7F081CF80E13146676E88829B606631645531 From : file:///usr/share/distribution-gpg-keys/fedora/RPM-GPG-KEY-fedora-43-primary The key was successfully imported. [ 1/155] Verify package files 100% | 708.0 B/s | 153.0 B | 00m00s [ 2/155] Prepare transaction 100% | 2.4 KiB/s | 153.0 B | 00m00s [ 3/155] Installing libgcc-0:14.2.1-4. 100% | 171.8 MiB/s | 351.9 KiB | 00m00s [ 4/155] Installing libssh-config-0:0. 100% | 0.0 B/s | 816.0 B | 00m00s [ 5/155] Installing publicsuffix-list- 100% | 66.7 MiB/s | 68.3 KiB | 00m00s [ 6/155] Installing fedora-release-ide 100% | 929.7 KiB/s | 952.0 B | 00m00s [ 7/155] Installing fedora-gpg-keys-0: 100% | 33.6 MiB/s | 172.2 KiB | 00m00s [ 8/155] Installing fedora-repos-rawhi 100% | 0.0 B/s | 2.4 KiB | 00m00s [ 9/155] Installing fedora-repos-0:42- 100% | 0.0 B/s | 5.7 KiB | 00m00s [ 10/155] Installing fedora-release-com 100% | 23.1 MiB/s | 23.7 KiB | 00m00s [ 11/155] Installing fedora-release-0:4 100% | 0.0 B/s | 124.0 B | 00m00s [ 12/155] Installing setup-0:2.15.0-5.f 100% | 41.7 MiB/s | 726.1 KiB | 00m00s [ 13/155] Installing filesystem-0:3.18- 100% | 2.2 MiB/s | 212.6 KiB | 00m00s [ 14/155] Installing basesystem-0:11-21 100% | 0.0 B/s | 124.0 B | 00m00s [ 15/155] Installing pcre2-syntax-0:10. 100% | 124.1 MiB/s | 254.1 KiB | 00m00s [ 16/155] Installing ncurses-base-0:6.5 100% | 49.1 MiB/s | 351.7 KiB | 00m00s [ 17/155] Installing glibc-minimal-lang 100% | 0.0 B/s | 124.0 B | 00m00s [ 18/155] Installing ncurses-libs-0:6.5 100% | 281.1 MiB/s | 2.2 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 19/155] Installing glibc-0:2.40.9000- 100% | 243.8 MiB/s | 9.3 MiB | 00m00s [ 20/155] Installing bash-0:5.2.32-2.fc 100% | 296.9 MiB/s | 8.3 MiB | 00m00s [ 21/155] Installing glibc-common-0:2.4 100% | 285.6 MiB/s | 2.6 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [ 22/155] Installing glibc-gconv-extra- 100% | 535.4 MiB/s | 49.3 MiB | 00m00s [ 23/155] Installing zlib-ng-compat-0:2 100% | 128.2 MiB/s | 262.6 KiB | 00m00s [ 24/155] Installing bzip2-libs-0:1.0.8 100% | 197.1 MiB/s | 201.9 KiB | 00m00s [ 25/155] Installing xz-libs-1:5.6.3-1. 100% | 130.6 MiB/s | 267.5 KiB | 00m00s [ 26/155] Installing popt-0:1.19-7.fc41 100% | 68.2 MiB/s | 279.5 KiB | 00m00s [ 27/155] Installing readline-0:8.2-11. 100% | 245.9 MiB/s | 755.5 KiB | 00m00s [ 28/155] Installing libuuid-0:2.40.2-8 100% | 194.0 MiB/s | 198.6 KiB | 00m00s [ 29/155] Installing libblkid-0:2.40.2- 100% | 204.9 MiB/s | 419.7 KiB | 00m00s [ 30/155] Installing gmp-1:6.3.0-2.fc41 100% | 235.8 MiB/s | 724.2 KiB | 00m00s [ 31/155] Installing libattr-0:2.5.2-4. 100% | 192.9 MiB/s | 197.5 KiB | 00m00s [ 32/155] Installing libacl-0:2.3.2-2.f 100% | 192.3 MiB/s | 196.9 KiB | 00m00s [ 33/155] Installing libxcrypt-0:4.4.36 100% | 196.1 MiB/s | 401.7 KiB | 00m00s [ 34/155] Installing libstdc++-0:14.2.1 100% | 277.4 MiB/s | 2.8 MiB | 00m00s [ 35/155] Installing libzstd-0:1.5.6-2. 100% | 259.5 MiB/s | 797.3 KiB | 00m00s [ 36/155] Installing elfutils-libelf-0: 100% | 328.5 MiB/s | 1.3 MiB | 00m00s [ 37/155] Installing libeconf-0:0.6.2-3 100% | 202.9 MiB/s | 207.8 KiB | 00m00s [ 38/155] Installing gdbm-libs-1:1.23-7 100% | 208.8 MiB/s | 427.7 KiB | 00m00s [ 39/155] Installing dwz-0:0.15-7.fc41. 100% | 189.5 MiB/s | 388.1 KiB | 00m00s [ 40/155] Installing mpfr-0:4.2.1-5.fc4 100% | 200.3 MiB/s | 820.5 KiB | 00m00s [ 41/155] Installing gawk-0:5.3.0-4.fc4 100% | 355.3 MiB/s | 4.3 MiB | 00m00s [ 42/155] Installing unzip-0:6.0-64.fc4 100% | 237.7 MiB/s | 730.2 KiB | 00m00s [ 43/155] Installing file-libs-0:5.45-7 100% | 527.6 MiB/s | 10.0 MiB | 00m00s [ 44/155] Installing file-0:5.45-7.fc41 100% | 32.8 MiB/s | 269.0 KiB | 00m00s [ 45/155] Installing crypto-policies-0: 100% | 19.9 MiB/s | 163.2 KiB | 00m00s [ 46/155] Installing pcre2-0:10.44-1.fc 100% | 295.2 MiB/s | 906.9 KiB | 00m00s [ 47/155] Installing grep-0:3.11-9.fc41 100% | 137.1 MiB/s | 1.1 MiB | 00m00s [ 48/155] Installing xz-1:5.6.3-1.fc42. 100% | 188.8 MiB/s | 1.5 MiB | 00m00s [ 49/155] Installing libcap-ng-0:0.8.5- 100% | 204.6 MiB/s | 419.1 KiB | 00m00s [ 50/155] Installing audit-libs-0:4.0.2 100% | 268.3 MiB/s | 549.6 KiB | 00m00s [ 51/155] Installing pam-libs-0:1.6.1-6 100% | 297.6 MiB/s | 609.5 KiB | 00m00s [ 52/155] Installing libcap-0:2.70-4.fc 100% | 344.0 MiB/s | 1.4 MiB | 00m00s [ 53/155] Installing systemd-libs-0:256 100% | 315.1 MiB/s | 2.5 MiB | 00m00s [ 54/155] Installing libsmartcols-0:2.4 100% | 141.4 MiB/s | 289.7 KiB | 00m00s [ 55/155] Installing libsepol-0:3.7-3.f 100% | 284.8 MiB/s | 874.9 KiB | 00m00s [ 56/155] Installing libselinux-0:3.7-6 100% | 130.0 MiB/s | 266.3 KiB | 00m00s [ 57/155] Installing sed-0:4.9-3.fc41.a 100% | 164.3 MiB/s | 1.0 MiB | 00m00s [ 58/155] Installing findutils-1:4.10.0 100% | 234.2 MiB/s | 2.1 MiB | 00m00s [ 59/155] Installing libmount-0:2.40.2- 100% | 236.8 MiB/s | 485.1 KiB | 00m00s [ 60/155] Installing alternatives-0:1.3 100% | 214.7 MiB/s | 219.9 KiB | 00m00s [ 61/155] Installing lz4-libs-0:1.10.0- 100% | 256.5 MiB/s | 262.7 KiB | 00m00s [ 62/155] Installing lua-libs-0:5.4.6-6 100% | 192.5 MiB/s | 394.3 KiB | 00m00s [ 63/155] Installing libffi-0:3.4.6-3.f 100% | 277.2 MiB/s | 283.8 KiB | 00m00s [ 64/155] Installing libcom_err-0:1.47. 100% | 234.8 MiB/s | 240.4 KiB | 00m00s [ 65/155] Installing libtasn1-0:4.19.0- 100% | 139.4 MiB/s | 285.6 KiB | 00m00s [ 66/155] Installing p11-kit-0:0.25.5-3 100% | 203.6 MiB/s | 2.6 MiB | 00m00s [ 67/155] Installing libunistring-0:1.1 100% | 301.5 MiB/s | 1.8 MiB | 00m00s [ 68/155] Installing libidn2-0:2.3.7-2. 100% | 113.1 MiB/s | 463.1 KiB | 00m00s [ 69/155] Installing libpsl-0:0.21.5-4. 100% | 193.1 MiB/s | 197.7 KiB | 00m00s [ 70/155] Installing p11-kit-trust-0:0. 100% | 64.2 MiB/s | 657.4 KiB | 00m00s [ 71/155] Installing zstd-0:1.5.6-2.fc4 100% | 241.6 MiB/s | 1.7 MiB | 00m00s [ 72/155] Installing util-linux-core-0: 100% | 387.7 MiB/s | 6.2 MiB | 00m00s [ 73/155] Installing tar-2:1.35-4.fc41. 100% | 255.6 MiB/s | 3.1 MiB | 00m00s [ 74/155] Installing libsemanage-0:3.7- 100% | 118.3 MiB/s | 363.3 KiB | 00m00s [ 75/155] Installing shadow-utils-2:4.1 100% | 244.9 MiB/s | 7.3 MiB | 00m00s [ 76/155] Installing zip-0:3.0-41.fc41. 100% | 281.0 MiB/s | 1.1 MiB | 00m00s [ 77/155] Installing gdbm-1:1.23-7.fc41 100% | 227.9 MiB/s | 933.4 KiB | 00m00s [ 78/155] Installing cyrus-sasl-lib-0:2 100% | 345.2 MiB/s | 3.1 MiB | 00m00s [ 79/155] Installing libfdisk-0:2.40.2- 100% | 236.3 MiB/s | 483.9 KiB | 00m00s [ 80/155] Installing libxml2-0:2.12.8-2 100% | 306.0 MiB/s | 2.1 MiB | 00m00s [ 81/155] Installing bzip2-0:1.0.8-19.f 100% | 211.0 MiB/s | 432.2 KiB | 00m00s [ 82/155] Installing add-determinism-0: 100% | 290.5 MiB/s | 2.0 MiB | 00m00s [ 83/155] Installing build-reproducibil 100% | 0.0 B/s | 1.0 KiB | 00m00s [ 84/155] Installing sqlite-libs-0:3.46 100% | 259.8 MiB/s | 1.6 MiB | 00m00s [ 85/155] Installing ed-0:1.20.2-2.fc41 100% | 139.2 MiB/s | 285.1 KiB | 00m00s [ 86/155] Installing patch-0:2.7.6-25.f 100% | 191.5 MiB/s | 392.1 KiB | 00m00s [ 87/155] Installing elfutils-default-y 100% | 291.9 KiB/s | 2.0 KiB | 00m00s [ 88/155] Installing elfutils-libs-0:0. 100% | 229.5 MiB/s | 940.2 KiB | 00m00s [ 89/155] Installing cpio-0:2.15-2.fc41 100% | 203.4 MiB/s | 1.2 MiB | 00m00s [ 90/155] Installing diffutils-0:3.10-8 100% | 234.4 MiB/s | 2.1 MiB | 00m00s [ 91/155] Installing jansson-0:2.13.1-1 100% | 216.7 MiB/s | 221.9 KiB | 00m00s [ 92/155] Installing libgomp-0:14.2.1-4 100% | 277.7 MiB/s | 568.7 KiB | 00m00s [ 93/155] Installing libpkgconf-0:2.3.0 100% | 194.6 MiB/s | 199.2 KiB | 00m00s [ 94/155] Installing pkgconf-0:2.3.0-1. 100% | 118.7 MiB/s | 243.1 KiB | 00m00s [ 95/155] Installing keyutils-libs-0:1. 100% | 222.5 MiB/s | 227.9 KiB | 00m00s [ 96/155] Installing libverto-0:0.3.2-9 100% | 194.7 MiB/s | 199.3 KiB | 00m00s [ 97/155] Installing xxhash-libs-0:0.8. 100% | 208.7 MiB/s | 213.7 KiB | 00m00s [ 98/155] Installing libbrotli-0:1.1.0- 100% | 285.2 MiB/s | 1.1 MiB | 00m00s [ 99/155] Installing libnghttp2-0:1.63. 100% | 257.2 MiB/s | 263.3 KiB | 00m00s [100/155] Installing libtool-ltdl-0:2.4 100% | 218.1 MiB/s | 223.4 KiB | 00m00s [101/155] Installing pkgconf-m4-0:2.3.0 100% | 0.0 B/s | 14.8 KiB | 00m00s [102/155] Installing pkgconf-pkg-config 100% | 1.7 MiB/s | 1.8 KiB | 00m00s [103/155] Installing coreutils-common-0 100% | 294.5 MiB/s | 11.2 MiB | 00m00s [104/155] Installing openssl-libs-1:3.2 100% | 313.5 MiB/s | 7.2 MiB | 00m00s [105/155] Installing coreutils-0:9.5-10 100% | 442.6 MiB/s | 20.8 MiB | 00m00s [106/155] Installing ca-certificates-0: 100% | 1.4 MiB/s | 2.4 MiB | 00m02s [107/155] Installing krb5-libs-0:1.21.3 100% | 257.4 MiB/s | 3.3 MiB | 00m00s [108/155] Installing libarchive-0:3.7.6 100% | 238.5 MiB/s | 976.8 KiB | 00m00s [109/155] Installing libtirpc-0:1.3.5-0 100% | 135.0 MiB/s | 276.5 KiB | 00m00s [110/155] Installing gzip-0:1.13-2.fc41 100% | 120.7 MiB/s | 494.4 KiB | 00m00s [111/155] Installing authselect-libs-0: 100% | 132.1 MiB/s | 946.8 KiB | 00m00s [112/155] Installing cracklib-0:2.9.11- 100% | 154.0 MiB/s | 946.3 KiB | 00m00s [113/155] Installing libpwquality-0:1.4 100% | 158.2 MiB/s | 1.1 MiB | 00m00s [114/155] Installing libnsl2-0:2.0.1-2. 100% | 109.0 MiB/s | 223.2 KiB | 00m00s [115/155] Installing pam-0:1.6.1-6.fc42 100% | 356.1 MiB/s | 11.0 MiB | 00m00s [116/155] Installing libssh-0:0.11.1-1. 100% | 212.1 MiB/s | 651.7 KiB | 00m00s [117/155] Installing rpm-sequoia-0:1.7. 100% | 287.1 MiB/s | 2.3 MiB | 00m00s [118/155] Installing rpm-libs-0:4.19.94 100% | 260.3 MiB/s | 799.5 KiB | 00m00s [119/155] Installing rpm-build-libs-0:4 100% | 257.4 MiB/s | 263.6 KiB | 00m00s [120/155] Installing libevent-0:2.1.12- 100% | 304.7 MiB/s | 1.5 MiB | 00m00s [121/155] Installing openldap-0:2.6.8-5 100% | 233.4 MiB/s | 956.1 KiB | 00m00s [122/155] Installing libcurl-0:8.10.1-2 100% | 279.8 MiB/s | 859.5 KiB | 00m00s [123/155] Installing elfutils-debuginfo 100% | 194.8 MiB/s | 398.9 KiB | 00m00s [124/155] Installing binutils-0:2.43.1- 100% | 340.2 MiB/s | 33.0 MiB | 00m00s [125/155] Installing elfutils-0:0.191-8 100% | 353.9 MiB/s | 5.0 MiB | 00m00s [126/155] Installing gdb-minimal-0:15.1 100% | 316.6 MiB/s | 13.0 MiB | 00m00s [127/155] Installing debugedit-0:5.0-17 100% | 245.1 MiB/s | 502.0 KiB | 00m00s [128/155] Installing curl-0:8.10.1-2.fc 100% | 47.5 MiB/s | 583.8 KiB | 00m00s [129/155] Installing rpm-0:4.19.94-1.fc 100% | 146.0 MiB/s | 3.4 MiB | 00m00s [130/155] Installing efi-srpm-macros-0: 100% | 40.2 MiB/s | 41.2 KiB | 00m00s [131/155] Installing lua-srpm-macros-0: 100% | 0.0 B/s | 1.9 KiB | 00m00s [132/155] Installing zig-srpm-macros-0: 100% | 0.0 B/s | 1.7 KiB | 00m00s [133/155] Installing rust-srpm-macros-0 100% | 0.0 B/s | 5.6 KiB | 00m00s [134/155] Installing qt6-srpm-macros-0: 100% | 0.0 B/s | 732.0 B | 00m00s [135/155] Installing qt5-srpm-macros-0: 100% | 757.8 KiB/s | 776.0 B | 00m00s [136/155] Installing perl-srpm-macros-0 100% | 0.0 B/s | 1.1 KiB | 00m00s [137/155] Installing package-notes-srpm 100% | 0.0 B/s | 2.0 KiB | 00m00s [138/155] Installing openblas-srpm-macr 100% | 0.0 B/s | 392.0 B | 00m00s [139/155] Installing ocaml-srpm-macros- 100% | 0.0 B/s | 2.2 KiB | 00m00s [140/155] Installing kernel-srpm-macros 100% | 0.0 B/s | 2.3 KiB | 00m00s [141/155] Installing gnat-srpm-macros-0 100% | 0.0 B/s | 1.3 KiB | 00m00s [142/155] Installing ghc-srpm-macros-0: 100% | 0.0 B/s | 1.0 KiB | 00m00s [143/155] Installing fpc-srpm-macros-0: 100% | 0.0 B/s | 420.0 B | 00m00s [144/155] Installing ansible-srpm-macro 100% | 0.0 B/s | 36.2 KiB | 00m00s [145/155] Installing fonts-srpm-macros- 100% | 55.7 MiB/s | 57.0 KiB | 00m00s [146/155] Installing forge-srpm-macros- 100% | 39.3 MiB/s | 40.3 KiB | 00m00s [147/155] Installing go-srpm-macros-0:3 100% | 60.5 MiB/s | 62.0 KiB | 00m00s [148/155] Installing python-srpm-macros 100% | 50.9 MiB/s | 52.2 KiB | 00m00s [149/155] Installing redhat-rpm-config- 100% | 62.9 MiB/s | 193.2 KiB | 00m00s [150/155] Installing rpm-build-0:4.19.9 100% | 349.3 MiB/s | 1.4 MiB | 00m00s [151/155] Installing pyproject-srpm-mac 100% | 1.2 MiB/s | 2.5 KiB | 00m00s [152/155] Installing util-linux-0:2.40. 100% | 360.7 MiB/s | 17.0 MiB | 00m00s [153/155] Installing authselect-0:1.5.0 100% | 102.2 MiB/s | 313.9 KiB | 00m00s [154/155] Installing which-0:2.21-42.fc 100% | 244.5 MiB/s | 250.4 KiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [155/155] Installing info-0:7.1.1-1.fc4 100% | 268.3 KiB/s | 614.1 KiB | 00m02s Complete! Finish: installing minimal buildroot with dnf5 Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: add-determinism-0.3.6-1.fc41.aarch64 alternatives-1.30-1.fc41.aarch64 ansible-srpm-macros-1-16.fc41.noarch audit-libs-4.0.2-1.fc41.aarch64 authselect-1.5.0-7.fc41.aarch64 authselect-libs-1.5.0-7.fc41.aarch64 basesystem-11-21.fc41.noarch bash-5.2.32-2.fc42.aarch64 binutils-2.43.1-1.fc42.aarch64 build-reproducibility-srpm-macros-0.3.6-1.fc41.noarch bzip2-1.0.8-19.fc41.aarch64 bzip2-libs-1.0.8-19.fc41.aarch64 ca-certificates-2024.2.69_v8.0.401-2.fc42.noarch coreutils-9.5-10.fc42.aarch64 coreutils-common-9.5-10.fc42.aarch64 cpio-2.15-2.fc41.aarch64 cracklib-2.9.11-6.fc41.aarch64 crypto-policies-20240927-1.git93b7251.fc42.noarch curl-8.10.1-2.fc42.aarch64 cyrus-sasl-lib-2.1.28-27.fc41.aarch64 debugedit-5.0-17.fc41.aarch64 diffutils-3.10-8.fc41.aarch64 dwz-0.15-7.fc41.aarch64 ed-1.20.2-2.fc41.aarch64 efi-srpm-macros-5-12.fc41.noarch elfutils-0.191-8.fc41.aarch64 elfutils-debuginfod-client-0.191-8.fc41.aarch64 elfutils-default-yama-scope-0.191-8.fc41.noarch elfutils-libelf-0.191-8.fc41.aarch64 elfutils-libs-0.191-8.fc41.aarch64 fedora-gpg-keys-42-0.2.noarch fedora-release-42-0.3.noarch fedora-release-common-42-0.3.noarch fedora-release-identity-basic-42-0.3.noarch fedora-repos-42-0.2.noarch fedora-repos-rawhide-42-0.2.noarch file-5.45-7.fc41.aarch64 file-libs-5.45-7.fc41.aarch64 filesystem-3.18-29.fc42.aarch64 findutils-4.10.0-4.fc41.aarch64 fonts-srpm-macros-2.0.5-17.fc41.noarch forge-srpm-macros-0.4.0-1.fc42.noarch fpc-srpm-macros-1.3-13.fc41.noarch gawk-5.3.0-4.fc41.aarch64 gdb-minimal-15.1-2.fc42.aarch64 gdbm-1.23-7.fc41.aarch64 gdbm-libs-1.23-7.fc41.aarch64 ghc-srpm-macros-1.9.2-1.fc42.noarch glibc-2.40.9000-1.fc42.aarch64 glibc-common-2.40.9000-1.fc42.aarch64 glibc-gconv-extra-2.40.9000-1.fc42.aarch64 glibc-minimal-langpack-2.40.9000-1.fc42.aarch64 gmp-6.3.0-2.fc41.aarch64 gnat-srpm-macros-6-6.fc41.noarch go-srpm-macros-3.6.0-3.fc41.noarch gpg-pubkey-105ef944-65ca83d1 gpg-pubkey-31645531-66b6dccf gpg-pubkey-e99d6ad1-64d2612c grep-3.11-9.fc41.aarch64 gzip-1.13-2.fc41.aarch64 info-7.1.1-1.fc42.aarch64 jansson-2.13.1-10.fc41.aarch64 kernel-srpm-macros-1.0-24.fc41.noarch keyutils-libs-1.6.3-4.fc41.aarch64 krb5-libs-1.21.3-2.fc41.aarch64 libacl-2.3.2-2.fc41.aarch64 libarchive-3.7.6-1.fc42.aarch64 libattr-2.5.2-4.fc41.aarch64 libblkid-2.40.2-8.fc42.aarch64 libbrotli-1.1.0-5.fc41.aarch64 libcap-2.70-4.fc41.aarch64 libcap-ng-0.8.5-3.fc41.aarch64 libcom_err-1.47.1-3.fc41.aarch64 libcurl-8.10.1-2.fc42.aarch64 libeconf-0.6.2-3.fc41.aarch64 libevent-2.1.12-14.fc41.aarch64 libfdisk-2.40.2-8.fc42.aarch64 libffi-3.4.6-3.fc42.aarch64 libgcc-14.2.1-4.fc42.aarch64 libgomp-14.2.1-4.fc42.aarch64 libidn2-2.3.7-2.fc41.aarch64 libmount-2.40.2-8.fc42.aarch64 libnghttp2-1.63.0-1.fc42.aarch64 libnsl2-2.0.1-2.fc41.aarch64 libpkgconf-2.3.0-1.fc42.aarch64 libpsl-0.21.5-4.fc41.aarch64 libpwquality-1.4.5-11.fc41.aarch64 libselinux-3.7-6.fc42.aarch64 libsemanage-3.7-3.fc42.aarch64 libsepol-3.7-3.fc42.aarch64 libsmartcols-2.40.2-8.fc42.aarch64 libssh-0.11.1-1.fc42.aarch64 libssh-config-0.11.1-1.fc42.noarch libstdc++-14.2.1-4.fc42.aarch64 libtasn1-4.19.0-9.fc41.aarch64 libtirpc-1.3.5-0.fc41.aarch64 libtool-ltdl-2.4.7-12.fc41.aarch64 libunistring-1.1-8.fc41.aarch64 libuuid-2.40.2-8.fc42.aarch64 libverto-0.3.2-9.fc41.aarch64 libxcrypt-4.4.36-7.fc41.aarch64 libxml2-2.12.8-2.fc41.aarch64 libzstd-1.5.6-2.fc41.aarch64 lua-libs-5.4.6-6.fc41.aarch64 lua-srpm-macros-1-14.fc41.noarch lz4-libs-1.10.0-1.fc41.aarch64 mpfr-4.2.1-5.fc41.aarch64 ncurses-base-6.5-2.20240629.fc41.noarch ncurses-libs-6.5-2.20240629.fc41.aarch64 ocaml-srpm-macros-10-3.fc41.noarch openblas-srpm-macros-2-18.fc41.noarch openldap-2.6.8-5.fc41.aarch64 openssl-libs-3.2.2-8.fc42.aarch64 p11-kit-0.25.5-3.fc41.aarch64 p11-kit-trust-0.25.5-3.fc41.aarch64 package-notes-srpm-macros-0.5-12.fc41.noarch pam-1.6.1-6.fc42.aarch64 pam-libs-1.6.1-6.fc42.aarch64 patch-2.7.6-25.fc41.aarch64 pcre2-10.44-1.fc41.1.aarch64 pcre2-syntax-10.44-1.fc41.1.noarch perl-srpm-macros-1-56.fc41.noarch pkgconf-2.3.0-1.fc42.aarch64 pkgconf-m4-2.3.0-1.fc42.noarch pkgconf-pkg-config-2.3.0-1.fc42.aarch64 popt-1.19-7.fc41.aarch64 publicsuffix-list-dafsa-20240107-4.fc41.noarch pyproject-srpm-macros-1.15.1-1.fc42.noarch python-srpm-macros-3.13-3.fc41.noarch qt5-srpm-macros-5.15.15-1.fc42.noarch qt6-srpm-macros-6.7.2-3.fc41.noarch readline-8.2-11.fc42.aarch64 redhat-rpm-config-296-1.fc42.noarch rpm-4.19.94-1.fc42.aarch64 rpm-build-4.19.94-1.fc42.aarch64 rpm-build-libs-4.19.94-1.fc42.aarch64 rpm-libs-4.19.94-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 rust-srpm-macros-26.3-3.fc42.noarch sed-4.9-3.fc41.aarch64 setup-2.15.0-5.fc41.noarch shadow-utils-4.16.0-4.fc42.aarch64 sqlite-libs-3.46.0-4.fc41.aarch64 systemd-libs-256.5-1.fc42.aarch64 tar-1.35-4.fc41.aarch64 unzip-6.0-64.fc41.aarch64 util-linux-2.40.2-8.fc42.aarch64 util-linux-core-2.40.2-8.fc42.aarch64 which-2.21-42.fc41.aarch64 xxhash-libs-0.8.2-4.fc42.aarch64 xz-5.6.3-1.fc42.aarch64 xz-libs-5.6.3-1.fc42.aarch64 zig-srpm-macros-1-3.fc41.noarch zip-3.0-41.fc41.aarch64 zlib-ng-compat-2.1.7-3.fc42.aarch64 zstd-1.5.6-2.fc41.aarch64 Start: buildsrpm Start: rpmbuild -bs Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721174400 Wrote: /builddir/build/SRPMS/ProDy-2.4.1-5.fc42.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1728337787.657920/root/var/log/dnf5.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-4cp0usn2/ProDy/ProDy.spec) Config(child) 0 minutes 17 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/ProDy-2.4.1-5.fc42.src.rpm) Config(fedora-rawhide-aarch64) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728337787.657920/root. INFO: reusing tmpfs at /var/lib/mock/fedora-rawhide-aarch64-bootstrap-1728337787.657920/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-rawhide-aarch64-1728337787.657920/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.94-1.fc42.aarch64 rpm-sequoia-1.7.0-2.fc41.aarch64 dnf5-5.2.6.2-1.fc42.aarch64 dnf5-plugins-5.2.6.2-1.fc42.aarch64 Finish: chroot init Start: build phase for ProDy-2.4.1-5.fc42.src.rpm Start: build setup for ProDy-2.4.1-5.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721174400 Wrote: /builddir/build/SRPMS/ProDy-2.4.1-5.fc42.src.rpm Updating and loading repositories: fedora 100% | 37.3 KiB/s | 7.8 KiB | 00m00s Copr repository 100% | 102.0 KiB/s | 1.5 KiB | 00m00s Repositories loaded. Package Arch Version Repository Size Installing: gcc aarch64 14.2.1-4.fc42 fedora 93.8 MiB gcc-c++ aarch64 14.2.1-4.fc42 fedora 35.0 MiB python3-biopython aarch64 1.84-3.fc42 copr_base 31.8 MiB python3-devel aarch64 3.13.0~rc3-1.fc42 fedora 1.8 MiB python3-matplotlib aarch64 3.9.1-2.fc41 fedora 21.8 MiB python3-nose noarch 1.3.7-59.fc41 fedora 1.2 MiB python3-numpy aarch64 1:1.26.4-8.fc41 fedora 41.2 MiB python3-scipy aarch64 1.11.3-15.fc41 fedora 71.6 MiB python3-setuptools noarch 69.2.0-8.fc41 fedora 7.2 MiB python3-urllib3 noarch 2.2.3-3.fc42 fedora 1.0 MiB Installing dependencies: abattis-cantarell-vf-fonts noarch 0.301-13.fc41 fedora 192.7 KiB annobin-docs noarch 12.70-1.fc42 fedora 97.7 KiB annobin-plugin-gcc aarch64 12.70-1.fc42 fedora 1.1 MiB cairo aarch64 1.18.0-4.fc41 fedora 1.9 MiB cpp aarch64 14.2.1-4.fc42 fedora 31.8 MiB default-fonts-core-sans noarch 4.1-3.fc42 fedora 11.9 KiB dejavu-sans-fonts noarch 2.37-24.fc41 fedora 5.5 MiB expat aarch64 2.6.3-1.fc42 fedora 539.6 KiB flex aarch64 2.6.4-18.fc41 fedora 881.3 KiB flexiblas aarch64 3.4.4-3.fc41 fedora 48.5 KiB flexiblas-netlib aarch64 3.4.4-3.fc41 fedora 9.8 MiB flexiblas-openblas-openmp aarch64 3.4.4-3.fc41 fedora 195.4 KiB fontconfig aarch64 2.15.0-8.fc41 fedora 2.4 MiB fonts-filesystem noarch 1:2.0.5-17.fc41 fedora 0.0 B freetype aarch64 2.13.2-6.fc41 fedora 943.1 KiB fribidi aarch64 1.0.16-1.fc42 fedora 502.6 KiB gcc-plugin-annobin aarch64 14.2.1-4.fc42 fedora 197.1 KiB glib2 aarch64 2.82.1-2.fc42 fedora 16.6 MiB glibc-devel aarch64 2.40.9000-1.fc42 fedora 2.2 MiB gnutls aarch64 3.8.7-4.fc42 fedora 3.4 MiB google-noto-fonts-common noarch 20240901-1.fc42 fedora 17.5 KiB google-noto-sans-vf-fonts noarch 20240901-1.fc42 fedora 1.2 MiB graphite2 aarch64 1.3.14-16.fc41 fedora 495.9 KiB harfbuzz aarch64 10.0.1-1.fc42 fedora 2.8 MiB jbigkit-libs aarch64 2.1-30.fc41 fedora 437.7 KiB kernel-headers aarch64 6.11.0-63.fc42 fedora 6.3 MiB lcms2 aarch64 2.16-4.fc41 fedora 484.9 KiB libX11 aarch64 1.8.10-2.fc42 fedora 1.3 MiB libX11-common noarch 1.8.10-2.fc42 fedora 1.1 MiB libXau aarch64 1.0.11-7.fc41 fedora 242.9 KiB libXext aarch64 1.3.6-2.fc41 fedora 210.0 KiB libXft aarch64 2.3.8-7.fc41 fedora 256.5 KiB libXrender aarch64 0.9.11-7.fc41 fedora 198.2 KiB libasan aarch64 14.2.1-4.fc42 fedora 1.6 MiB libatomic aarch64 14.2.1-4.fc42 fedora 196.9 KiB libb2 aarch64 0.98.1-12.fc41 fedora 202.2 KiB libgfortran aarch64 14.2.1-4.fc42 fedora 1.5 MiB libimagequant aarch64 4.0.3-5.fc41 fedora 667.1 KiB libjpeg-turbo aarch64 3.0.4-1.fc42 fedora 796.8 KiB liblerc aarch64 4.0.0-7.fc41 fedora 610.5 KiB libmpc aarch64 1.3.1-6.fc41 fedora 280.8 KiB libpng aarch64 2:1.6.44-1.fc42 fedora 333.9 KiB libqhull_r aarch64 1:8.0.2-5.fc41 fedora 583.5 KiB libraqm aarch64 0.10.1-1.fc42 fedora 196.8 KiB libstdc++-devel aarch64 14.2.1-4.fc42 fedora 15.1 MiB libtiff aarch64 4.6.0-6.fc42 fedora 850.2 KiB libubsan aarch64 14.2.1-4.fc42 fedora 539.3 KiB libwebp aarch64 1.4.0-4.fc41 fedora 1.2 MiB libxcb aarch64 1.17.0-3.fc42 fedora 5.0 MiB libxcrypt-devel aarch64 4.4.36-7.fc41 fedora 30.3 KiB libxslt aarch64 1.1.42-2.fc41 fedora 867.2 KiB m4 aarch64 1.4.19-10.fc41 fedora 668.7 KiB make aarch64 1:4.4.1-9.fc42 fedora 1.8 MiB mpdecimal aarch64 2.5.1-16.fc41 fedora 328.9 KiB nettle aarch64 3.10-3.fc41 fedora 956.7 KiB openblas aarch64 0.3.26-5.fc41 fedora 96.0 KiB openblas-openmp aarch64 0.3.26-5.fc41 fedora 19.5 MiB openjpeg aarch64 2.5.2-4.fc42 fedora 537.7 KiB pixman aarch64 0.43.4-2.fc41 fedora 718.4 KiB pyproject-rpm-macros noarch 1.15.1-1.fc42 fedora 109.2 KiB python-pip-wheel noarch 24.2-2.fc42 fedora 1.2 MiB python-rpm-macros noarch 3.13-3.fc41 fedora 22.1 KiB python3 aarch64 3.13.0~rc3-1.fc42 fedora 211.8 KiB python3-appdirs noarch 1.4.4-24.fc42 fedora 68.7 KiB python3-brotli aarch64 1.1.0-5.fc41 fedora 912.1 KiB python3-cairo aarch64 1.25.1-5.fc41 fedora 584.5 KiB python3-charset-normalizer noarch 3.3.2-5.fc41 fedora 314.8 KiB python3-contourpy aarch64 1.3.0-1.fc42 copr_base 890.1 KiB python3-cycler noarch 0.11.0-13.fc41 fedora 37.6 KiB python3-dateutil noarch 1:2.8.2-16.fc41 fedora 879.2 KiB python3-fonttools aarch64 4.54.1-1.fc42 fedora 18.8 MiB python3-fs noarch 2.4.16-9.fc41 fedora 1.3 MiB python3-idna noarch 3.9-1.fc42 fedora 639.8 KiB python3-kiwisolver aarch64 1.4.7-1.fc42 fedora 289.4 KiB python3-libs aarch64 3.13.0~rc3-1.fc42 fedora 49.7 MiB python3-lxml aarch64 5.3.0-1.fc42 copr_base 5.3 MiB python3-matplotlib-data noarch 3.9.1-2.fc41 fedora 741.5 KiB python3-matplotlib-data-fonts noarch 3.9.1-2.fc41 fedora 7.9 MiB python3-matplotlib-tk aarch64 3.9.1-2.fc41 fedora 366.1 KiB python3-numpy-f2py aarch64 1:1.26.4-8.fc41 fedora 2.8 MiB python3-olefile noarch 0.47-5.fc41 fedora 340.4 KiB python3-packaging noarch 24.1-2.fc41 fedora 422.3 KiB python3-pillow aarch64 10.4.0-2.fc41 fedora 4.6 MiB python3-pillow-tk aarch64 10.4.0-2.fc41 fedora 248.4 KiB python3-platformdirs noarch 4.2.2-2.fc41 fedora 168.6 KiB python3-pooch noarch 1.8.2-3.fc41 fedora 625.5 KiB python3-pyparsing noarch 3.1.2-7.fc41 fedora 1.0 MiB python3-requests noarch 2.32.3-3.fc41 fedora 485.9 KiB python3-rpm-generators noarch 14-11.fc41 fedora 81.7 KiB python3-rpm-macros noarch 3.13-3.fc41 fedora 6.4 KiB python3-six noarch 1.16.0-23.fc41 fedora 118.3 KiB python3-tkinter aarch64 3.13.0~rc3-1.fc42 fedora 2.1 MiB tcl aarch64 1:8.6.14-2.fc41 fedora 4.5 MiB tk aarch64 1:8.6.14-2.fc41 fedora 3.9 MiB tzdata noarch 2024a-9.fc41 fedora 1.7 MiB xml-common noarch 0.6.3-65.fc41 fedora 78.4 KiB Transaction Summary: Installing: 106 packages Total size of inbound packages is 152 MiB. Need to download 21 MiB. After this operation, 568 MiB extra will be used (install 568 MiB, remove 0 B). [1/1] gcc-0:14.2.1-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [1/1] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/2] gcc-c++-0:14.2.1-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [2/2] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/3] python3-devel-0:3.13.0~rc3-1.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded -------------------------------------------------------------------------------- [3/3] Total 100% | 0.0 B/s | 0.0 B | 00m00s [1/6] python3-numpy-1:1.26.4-8.fc41.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [2/7] python3-scipy-0:1.11.3-15.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [3/8] python3-setuptools-0:69.2.0-8.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [4/9] python3-urllib3-0:2.2.3-3.fc42.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 5/11] cpp-0:14.2.1-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 6/12] glibc-devel-0:2.40.9000-1.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 7/13] libasan-0:14.2.1-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 8/14] libatomic-0:14.2.1-4.fc42.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 9/15] libmpc-0:1.3.1-6.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [10/16] libubsan-0:14.2.1-4.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [11/17] make-1:4.4.1-9.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [12/18] libstdc++-devel-0:14.2.1-4.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [13/19] python3-0:3.13.0~rc3-1.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [14/20] python3-libs-0:3.13.0~rc3-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [15/21] dejavu-sans-fonts-0:2.37-24.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [16/22] freetype-0:2.13.2-6.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [17/23] libqhull_r-1:8.0.2-5.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [18/24] python3-cairo-0:1.25.1-5.fc41.a 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [19/25] python3-cycler-0:0.11.0-13.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [20/26] python3-dateutil-1:2.8.2-16.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [21/27] python3-fonttools-0:4.54.1-1.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [22/28] python3-kiwisolver-0:1.4.7-1.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [23/31] python3-packaging-0:24.1-2.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [24/32] python3-pillow-0:10.4.0-2.fc41. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [25/33] python3-pyparsing-0:3.1.2-7.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [26/34] flexiblas-netlib-0:3.4.4-3.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [27/35] libgfortran-0:14.2.1-4.fc42.aar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [28/36] python3-numpy-f2py-1:1.26.4-8.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [29/37] python3-pooch-0:1.8.2-3.fc41.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [30/38] python3-idna-0:3.9-1.fc42.noarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [31/40] kernel-headers-0:6.11.0-63.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [32/41] libxcrypt-devel-0:4.4.36-7.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [33/42] expat-0:2.6.3-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [34/43] libb2-0:0.98.1-12.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [35/44] mpdecimal-0:2.5.1-16.fc41.aarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [36/45] python-pip-wheel-0:24.2-2.fc42. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [37/46] tzdata-0:2024a-9.fc41.noarch 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [38/47] fonts-filesystem-1:2.0.5-17.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [39/48] harfbuzz-0:10.0.1-1.fc42.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [40/49] libpng-2:1.6.44-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [41/50] cairo-0:1.18.0-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [42/51] python3-six-0:1.16.0-23.fc41.no 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [43/52] python3-brotli-0:1.1.0-5.fc41.a 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [44/53] python3-fs-0:2.4.16-9.fc41.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [45/55] python3-pillow-tk-0:10.4.0-2.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [46/56] python3-tkinter-0:3.13.0~rc3-1. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [47/57] lcms2-0:2.16-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [48/58] libimagequant-0:4.0.3-5.fc41.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [49/59] libjpeg-turbo-0:3.0.4-1.fc42.aa 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [50/60] libraqm-0:0.10.1-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [51/61] libtiff-0:4.6.0-6.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [52/62] libwebp-0:1.4.0-4.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [53/63] libxcb-0:1.17.0-3.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [54/64] openjpeg-0:2.5.2-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [55/65] python3-olefile-0:0.47-5.fc41.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [56/66] flexiblas-0:3.4.4-3.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [57/67] flexiblas-openblas-openmp-0:3.4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [58/68] python3-platformdirs-0:4.2.2-2. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [59/69] python3-requests-0:2.32.3-3.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [60/71] glib2-0:2.82.1-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [61/72] graphite2-0:1.3.14-16.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [62/73] fontconfig-0:2.15.0-8.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [63/74] libX11-0:1.8.10-2.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [64/75] libXext-0:1.3.6-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [65/76] libXrender-0:0.9.11-7.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [66/77] pixman-0:0.43.4-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [67/78] python3-appdirs-0:1.4.4-24.fc42 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [68/79] tcl-1:8.6.14-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [69/80] tk-1:8.6.14-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [70/81] fribidi-0:1.0.16-1.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [71/82] jbigkit-libs-0:2.1-30.fc41.aarc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [72/83] liblerc-0:4.0.0-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [73/84] libXau-0:1.0.11-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [74/85] openblas-openmp-0:0.3.26-5.fc41 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [75/86] python3-charset-normalizer-0:3. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [76/87] gnutls-0:3.8.7-4.fc42.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [77/88] default-fonts-core-sans-0:4.1-3 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [78/89] xml-common-0:0.6.3-65.fc41.noar 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [79/90] libX11-common-0:1.8.10-2.fc42.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [80/91] libXft-0:2.3.8-7.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [81/92] openblas-0:0.3.26-5.fc41.aarch6 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [82/93] nettle-0:3.10-3.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [83/94] abattis-cantarell-vf-fonts-0:0. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [84/95] google-noto-sans-vf-fonts-0:202 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [85/96] google-noto-fonts-common-0:2024 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [86/97] python3-contourpy-0:1.3.0-1.fc4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [87/99] libxslt-0:1.1.42-2.fc41.aarch64 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 88/100] annobin-plugin-gcc-0:12.70-1. 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 89/101] gcc-plugin-annobin-0:14.2.1-4 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 90/102] annobin-docs-0:12.70-1.fc42.n 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 91/103] pyproject-rpm-macros-0:1.15.1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 92/104] python-rpm-macros-0:3.13-3.fc 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 93/105] python3-rpm-generators-0:14-1 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 94/106] python3-rpm-macros-0:3.13-3.f 100% | 0.0 B/s | 0.0 B | 00m00s >>> Already downloaded [ 95/106] python3-nose-0:1.3.7-59.fc41. 100% | 18.1 MiB/s | 352.2 KiB | 00m00s [ 96/106] python3-matplotlib-0:3.9.1-2. 100% | 131.5 MiB/s | 4.6 MiB | 00m00s [ 97/106] python3-matplotlib-data-0:3.9 100% | 30.1 MiB/s | 524.7 KiB | 00m00s [ 98/106] python3-matplotlib-tk-0:3.9.1 100% | 34.4 MiB/s | 105.8 KiB | 00m00s [ 99/106] flex-0:2.6.4-18.fc41.aarch64 100% | 57.1 MiB/s | 292.1 KiB | 00m00s [100/106] m4-0:1.4.19-10.fc41.aarch64 100% | 42.0 MiB/s | 301.4 KiB | 00m00s [101/106] python3-matplotlib-data-fonts 100% | 93.6 MiB/s | 2.3 MiB | 00m00s [102/106] python3-lxml-0:5.3.0-1.fc42.a 100% | 75.8 MiB/s | 1.3 MiB | 00m00s [103/106] python3-biopython-0:1.84-3.fc 100% | 136.2 MiB/s | 11.6 MiB | 00m00s -------------------------------------------------------------------------------- [106/106] Total 100% | 0.0 B/s | 0.0 B | 00m00s Running transaction [ 1/108] Verify package files 100% | 196.0 B/s | 106.0 B | 00m01s [ 2/108] Prepare transaction 100% | 821.0 B/s | 106.0 B | 00m00s [ 3/108] Installing fonts-filesystem-1 100% | 769.5 KiB/s | 788.0 B | 00m00s [ 4/108] Installing python-rpm-macros- 100% | 22.3 MiB/s | 22.8 KiB | 00m00s [ 5/108] Installing libgfortran-0:14.2 100% | 304.3 MiB/s | 1.5 MiB | 00m00s [ 6/108] Installing libmpc-0:1.3.1-6.f 100% | 137.8 MiB/s | 282.3 KiB | 00m00s [ 7/108] Installing python3-rpm-macros 100% | 6.5 MiB/s | 6.7 KiB | 00m00s [ 8/108] Installing python3-matplotlib 100% | 304.3 MiB/s | 7.9 MiB | 00m00s [ 9/108] Installing python3-matplotlib 100% | 123.5 MiB/s | 758.7 KiB | 00m00s [ 10/108] Installing tcl-1:8.6.14-2.fc4 100% | 226.5 MiB/s | 4.5 MiB | 00m00s [ 11/108] Installing libwebp-0:1.4.0-4. 100% | 309.7 MiB/s | 1.2 MiB | 00m00s [ 12/108] Installing libjpeg-turbo-0:3. 100% | 259.9 MiB/s | 798.5 KiB | 00m00s [ 13/108] Installing libpng-2:1.6.44-1. 100% | 54.6 MiB/s | 335.2 KiB | 00m00s [ 14/108] Installing tzdata-0:2024a-9.f 100% | 36.6 MiB/s | 1.9 MiB | 00m00s [ 15/108] Installing pyproject-rpm-macr 100% | 108.6 MiB/s | 111.2 KiB | 00m00s [ 16/108] Installing cpp-0:14.2.1-4.fc4 100% | 283.8 MiB/s | 31.8 MiB | 00m00s [ 17/108] Installing dejavu-sans-fonts- 100% | 367.2 MiB/s | 5.5 MiB | 00m00s [ 18/108] Installing abattis-cantarell- 100% | 94.9 MiB/s | 194.4 KiB | 00m00s [ 19/108] Installing annobin-docs-0:12. 100% | 96.5 MiB/s | 98.8 KiB | 00m00s [ 20/108] Installing libxslt-0:1.1.42-2 100% | 212.5 MiB/s | 870.3 KiB | 00m00s [ 21/108] Installing google-noto-fonts- 100% | 0.0 B/s | 18.3 KiB | 00m00s [ 22/108] Installing google-noto-sans-v 100% | 249.8 MiB/s | 1.2 MiB | 00m00s [ 23/108] Installing default-fonts-core 100% | 8.9 MiB/s | 18.2 KiB | 00m00s [ 24/108] Installing nettle-0:3.10-3.fc 100% | 234.3 MiB/s | 959.8 KiB | 00m00s [ 25/108] Installing gnutls-0:3.8.7-4.f 100% | 280.4 MiB/s | 3.4 MiB | 00m00s [ 26/108] Installing glib2-0:2.82.1-2.f 100% | 318.9 MiB/s | 16.6 MiB | 00m00s [ 27/108] Installing openblas-0:0.3.26- 100% | 95.5 MiB/s | 97.8 KiB | 00m00s [ 28/108] Installing openblas-openmp-0: 100% | 413.9 MiB/s | 19.5 MiB | 00m00s [ 29/108] Installing flexiblas-0:3.4.4- 100% | 48.5 MiB/s | 49.7 KiB | 00m00s [ 30/108] Installing flexiblas-openblas 100% | 191.7 MiB/s | 196.3 KiB | 00m00s [ 31/108] Installing flexiblas-netlib-0 100% | 327.9 MiB/s | 9.8 MiB | 00m00s [ 32/108] Installing libX11-common-0:1. 100% | 62.5 MiB/s | 1.2 MiB | 00m00s [ 33/108] Installing xml-common-0:0.6.3 100% | 39.6 MiB/s | 81.1 KiB | 00m00s [ 34/108] Installing libXau-0:1.0.11-7. 100% | 119.4 MiB/s | 244.5 KiB | 00m00s [ 35/108] Installing libxcb-0:1.17.0-3. 100% | 388.1 MiB/s | 5.0 MiB | 00m00s [ 36/108] Installing libX11-0:1.8.10-2. 100% | 268.6 MiB/s | 1.3 MiB | 00m00s [ 37/108] Installing libXrender-0:0.9.1 100% | 194.8 MiB/s | 199.4 KiB | 00m00s [ 38/108] Installing libXext-0:1.3.6-2. 100% | 206.3 MiB/s | 211.2 KiB | 00m00s [ 39/108] Installing liblerc-0:4.0.0-7. 100% | 298.8 MiB/s | 612.0 KiB | 00m00s [ 40/108] Installing jbigkit-libs-0:2.1 100% | 214.7 MiB/s | 439.7 KiB | 00m00s [ 41/108] Installing libtiff-0:4.6.0-6. 100% | 277.5 MiB/s | 852.5 KiB | 00m00s [ 42/108] Installing fribidi-0:1.0.16-1 100% | 246.6 MiB/s | 505.1 KiB | 00m00s [ 43/108] Installing pixman-0:0.43.4-2. 100% | 234.2 MiB/s | 719.5 KiB | 00m00s [ 44/108] Installing graphite2-0:1.3.14 100% | 243.2 MiB/s | 498.0 KiB | 00m00s [ 45/108] Installing harfbuzz-0:10.0.1- 100% | 282.3 MiB/s | 2.8 MiB | 00m00s [ 46/108] Installing freetype-0:2.13.2- 100% | 184.5 MiB/s | 944.7 KiB | 00m00s [ 47/108] Installing fontconfig-0:2.15. 100% | 2.3 MiB/s | 2.4 MiB | 00m01s [ 48/108] Installing cairo-0:1.18.0-4.f 100% | 238.5 MiB/s | 1.9 MiB | 00m00s [ 49/108] Installing libXft-0:2.3.8-7.f 100% | 31.5 MiB/s | 258.0 KiB | 00m00s [ 50/108] Installing tk-1:8.6.14-2.fc41 100% | 185.9 MiB/s | 3.9 MiB | 00m00s [ 51/108] Installing libraqm-0:0.10.1-1 100% | 193.3 MiB/s | 197.9 KiB | 00m00s [ 52/108] Installing m4-0:1.4.19-10.fc4 100% | 131.8 MiB/s | 675.0 KiB | 00m00s [ 53/108] Installing flex-0:2.6.4-18.fc 100% | 173.3 MiB/s | 887.4 KiB | 00m00s [ 54/108] Installing openjpeg-0:2.5.2-4 100% | 263.5 MiB/s | 539.7 KiB | 00m00s [ 55/108] Installing libimagequant-0:4. 100% | 217.7 MiB/s | 668.7 KiB | 00m00s [ 56/108] Installing lcms2-0:2.16-4.fc4 100% | 237.6 MiB/s | 486.5 KiB | 00m00s [ 57/108] Installing python-pip-wheel-0 100% | 620.8 MiB/s | 1.2 MiB | 00m00s [ 58/108] Installing mpdecimal-0:2.5.1- 100% | 322.3 MiB/s | 330.0 KiB | 00m00s [ 59/108] Installing libb2-0:0.98.1-12. 100% | 198.6 MiB/s | 203.3 KiB | 00m00s [ 60/108] Installing expat-0:2.6.3-1.fc 100% | 75.6 MiB/s | 541.7 KiB | 00m00s [ 61/108] Installing python3-libs-0:3.1 100% | 275.3 MiB/s | 50.1 MiB | 00m00s [ 62/108] Installing python3-0:3.13.0~r 100% | 41.7 MiB/s | 213.6 KiB | 00m00s [ 63/108] Installing python3-numpy-1:1. 100% | 286.6 MiB/s | 41.6 MiB | 00m00s [ 64/108] Installing python3-packaging- 100% | 70.5 MiB/s | 433.2 KiB | 00m00s [ 65/108] Installing python3-setuptools 100% | 174.5 MiB/s | 7.3 MiB | 00m00s [ 66/108] Installing python3-idna-0:3.9 100% | 157.7 MiB/s | 646.1 KiB | 00m00s [ 67/108] Installing python3-six-0:1.16 100% | 58.9 MiB/s | 120.7 KiB | 00m00s [ 68/108] Installing python3-tkinter-0: 100% | 211.1 MiB/s | 2.1 MiB | 00m00s [ 69/108] Installing python3-dateutil-1 100% | 145.3 MiB/s | 892.9 KiB | 00m00s [ 70/108] Installing python3-urllib3-0: 100% | 143.1 MiB/s | 1.0 MiB | 00m00s [ 71/108] Installing python3-rpm-genera 100% | 40.5 MiB/s | 82.9 KiB | 00m00s [ 72/108] Installing python3-devel-0:3. 100% | 129.6 MiB/s | 1.8 MiB | 00m00s [ 73/108] Installing python3-numpy-f2py 100% | 149.3 MiB/s | 2.8 MiB | 00m00s [ 74/108] Installing python3-contourpy- 100% | 146.9 MiB/s | 902.6 KiB | 00m00s [ 75/108] Installing python3-cairo-0:1. 100% | 191.6 MiB/s | 588.6 KiB | 00m00s [ 76/108] Installing python3-cycler-0:0 100% | 38.9 MiB/s | 39.8 KiB | 00m00s [ 77/108] Installing python3-kiwisolver 100% | 143.2 MiB/s | 293.3 KiB | 00m00s [ 78/108] Installing python3-pyparsing- 100% | 197.8 MiB/s | 1.0 MiB | 00m00s [ 79/108] Installing python3-brotli-0:1 100% | 223.3 MiB/s | 914.6 KiB | 00m00s [ 80/108] Installing python3-olefile-0: 100% | 111.9 MiB/s | 343.6 KiB | 00m00s [ 81/108] Installing python3-pillow-0:1 100% | 244.2 MiB/s | 4.6 MiB | 00m00s [ 82/108] Installing python3-pillow-tk- 100% | 244.3 MiB/s | 250.2 KiB | 00m00s [ 83/108] Installing python3-platformdi 100% | 85.5 MiB/s | 175.0 KiB | 00m00s [ 84/108] Installing python3-appdirs-0: 100% | 34.6 MiB/s | 70.9 KiB | 00m00s [ 85/108] Installing python3-fs-0:2.4.1 100% | 149.1 MiB/s | 1.3 MiB | 00m00s [ 86/108] Installing python3-charset-no 100% | 105.7 MiB/s | 324.7 KiB | 00m00s [ 87/108] Installing python3-requests-0 100% | 121.6 MiB/s | 498.0 KiB | 00m00s [ 88/108] Installing python3-pooch-0:1. 100% | 69.5 MiB/s | 640.5 KiB | 00m00s [ 89/108] Installing python3-scipy-0:1. 100% | 314.2 MiB/s | 72.0 MiB | 00m00s [ 90/108] Installing python3-lxml-0:5.3 100% | 241.3 MiB/s | 5.3 MiB | 00m00s [ 91/108] Installing python3-fonttools- 100% | 249.9 MiB/s | 19.0 MiB | 00m00s [ 92/108] Installing kernel-headers-0:6 100% | 134.0 MiB/s | 6.4 MiB | 00m00s [ 93/108] Installing libxcrypt-devel-0: 100% | 10.6 MiB/s | 32.6 KiB | 00m00s [ 94/108] Installing glibc-devel-0:2.40 100% | 108.9 MiB/s | 2.3 MiB | 00m00s [ 95/108] Installing libqhull_r-1:8.0.2 100% | 285.3 MiB/s | 584.4 KiB | 00m00s [ 96/108] Installing python3-matplotlib 100% | 72.0 MiB/s | 368.7 KiB | 00m00s [ 97/108] Installing python3-matplotlib 100% | 241.8 MiB/s | 22.0 MiB | 00m00s [ 98/108] Installing libstdc++-devel-0: 100% | 267.3 MiB/s | 15.2 MiB | 00m00s [ 99/108] Installing make-1:4.4.1-9.fc4 100% | 205.7 MiB/s | 1.9 MiB | 00m00s [100/108] Installing libubsan-0:14.2.1- 100% | 263.7 MiB/s | 540.1 KiB | 00m00s [101/108] Installing libatomic-0:14.2.1 100% | 193.1 MiB/s | 197.8 KiB | 00m00s [102/108] Installing libasan-0:14.2.1-4 100% | 267.1 MiB/s | 1.6 MiB | 00m00s [103/108] Installing gcc-0:14.2.1-4.fc4 100% | 328.0 MiB/s | 93.8 MiB | 00m00s [104/108] Installing gcc-c++-0:14.2.1-4 100% | 287.2 MiB/s | 35.0 MiB | 00m00s [105/108] Installing annobin-plugin-gcc 100% | 64.5 MiB/s | 1.1 MiB | 00m00s [106/108] Installing gcc-plugin-annobin 100% | 10.8 MiB/s | 198.6 KiB | 00m00s [107/108] Installing python3-nose-0:1.3 100% | 98.3 MiB/s | 1.3 MiB | 00m00s warning: posix.fork(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.wait(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead warning: posix.exec(): .fork(), .exec(), .wait() and .redirect2null() are deprecated, use rpm.spawn() or rpm.execute() instead [108/108] Installing python3-biopython- 100% | 90.1 MiB/s | 32.1 MiB | 00m00s Warning: skipped PGP checks for 3 packages from repository: copr_base Complete! Finish: build setup for ProDy-2.4.1-5.fc42.src.rpm Start: rpmbuild ProDy-2.4.1-5.fc42.src.rpm Building target platforms: aarch64 Building for target aarch64 setting SOURCE_DATE_EPOCH=1721174400 Executing(%mkbuilddir): /bin/sh -e /var/tmp/rpm-tmp.AQvF9h + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + test -d /builddir/build/BUILD/ProDy-2.4.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/ProDy-2.4.1-build + /usr/bin/rm -rf /builddir/build/BUILD/ProDy-2.4.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build + /usr/bin/mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/SPECPARTS + RPM_EC=0 ++ jobs -p + exit 0 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.9Ttzw6 + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd /builddir/build/BUILD/ProDy-2.4.1-build + rm -rf ProDy-2.4.1 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/ProDy-2.4.1.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd ProDy-2.4.1 + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/ProDy-change_requires.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + find prody/proteins/ccealign -name '*.h' -exec chmod 0644 '{}' ';' + find prody/proteins/ccealign -name '*.cpp' -exec chmod 0644 '{}' ';' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.MKuDcx + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py build '--executable=/usr/bin/python3 -sP' running build running build_py creating build creating build/lib.linux-aarch64-cpython-313 creating build/lib.linux-aarch64-cpython-313/prody copying prody/__init__.py -> build/lib.linux-aarch64-cpython-313/prody creating build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/subset.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/selection.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/select.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/segment.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/residue.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/pointer.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/nbexclusion.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/improper.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/hierview.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/functions.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/flags.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/fields.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/donor.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/dihedral.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/crossterm.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/chain.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/bond.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/atommap.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/atomic.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/atomgroup.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/atom.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/angle.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/acceptor.py -> build/lib.linux-aarch64-cpython-313/prody/atomic copying prody/atomic/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/atomic creating build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/uniprot.py -> build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/quartataweb.py -> build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/pfam.py -> build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/goa.py -> build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/dali.py -> build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/cath.py -> build/lib.linux-aarch64-cpython-313/prody/database copying prody/database/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/database creating build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/vmdfile.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/signature.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/sampling.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/rtb.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/plotting.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/perturb.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/pca.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/nmdfile.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/nma.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/modeset.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/mode.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/mechstiff.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/imanm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/heatmapper.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/gnm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/gamma.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/functions.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/exgnm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/exanm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/essa.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/entropy.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/editing.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/compare.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/clustenm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/bildfile.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/bbenm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/anm.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/analysis.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/adaptive.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics copying prody/dynamics/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/dynamics creating build/lib.linux-aarch64-cpython-313/prody/ensemble copying prody/ensemble/pdbensemble.py -> build/lib.linux-aarch64-cpython-313/prody/ensemble copying prody/ensemble/functions.py -> build/lib.linux-aarch64-cpython-313/prody/ensemble copying prody/ensemble/ensemble.py -> build/lib.linux-aarch64-cpython-313/prody/ensemble copying prody/ensemble/conformation.py -> build/lib.linux-aarch64-cpython-313/prody/ensemble copying prody/ensemble/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/ensemble creating build/lib.linux-aarch64-cpython-313/prody/kdtree copying prody/kdtree/kdtree.py -> build/lib.linux-aarch64-cpython-313/prody/kdtree copying prody/kdtree/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/kdtree creating build/lib.linux-aarch64-cpython-313/prody/measure copying prody/measure/transform.py -> build/lib.linux-aarch64-cpython-313/prody/measure copying prody/measure/measure.py -> build/lib.linux-aarch64-cpython-313/prody/measure copying prody/measure/contacts.py -> build/lib.linux-aarch64-cpython-313/prody/measure copying prody/measure/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/measure creating build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/wwpdb.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/waterbridges.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/stride.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/starfile.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/pdbfile.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/pdbclusters.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/localpdb.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/header.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/functions.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/fixer.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/emdfile.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/dssp.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/compare.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/cifheader.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/ciffile.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/blastpdb.py -> build/lib.linux-aarch64-cpython-313/prody/proteins copying prody/proteins/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/proteins creating build/lib.linux-aarch64-cpython-313/prody/sequence copying prody/sequence/sequence.py -> build/lib.linux-aarch64-cpython-313/prody/sequence copying prody/sequence/plotting.py -> build/lib.linux-aarch64-cpython-313/prody/sequence copying prody/sequence/msafile.py -> build/lib.linux-aarch64-cpython-313/prody/sequence copying prody/sequence/msa.py -> build/lib.linux-aarch64-cpython-313/prody/sequence copying prody/sequence/analysis.py -> build/lib.linux-aarch64-cpython-313/prody/sequence copying prody/sequence/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/sequence creating build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/trajfile.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/trajectory.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/trajbase.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/psffile.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/frame.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/dcdfile.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory copying prody/trajectory/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/trajectory creating build/lib.linux-aarch64-cpython-313/prody/chromatin copying prody/chromatin/straw.py -> build/lib.linux-aarch64-cpython-313/prody/chromatin copying prody/chromatin/norm.py -> build/lib.linux-aarch64-cpython-313/prody/chromatin copying prody/chromatin/hic.py -> build/lib.linux-aarch64-cpython-313/prody/chromatin copying prody/chromatin/functions.py -> build/lib.linux-aarch64-cpython-313/prody/chromatin copying prody/chromatin/cluster.py -> build/lib.linux-aarch64-cpython-313/prody/chromatin copying prody/chromatin/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/chromatin creating build/lib.linux-aarch64-cpython-313/prody/compounds copying prody/compounds/pdbligands.py -> build/lib.linux-aarch64-cpython-313/prody/compounds copying prody/compounds/functions.py -> build/lib.linux-aarch64-cpython-313/prody/compounds copying prody/compounds/ccd.py -> build/lib.linux-aarch64-cpython-313/prody/compounds copying prody/compounds/bird.py -> build/lib.linux-aarch64-cpython-313/prody/compounds copying prody/compounds/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/compounds creating build/lib.linux-aarch64-cpython-313/prody/domain_decomposition copying prody/domain_decomposition/spectrus.py -> build/lib.linux-aarch64-cpython-313/prody/domain_decomposition copying prody/domain_decomposition/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/domain_decomposition creating build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/settings.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/seqtools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/pathtools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/misctools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/logger.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/legacy.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/laptools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/eigtools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/drawtools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/doctools.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/checkers.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/catchall.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/utilities copying prody/utilities/TreeConstruction.py -> build/lib.linux-aarch64-cpython-313/prody/utilities creating build/lib.linux-aarch64-cpython-313/prody/apps copying prody/apps/apptools.py -> build/lib.linux-aarch64-cpython-313/prody/apps copying prody/apps/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/apps creating build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_select.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_pca.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_gnm.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_fetch.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_energy.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_eda.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_contacts.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_clustenm.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_catdcd.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_blast.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_biomol.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_anm.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/prody_align.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/nmaoptions.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps copying prody/apps/prody_apps/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps creating build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_search.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_refine.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_rankorder.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_occupancy.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_merge.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_filter.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_fetch.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_conserv.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/evol_coevol.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps copying prody/apps/evol_apps/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps creating build/lib.linux-aarch64-cpython-313/prody/tests copying prody/tests/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests creating build/lib.linux-aarch64-cpython-313/prody/tests/apps copying prody/tests/apps/test_prody_pca.py -> build/lib.linux-aarch64-cpython-313/prody/tests/apps copying prody/tests/apps/test_prody_gnm.py -> build/lib.linux-aarch64-cpython-313/prody/tests/apps copying prody/tests/apps/test_prody_examples.py -> build/lib.linux-aarch64-cpython-313/prody/tests/apps copying prody/tests/apps/test_prody_catdcd.py -> build/lib.linux-aarch64-cpython-313/prody/tests/apps copying prody/tests/apps/test_prody_anm.py -> build/lib.linux-aarch64-cpython-313/prody/tests/apps copying prody/tests/apps/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/apps creating build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/test_subset.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/test_select.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/test_hierview.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/test_fragment.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/test_atommap.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/test_atomic.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic copying prody/tests/atomic/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/atomic creating build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles creating build/lib.linux-aarch64-cpython-313/prody/tests/dynamics copying prody/tests/dynamics/test_signature.py -> build/lib.linux-aarch64-cpython-313/prody/tests/dynamics copying prody/tests/dynamics/test_pca.py -> build/lib.linux-aarch64-cpython-313/prody/tests/dynamics copying prody/tests/dynamics/test_enms.py -> build/lib.linux-aarch64-cpython-313/prody/tests/dynamics copying prody/tests/dynamics/test_editing.py -> build/lib.linux-aarch64-cpython-313/prody/tests/dynamics copying prody/tests/dynamics/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/dynamics creating build/lib.linux-aarch64-cpython-313/prody/tests/ensemble copying prody/tests/ensemble/test_pdbensemble.py -> build/lib.linux-aarch64-cpython-313/prody/tests/ensemble copying prody/tests/ensemble/test_functions.py -> build/lib.linux-aarch64-cpython-313/prody/tests/ensemble copying prody/tests/ensemble/test_ensemble.py -> build/lib.linux-aarch64-cpython-313/prody/tests/ensemble copying prody/tests/ensemble/test_conformation.py -> build/lib.linux-aarch64-cpython-313/prody/tests/ensemble copying prody/tests/ensemble/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/ensemble creating build/lib.linux-aarch64-cpython-313/prody/tests/kdtree copying prody/tests/kdtree/test_kdtree.py -> build/lib.linux-aarch64-cpython-313/prody/tests/kdtree copying prody/tests/kdtree/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/kdtree creating build/lib.linux-aarch64-cpython-313/prody/tests/measure copying prody/tests/measure/test_transform.py -> build/lib.linux-aarch64-cpython-313/prody/tests/measure copying prody/tests/measure/test_measure.py -> build/lib.linux-aarch64-cpython-313/prody/tests/measure copying prody/tests/measure/test_contacts.py -> build/lib.linux-aarch64-cpython-313/prody/tests/measure copying prody/tests/measure/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/measure creating build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/test_wwpdb.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/test_pdbfile.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/test_localpdb.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/test_header.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/test_dssp.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/test_ciffile.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins copying prody/tests/proteins/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/proteins creating build/lib.linux-aarch64-cpython-313/prody/tests/sequence copying prody/tests/sequence/test_sequence.py -> build/lib.linux-aarch64-cpython-313/prody/tests/sequence copying prody/tests/sequence/test_msafile.py -> build/lib.linux-aarch64-cpython-313/prody/tests/sequence copying prody/tests/sequence/test_msa.py -> build/lib.linux-aarch64-cpython-313/prody/tests/sequence copying prody/tests/sequence/test_analysis.py -> build/lib.linux-aarch64-cpython-313/prody/tests/sequence copying prody/tests/sequence/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/sequence creating build/lib.linux-aarch64-cpython-313/prody/tests/trajectory copying prody/tests/trajectory/test_frame.py -> build/lib.linux-aarch64-cpython-313/prody/tests/trajectory copying prody/tests/trajectory/test_dcdfile.py -> build/lib.linux-aarch64-cpython-313/prody/tests/trajectory copying prody/tests/trajectory/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/trajectory creating build/lib.linux-aarch64-cpython-313/prody/tests/utilities copying prody/tests/utilities/test_pathtools.py -> build/lib.linux-aarch64-cpython-313/prody/tests/utilities copying prody/tests/utilities/test_misctools.py -> build/lib.linux-aarch64-cpython-313/prody/tests/utilities copying prody/tests/utilities/test_checkers.py -> build/lib.linux-aarch64-cpython-313/prody/tests/utilities copying prody/tests/utilities/__init__.py -> build/lib.linux-aarch64-cpython-313/prody/tests/utilities creating build/lib.linux-aarch64-cpython-313/prody/utilities/datafiles copying prody/utilities/datafiles/saxs_water.dat -> build/lib.linux-aarch64-cpython-313/prody/utilities/datafiles copying prody/utilities/datafiles/mod_res_map.dat -> build/lib.linux-aarch64-cpython-313/prody/utilities/datafiles copying prody/tests/datafiles/pdbRTER.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb4v8r_hex.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb4v8r_h36.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb3p3w.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb3o21.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb3mht.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb3hsy.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb2nwl-opm.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_truncated.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb2k39_ca.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb2gb1_truncated.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi_ca.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1ubi.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1r19_dssp.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg_oneatom.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pdb1ejg.pdb -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_vectors.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_evalues.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_sca.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot_di.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/hit1ubi.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_vectors.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_evalues.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_vectors.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_evalues.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/commute1ubi.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_vectors.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_evalues.dat -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_project.coo -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/rtb2gb1_hessian.coo -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/pca2k39_cov.coo -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/exanm2nwl_hessian.coo -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/anm1ubi_hessian.coo -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/dcd2k39_truncated.dcd -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/xmlSTI.xml -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.sth -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.slx -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/msa_Cys_knot.fasta -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6zu5.cif -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles copying prody/tests/datafiles/mmcif_6yfy.cif -> build/lib.linux-aarch64-cpython-313/prody/tests/datafiles running build_ext building 'prody.dynamics.rtbtools' extension creating build/temp.linux-aarch64-cpython-313 creating build/temp.linux-aarch64-cpython-313/prody creating build/temp.linux-aarch64-cpython-313/prody/dynamics gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/dynamics/rtbtools.c -o build/temp.linux-aarch64-cpython-313/prody/dynamics/rtbtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/dynamics/rtbtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/dynamics/rtbtools.cpython-313-aarch64-linux-gnu.so building 'prody.dynamics.smtools' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/dynamics/smtools.c -o build/temp.linux-aarch64-cpython-313/prody/dynamics/smtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/dynamics/smtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/dynamics/smtools.cpython-313-aarch64-linux-gnu.so building 'prody.sequence.msatools' extension creating build/temp.linux-aarch64-cpython-313/prody/sequence gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/sequence/msatools.c -o build/temp.linux-aarch64-cpython-313/prody/sequence/msatools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/sequence/msatools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/sequence/msatools.cpython-313-aarch64-linux-gnu.so building 'prody.sequence.msaio' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/sequence/msaio.c -o build/temp.linux-aarch64-cpython-313/prody/sequence/msaio.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/sequence/msaio.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/sequence/msaio.cpython-313-aarch64-linux-gnu.so building 'prody.sequence.seqtools' extension gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/sequence/seqtools.c -o build/temp.linux-aarch64-cpython-313/prody/sequence/seqtools.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/sequence/seqtools.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/sequence/seqtools.cpython-313-aarch64-linux-gnu.so building 'prody.kdtree._CKDTree' extension creating build/temp.linux-aarch64-cpython-313/prody/kdtree gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/kdtree/KDTree.c -o build/temp.linux-aarch64-cpython-313/prody/kdtree/KDTree.o gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -I/usr/lib64/python3.13/site-packages/numpy/core/include -I/usr/include/python3.13 -c prody/kdtree/KDTreemodule.c -o build/temp.linux-aarch64-cpython-313/prody/kdtree/KDTreemodule.o gcc -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/kdtree/KDTree.o build/temp.linux-aarch64-cpython-313/prody/kdtree/KDTreemodule.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/kdtree/_CKDTree.cpython-313-aarch64-linux-gnu.so building 'prody.proteins.ccealign' extension creating build/temp.linux-aarch64-cpython-313/prody/proteins creating build/temp.linux-aarch64-cpython-313/prody/proteins/ccealign gcc -fno-strict-overflow -Wsign-compare -DDYNAMIC_ANNOTATIONS_ENABLED=1 -DNDEBUG -fexceptions -fexceptions -fexceptions -O3 -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -fPIC -Iprody/utilities/tnt -I/usr/include/python3.13 -c prody/proteins/ccealign/ccealignmodule.cpp -o build/temp.linux-aarch64-cpython-313/prody/proteins/ccealign/ccealignmodule.o In file included from prody/utilities/tnt/tnt.h:41, from prody/proteins/ccealign/ccealignmodule.h:43, from prody/proteins/ccealign/ccealignmodule.cpp:38: In member function ‘TNT::Array1D::set_(double*, double*, double const&)’, inlined from ‘TNT::Array1D::Array1D(int, double const&)’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest(cePoint*, cePoint*, afp**, int, int, int)’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ~~~^~~ g++ -shared -Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes -O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer build/temp.linux-aarch64-cpython-313/prody/proteins/ccealign/ccealignmodule.o -L/usr/lib64 -o build/lib.linux-aarch64-cpython-313/prody/proteins/ccealign.cpython-313-aarch64-linux-gnu.so In member function ‘set_’, inlined from ‘__ct ’ at prody/utilities/tnt/tnt_array1d.h:118:6, inlined from ‘findBest’ at prody/proteins/ccealign/ccealignmodule.cpp:630:26: prody/utilities/tnt/tnt_array1d.h:260:20: warning: ‘__builtin_memset’ specified bound between 18446744056529682432 and 18446744073709551608 exceeds maximum object size 9223372036854775807 [-Wstringop-overflow=] 260 | *p = a; | ^ + RPM_EC=0 ++ jobs -p + exit 0 Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.bCzWko + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + '[' /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT '!=' / ']' + rm -rf /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT ++ dirname /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build + mkdir /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Cforce-frame-pointers=yes -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd ProDy-2.4.1 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -mbranch-protection=standard -fasynchronous-unwind-tables -fstack-clash-protection -fno-omit-frame-pointer -mno-omit-leaf-frame-pointer ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,pack-relative-relocs -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + /usr/bin/python3 setup.py install -O1 --skip-build --root /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT --prefix /usr running install /usr/lib/python3.13/site-packages/setuptools/_distutils/cmd.py:66: SetuptoolsDeprecationWarning: setup.py install is deprecated. !! ******************************************************************************** Please avoid running ``setup.py`` directly. Instead, use pypa/build, pypa/installer or other standards-based tools. Follow the current Python packaging guidelines when building Python RPM packages. See https://blog.ganssle.io/articles/2021/10/setup-py-deprecated.html and https://docs.fedoraproject.org/en-US/packaging-guidelines/Python/ for details. ******************************************************************************** !! self.initialize_options() running install_lib creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64 creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13 creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-313/prody/tests/utilities/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-313/prody/tests/utilities/test_checkers.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-313/prody/tests/utilities/test_misctools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities copying build/lib.linux-aarch64-cpython-313/prody/tests/utilities/test_pathtools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-313/prody/tests/trajectory/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-313/prody/tests/trajectory/test_dcdfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory copying build/lib.linux-aarch64-cpython-313/prody/tests/trajectory/test_frame.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-313/prody/tests/sequence/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-313/prody/tests/sequence/test_analysis.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-313/prody/tests/sequence/test_msa.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-313/prody/tests/sequence/test_msafile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence copying build/lib.linux-aarch64-cpython-313/prody/tests/sequence/test_sequence.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/test_ciffile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/test_dssp.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/test_header.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/test_localpdb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/test_pdbfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins copying build/lib.linux-aarch64-cpython-313/prody/tests/proteins/test_wwpdb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-313/prody/tests/measure/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-313/prody/tests/measure/test_contacts.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-313/prody/tests/measure/test_measure.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure copying build/lib.linux-aarch64-cpython-313/prody/tests/measure/test_transform.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree copying build/lib.linux-aarch64-cpython-313/prody/tests/kdtree/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree copying build/lib.linux-aarch64-cpython-313/prody/tests/kdtree/test_kdtree.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-313/prody/tests/ensemble/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-313/prody/tests/ensemble/test_conformation.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-313/prody/tests/ensemble/test_ensemble.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-313/prody/tests/ensemble/test_functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble copying build/lib.linux-aarch64-cpython-313/prody/tests/ensemble/test_pdbensemble.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-313/prody/tests/dynamics/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-313/prody/tests/dynamics/test_editing.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-313/prody/tests/dynamics/test_enms.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-313/prody/tests/dynamics/test_pca.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics copying build/lib.linux-aarch64-cpython-313/prody/tests/dynamics/test_signature.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/mmcif_6yfy.cif -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/mmcif_6zu5.cif -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/msa_3hsyA_3o21A.fasta -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/msa_Cys_knot.fasta -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/msa_Cys_knot.slx -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/msa_Cys_knot.sth -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/xmlSTI.xml -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/dcd2k39_truncated.dcd -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/anm1ubi_hessian.coo -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/exanm2nwl_hessian.coo -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/gnm1ubi_kirchhoff.coo -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pca2k39_cov.coo -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/rtb2gb1_hessian.coo -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/rtb2gb1_project.coo -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/anm1ubi_evalues.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/anm1ubi_vectors.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/commute1ubi.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/exanm2nwl_evalues.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/exanm2nwl_vectors.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/gnm1ubi_evalues.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/gnm1ubi_vectors.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/hit1ubi.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/msa_Cys_knot_di.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/msa_Cys_knot_sca.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pca2k39_evalues.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pca2k39_vectors.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1ejg.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1ejg_oneatom.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1r19_dssp.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1tw7_step3_charmm2namd.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_h36.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1tw7_step3_charmm2namd_doubled_hex.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1ubi.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb1ubi_ca.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb2gb1_truncated.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb2k39_ca.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb2k39_truncated.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb2nwl-opm.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb3hsy.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb3mht.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb3o21.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb3p3w.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb4v8r_h36.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb4v8r_hex.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdb6fpj_Bb_fixed_solv_ions.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/pdbRTER.pdb -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles copying build/lib.linux-aarch64-cpython-313/prody/tests/datafiles/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/test_atomic.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/test_atommap.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/test_fragment.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/test_hierview.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/test_select.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic copying build/lib.linux-aarch64-cpython-313/prody/tests/atomic/test_subset.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/apps/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/apps/test_prody_anm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/apps/test_prody_catdcd.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/apps/test_prody_examples.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/apps/test_prody_gnm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/apps/test_prody_pca.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps copying build/lib.linux-aarch64-cpython-313/prody/tests/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_coevol.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_conserv.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_fetch.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_filter.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_merge.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_occupancy.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_rankorder.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_refine.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/evol_apps/evol_search.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/nmaoptions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_align.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_anm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_biomol.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_blast.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_catdcd.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_clustenm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_contacts.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_eda.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_energy.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_fetch.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_gnm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_pca.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/prody_apps/prody_select.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps copying build/lib.linux-aarch64-cpython-313/prody/apps/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps copying build/lib.linux-aarch64-cpython-313/prody/apps/apptools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-313/prody/utilities/datafiles/mod_res_map.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-313/prody/utilities/datafiles/saxs_water.dat -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/datafiles copying build/lib.linux-aarch64-cpython-313/prody/utilities/TreeConstruction.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/catchall.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/checkers.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/doctools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/drawtools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/eigtools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/laptools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/legacy.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/logger.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/misctools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/pathtools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/seqtools.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities copying build/lib.linux-aarch64-cpython-313/prody/utilities/settings.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition copying build/lib.linux-aarch64-cpython-313/prody/domain_decomposition/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition copying build/lib.linux-aarch64-cpython-313/prody/domain_decomposition/spectrus.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-313/prody/compounds/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-313/prody/compounds/bird.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-313/prody/compounds/ccd.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-313/prody/compounds/functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds copying build/lib.linux-aarch64-cpython-313/prody/compounds/pdbligands.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-313/prody/chromatin/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-313/prody/chromatin/cluster.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-313/prody/chromatin/functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-313/prody/chromatin/hic.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-313/prody/chromatin/norm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin copying build/lib.linux-aarch64-cpython-313/prody/chromatin/straw.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/dcdfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/frame.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/psffile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/trajbase.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/trajectory.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory copying build/lib.linux-aarch64-cpython-313/prody/trajectory/trajfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/seqtools.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/msaio.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/msatools.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/analysis.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/msa.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/msafile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/plotting.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence copying build/lib.linux-aarch64-cpython-313/prody/sequence/sequence.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/ccealign.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/blastpdb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/ciffile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/cifheader.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/compare.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/dssp.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/emdfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/fixer.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/header.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/localpdb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/pdbclusters.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/pdbfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/starfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/stride.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/waterbridges.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins copying build/lib.linux-aarch64-cpython-313/prody/proteins/wwpdb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-313/prody/measure/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-313/prody/measure/contacts.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-313/prody/measure/measure.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure copying build/lib.linux-aarch64-cpython-313/prody/measure/transform.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-313/prody/kdtree/_CKDTree.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-313/prody/kdtree/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree copying build/lib.linux-aarch64-cpython-313/prody/kdtree/kdtree.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-313/prody/ensemble/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-313/prody/ensemble/conformation.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-313/prody/ensemble/ensemble.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-313/prody/ensemble/functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble copying build/lib.linux-aarch64-cpython-313/prody/ensemble/pdbensemble.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/smtools.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/rtbtools.cpython-313-aarch64-linux-gnu.so -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/adaptive.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/analysis.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/anm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/bbenm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/bildfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/clustenm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/compare.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/editing.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/entropy.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/essa.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/exanm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/exgnm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/gamma.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/gnm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/heatmapper.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/imanm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/mechstiff.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/mode.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/modeset.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/nma.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/nmdfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/pca.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/perturb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/plotting.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/rtb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/sampling.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/signature.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics copying build/lib.linux-aarch64-cpython-313/prody/dynamics/vmdfile.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/cath.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/dali.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/goa.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/pfam.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/quartataweb.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database copying build/lib.linux-aarch64-cpython-313/prody/database/uniprot.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database creating /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/acceptor.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/angle.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/atom.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/atomgroup.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/atomic.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/atommap.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/bond.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/chain.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/crossterm.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/dihedral.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/donor.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/fields.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/flags.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/functions.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/hierview.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/improper.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/nbexclusion.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/pointer.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/residue.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/segment.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/select.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/selection.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/atomic/subset.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic copying build/lib.linux-aarch64-cpython-313/prody/__init__.py -> /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/test_checkers.py to test_checkers.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/test_misctools.py to test_misctools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/test_pathtools.py to test_pathtools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory/test_dcdfile.py to test_dcdfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory/test_frame.py to test_frame.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/test_analysis.py to test_analysis.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/test_msa.py to test_msa.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/test_msafile.py to test_msafile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/test_sequence.py to test_sequence.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/test_ciffile.py to test_ciffile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/test_dssp.py to test_dssp.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/test_header.py to test_header.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/test_localpdb.py to test_localpdb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/test_pdbfile.py to test_pdbfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/test_wwpdb.py to test_wwpdb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/test_contacts.py to test_contacts.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/test_measure.py to test_measure.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/test_transform.py to test_transform.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree/test_kdtree.py to test_kdtree.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/test_conformation.py to test_conformation.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/test_ensemble.py to test_ensemble.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/test_functions.py to test_functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/test_pdbensemble.py to test_pdbensemble.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/test_editing.py to test_editing.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/test_enms.py to test_enms.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/test_pca.py to test_pca.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/test_signature.py to test_signature.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/test_atomic.py to test_atomic.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/test_atommap.py to test_atommap.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/test_fragment.py to test_fragment.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/test_hierview.py to test_hierview.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/test_select.py to test_select.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/test_subset.py to test_subset.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/test_prody_anm.py to test_prody_anm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/test_prody_catdcd.py to test_prody_catdcd.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/test_prody_examples.py to test_prody_examples.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/test_prody_gnm.py to test_prody_gnm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/test_prody_pca.py to test_prody_pca.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_coevol.py to evol_coevol.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_conserv.py to evol_conserv.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_fetch.py to evol_fetch.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_filter.py to evol_filter.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_merge.py to evol_merge.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_occupancy.py to evol_occupancy.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_rankorder.py to evol_rankorder.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_refine.py to evol_refine.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/evol_search.py to evol_search.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/nmaoptions.py to nmaoptions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_align.py to prody_align.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_anm.py to prody_anm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_biomol.py to prody_biomol.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_blast.py to prody_blast.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_catdcd.py to prody_catdcd.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_clustenm.py to prody_clustenm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_contacts.py to prody_contacts.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_eda.py to prody_eda.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_energy.py to prody_energy.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_fetch.py to prody_fetch.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_gnm.py to prody_gnm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_pca.py to prody_pca.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/prody_select.py to prody_select.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/apptools.py to apptools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/TreeConstruction.py to TreeConstruction.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/catchall.py to catchall.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/checkers.py to checkers.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/doctools.py to doctools.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/drawtools.py to drawtools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/eigtools.py to eigtools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/laptools.py to laptools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/legacy.py to legacy.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/logger.py to logger.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/misctools.py to misctools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/pathtools.py to pathtools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/seqtools.py to seqtools.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/settings.py to settings.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition/spectrus.py to spectrus.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/bird.py to bird.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/ccd.py to ccd.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/functions.py to functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/pdbligands.py to pdbligands.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/cluster.py to cluster.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/functions.py to functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/hic.py to hic.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/norm.py to norm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/straw.py to straw.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/dcdfile.py to dcdfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/frame.py to frame.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/psffile.py to psffile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/trajbase.py to trajbase.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/trajectory.py to trajectory.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/trajfile.py to trajfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/analysis.py to analysis.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/msa.py to msa.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/msafile.py to msafile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/plotting.py to plotting.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/sequence.py to sequence.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/blastpdb.py to blastpdb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/ciffile.py to ciffile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/cifheader.py to cifheader.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/compare.py to compare.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/dssp.py to dssp.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/emdfile.py to emdfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/fixer.py to fixer.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/functions.py to functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/header.py to header.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py to localpdb.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/pdbclusters.py to pdbclusters.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/pdbfile.py to pdbfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/starfile.py to starfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/stride.py to stride.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/waterbridges.py to waterbridges.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/wwpdb.py to wwpdb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/contacts.py to contacts.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/measure.py to measure.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/transform.py to transform.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree/kdtree.py to kdtree.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/conformation.py to conformation.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/ensemble.py to ensemble.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/functions.py to functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/pdbensemble.py to pdbensemble.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/adaptive.py to adaptive.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/analysis.py to analysis.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/anm.py to anm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/bbenm.py to bbenm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/bildfile.py to bildfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/clustenm.py to clustenm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/compare.py to compare.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/editing.py to editing.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/entropy.py to entropy.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/essa.py to essa.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/exanm.py to exanm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/exgnm.py to exgnm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/functions.py to functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/gamma.py to gamma.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/gnm.py to gnm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/heatmapper.py to heatmapper.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/imanm.py to imanm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/mechstiff.py to mechstiff.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/mode.py to mode.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/modeset.py to modeset.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/nma.py to nma.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/nmdfile.py to nmdfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/pca.py to pca.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/perturb.py to perturb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/plotting.py to plotting.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/rtb.py to rtb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/sampling.py to sampling.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/signature.py to signature.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/vmdfile.py to vmdfile.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/cath.py to cath.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/dali.py to dali.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/goa.py to goa.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/pfam.py to pfam.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/quartataweb.py to quartataweb.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/uniprot.py to uniprot.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__init__.py to __init__.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/acceptor.py to acceptor.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/angle.py to angle.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/atom.py to atom.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/atomgroup.py to atomgroup.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/atomic.py to atomic.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/atommap.py to atommap.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/bond.py to bond.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/chain.py to chain.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/crossterm.py to crossterm.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/dihedral.py to dihedral.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/donor.py to donor.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/fields.py to fields.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/flags.py to flags.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/functions.py to functions.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/hierview.py to hierview.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/improper.py to improper.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/nbexclusion.py to nbexclusion.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/pointer.py to pointer.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/residue.py to residue.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/segment.py to segment.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/select.py to select.cpython-313.pyc /usr/lib64/python3.13/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/selection.py to selection.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/subset.py to subset.cpython-313.pyc byte-compiling /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/__init__.py to __init__.cpython-313.pyc writing byte-compilation script '/tmp/tmpo42pjw6d.py' /usr/bin/python3 /tmp/tmpo42pjw6d.py /usr/lib64/python3.13/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' /usr/lib64/python3.13/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.13/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.13/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' removing /tmp/tmpo42pjw6d.py running install_egg_info running egg_info creating ProDy.egg-info writing ProDy.egg-info/PKG-INFO writing dependency_links to ProDy.egg-info/dependency_links.txt writing entry points to ProDy.egg-info/entry_points.txt writing requirements to ProDy.egg-info/requires.txt writing top-level names to ProDy.egg-info/top_level.txt writing manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest file 'ProDy.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' warning: no files found matching 'prody/*/*/*.c' warning: no files found matching 'prody/*/*.cpp' warning: no files found matching 'prody/utilities/datafiles/*.txt' adding license file 'LICENSE.rst' writing manifest file 'ProDy.egg-info/SOURCES.txt' Copying ProDy.egg-info to /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/ProDy-2.4.1-py3.13.egg-info running install_scripts Installing evol script to /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin Installing prody script to /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + rm -rfv /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/__pycache__ + mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + rm -f /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody + cd scripts + cp -pr ./prody ./python3.13-prody + cp -pr ./evol ./python3.13-evol + sed -i '1s=^#!/usr/bin/\(python\|env python\)[0-9.]*=#!/usr/bin/python3=' ./prody ./evol ./python3.13-prody ./python3.13-evol + for i in prody-3.13 + touch -r ./python3.13-prody prody-3.13 + install -p prody-3.13 /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./python3.13-prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + ln -sf /usr/bin/python3.13-prody /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/prody-3.13 + for i in evol-3.13 + touch -r ./python3.13-evol evol-3.13 + install -p evol-3.13 /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + install -p ./python3.13-evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin + ln -sf /usr/bin/python3.13-evol /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/bin/evol-3.13 + cd .. + /usr/bin/find-debuginfo -j4 --strict-build-id -m -i --build-id-seed 2.4.1-5.fc42 --unique-debug-suffix -2.4.1-5.fc42.aarch64 --unique-debug-src-base ProDy-2.4.1-5.fc42.aarch64 --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1 find-debuginfo: starting Extracting debug info from 7 files DWARF-compressing 7 files sepdebugcrcfix: Updated 7 CRC32s, 0 CRC32s did match. Creating .debug symlinks for symlinks to ELF files Copying sources found by 'debugedit -l' to /usr/src/debug/ProDy-2.4.1-5.fc42.aarch64 464 blocks find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j4 Bytecompiling .py files below /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib/debug/usr/lib64/python3.13 using python3.13 Bytecompiling .py files below /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13 using python3.13 /usr/lib64/python3.13/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/flags.py:463: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:2: SyntaxWarning: invalid escape sequence '\|' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:719: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:738: SyntaxWarning: invalid escape sequence '\w' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:757: SyntaxWarning: invalid escape sequence '\d' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:758: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/atomic/select.py:761: SyntaxWarning: invalid escape sequence '\ ' /usr/lib64/python3.13/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.13/site-packages/prody/dynamics/pca.py:59: SyntaxWarning: invalid escape sequence '\_' /usr/lib64/python3.13/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.13/site-packages/prody/proteins/dssp.py:78: SyntaxWarning: invalid escape sequence '\*' /usr/lib64/python3.13/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:438: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:440: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/proteins/localpdb.py:442: SyntaxWarning: invalid escape sequence '\.' /usr/lib64/python3.13/site-packages/prody/sequence/analysis.py:169: SyntaxWarning: invalid escape sequence '\{' /usr/lib64/python3.13/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' /usr/lib64/python3.13/site-packages/prody/utilities/doctools.py:48: SyntaxWarning: invalid escape sequence '\i' + /usr/lib/rpm/redhat/brp-python-hardlink + /usr/bin/add-determinism --brp -j4 /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/atomic.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/subset.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/segment.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/atomgroup.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/flags.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/residue.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/selection.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/nbexclusion.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/improper.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/pointer.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/hierview.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/crossterm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/chain.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/fields.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/functions.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/fields.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/bond.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/donor.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/atom.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/dihedral.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/atommap.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/acceptor.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/angle.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/uniprot.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/quartataweb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/dali.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/pfam.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/cath.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/database/__pycache__/goa.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/functions.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/plotting.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/signature.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/vmdfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/sampling.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/rtb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/perturb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/functions.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/nma.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/entropy.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/pca.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/editing.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/modeset.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/exgnm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/nmdfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/mode.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/compare.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/exanm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/imanm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/mechstiff.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/compare.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/bildfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/heatmapper.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/bbenm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/gnm.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/clustenm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/anm.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/gnm.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/essa.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/anm.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/gamma.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/analysis.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/gamma.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/analysis.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/dynamics/__pycache__/adaptive.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__pycache__/pdbensemble.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__pycache__/functions.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__pycache__/functions.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__pycache__/ensemble.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__pycache__/conformation.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/ensemble/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree/__pycache__/kdtree.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/kdtree/__pycache__/kdtree.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/__pycache__/transform.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/__pycache__/measure.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/__pycache__/measure.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/measure/__pycache__/contacts.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/pdbfile.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/wwpdb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/pdbfile.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/waterbridges.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/pdbclusters.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/pdbclusters.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/compare.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/compare.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/stride.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/localpdb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/stride.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/functions.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/starfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/header.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/fixer.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/cifheader.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/emdfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/blastpdb.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/blastpdb.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/dssp.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/dssp.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/ciffile.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/proteins/__pycache__/ciffile.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/sequence.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/msa.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/msafile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/plotting.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/msa.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/trajfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/sequence/__pycache__/analysis.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/trajectory.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/trajectory.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/frame.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/trajbase.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/dcdfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/psffile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/trajectory/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/straw.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/norm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/hic.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/hic.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/functions.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/cluster.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/chromatin/__pycache__/functions.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/__pycache__/functions.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/__pycache__/ccd.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/__pycache__/pdbligands.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/__pycache__/bird.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/compounds/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition/__pycache__/spectrus.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/domain_decomposition/__pycache__/spectrus.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/settings.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/seqtools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/logger.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/logger.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/pathtools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/legacy.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/checkers.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/laptools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/misctools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/catchall.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/eigtools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/doctools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/drawtools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/utilities/__pycache__/TreeConstruction.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/__pycache__/apptools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_contacts.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_gnm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_biomol.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_select.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_clustenm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_anm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_pca.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_fetch.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_energy.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_align.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_blast.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_catdcd.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/prody_eda.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/prody_apps/__pycache__/nmaoptions.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_conserv.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_search.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_coevol.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_refine.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_occupancy.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_rankorder.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_merge.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_filter.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/apps/evol_apps/__pycache__/evol_fetch.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__pycache__/test_prody_pca.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__pycache__/test_prody_gnm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__pycache__/test_prody_anm.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__pycache__/test_prody_examples.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/test_subset.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/apps/__pycache__/test_prody_catdcd.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/test_fragment.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/test_select.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/test_atommap.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/test_hierview.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles/__pycache__/__init__.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/datafiles/__pycache__/__init__.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/atomic/__pycache__/test_atomic.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__pycache__/test_signature.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__pycache__/test_pca.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__pycache__/test_signature.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__pycache__/test_editing.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/dynamics/__pycache__/test_enms.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__pycache__/test_functions.cpython-313.opt-1.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__pycache__/test_functions.cpython-313.pyc: replacing with normalized version /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__pycache__/test_pdbensemble.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__pycache__/test_ensemble.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/ensemble/__pycache__/test_conformation.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/kdtree/__pycache__/test_kdtree.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/__pycache__/test_measure.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/__pycache__/test_transform.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/__pycache__/test_contacts.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/measure/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/test_ciffile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/test_pdbfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/test_localpdb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/test_header.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/test_wwpdb.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/proteins/__pycache__/test_dssp.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/__pycache__/test_msa.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/__pycache__/test_sequence.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/__pycache__/test_msafile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory/__pycache__/test_dcdfile.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/trajectory/__pycache__/test_frame.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/sequence/__pycache__/test_analysis.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/__pycache__/test_pathtools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/__pycache__/test_misctools.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/__pycache__/test_checkers.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/tests/utilities/__pycache__/__init__.cpython-313.opt-1.pyc: rewriting with normalized contents /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/lib64/python3.13/site-packages/prody/atomic/__pycache__/select.cpython-313.opt-1.pyc: rewriting with normalized contents Scanned 89 directories and 714 files, processed 233 inodes, 233 modified (52 replaced + 181 rewritten), 0 unsupported format, 0 errors Reading /builddir/build/BUILD/ProDy-2.4.1-build/SPECPARTS/rpm-debuginfo.specpart Processing files: python3-ProDy-2.4.1-5.fc42.aarch64 Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.yWs3yL + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd ProDy-2.4.1 + DOCDIR=/builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/doc/python3-ProDy + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/doc/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/README.rst /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/doc/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.4f4ojy + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + cd ProDy-2.4.1 + LICENSEDIR=/builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/licenses/python3-ProDy + export LC_ALL=C.UTF-8 + LC_ALL=C.UTF-8 + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/licenses/python3-ProDy + cp -pr /builddir/build/BUILD/ProDy-2.4.1-build/ProDy-2.4.1/LICENSE.rst /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT/usr/share/licenses/python3-ProDy + RPM_EC=0 ++ jobs -p + exit 0 warning: absolute symlink: /usr/bin/evol-3.13 -> /usr/bin/python3.13-evol warning: absolute symlink: /usr/bin/prody-3.13 -> /usr/bin/python3.13-prody Provides: ProDy = 0:2.4.1-5.fc42 python-ProDy = 2.4.1-5.fc42 python3-ProDy = 2.4.1-5.fc42 python3-ProDy(aarch-64) = 2.4.1-5.fc42 python3.13-ProDy = 2.4.1-5.fc42 python3.13dist(prody) = 2.4.1 python3dist(prody) = 2.4.1 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: /usr/bin/python3 python(abi) = 3.13 python3.13dist(biopython) python3.13dist(numpy) >= 1.10 python3.13dist(pyparsing) python3.13dist(scipy) python3.13dist(setuptools) Obsoletes: python-ProDy < 2.4.1-5.fc42 Processing files: ProDy-debugsource-2.4.1-5.fc42.aarch64 Provides: ProDy-debugsource = 2.4.1-5.fc42 ProDy-debugsource(aarch-64) = 2.4.1-5.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: python3-ProDy-debuginfo-2.4.1-5.fc42.aarch64 Provides: debuginfo(build-id) = 0f9170803d0aeb5c8504149597587d80f803cc9d debuginfo(build-id) = c2a807e87705655bfe2a3fff0e08fc3212f339fc debuginfo(build-id) = c73365dde5a9fd507d6d0958e692ca49292368de debuginfo(build-id) = e764193e91e5a4ea09e8cef1c1c58bd194372941 debuginfo(build-id) = e8fff7cbf2eedeec02a96a592f2b0ce237a9f750 debuginfo(build-id) = ef0a92b07e215822213c12a717f73af9bdc55c22 debuginfo(build-id) = f7d4de005f27b933dc0e7a6d97dcc8d074ba3891 python-ProDy-debuginfo = 2.4.1-5.fc42 python3-ProDy-debuginfo = 2.4.1-5.fc42 python3-ProDy-debuginfo(aarch-64) = 2.4.1-5.fc42 python3.13-ProDy-debuginfo = 2.4.1-5.fc42 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Recommends: ProDy-debugsource(aarch-64) = 2.4.1-5.fc42 Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILD/ProDy-2.4.1-build/BUILDROOT Wrote: /builddir/build/RPMS/ProDy-debugsource-2.4.1-5.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-debuginfo-2.4.1-5.fc42.aarch64.rpm Wrote: /builddir/build/RPMS/python3-ProDy-2.4.1-5.fc42.aarch64.rpm Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.TAkkp3 + umask 022 + cd /builddir/build/BUILD/ProDy-2.4.1-build + test -d /builddir/build/BUILD/ProDy-2.4.1-build + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w /builddir/build/BUILD/ProDy-2.4.1-build + rm -rf /builddir/build/BUILD/ProDy-2.4.1-build + RPM_EC=0 ++ jobs -p + exit 0 RPM build warnings: absolute symlink: /usr/bin/evol-3.13 -> /usr/bin/python3.13-evol absolute symlink: /usr/bin/prody-3.13 -> /usr/bin/python3.13-prody Finish: rpmbuild ProDy-2.4.1-5.fc42.src.rpm Finish: build phase for ProDy-2.4.1-5.fc42.src.rpm INFO: chroot_scan: 1 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-rawhide-aarch64-1728337787.657920/root/var/log/dnf5.log INFO: Done(/var/lib/copr-rpmbuild/results/ProDy-2.4.1-5.fc42.src.rpm) Config(child) 1 minutes 55 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "python3-ProDy-debuginfo", "epoch": null, "version": "2.4.1", "release": "5.fc42", "arch": "aarch64" }, { "name": "ProDy-debugsource", "epoch": null, "version": "2.4.1", "release": "5.fc42", "arch": "aarch64" }, { "name": "python3-ProDy", "epoch": null, "version": "2.4.1", "release": "5.fc42", "arch": "aarch64" }, { "name": "ProDy", "epoch": null, "version": "2.4.1", "release": "5.fc42", "arch": "src" } ] } RPMResults finished