Warning: Permanently added '52.117.126.238' (ED25519) to the list of known hosts. You can reproduce this build on your computer by running: sudo dnf install copr-rpmbuild /usr/bin/copr-rpmbuild --verbose --drop-resultdir --task-url https://copr.fedorainfracloud.org/backend/get-build-task/6866244-fedora-39-s390x --chroot fedora-39-s390x Version: 0.70 PID: 7187 Logging PID: 7188 Task: {'appstream': False, 'background': True, 'build_id': 6866244, 'buildroot_pkgs': [], 'chroot': 'fedora-39-s390x', 'enable_net': False, 'fedora_review': False, 'git_hash': '3734efb5d044bf034ddf1351e8b0e44c472c34f6', 'git_repo': 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/snakemake', 'isolation': 'default', 'memory_reqs': 2048, 'package_name': 'snakemake', 'package_version': '7.32.4-3', 'project_dirname': 'openblas-0.3.23', 'project_name': 'openblas-0.3.23', 'project_owner': 'psimovec', 'repo_priority': None, 'repos': [{'baseurl': 'https://download.copr.fedorainfracloud.org/results/psimovec/openblas-0.3.23/fedora-39-s390x/', 'id': 'copr_base', 'name': 'Copr repository', 'priority': None}, {'baseurl': 'http://kojipkgs.fedoraproject.org/repos/rawhide/latest/$basearch/', 'id': 'http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch', 'name': 'Additional repo http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch'}], 'sandbox': 'psimovec/openblas-0.3.23--https://src.fedoraproject.org/user/music', 'source_json': {}, 'source_type': None, 'submitter': 'https://src.fedoraproject.org/user/music', 'tags': [], 'task_id': '6866244-fedora-39-s390x', 'timeout': 18000, 'uses_devel_repo': False, 'with_opts': [], 'without_opts': []} Running: git clone https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/snakemake /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake --depth 500 --no-single-branch --recursive cmd: ['git', 'clone', 'https://copr-dist-git.fedorainfracloud.org/git/psimovec/openblas-0.3.23/snakemake', '/var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake', '--depth', '500', '--no-single-branch', '--recursive'] cwd: . rc: 0 stdout: stderr: Cloning into '/var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake'... Running: git checkout 3734efb5d044bf034ddf1351e8b0e44c472c34f6 -- cmd: ['git', 'checkout', '3734efb5d044bf034ddf1351e8b0e44c472c34f6', '--'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake rc: 0 stdout: stderr: Note: switching to '3734efb5d044bf034ddf1351e8b0e44c472c34f6'. You are in 'detached HEAD' state. You can look around, make experimental changes and commit them, and you can discard any commits you make in this state without impacting any branches by switching back to a branch. If you want to create a new branch to retain commits you create, you may do so (now or later) by using -c with the switch command. Example: git switch -c Or undo this operation with: git switch - Turn off this advice by setting config variable advice.detachedHead to false HEAD is now at 3734efb automatic import of snakemake Running: copr-distgit-client sources /usr/bin/tail: /var/lib/copr-rpmbuild/main.log: file truncated cmd: ['copr-distgit-client', 'sources'] cwd: /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake rc: 0 stdout: stderr: INFO: Reading stdout from command: git rev-parse --abbrev-ref HEAD INFO: Reading stdout from command: git rev-parse HEAD INFO: Reading sources specification file: sources INFO: Downloading snakemake-7.32.4.tar.gz INFO: Reading stdout from command: curl --help all INFO: Calling: curl -H Pragma: -o snakemake-7.32.4.tar.gz --location --connect-timeout 60 --retry 3 --retry-delay 10 --remote-time --show-error --fail --retry-all-errors https://copr-dist-git.fedorainfracloud.org/repo/pkgs/psimovec/openblas-0.3.23/snakemake/snakemake-7.32.4.tar.gz/md5/2d7cd0faf40a8ca3c6e47f214536d1c9/snakemake-7.32.4.tar.gz % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 100 8677k 100 8677k 0 0 39.2M 0 --:--:-- --:--:-- --:--:-- 39.2M INFO: Reading stdout from command: md5sum snakemake-7.32.4.tar.gz Running (timeout=18000): unbuffer mock --spec /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1704460468.318683 -r /var/lib/copr-rpmbuild/results/configs/child.cfg INFO: mock.py version 5.4 starting (python version = 3.11.3, NVR = mock-5.4-1.fc38), args: /usr/libexec/mock/mock --spec /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake/snakemake.spec --sources /var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake --resultdir /var/lib/copr-rpmbuild/results --uniqueext 1704460468.318683 -r /var/lib/copr-rpmbuild/results/configs/child.cfg Start(bootstrap): init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish(bootstrap): init plugins Start: init plugins INFO: tmpfs initialized INFO: selinux enabled INFO: chroot_scan: initialized INFO: compress_logs: initialized Finish: init plugins INFO: Signal handler active Start: run INFO: Start(/var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake/snakemake.spec) Config(fedora-39-s390x) Start: clean chroot Finish: clean chroot Mock Version: 5.4 INFO: Mock Version: 5.4 Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1704460468.318683/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata INFO: Guessed host environment type: unknown INFO: Using bootstrap image: registry.fedoraproject.org/fedora:39 INFO: Pulling image: registry.fedoraproject.org/fedora:39 INFO: Copy content of container registry.fedoraproject.org/fedora:39 to /var/lib/mock/fedora-39-s390x-bootstrap-1704460468.318683/root INFO: Checking that registry.fedoraproject.org/fedora:39 image matches host's architecture INFO: mounting registry.fedoraproject.org/fedora:39 with podman image mount INFO: image registry.fedoraproject.org/fedora:39 as /var/lib/containers/storage/overlay/8762d4e942255ae5f22c1ca5cdcbea9118d53523b90ef15d705fc17a7574e0a0/merged INFO: umounting image registry.fedoraproject.org/fedora:39 (/var/lib/containers/storage/overlay/8762d4e942255ae5f22c1ca5cdcbea9118d53523b90ef15d705fc17a7574e0a0/merged) with podman image umount INFO: Package manager dnf detected and used (fallback) INFO: Bootstrap image not marked ready Start(bootstrap): installing dnf tooling No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 1.5 MB/s | 15 MB 00:10 Additional repo http_kojipkgs_fedoraproject_org 239 MB/s | 66 MB 00:00 fedora 62 MB/s | 79 MB 00:01 updates 3.4 MB/s | 21 MB 00:06 Last metadata expiration check: 0:00:07 ago on Fri Jan 5 13:15:49 2024. Package python3-dnf-4.18.1-2.fc39.noarch is already installed. Dependencies resolved. ========================================================================================================================= Package Arch Version Repository Size ========================================================================================================================= Installing: python3-dnf-plugins-core noarch 4.4.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 302 k Upgrading: dnf noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 496 k dnf-data noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k python3-dnf noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 549 k yum noarch 4.18.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k Installing dependencies: dbus-libs s390x 1:1.14.10-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 159 k python3-dateutil noarch 1:2.8.2-11.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 345 k python3-dbus s390x 1.3.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 147 k python3-distro noarch 1.8.0-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 44 k python3-six noarch 1.16.0-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 41 k python3-systemd s390x 235-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 100 k Transaction Summary ========================================================================================================================= Install 7 Packages Upgrade 4 Packages Total download size: 2.2 M Downloading Packages: (1/11): python3-dbus-1.3.2-4.fc39.s390x.rpm 4.4 MB/s | 147 kB 00:00 (2/11): python3-distro-1.8.0-6.fc39.noarch.rpm 5.6 MB/s | 44 kB 00:00 (3/11): python3-dateutil-2.8.2-11.fc40.noarch.r 7.4 MB/s | 345 kB 00:00 (4/11): dbus-libs-1.14.10-1.fc40.s390x.rpm 3.1 MB/s | 159 kB 00:00 (5/11): python3-six-1.16.0-12.fc39.noarch.rpm 8.5 MB/s | 41 kB 00:00 (6/11): python3-dnf-plugins-core-4.4.4-1.fc40.n 20 MB/s | 302 kB 00:00 (7/11): python3-systemd-235-5.fc39.s390x.rpm 13 MB/s | 100 kB 00:00 (8/11): dnf-data-4.18.2-1.fc40.noarch.rpm 8.4 MB/s | 39 kB 00:00 (9/11): yum-4.18.2-1.fc40.noarch.rpm 8.0 MB/s | 37 kB 00:00 (10/11): dnf-4.18.2-1.fc40.noarch.rpm 22 MB/s | 496 kB 00:00 (11/11): python3-dnf-4.18.2-1.fc40.noarch.rpm 31 MB/s | 549 kB 00:00 -------------------------------------------------------------------------------- Total 29 MB/s | 2.2 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Upgrading : dnf-data-4.18.2-1.fc40.noarch 1/15 Upgrading : python3-dnf-4.18.2-1.fc40.noarch 2/15 Upgrading : dnf-4.18.2-1.fc40.noarch 3/15 Running scriptlet: dnf-4.18.2-1.fc40.noarch 3/15 Installing : python3-systemd-235-5.fc39.s390x 4/15 Installing : python3-six-1.16.0-12.fc39.noarch 5/15 Installing : python3-dateutil-1:2.8.2-11.fc40.noarch 6/15 Installing : python3-distro-1.8.0-6.fc39.noarch 7/15 Installing : dbus-libs-1:1.14.10-1.fc40.s390x 8/15 Installing : python3-dbus-1.3.2-4.fc39.s390x 9/15 Installing : python3-dnf-plugins-core-4.4.4-1.fc40.noarch 10/15 Upgrading : yum-4.18.2-1.fc40.noarch 11/15 Cleanup : yum-4.18.1-2.fc39.noarch 12/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : dnf-4.18.1-2.fc39.noarch 13/15 Running scriptlet: dnf-4.18.1-2.fc39.noarch 13/15 Cleanup : python3-dnf-4.18.1-2.fc39.noarch 14/15 Cleanup : dnf-data-4.18.1-2.fc39.noarch 15/15 Running scriptlet: dnf-data-4.18.1-2.fc39.noarch 15/15 Verifying : dbus-libs-1:1.14.10-1.fc40.s390x 1/15 Verifying : python3-dateutil-1:2.8.2-11.fc40.noarch 2/15 Verifying : python3-dbus-1.3.2-4.fc39.s390x 3/15 Verifying : python3-distro-1.8.0-6.fc39.noarch 4/15 Verifying : python3-dnf-plugins-core-4.4.4-1.fc40.noarch 5/15 Verifying : python3-six-1.16.0-12.fc39.noarch 6/15 Verifying : python3-systemd-235-5.fc39.s390x 7/15 Verifying : dnf-4.18.2-1.fc40.noarch 8/15 Verifying : dnf-4.18.1-2.fc39.noarch 9/15 Verifying : dnf-data-4.18.2-1.fc40.noarch 10/15 Verifying : dnf-data-4.18.1-2.fc39.noarch 11/15 Verifying : python3-dnf-4.18.2-1.fc40.noarch 12/15 Verifying : python3-dnf-4.18.1-2.fc39.noarch 13/15 Verifying : yum-4.18.2-1.fc40.noarch 14/15 Verifying : yum-4.18.1-2.fc39.noarch 15/15 Upgraded: dnf-4.18.2-1.fc40.noarch dnf-data-4.18.2-1.fc40.noarch python3-dnf-4.18.2-1.fc40.noarch yum-4.18.2-1.fc40.noarch Installed: dbus-libs-1:1.14.10-1.fc40.s390x python3-dateutil-1:2.8.2-11.fc40.noarch python3-dbus-1.3.2-4.fc39.s390x python3-distro-1.8.0-6.fc39.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch python3-six-1.16.0-12.fc39.noarch python3-systemd-235-5.fc39.s390x Complete! Finish(bootstrap): installing dnf tooling Start(bootstrap): creating root cache Finish(bootstrap): creating root cache Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-1704460468.318683/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Package manager dnf detected and used (direct choice) INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.s390x rpm-sequoia-1.5.0-1.fc39.s390x python3-dnf-4.18.2-1.fc40.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch yum-4.18.2-1.fc40.noarch Start: installing minimal buildroot with dnf No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 1.5 MB/s | 15 MB 00:10 Additional repo http_kojipkgs_fedoraproject_org 12 MB/s | 66 MB 00:05 fedora 52 MB/s | 79 MB 00:01 updates 3.7 MB/s | 21 MB 00:05 Last metadata expiration check: 0:00:07 ago on Fri Jan 5 13:17:17 2024. Dependencies resolved. ======================================================================================================================================== Package Arch Version Repository Size ======================================================================================================================================== Installing group/module packages: bash s390x 5.2.21-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.8 M bzip2 s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 53 k coreutils s390x 9.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M cpio s390x 2.14-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 276 k diffutils s390x 3.10-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 398 k fedora-release-common noarch 40-0.26 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20 k findutils s390x 1:4.9.0-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 488 k gawk s390x 5.2.2-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M glibc-minimal-langpack s390x 2.38.9000-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 89 k grep s390x 3.11-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 294 k gzip s390x 1.12-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 166 k info s390x 7.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 195 k patch s390x 2.7.6-22.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 134 k redhat-rpm-config noarch 274-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 74 k rpm-build s390x 4.19.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 71 k sed s390x 4.8-14.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 300 k shadow-utils s390x 2:4.14.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.2 M tar s390x 2:1.35-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 865 k unzip s390x 6.0-62.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 194 k util-linux s390x 2.39.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.1 M which s390x 2.21-40.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 43 k xz s390x 5.4.5-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 532 k Installing dependencies: alternatives s390x 1.25-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k ansible-srpm-macros noarch 1-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 21 k audit-libs s390x 3.1.2-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 121 k authselect s390x 1.4.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144 k authselect-libs s390x 1.4.3-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 234 k basesystem noarch 11-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 7.2 k binutils s390x 2.41-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 6.0 M binutils-gold s390x 2.41-20.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M bzip2-libs s390x 1.0.8-16.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 46 k ca-certificates noarch 2023.2.62_v7.0.401-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 863 k coreutils-common s390x 9.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.1 M cracklib s390x 2.9.11-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 83 k crypto-policies noarch 20231204-1.git1e3a2e4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 69 k curl s390x 8.5.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 372 k cyrus-sasl-lib s390x 2.1.28-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 819 k debugedit s390x 5.0-12.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 81 k dwz s390x 0.15-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 144 k ed s390x 1.19-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 80 k efi-srpm-macros noarch 5-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k elfutils s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 571 k elfutils-debuginfod-client s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 38 k elfutils-default-yama-scope noarch 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 13 k elfutils-libelf s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 200 k elfutils-libs s390x 0.190-4.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 276 k 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(31/153): fedora-release-40-0.26.noarch.rpm 2.1 MB/s | 9.7 kB 00:00 (32/153): fedora-release-common-40-0.26.noarch. 4.2 MB/s | 20 kB 00:00 (33/153): fedora-release-identity-basic-40-0.26 2.3 MB/s | 11 kB 00:00 (34/153): fedora-repos-40-0.2.noarch.rpm 2.1 MB/s | 9.3 kB 00:00 (35/153): fedora-repos-rawhide-40-0.2.noarch.rp 2.0 MB/s | 8.9 kB 00:00 (36/153): file-5.45-1.fc40.s390x.rpm 6.5 MB/s | 49 kB 00:00 (37/153): file-libs-5.45-1.fc40.s390x.rpm 94 MB/s | 769 kB 00:00 (38/153): filesystem-3.18-6.fc39.s390x.rpm 120 MB/s | 1.1 MB 00:00 (39/153): findutils-4.9.0-6.fc40.s390x.rpm 55 MB/s | 488 kB 00:00 (40/153): fonts-srpm-macros-2.0.5-12.fc39.noarc 4.6 MB/s | 26 kB 00:00 (41/153): fpc-srpm-macros-1.3-8.fc39.noarch.rpm 1.7 MB/s | 7.4 kB 00:00 (42/153): forge-srpm-macros-0.2.0-1.fc40.noarch 1.5 MB/s | 18 kB 00:00 (43/153): gawk-5.2.2-2.fc39.s390x.rpm 88 MB/s | 1.1 MB 00:00 (44/153): gdbm-1.23-4.fc39.s390x.rpm 16 MB/s | 151 kB 00:00 (45/153): gdbm-libs-1.23-4.fc39.s390x.rpm 11 MB/s | 58 kB 00:00 (46/153): ghc-srpm-macros-1.6.1-3.fc40.noarch.r 1.7 MB/s | 8.1 kB 00:00 (47/153): glibc-2.38.9000-30.fc40.s390x.rpm 171 MB/s | 1.9 MB 00:00 (48/153): glibc-common-2.38.9000-30.fc40.s390x. 43 MB/s | 384 kB 00:00 (49/153): glibc-minimal-langpack-2.38.9000-30.f 18 MB/s | 89 kB 00:00 (50/153): glibc-gconv-extra-2.38.9000-30.fc40.s 132 MB/s | 1.7 MB 00:00 (51/153): gmp-6.2.1-5.fc39.s390x.rpm 44 MB/s | 325 kB 00:00 (52/153): gnat-srpm-macros-6-3.fc39.noarch.rpm 2.0 MB/s | 8.8 kB 00:00 (53/153): go-srpm-macros-3.3.1-1.fc40.noarch.rp 6.2 MB/s | 28 kB 00:00 (54/153): grep-3.11-5.fc40.s390x.rpm 46 MB/s | 294 kB 00:00 (55/153): gzip-1.12-6.fc39.s390x.rpm 27 MB/s | 166 kB 00:00 (56/153): jansson-2.13.1-7.fc39.s390x.rpm 8.8 MB/s | 44 kB 00:00 (57/153): info-7.1-1.fc40.s390x.rpm 33 MB/s | 195 kB 00:00 (58/153): keyutils-libs-1.6.3-1.fc40.s390x.rpm 6.9 MB/s | 31 kB 00:00 (59/153): kernel-srpm-macros-1.0-20.fc39.noarch 1.3 MB/s | 10 kB 00:00 (60/153): krb5-libs-1.21.2-2.fc40.s390x.rpm 96 MB/s | 775 kB 00:00 (61/153): libacl-2.3.1-11.fc40.s390x.rpm 4.3 MB/s | 25 kB 00:00 (62/153): libattr-2.5.1-9.fc40.s390x.rpm 3.9 MB/s | 18 kB 00:00 (63/153): libarchive-3.7.2-1.fc40.s390x.rpm 65 MB/s | 440 kB 00:00 (64/153): libblkid-2.39.3-1.fc40.s390x.rpm 21 MB/s | 120 kB 00:00 (65/153): libbrotli-1.1.0-1.fc40.s390x.rpm 59 MB/s | 379 kB 00:00 (66/153): libcap-2.69-1.fc40.s390x.rpm 15 MB/s | 85 kB 00:00 (67/153): libcap-ng-0.8.4-2.fc40.s390x.rpm 6.8 MB/s | 33 kB 00:00 (68/153): libcom_err-1.47.0-2.fc39.s390x.rpm 5.5 MB/s | 26 kB 00:00 (69/153): libcurl-8.5.0-1.fc40.s390x.rpm 61 MB/s | 362 kB 00:00 (70/153): libeconf-0.5.2-1.fc40.s390x.rpm 6.3 MB/s | 32 kB 00:00 (71/153): libevent-2.1.12-9.fc39.s390x.rpm 44 MB/s | 260 kB 00:00 (72/153): libfdisk-2.39.3-1.fc40.s390x.rpm 30 MB/s | 165 kB 00:00 (73/153): libffi-3.4.4-5.fc40.s390x.rpm 6.3 MB/s | 35 kB 00:00 (74/153): libgcc-13.2.1-6.fc40.s390x.rpm 15 MB/s | 85 kB 00:00 (75/153): libgomp-13.2.1-6.fc40.s390x.rpm 50 MB/s | 325 kB 00:00 (76/153): libidn2-2.3.4-3.fc39.s390x.rpm 21 MB/s | 111 kB 00:00 (77/153): libmount-2.39.3-1.fc40.s390x.rpm 26 MB/s | 158 kB 00:00 (78/153): libnghttp2-1.58.0-1.fc40.s390x.rpm 15 MB/s | 78 kB 00:00 (79/153): libpkgconf-1.9.5-2.fc39.s390x.rpm 8.6 MB/s | 38 kB 00:00 (80/153): libnsl2-2.0.0-6.fc39.s390x.rpm 6.0 MB/s | 30 kB 00:00 (81/153): libpwquality-1.4.5-6.fc39.s390x.rpm 13 MB/s | 109 kB 00:00 (82/153): libpsl-0.21.2-4.fc39.s390x.rpm 6.6 MB/s | 63 kB 00:00 (83/153): libsemanage-3.6-1.fc40.s390x.rpm 24 MB/s | 119 kB 00:00 (84/153): libselinux-3.6-2.fc40.s390x.rpm 16 MB/s | 92 kB 00:00 (85/153): libsigsegv-2.14-5.fc39.s390x.rpm 5.8 MB/s | 27 kB 00:00 (86/153): libsepol-3.6-1.fc40.s390x.rpm 56 MB/s | 346 kB 00:00 (87/153): libsmartcols-2.39.3-1.fc40.s390x.rpm 14 MB/s | 70 kB 00:00 (88/153): libssh-0.10.6-2.fc40.s390x.rpm 36 MB/s | 209 kB 00:00 (89/153): libssh-config-0.10.6-2.fc40.noarch.rp 2.1 MB/s | 9.1 kB 00:00 (90/153): libstdc++-13.2.1-6.fc40.s390x.rpm 118 MB/s | 953 kB 00:00 (91/153): libtasn1-4.19.0-3.fc39.s390x.rpm 14 MB/s | 77 kB 00:00 (92/153): libtirpc-1.3.4-1.rc1.fc40.s390x.rpm 18 MB/s | 96 kB 00:00 (93/153): libunistring-1.1-5.fc40.s390x.rpm 83 MB/s | 556 kB 00:00 (94/153): libutempter-1.2.1-10.fc39.s390x.rpm 5.4 MB/s | 26 kB 00:00 (95/153): libuuid-2.39.3-1.fc40.s390x.rpm 6.6 MB/s | 28 kB 00:00 (96/153): libverto-0.3.2-6.fc39.s390x.rpm 2.5 MB/s | 21 kB 00:00 (97/153): libxcrypt-4.4.36-3.fc40.s390x.rpm 16 MB/s | 123 kB 00:00 (98/153): libzstd-1.5.5-4.fc39.s390x.rpm 54 MB/s | 342 kB 00:00 (99/153): libxml2-2.12.3-1.fc40.s390x.rpm 86 MB/s | 705 kB 00:00 (100/153): lua-libs-5.4.6-3.fc39.s390x.rpm 26 MB/s | 142 kB 00:00 (101/153): lua-srpm-macros-1-9.fc39.noarch.rpm 1.8 MB/s | 8.6 kB 00:00 (102/153): lz4-libs-1.9.4-4.fc39.s390x.rpm 16 MB/s | 81 kB 00:00 (103/153): mpfr-4.2.1-1.fc40.s390x.rpm 53 MB/s | 297 kB 00:00 (104/153): ncurses-base-6.4-8.20231001.fc40.noa 12 MB/s | 63 kB 00:00 (105/153): ncurses-libs-6.4-8.20231001.fc40.s39 58 MB/s | 362 kB 00:00 (106/153): openblas-srpm-macros-2-14.fc39.noarc 1.7 MB/s | 7.5 kB 00:00 (107/153): ocaml-srpm-macros-9-1.fc40.noarch.rp 1.2 MB/s | 9.0 kB 00:00 (108/153): openldap-2.6.6-1.fc39.s390x.rpm 42 MB/s | 262 kB 00:00 (109/153): openssl-libs-3.1.4-1.fc40.s390x.rpm 149 MB/s | 1.9 MB 00:00 (110/153): p11-kit-0.25.3-1.fc40.s390x.rpm 58 MB/s | 519 kB 00:00 (111/153): package-notes-srpm-macros-0.5-9.fc39 2.5 MB/s | 11 kB 00:00 (112/153): p11-kit-trust-0.25.3-1.fc40.s390x.rp 23 MB/s | 142 kB 00:00 (113/153): pam-1.5.3-9.fc40.s390x.rpm 75 MB/s | 520 kB 00:00 (114/153): pam-libs-1.5.3-9.fc40.s390x.rpm 11 MB/s | 59 kB 00:00 (115/153): patch-2.7.6-22.fc39.s390x.rpm 24 MB/s | 134 kB 00:00 (116/153): pcre2-10.42-2.fc40.s390x.rpm 40 MB/s | 250 kB 00:00 (117/153): perl-srpm-macros-1-51.fc39.noarch.rp 1.8 MB/s | 8.0 kB 00:00 (118/153): pcre2-syntax-10.42-2.fc40.noarch.rpm 25 MB/s | 143 kB 00:00 (119/153): pkgconf-1.9.5-2.fc39.s390x.rpm 7.9 MB/s | 43 kB 00:00 (120/153): pkgconf-m4-1.9.5-2.fc39.noarch.rpm 2.9 MB/s | 14 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rpm-sequoia-1.5.0-2.fc40.s390x.rpm 71 MB/s | 1.0 MB 00:00 (136/153): sed-4.8-14.fc39.s390x.rpm 31 MB/s | 300 kB 00:00 (137/153): setup-2.14.5-1.fc40.noarch.rpm 26 MB/s | 148 kB 00:00 (138/153): shadow-utils-4.14.0-2.fc40.s390x.rpm 106 MB/s | 1.2 MB 00:00 (139/153): sqlite-libs-3.44.2-1.fc40.s390x.rpm 80 MB/s | 742 kB 00:00 (140/153): systemd-libs-255.1-1.fc40.s390x.rpm 82 MB/s | 711 kB 00:00 (141/153): tar-1.35-2.fc40.s390x.rpm 88 MB/s | 865 kB 00:00 (142/153): unzip-6.0-62.fc39.s390x.rpm 35 MB/s | 194 kB 00:00 (143/153): util-linux-2.39.3-1.fc40.s390x.rpm 131 MB/s | 1.1 MB 00:00 (144/153): util-linux-core-2.39.3-1.fc40.s390x. 61 MB/s | 497 kB 00:00 (145/153): which-2.21-40.fc39.s390x.rpm 8.0 MB/s | 43 kB 00:00 (146/153): xxhash-libs-0.8.2-1.fc39.s390x.rpm 7.8 MB/s | 37 kB 00:00 (147/153): xz-5.4.5-1.fc40.s390x.rpm 74 MB/s | 532 kB 00:00 (148/153): xz-libs-5.4.5-1.fc40.s390x.rpm 22 MB/s | 114 kB 00:00 (149/153): zig-srpm-macros-1-1.fc40.noarch.rpm 1.6 MB/s | 8.0 kB 00:00 (150/153): zip-3.0-39.fc40.s390x.rpm 44 MB/s | 283 kB 00:00 (151/153): zlib-ng-compat-2.1.5-1.fc40.s390x.rp 14 MB/s | 68 kB 00:00 (152/153): zstd-1.5.5-4.fc39.s390x.rpm 61 MB/s | 506 kB 00:00 (153/153): gdb-minimal-14.1-1.fc40.s390x.rpm 615 kB/s | 4.1 MB 00:06 -------------------------------------------------------------------------------- Total 7.5 MB/s | 52 MB 00:06 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Running scriptlet: filesystem-3.18-6.fc39.s390x 1/1 Preparing : 1/1 Installing : libgcc-13.2.1-6.fc40.s390x 1/153 Running scriptlet: libgcc-13.2.1-6.fc40.s390x 1/153 Installing : crypto-policies-20231204-1.git1e3a2e4.fc40.noarc 2/153 Running scriptlet: crypto-policies-20231204-1.git1e3a2e4.fc40.noarc 2/153 Installing : fedora-release-identity-basic-40-0.26.noarch 3/153 Installing : fedora-repos-rawhide-40-0.2.noarch 4/153 Installing : fedora-gpg-keys-40-0.2.noarch 5/153 Installing : fedora-repos-40-0.2.noarch 6/153 Installing : fedora-release-common-40-0.26.noarch 7/153 Installing : fedora-release-40-0.26.noarch 8/153 Installing : setup-2.14.5-1.fc40.noarch 9/153 warning: /etc/hosts created as /etc/hosts.rpmnew Running scriptlet: setup-2.14.5-1.fc40.noarch 9/153 Installing : filesystem-3.18-6.fc39.s390x 10/153 Installing : basesystem-11-18.fc39.noarch 11/153 Installing : rust-srpm-macros-25.2-2.fc40.noarch 12/153 Installing : qt6-srpm-macros-6.6.1-3.fc40.noarch 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Installing : bash-5.2.21-2.fc40.s390x 28/153 Running scriptlet: bash-5.2.21-2.fc40.s390x 28/153 Installing : zlib-ng-compat-2.1.5-1.fc40.s390x 29/153 Installing : xz-libs-5.4.5-1.fc40.s390x 30/153 Installing : bzip2-libs-1.0.8-16.fc39.s390x 31/153 Installing : readline-8.2-4.fc39.s390x 32/153 Installing : libstdc++-13.2.1-6.fc40.s390x 33/153 Installing : libuuid-2.39.3-1.fc40.s390x 34/153 Installing : libzstd-1.5.5-4.fc39.s390x 35/153 Installing : elfutils-libelf-0.190-4.fc40.s390x 36/153 Installing : popt-1.19-3.fc39.s390x 37/153 Installing : libblkid-2.39.3-1.fc40.s390x 38/153 Installing : gmp-1:6.2.1-5.fc39.s390x 39/153 Installing : libattr-2.5.1-9.fc40.s390x 40/153 Installing : libacl-2.3.1-11.fc40.s390x 41/153 Installing : libxcrypt-4.4.36-3.fc40.s390x 42/153 Installing : gdbm-libs-1:1.23-4.fc39.s390x 43/153 Installing : libeconf-0.5.2-1.fc40.s390x 44/153 Installing : lz4-libs-1.9.4-4.fc39.s390x 45/153 Installing : mpfr-4.2.1-1.fc40.s390x 46/153 Installing : dwz-0.15-3.fc39.s390x 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elfutils-default-yama-scope-0.190-4.fc40.noarch 88/153 Running scriptlet: elfutils-default-yama-scope-0.190-4.fc40.noarch 88/153 Installing : cpio-2.14-5.fc40.s390x 89/153 Installing : diffutils-3.10-3.fc39.s390x 90/153 Installing : keyutils-libs-1.6.3-1.fc40.s390x 91/153 Installing : libbrotli-1.1.0-1.fc40.s390x 92/153 Installing : libffi-3.4.4-5.fc40.s390x 93/153 Installing : p11-kit-0.25.3-1.fc40.s390x 94/153 Installing : p11-kit-trust-0.25.3-1.fc40.s390x 95/153 Running scriptlet: p11-kit-trust-0.25.3-1.fc40.s390x 95/153 Installing : libgomp-13.2.1-6.fc40.s390x 96/153 Installing : libnghttp2-1.58.0-1.fc40.s390x 97/153 Installing : libpkgconf-1.9.5-2.fc39.s390x 98/153 Installing : pkgconf-1.9.5-2.fc39.s390x 99/153 Installing : pkgconf-pkg-config-1.9.5-2.fc39.s390x 100/153 Installing : libsigsegv-2.14-5.fc39.s390x 101/153 Installing : gawk-5.2.2-2.fc39.s390x 102/153 Installing : libverto-0.3.2-6.fc39.s390x 103/153 Installing : xxhash-libs-0.8.2-1.fc39.s390x 104/153 Installing : libssh-config-0.10.6-2.fc40.noarch 105/153 Installing : kernel-srpm-macros-1.0-20.fc39.noarch 106/153 Installing : gnat-srpm-macros-6-3.fc39.noarch 107/153 Installing : ghc-srpm-macros-1.6.1-3.fc40.noarch 108/153 Installing : fpc-srpm-macros-1.3-8.fc39.noarch 109/153 Installing : coreutils-common-9.4-1.fc40.s390x 110/153 Installing : openssl-libs-1:3.1.4-1.fc40.s390x 111/153 Installing : coreutils-9.4-1.fc40.s390x 112/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 113/153 Installing : ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 113/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 113/153 Installing : krb5-libs-1.21.2-2.fc40.s390x 114/153 Installing : libtirpc-1.3.4-1.rc1.fc40.s390x 115/153 Running scriptlet: authselect-libs-1.4.3-1.fc40.s390x 116/153 Installing : authselect-libs-1.4.3-1.fc40.s390x 116/153 Installing : gzip-1.12-6.fc39.s390x 117/153 Installing : cracklib-2.9.11-2.fc39.s390x 118/153 Installing : libpwquality-1.4.5-6.fc39.s390x 119/153 Installing : authselect-1.4.3-1.fc40.s390x 120/153 Installing : libnsl2-2.0.0-6.fc39.s390x 121/153 Installing : pam-1.5.3-9.fc40.s390x 122/153 Installing : libssh-0.10.6-2.fc40.s390x 123/153 Installing : libarchive-3.7.2-1.fc40.s390x 124/153 Installing : libevent-2.1.12-9.fc39.s390x 125/153 Installing : openldap-2.6.6-1.fc39.s390x 126/153 Installing : libcurl-8.5.0-1.fc40.s390x 127/153 Installing : elfutils-libs-0.190-4.fc40.s390x 128/153 Installing : elfutils-debuginfod-client-0.190-4.fc40.s390x 129/153 Installing : binutils-gold-2.41-20.fc40.s390x 130/153 Running scriptlet: binutils-gold-2.41-20.fc40.s390x 130/153 Installing : binutils-2.41-20.fc40.s390x 131/153 Running scriptlet: binutils-2.41-20.fc40.s390x 131/153 Installing : gdb-minimal-14.1-1.fc40.s390x 132/153 Installing : elfutils-0.190-4.fc40.s390x 133/153 Installing : debugedit-5.0-12.fc40.s390x 134/153 Installing : curl-8.5.0-1.fc40.s390x 135/153 Installing : rpm-sequoia-1.5.0-2.fc40.s390x 136/153 Installing : rpm-libs-4.19.1-2.fc40.s390x 137/153 Running scriptlet: rpm-4.19.1-2.fc40.s390x 138/153 Installing : rpm-4.19.1-2.fc40.s390x 138/153 Installing : efi-srpm-macros-5-9.fc39.noarch 139/153 Installing : lua-srpm-macros-1-9.fc39.noarch 140/153 Installing : zig-srpm-macros-1-1.fc40.noarch 141/153 Installing : rpm-build-libs-4.19.1-2.fc40.s390x 142/153 Installing : ansible-srpm-macros-1-11.fc39.noarch 143/153 Installing : fonts-srpm-macros-1:2.0.5-12.fc39.noarch 144/153 Installing : forge-srpm-macros-0.2.0-1.fc40.noarch 145/153 Installing : go-srpm-macros-3.3.1-1.fc40.noarch 146/153 Installing : python-srpm-macros-3.12-5.fc40.noarch 147/153 Installing : redhat-rpm-config-274-1.fc40.noarch 148/153 Installing : rpm-build-4.19.1-2.fc40.s390x 149/153 Installing : pyproject-srpm-macros-1.11.0-1.fc40.noarch 150/153 Installing : util-linux-2.39.3-1.fc40.s390x 151/153 Installing : which-2.21-40.fc39.s390x 152/153 Installing : info-7.1-1.fc40.s390x 153/153 Running scriptlet: filesystem-3.18-6.fc39.s390x 153/153 Running scriptlet: ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch 153/153 Running scriptlet: authselect-libs-1.4.3-1.fc40.s390x 153/153 Running scriptlet: rpm-4.19.1-2.fc40.s390x 153/153 Running scriptlet: info-7.1-1.fc40.s390x 153/153 Installed: alternatives-1.25-1.fc39.s390x ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc40.s390x authselect-1.4.3-1.fc40.s390x authselect-libs-1.4.3-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.21-2.fc40.s390x binutils-2.41-20.fc40.s390x binutils-gold-2.41-20.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.s390x coreutils-common-9.4-1.fc40.s390x cpio-2.14-5.fc40.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-11.fc39.s390x debugedit-5.0-12.fc40.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.19-4.fc39.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.s390x elfutils-debuginfod-client-0.190-4.fc40.s390x elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.s390x elfutils-libs-0.190-4.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.26.noarch fedora-release-common-40-0.26.noarch fedora-release-identity-basic-40-0.26.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-1:4.9.0-6.fc40.s390x fonts-srpm-macros-1:2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.s390x gdb-minimal-14.1-1.fc40.s390x gdbm-1:1.23-4.fc39.s390x gdbm-libs-1:1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-30.fc40.s390x glibc-common-2.38.9000-30.fc40.s390x glibc-gconv-extra-2.38.9000-30.fc40.s390x glibc-minimal-langpack-2.38.9000-30.fc40.s390x gmp-1:6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc40.s390x krb5-libs-1.21.2-2.fc40.s390x libacl-2.3.1-11.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.1-9.fc40.s390x libblkid-2.39.3-1.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.69-1.fc40.s390x libcap-ng-0.8.4-2.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.5.0-1.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.3-1.fc40.s390x libffi-3.4.4-5.fc40.s390x libgcc-13.2.1-6.fc40.s390x libgomp-13.2.1-6.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.3-1.fc40.s390x libnghttp2-1.58.0-1.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.2-4.fc39.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.6-2.fc40.s390x libsemanage-3.6-1.fc40.s390x libsepol-3.6-1.fc40.s390x libsigsegv-2.14-5.fc39.s390x libsmartcols-2.39.3-1.fc40.s390x libssh-0.10.6-2.fc40.s390x libssh-config-0.10.6-2.fc40.noarch libstdc++-13.2.1-6.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-1.rc1.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.3-1.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-3.fc40.s390x libxml2-2.12.3-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-1:3.1.4-1.fc40.s390x p11-kit-0.25.3-1.fc40.s390x p11-kit-trust-0.25.3-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-9.fc40.s390x pam-libs-1.5.3-9.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-2.fc40.s390x pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.11.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.12-1.fc40.noarch qt6-srpm-macros-6.6.1-3.fc40.noarch readline-8.2-4.fc39.s390x redhat-rpm-config-274-1.fc40.noarch rpm-4.19.1-2.fc40.s390x rpm-build-4.19.1-2.fc40.s390x rpm-build-libs-4.19.1-2.fc40.s390x rpm-libs-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.5-1.fc40.noarch shadow-utils-2:4.14.0-2.fc40.s390x sqlite-libs-3.44.2-1.fc40.s390x systemd-libs-255.1-1.fc40.s390x tar-2:1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.3-1.fc40.s390x util-linux-core-2.39.3-1.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.5-1.fc40.s390x xz-libs-5.4.5-1.fc40.s390x zig-srpm-macros-1-1.fc40.noarch zip-3.0-39.fc40.s390x zlib-ng-compat-2.1.5-1.fc40.s390x zstd-1.5.5-4.fc39.s390x Complete! Finish: installing minimal buildroot with dnf Start: creating root cache Finish: creating root cache Finish: chroot init INFO: Installed packages: INFO: alternatives-1.25-1.fc39.s390x ansible-srpm-macros-1-11.fc39.noarch audit-libs-3.1.2-5.fc40.s390x authselect-1.4.3-1.fc40.s390x authselect-libs-1.4.3-1.fc40.s390x basesystem-11-18.fc39.noarch bash-5.2.21-2.fc40.s390x binutils-2.41-20.fc40.s390x binutils-gold-2.41-20.fc40.s390x bzip2-1.0.8-16.fc39.s390x bzip2-libs-1.0.8-16.fc39.s390x ca-certificates-2023.2.62_v7.0.401-4.fc40.noarch coreutils-9.4-1.fc40.s390x coreutils-common-9.4-1.fc40.s390x cpio-2.14-5.fc40.s390x cracklib-2.9.11-2.fc39.s390x crypto-policies-20231204-1.git1e3a2e4.fc40.noarch curl-8.5.0-1.fc40.s390x cyrus-sasl-lib-2.1.28-11.fc39.s390x debugedit-5.0-12.fc40.s390x diffutils-3.10-3.fc39.s390x dwz-0.15-3.fc39.s390x ed-1.19-4.fc39.s390x efi-srpm-macros-5-9.fc39.noarch elfutils-0.190-4.fc40.s390x elfutils-debuginfod-client-0.190-4.fc40.s390x elfutils-default-yama-scope-0.190-4.fc40.noarch elfutils-libelf-0.190-4.fc40.s390x elfutils-libs-0.190-4.fc40.s390x fedora-gpg-keys-40-0.2.noarch fedora-release-40-0.26.noarch fedora-release-common-40-0.26.noarch fedora-release-identity-basic-40-0.26.noarch fedora-repos-40-0.2.noarch fedora-repos-rawhide-40-0.2.noarch file-5.45-1.fc40.s390x file-libs-5.45-1.fc40.s390x filesystem-3.18-6.fc39.s390x findutils-4.9.0-6.fc40.s390x fonts-srpm-macros-2.0.5-12.fc39.noarch forge-srpm-macros-0.2.0-1.fc40.noarch fpc-srpm-macros-1.3-8.fc39.noarch gawk-5.2.2-2.fc39.s390x gdb-minimal-14.1-1.fc40.s390x gdbm-1.23-4.fc39.s390x gdbm-libs-1.23-4.fc39.s390x ghc-srpm-macros-1.6.1-3.fc40.noarch glibc-2.38.9000-30.fc40.s390x glibc-common-2.38.9000-30.fc40.s390x glibc-gconv-extra-2.38.9000-30.fc40.s390x glibc-minimal-langpack-2.38.9000-30.fc40.s390x gmp-6.2.1-5.fc39.s390x gnat-srpm-macros-6-3.fc39.noarch go-srpm-macros-3.3.1-1.fc40.noarch grep-3.11-5.fc40.s390x gzip-1.12-6.fc39.s390x info-7.1-1.fc40.s390x jansson-2.13.1-7.fc39.s390x kernel-srpm-macros-1.0-20.fc39.noarch keyutils-libs-1.6.3-1.fc40.s390x krb5-libs-1.21.2-2.fc40.s390x libacl-2.3.1-11.fc40.s390x libarchive-3.7.2-1.fc40.s390x libattr-2.5.1-9.fc40.s390x libblkid-2.39.3-1.fc40.s390x libbrotli-1.1.0-1.fc40.s390x libcap-2.69-1.fc40.s390x libcap-ng-0.8.4-2.fc40.s390x libcom_err-1.47.0-2.fc39.s390x libcurl-8.5.0-1.fc40.s390x libeconf-0.5.2-1.fc40.s390x libevent-2.1.12-9.fc39.s390x libfdisk-2.39.3-1.fc40.s390x libffi-3.4.4-5.fc40.s390x libgcc-13.2.1-6.fc40.s390x libgomp-13.2.1-6.fc40.s390x libidn2-2.3.4-3.fc39.s390x libmount-2.39.3-1.fc40.s390x libnghttp2-1.58.0-1.fc40.s390x libnsl2-2.0.0-6.fc39.s390x libpkgconf-1.9.5-2.fc39.s390x libpsl-0.21.2-4.fc39.s390x libpwquality-1.4.5-6.fc39.s390x libselinux-3.6-2.fc40.s390x libsemanage-3.6-1.fc40.s390x libsepol-3.6-1.fc40.s390x libsigsegv-2.14-5.fc39.s390x libsmartcols-2.39.3-1.fc40.s390x libssh-0.10.6-2.fc40.s390x libssh-config-0.10.6-2.fc40.noarch libstdc++-13.2.1-6.fc40.s390x libtasn1-4.19.0-3.fc39.s390x libtirpc-1.3.4-1.rc1.fc40.s390x libunistring-1.1-5.fc40.s390x libutempter-1.2.1-10.fc39.s390x libuuid-2.39.3-1.fc40.s390x libverto-0.3.2-6.fc39.s390x libxcrypt-4.4.36-3.fc40.s390x libxml2-2.12.3-1.fc40.s390x libzstd-1.5.5-4.fc39.s390x lua-libs-5.4.6-3.fc39.s390x lua-srpm-macros-1-9.fc39.noarch lz4-libs-1.9.4-4.fc39.s390x mpfr-4.2.1-1.fc40.s390x ncurses-base-6.4-8.20231001.fc40.noarch ncurses-libs-6.4-8.20231001.fc40.s390x ocaml-srpm-macros-9-1.fc40.noarch openblas-srpm-macros-2-14.fc39.noarch openldap-2.6.6-1.fc39.s390x openssl-libs-3.1.4-1.fc40.s390x p11-kit-0.25.3-1.fc40.s390x p11-kit-trust-0.25.3-1.fc40.s390x package-notes-srpm-macros-0.5-9.fc39.noarch pam-1.5.3-9.fc40.s390x pam-libs-1.5.3-9.fc40.s390x patch-2.7.6-22.fc39.s390x pcre2-10.42-2.fc40.s390x pcre2-syntax-10.42-2.fc40.noarch perl-srpm-macros-1-51.fc39.noarch pkgconf-1.9.5-2.fc39.s390x pkgconf-m4-1.9.5-2.fc39.noarch pkgconf-pkg-config-1.9.5-2.fc39.s390x popt-1.19-3.fc39.s390x publicsuffix-list-dafsa-20230812-1.fc40.noarch pyproject-srpm-macros-1.11.0-1.fc40.noarch python-srpm-macros-3.12-5.fc40.noarch qt5-srpm-macros-5.15.12-1.fc40.noarch qt6-srpm-macros-6.6.1-3.fc40.noarch readline-8.2-4.fc39.s390x redhat-rpm-config-274-1.fc40.noarch rpm-4.19.1-2.fc40.s390x rpm-build-4.19.1-2.fc40.s390x rpm-build-libs-4.19.1-2.fc40.s390x rpm-libs-4.19.1-2.fc40.s390x rpm-sequoia-1.5.0-2.fc40.s390x rust-srpm-macros-25.2-2.fc40.noarch sed-4.8-14.fc39.s390x setup-2.14.5-1.fc40.noarch shadow-utils-4.14.0-2.fc40.s390x sqlite-libs-3.44.2-1.fc40.s390x systemd-libs-255.1-1.fc40.s390x tar-1.35-2.fc40.s390x unzip-6.0-62.fc39.s390x util-linux-2.39.3-1.fc40.s390x util-linux-core-2.39.3-1.fc40.s390x which-2.21-40.fc39.s390x xxhash-libs-0.8.2-1.fc39.s390x xz-5.4.5-1.fc40.s390x xz-libs-5.4.5-1.fc40.s390x zig-srpm-macros-1-1.fc40.noarch zip-3.0-39.fc40.s390x zlib-ng-compat-2.1.5-1.fc40.s390x zstd-1.5.5-4.fc39.s390x Start: buildsrpm Start: rpmbuild -bs Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.src.rpm Finish: rpmbuild -bs INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-s390x-1704460468.318683/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-s390x-1704460468.318683/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-s390x-1704460468.318683/root/var/log/dnf.log Finish: buildsrpm INFO: Done(/var/lib/copr-rpmbuild/workspace/workdir-qbhk0sj5/snakemake/snakemake.spec) Config(child) 3 minutes 19 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot INFO: Start(/var/lib/copr-rpmbuild/results/snakemake-7.32.4-3.fc40.src.rpm) Config(fedora-39-s390x) Start(bootstrap): chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1704460468.318683/root. INFO: reusing tmpfs at /var/lib/mock/fedora-39-s390x-bootstrap-1704460468.318683/root. INFO: calling preinit hooks INFO: enabled root cache INFO: enabled package manager cache Start(bootstrap): cleaning package manager metadata Finish(bootstrap): cleaning package manager metadata Finish(bootstrap): chroot init Start: chroot init INFO: mounting tmpfs at /var/lib/mock/fedora-39-s390x-1704460468.318683/root. INFO: calling preinit hooks INFO: enabled root cache Start: unpacking root cache Finish: unpacking root cache INFO: enabled package manager cache Start: cleaning package manager metadata Finish: cleaning package manager metadata INFO: enabled HW Info plugin INFO: Buildroot is handled by package management downloaded with a bootstrap image: rpm-4.19.0-1.fc39.s390x rpm-sequoia-1.5.0-1.fc39.s390x python3-dnf-4.18.2-1.fc40.noarch python3-dnf-plugins-core-4.4.4-1.fc40.noarch yum-4.18.2-1.fc40.noarch Finish: chroot init Start: build phase for snakemake-7.32.4-3.fc40.src.rpm Start: build setup for snakemake-7.32.4-3.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.src.rpm No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 223 B/s | 1.5 kB 00:07 Additional repo http_kojipkgs_fedoraproject_org 141 kB/s | 3.8 kB 00:00 fedora 861 B/s | 4.3 kB 00:05 updates 1.1 kB/s | 5.3 kB 00:05 Dependencies resolved. ======================================================================================================================================================= Package Arch Version Repository Size ======================================================================================================================================================= Installing: help2man noarch 1.49.3-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 217 k latexmk noarch 4.82-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 421 k librsvg2-tools s390x 2.57.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.9 M make s390x 1:4.4.1-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 597 k python3-boto3 noarch 1.34.12-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 338 k python3-configargparse noarch 1.7-1.fc40 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 276 k xdg-utils noarch 1.2.0~git20231511.21fb316-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 77 k xml-common noarch 0.6.3-62.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31 k xpdf-libs s390x 1:4.04-10.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 667 k xprop s390x 1.2.5-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 36 k zziplib s390x 0.13.72-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 86 k Transaction Summary ======================================================================================================================================================= Install 665 Packages Total download size: 378 M Installed size: 1.1 G Downloading Packages: (1/665): flexiblas-3.3.1-5.fc39.s390x.rpm 20 kB/s | 33 kB 00:01 (2/665): flexiblas-openblas-openmp-3.3.1-5.fc39 7.2 kB/s | 18 kB 00:02 (3/665): graphite2-1.3.14-13.fc40.s390x.rpm 55 kB/s | 100 kB 00:01 (4/665): libjxl-0.8.2-3.fc40.s390x.rpm 420 kB/s | 1.0 MB 00:02 (5/665): libsvm-3.32-2.fc39.s390x.rpm 217 kB/s | 338 kB 00:01 (6/665): flexiblas-netlib-3.3.1-5.fc39.s390x.rp 630 kB/s | 3.6 MB 00:05 (7/665): abattis-cantarell-vf-fonts-0.301-10.fc 5.1 MB/s | 121 kB 00:00 (8/665): adobe-mappings-cmap-20230622-1.fc39.no 47 MB/s | 2.1 MB 00:00 (9/665): adobe-mappings-cmap-deprecated-2023062 23 MB/s | 113 kB 00:00 (10/665): adobe-mappings-pdf-20190401-5.fc39.no 64 MB/s | 689 kB 00:00 (11/665): at-spi2-core-2.50.0-1.fc40.s390x.rpm 56 MB/s | 350 kB 00:00 (12/665): atk-2.50.0-1.fc40.s390x.rpm 20 MB/s | 81 kB 00:00 (13/665): avahi-libs-0.8-24.fc39.s390x.rpm 17 MB/s | 67 kB 00:00 (14/665): biber-2.19-3.fc39.noarch.rpm 45 MB/s | 280 kB 00:00 (15/665): cairo-1.18.0-1.fc40.s390x.rpm 79 MB/s | 720 kB 00:00 (16/665): cairo-gobject-1.18.0-1.fc40.s390x.rpm 5.1 MB/s | 18 kB 00:00 (17/665): clisp-2.49.93-35.20230718git6692497.f 181 MB/s | 6.1 MB 00:00 (18/665): cups-libs-2.4.7-6.fc40.s390x.rpm 46 MB/s | 278 kB 00:00 (19/665): dbus-1.14.10-1.fc40.s390x.rpm 2.1 MB/s | 8.1 kB 00:00 (20/665): dbus-broker-35-2.fc40.s390x.rpm 37 MB/s | 176 kB 00:00 (21/665): dbus-common-1.14.10-1.fc40.noarch.rpm 4.3 MB/s | 15 kB 00:00 (22/665): dbus-libs-1.14.10-1.fc40.s390x.rpm 36 MB/s | 159 kB 00:00 (23/665): default-fonts-core-sans-4.0-9.fc40.no 6.4 MB/s | 25 kB 00:00 (24/665): desktop-file-utils-0.26-9.fc39.s390x. 17 MB/s | 72 kB 00:00 (25/665): emacs-filesystem-29.1-14.fc40.noarch. 1.9 MB/s | 7.4 kB 00:00 (26/665): expat-2.5.0-3.fc39.s390x.rpm 27 MB/s | 114 kB 00:00 (27/665): fcgi-2.4.0-47.fc39.s390x.rpm 12 MB/s | 47 kB 00:00 (28/665): ffcall-2.4-6.fc39.s390x.rpm 9.3 MB/s | 36 kB 00:00 (29/665): fontconfig-2.15.0-1.fc40.s390x.rpm 54 MB/s | 264 kB 00:00 (30/665): fonts-filesystem-2.0.5-12.fc39.noarch 2.1 MB/s | 8.2 kB 00:00 (31/665): freetype-2.13.1-2.fc39.s390x.rpm 79 MB/s | 441 kB 00:00 (32/665): fribidi-1.0.13-2.fc39.s390x.rpm 25 MB/s | 93 kB 00:00 (33/665): gc-8.2.2-4.fc39.s390x.rpm 13 MB/s | 114 kB 00:00 (34/665): gd-2.3.3-12.fc39.s390x.rpm 35 MB/s | 152 kB 00:00 (35/665): gdk-pixbuf2-2.42.10-5.fc39.s390x.rpm 74 MB/s | 465 kB 00:00 (36/665): gdk-pixbuf2-modules-2.42.10-5.fc39.s3 24 MB/s | 88 kB 00:00 (37/665): ghostscript-10.02.1-4.fc40.s390x.rpm 8.6 MB/s | 32 kB 00:00 (38/665): ghostscript-tools-fonts-10.02.1-4.fc4 3.7 MB/s | 12 kB 00:00 (39/665): ghostscript-tools-printing-10.02.1-4. 1.6 MB/s | 13 kB 00:00 (40/665): giflib-5.2.1-17.fc40.s390x.rpm 14 MB/s | 54 kB 00:00 (41/665): glib2-2.78.3-1.fc40.s390x.rpm 214 MB/s | 2.8 MB 00:00 (42/665): gnutls-3.8.2-2.fc40.s390x.rpm 91 MB/s | 1.0 MB 00:00 (43/665): google-droid-sans-fonts-20200215-17.f 210 MB/s | 2.7 MB 00:00 (44/665): google-noto-fonts-common-20230801-4.f 4.7 MB/s | 17 kB 00:00 (45/665): google-noto-sans-vf-fonts-20230801-4. 102 MB/s | 583 kB 00:00 (46/665): groff-base-1.23.0-3.fc40.s390x.rpm 143 MB/s | 1.1 MB 00:00 (47/665): gtk-update-icon-cache-3.24.39-1.fc40. 8.6 MB/s | 34 kB 00:00 (48/665): gtk2-2.24.33-15.fc39.s390x.rpm 137 MB/s | 3.3 MB 00:00 (49/665): guile22-2.2.7-9.fc39.s390x.rpm 220 MB/s | 6.4 MB 00:00 (50/665): gumbo-parser-0.10.1-29.fc39.s390x.rpm 31 MB/s | 135 kB 00:00 (51/665): harfbuzz-8.3.0-2.fc40.s390x.rpm 128 MB/s | 1.0 MB 00:00 (52/665): help2man-1.49.3-3.fc39.noarch.rpm 48 MB/s | 217 kB 00:00 (53/665): hicolor-icon-theme-0.17-16.fc39.noarc 18 MB/s | 66 kB 00:00 (54/665): highway-1.0.7-1.fc40.s390x.rpm 58 MB/s | 283 kB 00:00 (55/665): jbig2dec-libs-0.20-1.fc40.s390x.rpm 19 MB/s | 77 kB 00:00 (56/665): jbigkit-libs-2.1-27.fc40.s390x.rpm 16 MB/s | 55 kB 00:00 (57/665): latexmk-4.82-1.fc40.noarch.rpm 78 MB/s | 421 kB 00:00 (58/665): lcms2-2.15-2.fc39.s390x.rpm 42 MB/s | 184 kB 00:00 (59/665): leptonica-1.84.1-1.fc40.s390x.rpm 143 MB/s | 1.2 MB 00:00 (60/665): libICE-1.1.1-1.fc40.s390x.rpm 19 MB/s | 77 kB 00:00 (61/665): libSM-1.2.4-1.fc40.s390x.rpm 11 MB/s | 45 kB 00:00 (62/665): libX11-1.8.7-1.fc40.s390x.rpm 105 MB/s | 669 kB 00:00 (63/665): libX11-common-1.8.7-1.fc40.noarch.rpm 30 MB/s | 144 kB 00:00 (64/665): libX11-xcb-1.8.7-1.fc40.s390x.rpm 3.4 MB/s | 12 kB 00:00 (65/665): libXau-1.0.11-4.fc40.s390x.rpm 9.2 MB/s | 31 kB 00:00 (66/665): libXaw-1.0.15-1.fc40.s390x.rpm 49 MB/s | 206 kB 00:00 (67/665): libXcomposite-0.4.6-1.fc40.s390x.rpm 6.7 MB/s | 24 kB 00:00 (68/665): libXcursor-1.2.1-5.fc40.s390x.rpm 8.5 MB/s | 32 kB 00:00 (69/665): libXdamage-1.1.6-1.fc40.s390x.rpm 6.6 MB/s | 23 kB 00:00 (70/665): libXext-1.3.5-4.fc40.s390x.rpm 9.4 MB/s | 40 kB 00:00 (71/665): libXfixes-6.0.1-1.fc40.s390x.rpm 5.1 MB/s | 19 kB 00:00 (72/665): libXft-2.3.8-4.fc40.s390x.rpm 19 MB/s | 76 kB 00:00 (73/665): libXi-1.8.1-3.fc40.s390x.rpm 11 MB/s | 42 kB 00:00 (74/665): libXinerama-1.1.5-4.fc40.s390x.rpm 3.9 MB/s | 14 kB 00:00 (75/665): libXmu-1.1.4-4.fc40.s390x.rpm 20 MB/s | 81 kB 00:00 (76/665): libXpm-3.5.17-1.fc40.s390x.rpm 18 MB/s | 69 kB 00:00 (77/665): libXrandr-1.5.4-1.fc40.s390x.rpm 7.7 MB/s | 28 kB 00:00 (78/665): libXrender-0.9.11-4.fc40.s390x.rpm 7.7 MB/s | 28 kB 00:00 (79/665): libXt-1.3.0-1.fc40.s390x.rpm 43 MB/s | 191 kB 00:00 (80/665): libXtst-1.2.4-4.fc40.s390x.rpm 5.8 MB/s | 21 kB 00:00 (81/665): libXxf86vm-1.1.5-4.fc40.s390x.rpm 4.7 MB/s | 18 kB 00:00 (82/665): libaom-3.8.0-1.fc40.s390x.rpm 163 MB/s | 1.4 MB 00:00 (83/665): libavif-0.11.1-11.fc39.s390x.rpm 22 MB/s | 89 kB 00:00 (84/665): libb2-0.98.1-9.fc39.s390x.rpm 6.7 MB/s | 27 kB 00:00 (85/665): libdatrie-0.2.13-7.fc39.s390x.rpm 8.7 MB/s | 33 kB 00:00 (86/665): libdav1d-1.2.1-2.fc39.s390x.rpm 62 MB/s | 323 kB 00:00 (87/665): libdb-5.3.28-58.fc40.s390x.rpm 107 MB/s | 774 kB 00:00 (88/665): libdrm-2.4.117-1.fc40.s390x.rpm 25 MB/s | 102 kB 00:00 (89/665): libgfortran-13.2.1-6.fc40.s390x.rpm 65 MB/s | 580 kB 00:00 (90/665): libglade2-2.6.4-30.fc39.s390x.rpm 16 MB/s | 60 kB 00:00 (91/665): libglvnd-1.7.0-1.fc40.s390x.rpm 31 MB/s | 145 kB 00:00 (92/665): libglvnd-glx-1.7.0-1.fc40.s390x.rpm 34 MB/s | 171 kB 00:00 (93/665): libgs-10.02.1-4.fc40.s390x.rpm 203 MB/s | 3.6 MB 00:00 (94/665): libicu-73.2-3.fc40.s390x.rpm 285 MB/s | 11 MB 00:00 (95/665): libijs-0.35-19.fc39.s390x.rpm 7.0 MB/s | 29 kB 00:00 (96/665): libimagequant-4.0.3-2.fc40.s390x.rpm 61 MB/s | 354 kB 00:00 (97/665): libjpeg-turbo-2.1.4-3.fc39.s390x.rpm 39 MB/s | 178 kB 00:00 (98/665): liblerc-4.0.0-4.fc39.s390x.rpm 27 MB/s | 112 kB 00:00 (99/665): libpaper-2.1.1-1.fc39.s390x.rpm 7.0 MB/s | 27 kB 00:00 (100/665): libpng-1.6.40-1.fc40.s390x.rpm 30 MB/s | 130 kB 00:00 (101/665): libpq-16.1-1.fc40.s390x.rpm 39 MB/s | 253 kB 00:00 (102/665): librsvg2-2.57.1-1.fc40.s390x.rpm 176 MB/s | 1.7 MB 00:00 (103/665): librsvg2-tools-2.57.1-1.fc40.s390x.r 173 MB/s | 1.9 MB 00:00 (104/665): libthai-0.1.29-6.fc39.s390x.rpm 41 MB/s | 215 kB 00:00 (105/665): libtiff-4.5.0-3.fc40.s390x.rpm 66 MB/s | 335 kB 00:00 (106/665): libtool-ltdl-2.4.7-8.fc40.s390x.rpm 10 MB/s | 37 kB 00:00 (107/665): libwebp-1.3.2-2.fc40.s390x.rpm 53 MB/s | 256 kB 00:00 (108/665): libxcb-1.16-2.fc40.s390x.rpm 48 MB/s | 245 kB 00:00 (109/665): libxshmfence-1.3.2-1.fc40.s390x.rpm 3.4 MB/s | 12 kB 00:00 (110/665): libxslt-1.1.39-1.fc40.s390x.rpm 38 MB/s | 189 kB 00:00 (111/665): mailcap-2.1.54-2.fc39.noarch.rpm 9.2 MB/s | 34 kB 00:00 (112/665): make-4.4.1-2.fc39.s390x.rpm 101 MB/s | 597 kB 00:00 (113/665): mesa-libGL-23.3.2-4.fc40.s390x.rpm 47 MB/s | 199 kB 00:00 (114/665): mesa-libglapi-23.3.2-4.fc40.s390x.rp 19 MB/s | 78 kB 00:00 (115/665): mpdecimal-2.5.1-7.fc39.s390x.rpm 21 MB/s | 100 kB 00:00 (116/665): python3-numpy-1.26.2-1.fc40.s390x.rp 3.7 MB/s | 6.9 MB 00:01 (117/665): mupdf-1.23.7-3.fc40.s390x.rpm 248 MB/s | 17 MB 00:00 (118/665): ncurses-6.4-8.20231001.fc40.s390x.rp 13 MB/s | 422 kB 00:00 (119/665): nettle-3.9.1-2.fc39.s390x.rpm 58 MB/s | 456 kB 00:00 (120/665): openblas-0.3.25-1.fc40.s390x.rpm 10 MB/s | 38 kB 00:00 (121/665): openjpeg2-2.5.0-5.fc40.s390x.rpm 22 MB/s | 197 kB 00:00 (122/665): pango-1.51.0-1.fc40.s390x.rpm 42 MB/s | 354 kB 00:00 (123/665): openblas-openmp-0.3.25-1.fc40.s390x. 198 MB/s | 4.3 MB 00:00 (124/665): perl-Authen-SASL-2.1700-1.fc40.noarc 15 MB/s | 57 kB 00:00 (125/665): perl-AutoLoader-5.74-503.fc40.noarch 5.2 MB/s | 21 kB 00:00 (126/665): perl-B-1.88-503.fc40.s390x.rpm 16 MB/s | 178 kB 00:00 (127/665): pari-2.15.4-2.fc39.s390x.rpm 163 MB/s | 4.3 MB 00:00 (128/665): perl-B-Hooks-EndOfScope-0.26-7.fc39. 5.8 MB/s | 38 kB 00:00 (129/665): perl-Business-ISBN-3.008-2.fc39.noar 9.0 MB/s | 32 kB 00:00 (130/665): perl-Business-ISBN-Data-20231220.001 9.8 MB/s | 40 kB 00:00 (131/665): perl-Business-ISMN-1.203-2.fc39.noar 4.9 MB/s | 25 kB 00:00 (132/665): perl-Business-ISSN-1.005-8.fc39.noar 4.9 MB/s | 18 kB 00:00 (133/665): perl-Carp-1.54-500.fc39.noarch.rpm 6.8 MB/s | 29 kB 00:00 (134/665): perl-Class-Accessor-0.51-18.fc39.noa 5.1 MB/s | 28 kB 00:00 (135/665): perl-Class-Data-Inheritable-0.09-6.f 3.6 MB/s | 13 kB 00:00 (136/665): perl-Class-Inspector-1.36-14.fc39.no 8.4 MB/s | 30 kB 00:00 (137/665): perl-Class-Method-Modifiers-2.15-2.f 8.3 MB/s | 43 kB 00:00 (138/665): perl-Class-Singleton-1.6-9.fc39.noar 6.8 MB/s | 25 kB 00:00 (139/665): perl-Class-Struct-0.68-503.fc40.noar 6.6 MB/s | 22 kB 00:00 (140/665): perl-Clone-0.46-4.fc39.s390x.rpm 5.8 MB/s | 22 kB 00:00 (141/665): perl-Compress-Raw-Bzip2-2.206-1.fc39 9.8 MB/s | 35 kB 00:00 (142/665): perl-Compress-Raw-Zlib-2.206-1.fc39. 7.5 MB/s | 64 kB 00:00 (143/665): perl-Convert-ASN1-0.34-1.fc40.noarch 7.0 MB/s | 59 kB 00:00 (144/665): perl-Data-Compare-1.29-2.fc39.noarch 8.3 MB/s | 34 kB 00:00 (145/665): perl-Data-Dump-1.25-8.fc39.noarch.rp 9.6 MB/s | 32 kB 00:00 (146/665): perl-Data-Dumper-2.188-501.fc39.s390 16 MB/s | 57 kB 00:00 (147/665): perl-Data-OptList-0.114-2.fc39.noarc 6.4 MB/s | 27 kB 00:00 (148/665): perl-Data-Uniqid-0.12-31.fc39.noarch 3.3 MB/s | 12 kB 00:00 (149/665): perl-Date-ISO8601-0.005-18.fc39.noar 4.3 MB/s | 19 kB 00:00 (150/665): perl-DateTime-1.65-1.fc40.s390x.rpm 30 MB/s | 130 kB 00:00 (151/665): 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632/665 Installing : pango-1.51.0-1.fc40.s390x 633/665 Installing : librsvg2-2.57.1-1.fc40.s390x 634/665 Installing : rsvg-pixbuf-loader-2.57.1-1.fc40.s390x 635/665 Installing : gdk-pixbuf2-modules-2.42.10-5.fc39.s390x 636/665 Installing : ffcall-2.4-6.fc39.s390x 637/665 Installing : fcgi-2.4.0-47.fc39.s390x 638/665 Installing : dbus-common-1:1.14.10-1.fc40.noarch 639/665 Running scriptlet: dbus-common-1:1.14.10-1.fc40.noarch 639/665 Running scriptlet: dbus-broker-35-2.fc40.s390x 640/665 Installing : dbus-broker-35-2.fc40.s390x 640/665 Running scriptlet: dbus-broker-35-2.fc40.s390x 640/665 Installing : dbus-1:1.14.10-1.fc40.s390x 641/665 Installing : at-spi2-core-2.50.0-1.fc40.s390x 642/665 Installing : atk-2.50.0-1.fc40.s390x 643/665 Installing : gtk2-2.24.33-15.fc39.s390x 644/665 Installing : libglade2-2.6.4-30.fc39.s390x 645/665 Installing : adobe-mappings-pdf-20190401-5.fc39.noarch 646/665 Installing : libgs-10.02.1-4.fc40.s390x 647/665 Installing : ghostscript-tools-fonts-10.02.1-4.fc40.s390x 648/665 Installing : ghostscript-tools-printing-10.02.1-4.fc40.s390x 649/665 Installing : ghostscript-10.02.1-4.fc40.s390x 650/665 Installing : texlive-dvisvgm-11:svn66532-77.fc39.s390x 651/665 Installing : libsvm-3.32-2.fc39.s390x 652/665 Installing : clisp-2.49.93-35.20230718git6692497.fc40.s390x 653/665 Installing : texlive-xindy-11:svn65958-77.fc39.s390x 654/665 Installing : python3-sphinx-latex-1:7.2.6-4.fc40.noarch 655/665 Installing : latexmk-4.82-1.fc40.noarch 656/665 Installing : librsvg2-tools-2.57.1-1.fc40.s390x 657/665 Installing : make-1:4.4.1-2.fc39.s390x 658/665 Installing : help2man-1.49.3-3.fc39.noarch 659/665 Installing : python3-pandas-1.5.3-7.fc39~bootstrap.s390x 660/665 Installing : python3-pytest-7.4.3-1.fc40.noarch 661/665 Installing : python3-requests-mock-1.10.0-5.fc39.noarch 662/665 Installing : python3-devel-3.12.1-2.fc40.s390x 663/665 Installing : python3-boto3-1.34.12-1.fc40.noarch 664/665 Installing : python3-configargparse-1.7-1.fc40.noarch 665/665 Running scriptlet: texlive-base-11:20230311-77.fc39.s390x 665/665 Running scriptlet: urw-base35-bookman-fonts-20200910-18.fc39.noarch 665/665 Running scriptlet: urw-base35-c059-fonts-20200910-18.fc39.noarch 665/665 Running scriptlet: urw-base35-d050000l-fonts-20200910-18.fc39.noarc 665/665 Running scriptlet: urw-base35-gothic-fonts-20200910-18.fc39.noarch 665/665 Running scriptlet: urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39 665/665 Running scriptlet: urw-base35-nimbus-roman-fonts-20200910-18.fc39.n 665/665 Running scriptlet: urw-base35-nimbus-sans-fonts-20200910-18.fc39.no 665/665 Running scriptlet: urw-base35-p052-fonts-20200910-18.fc39.noarch 665/665 Running scriptlet: urw-base35-standard-symbols-ps-fonts-20200910-18 665/665 Running scriptlet: urw-base35-z003-fonts-20200910-18.fc39.noarch 665/665 Running scriptlet: fontconfig-2.15.0-1.fc40.s390x 665/665 Running scriptlet: python3-configargparse-1.7-1.fc40.noarch 665/665 Installed: abattis-cantarell-vf-fonts-0.301-10.fc39.noarch adobe-mappings-cmap-20230622-1.fc39.noarch adobe-mappings-cmap-deprecated-20230622-1.fc39.noarch adobe-mappings-pdf-20190401-5.fc39.noarch at-spi2-core-2.50.0-1.fc40.s390x atk-2.50.0-1.fc40.s390x avahi-libs-0.8-24.fc39.s390x biber-2.19-3.fc39.noarch cairo-1.18.0-1.fc40.s390x cairo-gobject-1.18.0-1.fc40.s390x clisp-2.49.93-35.20230718git6692497.fc40.s390x cups-libs-1:2.4.7-6.fc40.s390x dbus-1:1.14.10-1.fc40.s390x dbus-broker-35-2.fc40.s390x dbus-common-1:1.14.10-1.fc40.noarch dbus-libs-1:1.14.10-1.fc40.s390x default-fonts-core-sans-4.0-9.fc40.noarch desktop-file-utils-0.26-9.fc39.s390x emacs-filesystem-1:29.1-14.fc40.noarch expat-2.5.0-3.fc39.s390x fcgi-2.4.0-47.fc39.s390x ffcall-2.4-6.fc39.s390x flexiblas-3.3.1-5.fc39.s390x flexiblas-netlib-3.3.1-5.fc39.s390x flexiblas-openblas-openmp-3.3.1-5.fc39.s390x fontconfig-2.15.0-1.fc40.s390x fonts-filesystem-1:2.0.5-12.fc39.noarch freetype-2.13.1-2.fc39.s390x fribidi-1.0.13-2.fc39.s390x gc-8.2.2-4.fc39.s390x gd-2.3.3-12.fc39.s390x gdk-pixbuf2-2.42.10-5.fc39.s390x gdk-pixbuf2-modules-2.42.10-5.fc39.s390x ghostscript-10.02.1-4.fc40.s390x ghostscript-tools-fonts-10.02.1-4.fc40.s390x ghostscript-tools-printing-10.02.1-4.fc40.s390x giflib-5.2.1-17.fc40.s390x glib2-2.78.3-1.fc40.s390x gnutls-3.8.2-2.fc40.s390x google-droid-sans-fonts-20200215-17.fc40.noarch google-noto-fonts-common-20230801-4.fc40.noarch google-noto-sans-vf-fonts-20230801-4.fc40.noarch graphite2-1.3.14-13.fc40.s390x groff-base-1.23.0-3.fc40.s390x gtk-update-icon-cache-3.24.39-1.fc40.s390x gtk2-2.24.33-15.fc39.s390x guile22-2.2.7-9.fc39.s390x gumbo-parser-1:0.10.1-29.fc39.s390x harfbuzz-8.3.0-2.fc40.s390x help2man-1.49.3-3.fc39.noarch hicolor-icon-theme-0.17-16.fc39.noarch highway-1.0.7-1.fc40.s390x jbig2dec-libs-0.20-1.fc40.s390x jbigkit-libs-2.1-27.fc40.s390x latexmk-4.82-1.fc40.noarch lcms2-2.15-2.fc39.s390x leptonica-1.84.1-1.fc40.s390x libICE-1.1.1-1.fc40.s390x libSM-1.2.4-1.fc40.s390x libX11-1.8.7-1.fc40.s390x libX11-common-1.8.7-1.fc40.noarch libX11-xcb-1.8.7-1.fc40.s390x libXau-1.0.11-4.fc40.s390x libXaw-1.0.15-1.fc40.s390x libXcomposite-0.4.6-1.fc40.s390x libXcursor-1.2.1-5.fc40.s390x libXdamage-1.1.6-1.fc40.s390x libXext-1.3.5-4.fc40.s390x libXfixes-6.0.1-1.fc40.s390x libXft-2.3.8-4.fc40.s390x libXi-1.8.1-3.fc40.s390x libXinerama-1.1.5-4.fc40.s390x libXmu-1.1.4-4.fc40.s390x libXpm-3.5.17-1.fc40.s390x libXrandr-1.5.4-1.fc40.s390x libXrender-0.9.11-4.fc40.s390x libXt-1.3.0-1.fc40.s390x libXtst-1.2.4-4.fc40.s390x libXxf86vm-1.1.5-4.fc40.s390x libaom-3.8.0-1.fc40.s390x libavif-0.11.1-11.fc39.s390x libb2-0.98.1-9.fc39.s390x libdatrie-0.2.13-7.fc39.s390x libdav1d-1.2.1-2.fc39.s390x libdb-5.3.28-58.fc40.s390x libdrm-2.4.117-1.fc40.s390x libgfortran-13.2.1-6.fc40.s390x libglade2-2.6.4-30.fc39.s390x libglvnd-1:1.7.0-1.fc40.s390x libglvnd-glx-1:1.7.0-1.fc40.s390x libgs-10.02.1-4.fc40.s390x libicu-73.2-3.fc40.s390x libijs-0.35-19.fc39.s390x libimagequant-4.0.3-2.fc40.s390x libjpeg-turbo-2.1.4-3.fc39.s390x libjxl-1:0.8.2-3.fc40.s390x liblerc-4.0.0-4.fc39.s390x libpaper-1:2.1.1-1.fc39.s390x libpng-2:1.6.40-1.fc40.s390x libpq-16.1-1.fc40.s390x librsvg2-2.57.1-1.fc40.s390x librsvg2-tools-2.57.1-1.fc40.s390x libsvm-3.32-2.fc39.s390x libthai-0.1.29-6.fc39.s390x libtiff-4.5.0-3.fc40.s390x libtool-ltdl-2.4.7-8.fc40.s390x libwebp-1.3.2-2.fc40.s390x libxcb-1.16-2.fc40.s390x libxshmfence-1.3.2-1.fc40.s390x libxslt-1.1.39-1.fc40.s390x mailcap-2.1.54-2.fc39.noarch make-1:4.4.1-2.fc39.s390x mesa-libGL-23.3.2-4.fc40.s390x mesa-libglapi-23.3.2-4.fc40.s390x mpdecimal-2.5.1-7.fc39.s390x mupdf-1.23.7-3.fc40.s390x ncurses-6.4-8.20231001.fc40.s390x nettle-3.9.1-2.fc39.s390x openblas-0.3.25-1.fc40.s390x openblas-openmp-0.3.25-1.fc40.s390x openjpeg2-2.5.0-5.fc40.s390x pango-1.51.0-1.fc40.s390x pari-2.15.4-2.fc39.s390x perl-Authen-SASL-2.1700-1.fc40.noarch perl-AutoLoader-5.74-503.fc40.noarch perl-B-1.88-503.fc40.s390x perl-B-Hooks-EndOfScope-0.26-7.fc39.noarch perl-Business-ISBN-3.008-2.fc39.noarch perl-Business-ISBN-Data-20231220.001-1.fc40.noarch perl-Business-ISMN-1.203-2.fc39.noarch perl-Business-ISSN-1.005-8.fc39.noarch perl-Carp-1.54-500.fc39.noarch perl-Class-Accessor-0.51-18.fc39.noarch perl-Class-Data-Inheritable-0.09-6.fc39.noarch perl-Class-Inspector-1.36-14.fc39.noarch perl-Class-Method-Modifiers-2.15-2.fc39.noarch perl-Class-Singleton-1.6-9.fc39.noarch perl-Class-Struct-0.68-503.fc40.noarch perl-Clone-0.46-4.fc39.s390x perl-Compress-Raw-Bzip2-2.206-1.fc39.s390x perl-Compress-Raw-Zlib-2.206-1.fc39.s390x perl-Convert-ASN1-0.34-1.fc40.noarch perl-Data-Compare-1.29-2.fc39.noarch perl-Data-Dump-1.25-8.fc39.noarch perl-Data-Dumper-2.188-501.fc39.s390x perl-Data-OptList-0.114-2.fc39.noarch perl-Data-Uniqid-0.12-31.fc39.noarch perl-Date-ISO8601-0.005-18.fc39.noarch perl-Date-Manip-6.93-2.fc40.noarch perl-DateTime-2:1.65-1.fc40.s390x perl-DateTime-Calendar-Julian-0.107-5.fc39.noarch perl-DateTime-Format-Builder-0.8300-11.fc39.noarch perl-DateTime-Format-Strptime-1:1.79-8.fc39.noarch perl-DateTime-Locale-1.40-1.fc40.noarch perl-DateTime-TimeZone-2.61-1.fc40.noarch perl-DateTime-TimeZone-SystemV-0.010-19.fc39.noarch perl-DateTime-TimeZone-Tzfile-0.011-19.fc39.noarch perl-Devel-CallChecker-0.009-3.fc39.s390x perl-Devel-Caller-2.07-3.fc39.s390x perl-Devel-GlobalDestruction-0.14-22.fc39.noarch perl-Devel-LexAlias-0.05-34.fc39.s390x perl-Devel-StackTrace-1:2.04-16.fc39.noarch perl-Digest-1.20-500.fc39.noarch perl-Digest-HMAC-1.04-8.fc39.noarch perl-Digest-MD5-2.59-1.fc40.s390x perl-Digest-SHA-1:6.04-501.fc39.s390x perl-Dist-CheckConflicts-0.11-28.fc39.noarch perl-DynaLoader-1.54-503.fc40.s390x perl-DynaLoader-Functions-0.004-2.fc39.noarch perl-Email-Date-Format-1.008-2.fc39.noarch perl-Encode-4:3.20-501.fc40.s390x perl-Encode-Locale-1.05-27.fc39.noarch perl-English-1.11-503.fc40.noarch perl-Env-1.06-500.fc39.noarch perl-Errno-1.37-503.fc40.s390x perl-Eval-Closure-0.14-21.fc39.noarch perl-Exception-Class-1.45-8.fc39.noarch perl-Exporter-5.78-1.fc40.noarch perl-ExtUtils-MM-Utils-2:7.70-501.fc39.noarch perl-Fcntl-1.15-503.fc40.s390x perl-File-Basename-2.86-503.fc40.noarch perl-File-Compare-1.100.700-503.fc40.noarch perl-File-Copy-2.41-503.fc40.noarch perl-File-Find-1.43-503.fc40.noarch perl-File-Find-Rule-0.34-26.fc39.noarch perl-File-Listing-6.16-1.fc39.noarch perl-File-Path-2.18-501.fc40.noarch perl-File-ShareDir-1.118-9.fc39.noarch perl-File-Slurper-0.014-3.fc39.noarch perl-File-Temp-1:0.231.100-501.fc40.noarch perl-File-stat-1.13-503.fc40.noarch perl-FileHandle-2.05-503.fc40.noarch perl-Filter-2:1.64-501.fc39.s390x perl-GSSAPI-0.28-43.fc39.s390x perl-Getopt-Long-1:2.57-1.fc40.noarch perl-Getopt-Std-1.13-503.fc40.noarch perl-HTML-Parser-3.81-3.fc39.s390x perl-HTML-Tagset-3.20-55.fc40.noarch perl-HTTP-Cookies-6.11-1.fc40.noarch perl-HTTP-Date-6.06-2.fc39.noarch perl-HTTP-Message-6.45-1.fc40.noarch perl-HTTP-Negotiate-6.01-36.fc39.noarch perl-HTTP-Tiny-0.088-3.fc39.noarch perl-Hash-Util-FieldHash-1.26-503.fc40.s390x perl-I18N-LangTags-0.45-503.fc40.noarch perl-I18N-Langinfo-0.22-503.fc40.s390x perl-IO-1.52-503.fc40.s390x perl-IO-Compress-2.206-1.fc39.noarch perl-IO-HTML-1.004-11.fc39.noarch perl-IO-Socket-IP-0.42-1.fc39.noarch perl-IO-Socket-SSL-2.084-1.fc40.noarch perl-IO-String-1.08-48.fc39.noarch perl-IPC-Cmd-2:1.04-502.fc40.noarch perl-IPC-Open3-1.22-503.fc40.noarch perl-IPC-Run3-0.048-29.fc39.noarch perl-IPC-SysV-2.09-503.fc40.s390x perl-IPC-System-Simple-1.30-11.fc39.noarch perl-JSON-4.10-3.fc39.noarch perl-LDAP-1:0.68-11.fc39.noarch perl-LWP-MediaTypes-6.04-15.fc39.noarch perl-LWP-Protocol-https-6.11-1.fc39.noarch perl-Lingua-Translit-0.29-4.fc39.noarch perl-List-AllUtils-0.19-10.fc39.noarch perl-List-SomeUtils-0.59-3.fc39.noarch perl-List-UtilsBy-0.12-7.fc39.noarch perl-Locale-Maketext-1.33-501.fc39.noarch perl-Locale-Maketext-Simple-1:0.21-503.fc40.noarch perl-Log-Dispatch-2.71-2.fc39.noarch perl-Log-Dispatch-FileRotate-1.38-7.fc39.noarch perl-Log-Log4perl-1.57-3.fc39.noarch perl-MIME-Base64-3.16-501.fc40.s390x perl-MIME-Charset-1.013.1-3.fc39.noarch perl-MIME-Lite-3.033-8.fc39.noarch perl-MIME-Types-2.24-3.fc39.noarch perl-MRO-Compat-0.15-7.fc39.noarch perl-Mail-Sender-1:0.903-22.fc39.noarch perl-Mail-Sendmail-0.80-18.fc39.noarch perl-MailTools-2.21-14.fc39.noarch perl-Math-BigInt-1:2.0030.01-1.fc40.noarch perl-Math-Complex-1.62-503.fc40.noarch perl-Module-CoreList-1:5.20231230-1.fc40.noarch perl-Module-Implementation-0.09-37.fc39.noarch perl-Module-Load-1:0.36-501.fc40.noarch perl-Module-Load-Conditional-0.74-501.fc40.noarch perl-Module-Metadata-1.000038-3.fc39.noarch perl-Module-Runtime-0.016-20.fc39.noarch perl-Mozilla-CA-20231213-1.fc40.noarch perl-NTLM-1.09-36.fc39.noarch perl-Net-HTTP-6.23-2.fc39.noarch perl-Net-SMTP-SSL-1.04-22.fc40.noarch perl-Net-SSLeay-1.92-10.fc39.s390x perl-Number-Compare-0.03-36.fc39.noarch perl-Opcode-1.64-503.fc40.s390x perl-POSIX-2.13-503.fc40.s390x perl-Package-Generator-1.106-29.fc39.noarch perl-Package-Stash-0.40-5.fc39.noarch perl-Package-Stash-XS-0.30-5.fc39.s390x perl-PadWalker-2.5-10.fc39.s390x perl-Params-Check-1:0.38-500.fc39.noarch perl-Params-Classify-0.015-20.fc39.s390x perl-Params-Util-1.102-12.fc39.s390x perl-Params-Validate-1.31-5.fc39.s390x perl-Params-ValidationCompiler-0.31-3.fc39.noarch perl-Parse-RecDescent-1.967015-20.fc39.noarch perl-PathTools-3.89-500.fc39.s390x perl-Pod-Escapes-1:1.07-501.fc40.noarch perl-Pod-Html-1.34-503.fc40.noarch perl-Pod-Perldoc-3.28.01-501.fc39.noarch perl-Pod-Simple-1:3.45-4.fc39.noarch perl-Pod-Usage-4:2.03-500.fc39.noarch perl-Ref-Util-0.204-18.fc39.noarch perl-Ref-Util-XS-0.117-20.fc39.s390x perl-Regexp-Common-2017060201-22.fc39.noarch perl-Role-Tiny-2.002004-9.fc39.noarch perl-Safe-2.44-503.fc40.noarch perl-Scalar-List-Utils-5:1.63-500.fc39.s390x perl-SelectSaver-1.02-503.fc40.noarch perl-Socket-4:2.037-3.fc39.s390x 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perl-TimeDate-1:2.33-11.fc39.noarch perl-Try-Tiny-0.31-6.fc39.noarch perl-URI-5.21-1.fc40.noarch perl-Unicode-Collate-1.31-500.fc39.s390x perl-Unicode-LineBreak-2019.001-18.fc39.s390x perl-Unicode-Normalize-1.32-500.fc39.s390x perl-Unicode-UCD-0.78-503.fc40.noarch perl-Variable-Magic-0.63-4.fc39.s390x perl-WWW-RobotRules-6.02-37.fc39.noarch perl-XML-LibXML-1:2.0209-3.fc40.s390x perl-XML-LibXML-Simple-1.01-12.fc39.noarch perl-XML-LibXSLT-2.002.001-3.fc39.s390x perl-XML-NamespaceSupport-1.12-21.fc40.noarch perl-XML-Parser-2.47-1.fc40.s390x perl-XML-SAX-1.02-13.fc39.noarch perl-XML-SAX-Base-1.09-21.fc40.noarch perl-XML-Writer-0.900-12.fc39.noarch perl-XML-XPath-1.48-4.fc39.noarch perl-XString-0.005-10.fc39.s390x perl-autodie-2.37-1.fc40.noarch perl-autovivification-0.18-20.fc39.s390x perl-base-2.27-503.fc40.noarch perl-constant-1.33-501.fc39.noarch perl-deprecate-0.04-503.fc40.noarch perl-encoding-4:3.00-501.fc40.s390x perl-if-0.61.000-503.fc40.noarch 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texlive-hyph-utf8-11:svn61719-70.fc40.noarch texlive-hyphen-base-11:svn66413-70.fc40.noarch texlive-hyphenex-11:svn57387-70.fc40.noarch texlive-ifmtarg-11:svn47544-70.fc40.noarch texlive-ifplatform-11:svn45533-70.fc40.noarch texlive-iftex-11:svn61910-70.fc40.noarch texlive-index-11:svn24099.4.1beta-70.fc40.noarch texlive-infwarerr-11:svn53023-70.fc40.noarch texlive-intcalc-11:svn53168-70.fc40.noarch texlive-kastrup-11:svn15878.0-70.fc40.noarch texlive-knuth-lib-11:svn57963-70.fc40.noarch texlive-knuth-local-11:svn57963-70.fc40.noarch texlive-koma-script-11:svn64685-70.fc40.noarch texlive-kpathsea-11:svn66209-77.fc39.s390x texlive-kvdefinekeys-11:svn53193-70.fc40.noarch texlive-kvoptions-11:svn63622-70.fc40.noarch texlive-kvsetkeys-11:svn64632-70.fc40.noarch texlive-l3backend-11:svn65573-70.fc40.noarch texlive-l3kernel-11:svn66094-70.fc40.noarch texlive-l3packages-11:svn65722-70.fc40.noarch texlive-latex-11:svn65161-77.fc39.noarch texlive-latex-fonts-11:svn28888.0-70.fc40.noarch texlive-latex-lab-11:svn64892-70.fc40.noarch texlive-latexconfig-11:svn53525-70.fc40.noarch texlive-letltxmacro-11:svn53022-70.fc40.noarch texlive-lib-11:20230311-77.fc39.s390x texlive-listings-11:svn66222-70.fc40.noarch texlive-lm-11:svn65956-70.fc40.noarch texlive-lm-math-11:svn36915.1.959-70.fc40.noarch texlive-logreq-11:svn53003-70.fc40.noarch texlive-ltxcmds-11:svn56421-70.fc40.noarch texlive-ltxmisc-11:svn21927.0-70.fc40.noarch texlive-lua-alt-getopt-11:svn56414-70.fc40.noarch texlive-lua-uni-algos-11:svn62204-70.fc40.noarch texlive-luabidi-11:svn54512-70.fc40.noarch texlive-luahbtex-11:svn66186-77.fc39.s390x texlive-lualatex-math-11:svn61464-70.fc40.noarch texlive-lualibs-11:svn64615-70.fc40.noarch texlive-luaotfload-11:svn64616-77.fc39.noarch texlive-luatex-11:svn66967-77.fc39.s390x texlive-luatex85-11:svn41456-70.fc40.noarch texlive-luatexbase-11:svn52663-70.fc40.noarch texlive-makecmds-11:svn15878.0-70.fc40.noarch texlive-makeindex-11:svn62517-77.fc39.s390x 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texlive-palatino-11:svn61719-70.fc40.noarch texlive-paralist-11:svn43021-70.fc40.noarch texlive-parallel-11:svn15878.0-70.fc40.noarch texlive-parskip-11:svn58358-70.fc40.noarch texlive-pdfcol-11:svn64469-70.fc40.noarch texlive-pdfcolmk-11:svn52912-70.fc40.noarch texlive-pdfescape-11:svn53082-70.fc40.noarch texlive-pdftex-11:svn66243-77.fc39.s390x texlive-pdftexcmds-11:svn55777-70.fc40.noarch texlive-pgf-11:svn65553-70.fc40.noarch texlive-picture-11:svn54867-70.fc40.noarch texlive-placeins-11:svn19848.2.2-70.fc40.noarch texlive-plain-11:svn57963-70.fc40.noarch texlive-polyglossia-11:svn65792-70.fc40.noarch texlive-pslatex-11:svn57434-70.fc40.noarch texlive-psnfss-11:svn54694-70.fc40.noarch texlive-pspicture-11:svn15878.0-70.fc40.noarch texlive-pst-3d-11:svn17257.1.10-70.fc40.noarch texlive-pst-coil-11:svn62977-70.fc40.noarch texlive-pst-eps-11:svn15878.1.0-70.fc40.noarch texlive-pst-fill-11:svn60671-70.fc40.noarch texlive-pst-grad-11:svn15878.1.06-70.fc40.noarch texlive-pst-math-11:svn64732-70.fc40.noarch texlive-pst-node-11:svn61838-70.fc40.noarch texlive-pst-ovl-11:svn54963-70.fc40.noarch texlive-pst-plot-11:svn65346-70.fc40.noarch texlive-pst-text-11:svn49542-70.fc40.noarch texlive-pst-tools-11:svn60621-70.fc40.noarch texlive-pst-tree-11:svn60421-70.fc40.noarch texlive-pstricks-11:svn65346-70.fc40.noarch texlive-pstricks-add-11:svn65067-70.fc40.noarch texlive-pxfonts-11:svn15878.0-70.fc40.noarch texlive-ragged2e-11:svn66152-70.fc40.noarch texlive-refcount-11:svn53164-70.fc40.noarch texlive-rerunfilecheck-11:svn63869-70.fc40.noarch texlive-rsfs-11:svn15878.0-70.fc40.noarch texlive-sauerj-11:svn15878.0-70.fc40.noarch texlive-setspace-11:svn65206-70.fc40.noarch texlive-showexpl-11:svn57414-70.fc40.noarch texlive-stringenc-11:svn52982-70.fc40.noarch texlive-subfig-11:svn15878.1.3-70.fc40.noarch texlive-symbol-11:svn61719-70.fc40.noarch texlive-tabulary-11:svn34368.0.10-70.fc40.noarch texlive-tex-11:svn66186-77.fc39.s390x texlive-tex-gyre-11:svn65956-70.fc40.noarch texlive-tex-gyre-math-11:svn41264-70.fc40.noarch texlive-tex-ini-files-11:svn40533-70.fc40.noarch texlive-texlive-common-doc-11:svn54176-70.fc40.noarch texlive-texlive-en-11:svn66572-77.fc39.noarch texlive-texlive-msg-translations-11:svn66593-70.fc40.noarch texlive-texlive-scripts-11:svn66584-77.fc39.noarch texlive-texlive.infra-11:svn66512-77.fc39.noarch texlive-times-11:svn61719-70.fc40.noarch texlive-tipa-11:svn29349.1.3-70.fc40.noarch texlive-titlesec-11:svn59845-70.fc40.noarch texlive-tools-11:svn64892-70.fc40.noarch texlive-txfonts-11:svn15878.0-70.fc40.noarch texlive-ucharcat-11:svn38907-70.fc40.noarch texlive-ucs-11:svn64114-70.fc40.noarch texlive-underscore-11:svn18261.0-70.fc40.noarch texlive-unicode-data-11:svn64423-70.fc40.noarch texlive-unicode-math-11:svn61719-70.fc40.noarch texlive-uniquecounter-11:svn53162-70.fc40.noarch texlive-upquote-11:svn26059.v1.3-70.fc40.noarch texlive-url-11:svn32528.3.4-70.fc40.noarch texlive-utopia-11:svn15878.0-70.fc40.noarch texlive-varwidth-11:svn24104.0.92-70.fc40.noarch texlive-wasy-11:svn53533-70.fc40.noarch texlive-wasy-type1-11:svn53534-70.fc40.noarch texlive-wasysym-11:svn54080-70.fc40.noarch texlive-wrapfig-11:svn61719-70.fc40.noarch texlive-xcolor-11:svn63563-70.fc40.noarch texlive-xdvi-11:svn62387-77.fc39.s390x texlive-xetex-11:svn66203-77.fc39.s390x texlive-xetexconfig-11:svn45845-70.fc40.noarch texlive-xifthen-11:svn38929-70.fc40.noarch texlive-xindy-11:svn65958-77.fc39.s390x texlive-xkeyval-11:svn63616-70.fc40.noarch texlive-xpatch-11:svn54563-70.fc40.noarch texlive-xstring-11:svn65551-70.fc40.noarch texlive-xunicode-11:svn30466.0.981-70.fc40.noarch texlive-zapfchan-11:svn61719-70.fc40.noarch texlive-zapfding-11:svn61719-70.fc40.noarch texlive-zref-11:svn62977-70.fc40.noarch tzdata-2023d-1.fc40.noarch urw-base35-bookman-fonts-20200910-18.fc39.noarch urw-base35-c059-fonts-20200910-18.fc39.noarch urw-base35-d050000l-fonts-20200910-18.fc39.noarch urw-base35-fonts-20200910-18.fc39.noarch urw-base35-fonts-common-20200910-18.fc39.noarch urw-base35-gothic-fonts-20200910-18.fc39.noarch urw-base35-nimbus-mono-ps-fonts-20200910-18.fc39.noarch urw-base35-nimbus-roman-fonts-20200910-18.fc39.noarch urw-base35-nimbus-sans-fonts-20200910-18.fc39.noarch urw-base35-p052-fonts-20200910-18.fc39.noarch urw-base35-standard-symbols-ps-fonts-20200910-18.fc39.noarch urw-base35-z003-fonts-20200910-18.fc39.noarch vim-filesystem-2:9.0.2190-1.fc40.noarch xdg-utils-1.2.0~git20231511.21fb316-1.fc40.noarch xml-common-0.6.3-62.fc40.noarch xpdf-libs-1:4.04-10.fc39.s390x xprop-1.2.5-4.fc39.s390x zziplib-0.13.72-5.fc39.s390x Complete! Finish: build setup for snakemake-7.32.4-3.fc40.src.rpm Start: rpmbuild snakemake-7.32.4-3.fc40.src.rpm Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%prep): /bin/sh -e /var/tmp/rpm-tmp.LMvqa7 + umask 022 + cd /builddir/build/BUILD + cd /builddir/build/BUILD + rm -rf snakemake-7.32.4 + /usr/lib/rpm/rpmuncompress -x /builddir/build/SOURCES/snakemake-7.32.4.tar.gz + STATUS=0 + '[' 0 -ne 0 ']' + cd snakemake-7.32.4 + rm -rf /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + /usr/bin/mkdir -p /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + /usr/bin/chmod -Rf a+rX,u+w,g-w,o-w . + /usr/lib/rpm/rpmuncompress /builddir/build/SOURCES/snakemake-7.11.0-docs-no-animated-demo.patch + /usr/bin/patch -p1 -s --fuzz=0 --no-backup-if-mismatch -f + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP . recursedown('.') recursedown('./.github') 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recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/two/plots/alpha~2') recursedown('./tests/test_paramspace/expected-results/results/two/simulations') recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~1') recursedown('./tests/test_paramspace/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace/scripts') recursedown('./tests/test_paramspace_single_wildcard') recursedown('./tests/test_paramspace_single_wildcard/expected-results') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/default/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/plots/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~1/beta~0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/empty/simulations/alpha~2/beta~0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/filenamesep/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/full_reorder/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/plots/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~1/gamma~0.99') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/one/simulations/alpha~2/gamma~3.9') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/plots/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_1/beta_is_0.1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep/simulations/alpha_is_2/beta_is_0.0') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/sep_and_pattern/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/plots/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~1') recursedown('./tests/test_paramspace_single_wildcard/expected-results/results/two/simulations/alpha~2') recursedown('./tests/test_paramspace_single_wildcard/scripts') recursedown('./tests/test_parser') recursedown('./tests/test_parser/expected-results') recursedown('./tests/test_parsing_terminal_comment_following_statement') recursedown('./tests/test_parsing_terminal_comment_following_statement/expected-results') recursedown('./tests/test_pathlib') recursedown('./tests/test_pathlib/expected-results') recursedown('./tests/test_pathlib/expected-results/outdir') recursedown('./tests/test_pathlib/expected-results/outdir/function_unpacking') recursedown('./tests/test_pathlib_missing_file') recursedown('./tests/test_pathlib_missing_file/expected-results') recursedown('./tests/test_peppy') recursedown('./tests/test_peppy/expected-results') recursedown('./tests/test_peppy/pep') recursedown('./tests/test_peppy/workflow') recursedown('./tests/test_peppy/workflow/schemas') recursedown('./tests/test_persistent_dict') recursedown('./tests/test_persistent_dict/expected-results') recursedown('./tests/test_pipe_depend') recursedown('./tests/test_pipe_depend/expected-results') recursedown('./tests/test_pipes') recursedown('./tests/test_pipes/expected-results') recursedown('./tests/test_pipes2') recursedown('./tests/test_pipes2/expected-results') recursedown('./tests/test_pipes_fail') recursedown('./tests/test_pipes_fail/expected-results') recursedown('./tests/test_pipes_multiple') recursedown('./tests/test_pipes_multiple/expected-results') recursedown('./tests/test_prebuilt_conda_script') recursedown('./tests/test_prebuilt_conda_script/dummy_package') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy') recursedown('./tests/test_prebuilt_conda_script/dummy_package/src/dummy.egg-info') recursedown('./tests/test_prebuilt_conda_script/expected-results') recursedown('./tests/test_profile') recursedown('./tests/test_profile/expected-results') recursedown('./tests/test_protected_symlink_output') recursedown('./tests/test_protected_symlink_output/expected-results') recursedown('./tests/test_r_wrapper') recursedown('./tests/test_remote') recursedown('./tests/test_remote/expected-results') recursedown('./tests/test_remote_auto') recursedown('./tests/test_remote_auto/expected-results') recursedown('./tests/test_remote_azure') recursedown('./tests/test_remote_gs') recursedown('./tests/test_remote_gs/expected-results') recursedown('./tests/test_remote_http') recursedown('./tests/test_remote_http/expected-results') recursedown('./tests/test_remote_irods') recursedown('./tests/test_remote_irods/expected-results') recursedown('./tests/test_remote_irods/setup-data') recursedown('./tests/test_remote_irods/test-data') recursedown('./tests/test_remote_log') recursedown('./tests/test_remote_log/expected-results') recursedown('./tests/test_remote_ncbi') recursedown('./tests/test_remote_ncbi/expected-results') recursedown('./tests/test_remote_ncbi_simple') recursedown('./tests/test_remote_ncbi_simple/expected-results') recursedown('./tests/test_remote_sftp') recursedown('./tests/test_remote_sftp/expected-results') recursedown('./tests/test_remote_zenodo') recursedown('./tests/test_remote_zenodo/expected-results') recursedown('./tests/test_report') recursedown('./tests/test_report/.snakemake') recursedown('./tests/test_report/.snakemake/metadata') recursedown('./tests/test_report/data') recursedown('./tests/test_report/envs') recursedown('./tests/test_report/expected-results') recursedown('./tests/test_report/report') recursedown('./tests/test_report/testdir') recursedown('./tests/test_report_dir') recursedown('./tests/test_report_dir/expected-results') recursedown('./tests/test_report_dir/test') recursedown('./tests/test_report_dir/test/js') recursedown('./tests/test_report_display_code') recursedown('./tests/test_report_display_code/expected-results') recursedown('./tests/test_report_zip') recursedown('./tests/test_report_zip/.snakemake') recursedown('./tests/test_report_zip/.snakemake/metadata') recursedown('./tests/test_report_zip/data') recursedown('./tests/test_report_zip/envs') recursedown('./tests/test_report_zip/expected-results') recursedown('./tests/test_report_zip/report') recursedown('./tests/test_report_zip/testdir') recursedown('./tests/test_restartable_job_cmd_exit_1') recursedown('./tests/test_restartable_job_cmd_exit_1/expected-results') recursedown('./tests/test_restartable_job_qsub_exit_1') recursedown('./tests/test_restartable_job_qsub_exit_1/expected-results') recursedown('./tests/test_retries') recursedown('./tests/test_retries/expected-results') recursedown('./tests/test_retries_not_overriden') recursedown('./tests/test_retries_not_overriden/expected-results') recursedown('./tests/test_rule_defined_in_for_loop') recursedown('./tests/test_rule_defined_in_for_loop/expected-results') recursedown('./tests/test_rule_inheritance_globals') recursedown('./tests/test_rule_inheritance_globals/.snakemake') recursedown('./tests/test_rule_inheritance_globals/.snakemake/metadata') recursedown('./tests/test_rule_inheritance_globals/expected-results') recursedown('./tests/test_ruledag') recursedown('./tests/test_ruledeps') recursedown('./tests/test_ruledeps/expected-results') recursedown('./tests/test_run_namedlist') recursedown('./tests/test_run_namedlist/expected-results') recursedown('./tests/test_same_wildcard') recursedown('./tests/test_same_wildcard/expected-results') recursedown('./tests/test_scatter_gather') recursedown('./tests/test_scatter_gather/expected-results') recursedown('./tests/test_scatter_gather/expected-results/gathered') recursedown('./tests/test_scatter_gather/expected-results/splitted') recursedown('./tests/test_scatter_gather_multiple_processes') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/gathered') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_a') recursedown('./tests/test_scatter_gather_multiple_processes/expected-results/split_b') recursedown('./tests/test_script') recursedown('./tests/test_script/envs') recursedown('./tests/test_script/expected-results') recursedown('./tests/test_script/scripts') recursedown('./tests/test_script_py') recursedown('./tests/test_script_py/expected-results') recursedown('./tests/test_script_py/scripts') recursedown('./tests/test_service_jobs') recursedown('./tests/test_service_jobs/expected-results') recursedown('./tests/test_set_resources') recursedown('./tests/test_set_resources/expected-results') recursedown('./tests/test_shadow') recursedown('./tests/test_shadow/expected-results') recursedown('./tests/test_shadow_copy') recursedown('./tests/test_shadow_copy/expected-results') recursedown('./tests/test_shadow_prefix') recursedown('./tests/test_shadow_prefix/expected-results') recursedown('./tests/test_shadowed_log') recursedown('./tests/test_shadowed_log/expected-results') recursedown('./tests/test_shell') recursedown('./tests/test_shell/expected-results') recursedown('./tests/test_singularity') recursedown('./tests/test_singularity/expected-results') recursedown('./tests/test_singularity_conda') recursedown('./tests/test_singularity_conda/expected-results') recursedown('./tests/test_singularity_global') recursedown('./tests/test_singularity_global/expected-results') recursedown('./tests/test_singularity_module') recursedown('./tests/test_singularity_module/expected-results') recursedown('./tests/test_singularity_none') recursedown('./tests/test_singularity_none/expected-results') recursedown('./tests/test_slurm_mpi') recursedown('./tests/test_slurm_mpi/envs') recursedown('./tests/test_slurm_mpi/expected-results') recursedown('./tests/test_solver') recursedown('./tests/test_solver/expected-results') recursedown('./tests/test_source_path') recursedown('./tests/test_source_path/expected-results') recursedown('./tests/test_source_path/workflow') recursedown('./tests/test_source_path/workflow/resources') recursedown('./tests/test_spaces_in_fnames') recursedown('./tests/test_spaces_in_fnames/expected-results') recursedown('./tests/test_speed') recursedown('./tests/test_srcdir') recursedown('./tests/test_srcdir/expected-results') recursedown('./tests/test_static_remote') recursedown('./tests/test_static_remote/expected-results') recursedown('./tests/test_strict_mode') recursedown('./tests/test_strict_mode/expected-results') recursedown('./tests/test_string_resources') recursedown('./tests/test_string_resources/expected-results') recursedown('./tests/test_subworkflow_config') recursedown('./tests/test_subworkflow_config/expected-results') recursedown('./tests/test_subworkflows') recursedown('./tests/test_subworkflows/expected-results') recursedown('./tests/test_symlink_temp') recursedown('./tests/test_symlink_temp/expected-results') recursedown('./tests/test_symlink_time_handling') recursedown('./tests/test_symlink_time_handling/expected-results') recursedown('./tests/test_temp') recursedown('./tests/test_temp/expected-results') recursedown('./tests/test_temp_expand') recursedown('./tests/test_temp_expand/expected-results') recursedown('./tests/test_template_engine') recursedown('./tests/test_template_engine/expected-results') recursedown('./tests/test_tes') recursedown('./tests/test_tes/expected-results') recursedown('./tests/test_threads') recursedown('./tests/test_threads/expected-results') recursedown('./tests/test_threads0') recursedown('./tests/test_threads0/expected-results') recursedown('./tests/test_tibanna') recursedown('./tests/test_tibanna/expected-results') recursedown('./tests/test_tibanna/scripts') recursedown('./tests/test_tmpdir') recursedown('./tests/test_tmpdir/expected-results') recursedown('./tests/test_touch') recursedown('./tests/test_touch/expected-results') recursedown('./tests/test_touch_pipeline_with_temp_dir') recursedown('./tests/test_touch_pipeline_with_temp_dir/expected-results') recursedown('./tests/test_touch_remote_prefix') recursedown('./tests/test_touch_remote_prefix/expected-results') recursedown('./tests/test_touch_with_directories') recursedown('./tests/test_touch_with_directories/expected-results') recursedown('./tests/test_unpack_dict') recursedown('./tests/test_unpack_dict/expected-results') recursedown('./tests/test_unpack_list') recursedown('./tests/test_unpack_list/expected-results') recursedown('./tests/test_until') recursedown('./tests/test_until/expected-results') recursedown('./tests/test_update_config') recursedown('./tests/test_update_config/expected-results') recursedown('./tests/test_url_include') recursedown('./tests/test_url_include/expected-results') recursedown('./tests/test_use_rule_same_module') recursedown('./tests/test_use_rule_same_module/expected-results') recursedown('./tests/test_validate') recursedown('./tests/test_validate/expected-results') recursedown('./tests/test_wildcard_count_ambiguity') recursedown('./tests/test_wildcard_count_ambiguity/expected-results') recursedown('./tests/test_wildcard_keyword') recursedown('./tests/test_wildcard_keyword/expected-results') recursedown('./tests/test_workflow_profile') recursedown('./tests/test_workflow_profile/dummy-general-profile') recursedown('./tests/test_workflow_profile/expected-results') recursedown('./tests/test_workflow_profile/workflow') recursedown('./tests/test_workflow_profile/workflow/profiles') recursedown('./tests/test_workflow_profile/workflow/profiles/default') recursedown('./tests/test_wrapper') recursedown('./tests/test_wrapper/expected-results') recursedown('./tests/test_xrootd') recursedown('./tests/test_yaml_config') recursedown('./tests/test_yaml_config/expected-results') + sed -r -i '1{/^#!/d}' snakemake/executors/jobscript.sh snakemake/executors/google_lifesciences_helper.py + sed -r -i 's@"python"@"/usr/bin/python3"@g' tests/test_linting.py + sed -r -i /sphinxcontrib-napoleon/d docs/requirements.txt + echo 'latex_engine = '\''xelatex'\''' + for editor in nano vim + cp -vp misc/nano/README.md README-nano.md + for editor in nano vim + cp -vp misc/vim/README.md README-vim.md + RPM_EC=0 ++ jobs -p + exit 0 'misc/nano/README.md' -> 'README-nano.md' 'misc/vim/README.md' -> 'README-vim.md' Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.2PZois + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement not satisfied: sphinx-argparse Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement not satisfied: sphinx_rtd_theme Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement not satisfied: myst-parser Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement not satisfied: appdirs Exiting dependency generation pass: all requirements files + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 311 B/s | 1.5 kB 00:05 Additional repo http_kojipkgs_fedoraproject_org 139 kB/s | 3.8 kB 00:00 fedora 56 kB/s | 4.3 kB 00:00 updates 16 kB/s | 5.3 kB 00:00 Package librsvg2-tools-2.57.1-1.fc40.s390x is already installed. Package texlive-xindy-11:svn65958-77.fc39.s390x is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc40.noarch is already installed. Package make-1:4.4.1-2.fc39.s390x is already installed. Package pyproject-rpm-macros-1.11.0-1.fc40.noarch is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-sphinx-latex-1:7.2.6-4.fc40.noarch is already installed. Package python3-boto3-1.34.12-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-docutils-0.20.1-1.fc40.noarch is already installed. Package python3-packaging-23.2-2.fc40.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.s390x is already installed. Package python3-pytest-7.4.3-1.fc40.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-sphinx-1:7.2.6-4.fc40.noarch is already installed. Package texlive-xetex-11:svn66203-77.fc39.s390x is already installed. Package vim-filesystem-2:9.0.2190-1.fc40.noarch is already installed. Dependencies resolved. =========================================================================================================================================== Package Arch Version Repository Size =========================================================================================================================================== Installing: python3-appdirs noarch 1.4.4-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23 k python3-myst-parser noarch 2.0.0-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k python3-pip noarch 23.3.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 2.9 M python3-sphinx-argparse noarch 0.4.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k python3-sphinx_rtd_theme noarch 2.0.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 74 k Installing dependencies: fontawesome4-fonts noarch 1:4.7.0-19.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 204 k google-roboto-slab-fonts noarch 1.100263-0.21.20150923git.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 239 k lato-fonts noarch 2.015-17.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 3.1 M libyaml s390x 0.2.5-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 62 k python3-markdown-it-py noarch 3.0.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 165 k python3-mdit-py-plugins noarch 0.4.0-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 101 k python3-mdurl noarch 0.1.2-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 26 k python3-pyyaml s390x 6.0.1-11.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 221 k python3-sphinxcontrib-jquery noarch 4.1-5.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 113 k Transaction Summary =========================================================================================================================================== Install 14 Packages Total download size: 7.4 M Installed size: 30 M Downloading Packages: (1/14): google-roboto-slab-fonts-1.100263-0.21. 47 kB/s | 239 kB 00:05 (2/14): libyaml-0.2.5-12.fc39.s390x.rpm 13 MB/s | 62 kB 00:00 (3/14): python3-appdirs-1.4.4-11.fc39.noarch.rp 6.7 MB/s | 23 kB 00:00 (4/14): fontawesome4-fonts-4.7.0-19.fc40.noarch 40 kB/s | 204 kB 00:05 (5/14): python3-markdown-it-py-3.0.0-2.fc39.noa 20 MB/s | 165 kB 00:00 (6/14): python3-mdit-py-plugins-0.4.0-2.fc39.no 12 MB/s | 101 kB 00:00 (7/14): python3-mdurl-0.1.2-4.fc39.noarch.rpm 7.8 MB/s | 26 kB 00:00 (8/14): python3-myst-parser-2.0.0-3.fc40.noarch 18 MB/s | 185 kB 00:00 (9/14): python3-pyyaml-6.0.1-11.fc39.s390x.rpm 21 MB/s | 221 kB 00:00 (10/14): python3-sphinx-argparse-0.4.0-4.fc39.n 9.0 MB/s | 39 kB 00:00 (11/14): python3-sphinx_rtd_theme-2.0.0-1.fc40. 11 MB/s | 74 kB 00:00 (12/14): lato-fonts-2.015-17.fc39.noarch.rpm 624 kB/s | 3.1 MB 00:05 (13/14): python3-sphinxcontrib-jquery-4.1-5.fc4 13 MB/s | 113 kB 00:00 (14/14): python3-pip-23.3.1-2.fc40.noarch.rpm 65 MB/s | 2.9 MB 00:00 -------------------------------------------------------------------------------- Total 1.5 MB/s | 7.4 MB 00:05 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-sphinxcontrib-jquery-4.1-5.fc40.noarch 1/14 Installing : python3-mdurl-0.1.2-4.fc39.noarch 2/14 Installing : python3-markdown-it-py-3.0.0-2.fc39.noarch 3/14 Installing : python3-mdit-py-plugins-0.4.0-2.fc39.noarch 4/14 Installing : libyaml-0.2.5-12.fc39.s390x 5/14 Installing : python3-pyyaml-6.0.1-11.fc39.s390x 6/14 Installing : lato-fonts-2.015-17.fc39.noarch 7/14 Installing : google-roboto-slab-fonts-1.100263-0.21.20150923git 8/14 Installing : fontawesome4-fonts-1:4.7.0-19.fc40.noarch 9/14 Installing : python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch 10/14 Installing : python3-myst-parser-2.0.0-3.fc40.noarch 11/14 Installing : python3-sphinx-argparse-0.4.0-4.fc39.noarch 12/14 Installing : python3-pip-23.3.1-2.fc40.noarch 13/14 Installing : python3-appdirs-1.4.4-11.fc39.noarch 14/14 Running scriptlet: python3-appdirs-1.4.4-11.fc39.noarch 14/14 Installed: fontawesome4-fonts-1:4.7.0-19.fc40.noarch google-roboto-slab-fonts-1.100263-0.21.20150923git.fc39.noarch lato-fonts-2.015-17.fc39.noarch libyaml-0.2.5-12.fc39.s390x python3-appdirs-1.4.4-11.fc39.noarch python3-markdown-it-py-3.0.0-2.fc39.noarch python3-mdit-py-plugins-0.4.0-2.fc39.noarch python3-mdurl-0.1.2-4.fc39.noarch python3-myst-parser-2.0.0-3.fc40.noarch python3-pip-23.3.1-2.fc40.noarch python3-pyyaml-6.0.1-11.fc39.s390x python3-sphinx-argparse-0.4.0-4.fc39.noarch python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch python3-sphinxcontrib-jquery-4.1-5.fc40.noarch Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.R8Invf + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info creating snakemake.egg-info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt writing manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement not satisfied: wheel Exiting dependency generation pass: get_requires_for_build_wheel + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv '*.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 65 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 155 kB/s | 3.8 kB 00:00 fedora 19 kB/s | 4.3 kB 00:00 updates 1.0 kB/s | 5.3 kB 00:05 Package librsvg2-tools-2.57.1-1.fc40.s390x is already installed. Package texlive-xindy-11:svn65958-77.fc39.s390x is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc40.noarch is already installed. Package make-1:4.4.1-2.fc39.s390x is already installed. Package pyproject-rpm-macros-1.11.0-1.fc40.noarch is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-sphinx-latex-1:7.2.6-4.fc40.noarch is already installed. Package python3-appdirs-1.4.4-11.fc39.noarch is already installed. Package python3-boto3-1.34.12-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-docutils-0.20.1-1.fc40.noarch is already installed. Package python3-myst-parser-2.0.0-3.fc40.noarch is already installed. Package python3-packaging-23.2-2.fc40.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.s390x is already installed. Package python3-pip-23.3.1-2.fc40.noarch is already installed. Package python3-pytest-7.4.3-1.fc40.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-setuptools-68.2.2-1.fc40.noarch is already installed. Package python3-sphinx-1:7.2.6-4.fc40.noarch is already installed. Package python3-sphinx-argparse-0.4.0-4.fc39.noarch is already installed. Package python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch is already installed. Package texlive-xetex-11:svn66203-77.fc39.s390x is already installed. Package vim-filesystem-2:9.0.2190-1.fc40.noarch is already installed. Dependencies resolved. ============================================================================================================= Package Arch Version Repository Size ============================================================================================================= Installing: python3-wheel noarch 1:0.41.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 148 k Transaction Summary ============================================================================================================= Install 1 Package Total download size: 148 k Installed size: 507 k Downloading Packages: python3-wheel-0.41.2-1.fc40.noarch.rpm 4.6 MB/s | 148 kB 00:00 -------------------------------------------------------------------------------- Total 4.4 MB/s | 148 kB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. Running transaction Preparing : 1/1 Installing : python3-wheel-1:0.41.2-1.fc40.noarch 1/1 Running scriptlet: python3-wheel-1:0.41.2-1.fc40.noarch 1/1 Installed: python3-wheel-1:0.41.2-1.fc40.noarch Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.aiqjCW + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: connection-pool >=0.0.3 Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: datrie Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: gitpython Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: humanfriendly Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: jsonschema Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: nbformat Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: psutil Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: pulp >=2.0 Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: reretry Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: smart-open >=3.0 Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: stopit Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: tabulate Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: throttler Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: toposort >=1.10 Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: wrapt Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: yte <2.0,>=1.5.1 Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-storage-blob ; extra == 'azure' Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-batch ; extra == 'azure' Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-core ; extra == 'azure' Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-identity ; extra == 'azure' Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: azure-mgmt-batch ; extra == 'azure' Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-api-python-client ; extra == 'google-cloud' Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-cloud-storage ; extra == 'google-cloud' Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: google-crc32c ; extra == 'google-cloud' Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: oauth2client ; extra == 'google-cloud' Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement not satisfied: slacker ; extra == 'messaging' Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 311 B/s | 1.5 kB 00:05 Additional repo http_kojipkgs_fedoraproject_org 771 B/s | 3.8 kB 00:05 fedora 50 kB/s | 4.3 kB 00:00 updates 66 kB/s | 5.3 kB 00:00 Package python3-jinja2-3.1.2-6.fc40.noarch is already installed. Package librsvg2-tools-2.57.1-1.fc40.s390x is already installed. Package texlive-xindy-11:svn65958-77.fc39.s390x is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc40.noarch is already installed. Package make-1:4.4.1-2.fc39.s390x is already installed. Package pyproject-rpm-macros-1.11.0-1.fc40.noarch is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-sphinx-latex-1:7.2.6-4.fc40.noarch is already installed. Package python3-appdirs-1.4.4-11.fc39.noarch is already installed. Package python3-boto3-1.34.12-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-docutils-0.20.1-1.fc40.noarch is already installed. Package python3-myst-parser-2.0.0-3.fc40.noarch is already installed. Package python3-packaging-23.2-2.fc40.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.s390x is already installed. Package python3-pip-23.3.1-2.fc40.noarch is already installed. Package python3-pygments-2.17.2-1.fc40.noarch is already installed. Package python3-pytest-7.4.3-1.fc40.noarch is already installed. Package python3-pyyaml-6.0.1-11.fc39.s390x is already installed. Package python3-requests-2.28.2-7.fc40.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-setuptools-68.2.2-1.fc40.noarch is already installed. Package python3-sphinx-1:7.2.6-4.fc40.noarch is already installed. Package python3-sphinx-argparse-0.4.0-4.fc39.noarch is already installed. Package python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch is already installed. Package python3-wheel-1:0.41.2-1.fc40.noarch is already installed. Package texlive-xetex-11:svn66203-77.fc39.s390x is already installed. Package vim-filesystem-2:9.0.2190-1.fc40.noarch is already installed. Dependencies resolved. ================================================================================================================================================= Package Arch Version Repository Size ================================================================================================================================================= Installing: python3-GitPython noarch 3.1.40-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 361 k python3-azure-batch noarch 14.0.0-1.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 207 k python3-azure-core noarch 2:1.28.0-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 260 k python3-azure-identity noarch 1:1.14.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 199 k python3-azure-mgmt-batch noarch 17.0.0-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 194 k python3-azure-storage-blob noarch 12.14.1-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 509 k python3-connection_pool noarch 0.0.3-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 17 k python3-datrie s390x 0.8.2-22.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 167 k python3-google-api-client noarch 2:2.112.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.7 M python3-google-cloud-storage noarch 2.14.0-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 189 k python3-google-crc32c s390x 1.1.2-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31 k python3-humanfriendly noarch 10.0-8.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 131 k python3-jsonschema noarch 4.19.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 186 k python3-nbformat noarch 5.9.1-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 120 k python3-oauth2client noarch 4.1.3-23.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 166 k python3-psutil s390x 5.9.5-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 258 k python3-pulp noarch 2.7.0-3.fc40 copr_base 195 k python3-reretry noarch 0.11.8-6.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 18 k python3-slacker noarch 0.14.0-12.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 35 k python3-smart_open noarch 6.4.0-2.fc40 copr_base 107 k python3-stopit noarch 1.1.2-8.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 25 k python3-tabulate noarch 0.9.0-4.fc39 copr_base 69 k python3-throttler noarch 1.2.2-7.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 22 k python3-toposort noarch 1.10-8.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20 k python3-wrapt s390x 1.16.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 67 k python3-yte noarch 1.5.4-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 31 k Installing dependencies: abseil-cpp s390x 20230802.1-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 699 k c-ares s390x 1.22.1-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 141 k git-core s390x 2.43.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 4.6 M google-crc32c s390x 1.1.2-7.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 20 k grpc-data noarch 1.48.4-30.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 23 k less s390x 643-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 185 k libcbor s390x 0.10.2-3.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33 k libedit s390x 3.1-48.20230828cvs.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 116 k libfido2 s390x 1.14.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 94 k openssh s390x 9.3p1-13.fc40.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 439 k openssh-clients s390x 9.3p1-13.fc40.1 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 757 k protobuf s390x 3.19.6-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.0 M python3-adal noarch 1.2.7-13.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 93 k python3-attrs noarch 23.1.0-4.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 110 k python3-azure-common noarch 1:1.1.28-6.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 33 k python3-azure-mgmt-core noarch 1:1.3.2-9.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 39 k python3-boto noarch 2.49.0-18.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.6 M python3-cachetools noarch 5.3.2-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k python3-certifi noarch 2023.05.07-2.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 14 k python3-cffi s390x 1.16.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 299 k python3-cryptography s390x 41.0.5-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 1.3 M python3-dpath noarch 2.1.4-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 37 k python3-fasteners noarch 0.19-2.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 44 k python3-fastjsonschema noarch 2.18.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 56 k python3-gitdb noarch 4.0.10-3.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 128 k python3-google-api-core noarch 1:2.11.1-5.fc39 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 177 k python3-google-auth noarch 1:2.26.0-1.fc40 http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 243 k python3-google-auth-httplib2 noarch 0.2.0-1.fc40 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http_kojipkgs_fedoraproject_org_repos_rawhide_latest_basearch 203 k Transaction Summary ================================================================================================================================================= Install 90 Packages Total download size: 27 M Installed size: 191 M Downloading Packages: (1/90): python3-tabulate-0.9.0-4.fc39.noarch.rp 1.8 MB/s | 69 kB 00:00 (2/90): python3-pulp-2.7.0-3.fc40.noarch.rpm 4.6 MB/s | 195 kB 00:00 (3/90): python3-smart_open-6.4.0-2.fc40.noarch. 1.8 MB/s | 107 kB 00:00 (4/90): abseil-cpp-20230802.1-2.fc40.s390x.rpm 29 MB/s | 699 kB 00:00 (5/90): c-ares-1.22.1-1.fc40.s390x.rpm 6.6 MB/s | 141 kB 00:00 (6/90): grpc-data-1.48.4-30.fc40.noarch.rpm 6.2 MB/s | 23 kB 00:00 (7/90): google-crc32c-1.1.2-7.fc39.s390x.rpm 4.1 MB/s | 20 kB 00:00 (8/90): libcbor-0.10.2-3.fc40.s390x.rpm 7.0 MB/s | 33 kB 00:00 (9/90): less-643-1.fc40.s390x.rpm 26 MB/s | 185 kB 00:00 (10/90): libfido2-1.14.0-1.fc40.s390x.rpm 22 MB/s | 94 kB 00:00 (11/90): libedit-3.1-48.20230828cvs.fc40.s390x. 17 MB/s | 116 kB 00:00 (12/90): openssh-clients-9.3p1-13.fc40.1.s390x. 99 MB/s | 757 kB 00:00 (13/90): openssh-9.3p1-13.fc40.1.s390x.rpm 47 MB/s | 439 kB 00:00 (14/90): git-core-2.43.0-1.fc40.s390x.rpm 115 MB/s | 4.6 MB 00:00 (15/90): python3-GitPython-3.1.40-1.fc40.noarch 34 MB/s | 361 kB 00:00 (16/90): protobuf-3.19.6-6.fc39.s390x.rpm 78 MB/s | 1.0 MB 00:00 (17/90): python3-adal-1.2.7-13.fc39.noarch.rpm 19 MB/s | 93 kB 00:00 (18/90): python3-attrs-23.1.0-4.fc39.noarch.rpm 23 MB/s | 110 kB 00:00 (19/90): python3-azure-batch-14.0.0-1.fc39.noar 38 MB/s | 207 kB 00:00 (20/90): python3-azure-common-1.1.28-6.fc39.noa 8.4 MB/s | 33 kB 00:00 (21/90): python3-azure-core-1.28.0-3.fc39.noarc 52 MB/s | 260 kB 00:00 (22/90): python3-azure-identity-1.14.0-1.fc40.n 35 MB/s | 199 kB 00:00 (23/90): python3-azure-mgmt-batch-17.0.0-5.fc39 32 MB/s | 194 kB 00:00 (24/90): python3-azure-mgmt-core-1.3.2-9.fc39.n 7.8 MB/s | 39 kB 00:00 (25/90): 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python3-smmap-5.0.0-6.fc39.noarch.rpm 12 MB/s | 55 kB 00:00 (82/90): python3-toposort-1.10-8.fc40.noarch.rp 6.0 MB/s | 20 kB 00:00 (83/90): python3-throttler-1.2.2-7.fc40.noarch. 4.5 MB/s | 22 kB 00:00 (84/90): python3-traitlets-5.11.2-1.fc40.noarch 32 MB/s | 191 kB 00:00 (85/90): python3-uritemplate-4.1.1-6.fc39.noarc 9.3 MB/s | 35 kB 00:00 (86/90): python3-typing-extensions-4.9.0-1.fc40 16 MB/s | 77 kB 00:00 (87/90): python3-zombie-imp-0.0.2-3.fc40.noarch 9.9 MB/s | 29 kB 00:00 (88/90): python3-wrapt-1.16.0-1.fc40.s390x.rpm 14 MB/s | 67 kB 00:00 (89/90): python3-yte-1.5.4-1.fc40.noarch.rpm 7.5 MB/s | 31 kB 00:00 (90/90): re2-20220601-3.fc39.s390x.rpm 36 MB/s | 203 kB 00:00 -------------------------------------------------------------------------------- Total 107 MB/s | 27 MB 00:00 Running transaction check Transaction check succeeded. Running transaction test Transaction test succeeded. 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Installing : python3-google-cloud-storage-2.14.0-2.fc40.noarch 68/90 Installing : python3-google-api-client-2:2.112.0-1.fc40.noarch 69/90 Installing : python3-GitPython-3.1.40-1.fc40.noarch 70/90 Installing : python3-azure-batch-14.0.0-1.fc39.noarch 71/90 Installing : python3-azure-mgmt-batch-17.0.0-5.fc39.noarch 72/90 Installing : python3-azure-storage-blob-12.14.1-4.fc39.noarch 73/90 Installing : python3-yte-1.5.4-1.fc40.noarch 74/90 Installing : python3-oauth2client-4.1.3-23.fc39.noarch 75/90 Installing : python3-nbformat-5.9.1-2.fc39.noarch 76/90 Installing : python3-azure-identity-1:1.14.0-1.fc40.noarch 77/90 Installing : python3-smart_open-6.4.0-2.fc40.noarch 78/90 Installing : python3-wrapt-1.16.0-1.fc40.s390x 79/90 Installing : python3-toposort-1.10-8.fc40.noarch 80/90 Installing : python3-throttler-1.2.2-7.fc40.noarch 81/90 Installing : python3-stopit-1.1.2-8.fc39.noarch 82/90 Installing : python3-slacker-0.14.0-12.fc39.noarch 83/90 Installing : python3-reretry-0.11.8-6.fc40.noarch 84/90 Installing : python3-psutil-5.9.5-2.fc40.s390x 85/90 Installing : python3-humanfriendly-10.0-8.fc39.noarch 86/90 Installing : python3-datrie-0.8.2-22.fc40.s390x 87/90 Installing : python3-connection_pool-0.0.3-9.fc39.noarch 88/90 Installing : python3-tabulate-0.9.0-4.fc39.noarch 89/90 Installing : python3-pulp-2.7.0-3.fc40.noarch 90/90 Running scriptlet: python3-pulp-2.7.0-3.fc40.noarch 90/90 Installed: abseil-cpp-20230802.1-2.fc40.s390x c-ares-1.22.1-1.fc40.s390x git-core-2.43.0-1.fc40.s390x google-crc32c-1.1.2-7.fc39.s390x grpc-data-1.48.4-30.fc40.noarch less-643-1.fc40.s390x libcbor-0.10.2-3.fc40.s390x libedit-3.1-48.20230828cvs.fc40.s390x libfido2-1.14.0-1.fc40.s390x openssh-9.3p1-13.fc40.1.s390x openssh-clients-9.3p1-13.fc40.1.s390x protobuf-3.19.6-6.fc39.s390x python3-GitPython-3.1.40-1.fc40.noarch python3-adal-1.2.7-13.fc39.noarch python3-attrs-23.1.0-4.fc39.noarch python3-azure-batch-14.0.0-1.fc39.noarch python3-azure-common-1:1.1.28-6.fc39.noarch python3-azure-core-2:1.28.0-3.fc39.noarch python3-azure-identity-1:1.14.0-1.fc40.noarch python3-azure-mgmt-batch-17.0.0-5.fc39.noarch python3-azure-mgmt-core-1:1.3.2-9.fc39.noarch python3-azure-storage-blob-12.14.1-4.fc39.noarch python3-boto-2.49.0-18.fc39.noarch python3-cachetools-5.3.2-1.fc40.noarch python3-certifi-2023.05.07-2.fc39.noarch python3-cffi-1.16.0-1.fc40.s390x python3-connection_pool-0.0.3-9.fc39.noarch python3-cryptography-41.0.5-2.fc40.s390x python3-datrie-0.8.2-22.fc40.s390x python3-dpath-2.1.4-3.fc39.noarch python3-fasteners-0.19-2.fc40.noarch python3-fastjsonschema-2.18.0-1.fc40.noarch python3-gitdb-4.0.10-3.fc39.noarch python3-google-api-client-2:2.112.0-1.fc40.noarch python3-google-api-core-1:2.11.1-5.fc39.noarch python3-google-auth-1:2.26.0-1.fc40.noarch python3-google-auth-httplib2-0.2.0-1.fc40.noarch python3-google-cloud-core-2.3.3-2.fc39.noarch python3-google-cloud-storage-2.14.0-2.fc40.noarch python3-google-crc32c-1.1.2-9.fc39.s390x python3-google-resumable-media-2.6.0-1.fc40.noarch python3-googleapis-common-protos-1.62.0-7.fc40.noarch python3-grpcio-1.48.4-30.fc40.s390x python3-grpcio-status-1.48.4-30.fc40.noarch python3-httplib2-0.21.0-4.fc39.noarch python3-humanfriendly-10.0-8.fc39.noarch python3-isodate-0.6.1-9.fc39.noarch python3-jsonschema-4.19.1-1.fc40.noarch python3-jsonschema-specifications-2023.11.2-1.fc40.noarch python3-jupyter-core-5.1.0-5.fc39.noarch python3-jwt-2.6.0-4.fc39.noarch python3-jwt+crypto-2.6.0-4.fc39.noarch python3-msal-1.26.0-2.fc40.noarch python3-msal-extensions-1.0.0-7.fc39.noarch python3-msrest-0.7.1-8.20221014git2d8fd04.fc39.noarch python3-msrestazure-0.6.4-18.fc39.noarch python3-nbformat-5.9.1-2.fc39.noarch python3-oauth2client-4.1.3-23.fc39.noarch python3-oauthlib-3.2.2-1.fc40.noarch python3-plac-1.4.2-3.fc40.noarch python3-platformdirs-3.11.0-1.fc40.noarch python3-ply-3.11-20.fc39.noarch python3-portalocker-2.8.2-2.fc40.noarch python3-protobuf-3.19.6-6.fc39.s390x python3-psutil-5.9.5-2.fc40.s390x python3-pulp-2.7.0-3.fc40.noarch python3-pyOpenSSL-23.2.0-1.fc40.noarch python3-pyasn1-0.5.1-1.fc40.noarch python3-pyasn1-modules-0.5.1-1.fc40.noarch python3-pycparser-2.20-12.fc40.noarch python3-pyparsing-3.1.1-1.fc40.noarch python3-referencing-0.31.1-1.fc40.noarch python3-requests-oauthlib-1.3.1-6.fc39.noarch python3-reretry-0.11.8-6.fc40.noarch python3-rpds-py-0.16.2-1.fc40.s390x python3-rsa-4.9-3.fc39.noarch python3-slacker-0.14.0-12.fc39.noarch python3-smart_open-6.4.0-2.fc40.noarch python3-smmap-5.0.0-6.fc39.noarch python3-stopit-1.1.2-8.fc39.noarch python3-tabulate-0.9.0-4.fc39.noarch python3-throttler-1.2.2-7.fc40.noarch python3-toposort-1.10-8.fc40.noarch python3-traitlets-5.11.2-1.fc40.noarch python3-typing-extensions-4.9.0-1.fc40.noarch python3-uritemplate-4.1.1-6.fc39.noarch python3-wrapt-1.16.0-1.fc40.s390x python3-yte-1.5.4-1.fc40.noarch python3-zombie-imp-0.0.2-3.fc40.noarch re2-1:20220601-3.fc39.s390x Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.Z4puor + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.1) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp >=2.0 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-storage-blob ; extra == 'azure' (installed: azure-storage-blob 12.14.1) Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-batch ; extra == 'azure' (installed: azure-batch 14.0.0) Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-core ; extra == 'azure' (installed: azure-core 1.28.0) Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-identity ; extra == 'azure' (installed: azure-identity 1.14.0) Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-mgmt-batch ; extra == 'azure' (installed: azure-mgmt-batch 17.0.0) Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-api-python-client ; extra == 'google-cloud' (installed: google-api-python-client 2.112.0) Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-cloud-storage ; extra == 'google-cloud' (installed: google-cloud-storage 2.14.0) Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-crc32c ; extra == 'google-cloud' (installed: google-crc32c 1.1.2) Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: oauth2client ; extra == 'google-cloud' (installed: oauth2client 4.1.3) Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slacker ; extra == 'messaging' (installed: slacker 0.14.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.buildreqs.nosrc.rpm INFO: Going to install missing dynamic buildrequires No matches found for the following disable plugin patterns: local, spacewalk, versionlock Copr repository 64 kB/s | 1.5 kB 00:00 Additional repo http_kojipkgs_fedoraproject_org 149 kB/s | 3.8 kB 00:00 fedora 77 kB/s | 4.3 kB 00:00 updates 56 kB/s | 5.3 kB 00:00 Package python3-jinja2-3.1.2-6.fc40.noarch is already installed. Package python3-yte-1.5.4-1.fc40.noarch is already installed. Package librsvg2-tools-2.57.1-1.fc40.s390x is already installed. Package texlive-xindy-11:svn65958-77.fc39.s390x is already installed. Package help2man-1.49.3-3.fc39.noarch is already installed. Package latexmk-4.82-1.fc40.noarch is already installed. Package make-1:4.4.1-2.fc39.s390x is already installed. Package pyproject-rpm-macros-1.11.0-1.fc40.noarch is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-devel-3.12.1-2.fc40.s390x is already installed. Package python3-sphinx-latex-1:7.2.6-4.fc40.noarch is already installed. Package python3-appdirs-1.4.4-11.fc39.noarch is already installed. Package python3-azure-batch-14.0.0-1.fc39.noarch is already installed. Package python3-azure-core-2:1.28.0-3.fc39.noarch is already installed. Package python3-azure-identity-1:1.14.0-1.fc40.noarch is already installed. Package python3-azure-mgmt-batch-17.0.0-5.fc39.noarch is already installed. Package python3-azure-storage-blob-12.14.1-4.fc39.noarch is already installed. Package python3-boto3-1.34.12-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-configargparse-1.7-1.fc40.noarch is already installed. Package python3-connection_pool-0.0.3-9.fc39.noarch is already installed. Package python3-datrie-0.8.2-22.fc40.s390x is already installed. Package python3-docutils-0.20.1-1.fc40.noarch is already installed. Package python3-GitPython-3.1.40-1.fc40.noarch is already installed. Package python3-google-api-client-2:2.112.0-1.fc40.noarch is already installed. Package python3-google-cloud-storage-2.14.0-2.fc40.noarch is already installed. Package python3-google-crc32c-1.1.2-9.fc39.s390x is already installed. Package python3-humanfriendly-10.0-8.fc39.noarch is already installed. Package python3-jsonschema-4.19.1-1.fc40.noarch is already installed. Package python3-myst-parser-2.0.0-3.fc40.noarch is already installed. Package python3-nbformat-5.9.1-2.fc39.noarch is already installed. Package python3-oauth2client-4.1.3-23.fc39.noarch is already installed. Package python3-packaging-23.2-2.fc40.noarch is already installed. Package python3-pandas-1.5.3-7.fc39~bootstrap.s390x is already installed. Package python3-pip-23.3.1-2.fc40.noarch is already installed. Package python3-psutil-5.9.5-2.fc40.s390x is already installed. Package python3-pulp-2.7.0-3.fc40.noarch is already installed. Package python3-pygments-2.17.2-1.fc40.noarch is already installed. Package python3-pytest-7.4.3-1.fc40.noarch is already installed. Package python3-pyyaml-6.0.1-11.fc39.s390x is already installed. Package python3-requests-2.28.2-7.fc40.noarch is already installed. Package python3-requests-mock-1.10.0-5.fc39.noarch is already installed. Package python3-reretry-0.11.8-6.fc40.noarch is already installed. Package python3-setuptools-68.2.2-1.fc40.noarch is already installed. Package python3-slacker-0.14.0-12.fc39.noarch is already installed. Package python3-smart_open-6.4.0-2.fc40.noarch is already installed. Package python3-sphinx-1:7.2.6-4.fc40.noarch is already installed. Package python3-sphinx-argparse-0.4.0-4.fc39.noarch is already installed. Package python3-sphinx_rtd_theme-2.0.0-1.fc40.noarch is already installed. Package python3-stopit-1.1.2-8.fc39.noarch is already installed. Package python3-tabulate-0.9.0-4.fc39.noarch is already installed. Package python3-throttler-1.2.2-7.fc40.noarch is already installed. Package python3-toposort-1.10-8.fc40.noarch is already installed. Package python3-wheel-1:0.41.2-1.fc40.noarch is already installed. Package python3-wrapt-1.16.0-1.fc40.s390x is already installed. Package texlive-xetex-11:svn66203-77.fc39.s390x is already installed. Package vim-filesystem-2:9.0.2190-1.fc40.noarch is already installed. Dependencies resolved. Nothing to do. Complete! Building target platforms: s390x Building for target s390x setting SOURCE_DATE_EPOCH=1704412800 Executing(%generate_buildrequires): /bin/sh -e /var/tmp/rpm-tmp.iCz9rG + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + echo pyproject-rpm-macros + echo python3-devel + echo 'python3dist(pip) >= 19' + echo 'python3dist(packaging)' + '[' -f pyproject.toml ']' + echo '(python3dist(tomli) if python3-devel < 3.11)' + rm -rfv '*.dist-info/' + '[' -f /usr/bin/python3 ']' + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + echo -n + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + RPM_TOXENV=py312 + HOSTNAME=rpmbuild + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_buildrequires.py --generate-extras --python3_pkgversion 3 --wheeldir /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires -x reports,messaging,google-cloud,azure docs/requirements.txt Handling sphinx >=3 from requirements file docs/requirements.txt Requirement satisfied: sphinx >=3 (installed: sphinx 7.2.6) Handling sphinx-argparse from requirements file docs/requirements.txt Requirement satisfied: sphinx-argparse (installed: sphinx-argparse 0.4.0) Handling sphinx_rtd_theme from requirements file docs/requirements.txt Requirement satisfied: sphinx_rtd_theme (installed: sphinx_rtd_theme 2.0.0) Handling docutils from requirements file docs/requirements.txt Requirement satisfied: docutils (installed: docutils 0.20.1) Handling myst-parser from requirements file docs/requirements.txt Requirement satisfied: myst-parser (installed: myst-parser 2.0.0) Handling configargparse from requirements file docs/requirements.txt Requirement satisfied: configargparse (installed: configargparse 1.7) Handling appdirs from requirements file docs/requirements.txt Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling setuptools>=42 from build-system.requires Requirement satisfied: setuptools>=42 (installed: setuptools 68.2.2) Handling tomli; python_version < "3.11" from build-system.requires Ignoring alien requirement: tomli; python_version < "3.11" running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Handling wheel from get_requires_for_build_wheel Requirement satisfied: wheel (installed: wheel 0.41.2) running dist_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/snakemake-7.32.4.dist-info' Handling appdirs from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: appdirs (installed: appdirs 1.4.4) Handling configargparse from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: configargparse (installed: configargparse 1.7) Handling connection-pool >=0.0.3 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: connection-pool >=0.0.3 (installed: connection-pool 0.0.3) Handling datrie from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: datrie (installed: datrie 0.8.2) Handling docutils from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: docutils (installed: docutils 0.20.1) Handling gitpython from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: gitpython (installed: gitpython 3.1.40) Handling humanfriendly from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: humanfriendly (installed: humanfriendly 10.0) Handling jinja2 <4.0,>=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jinja2 <4.0,>=3.0 (installed: jinja2 3.1.2) Handling jsonschema from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: jsonschema (installed: jsonschema 4.19.1) Handling nbformat from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: nbformat (installed: nbformat 5.9.1) Handling packaging from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: packaging (installed: packaging 23.2) Handling psutil from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: psutil (installed: psutil 5.9.5) Handling pulp >=2.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pulp >=2.0 (installed: pulp 2.7.0) Handling pyyaml from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pyyaml (installed: pyyaml 6.0.1) Handling requests from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: requests (installed: requests 2.28.2) Handling reretry from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: reretry (installed: reretry 0.11.8) Handling smart-open >=3.0 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: smart-open >=3.0 (installed: smart-open 6.4.0) Handling stopit from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: stopit (installed: stopit 1.1.2) Handling tabulate from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: tabulate (installed: tabulate 0.9.0) Handling throttler from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: throttler (installed: throttler 1.2.2) Handling toposort >=1.10 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: toposort >=1.10 (installed: toposort 1.10) Handling wrapt from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: wrapt (installed: wrapt 1.16.0) Handling yte <2.0,>=1.5.1 from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: yte <2.0,>=1.5.1 (installed: yte 1.5.4) Handling azure-storage-blob ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-storage-blob ; extra == 'azure' (installed: azure-storage-blob 12.14.1) Handling azure-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-batch ; extra == 'azure' (installed: azure-batch 14.0.0) Handling azure-core ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-core ; extra == 'azure' (installed: azure-core 1.28.0) Handling azure-identity ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-identity ; extra == 'azure' (installed: azure-identity 1.14.0) Handling azure-mgmt-batch ; extra == 'azure' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: azure-mgmt-batch ; extra == 'azure' (installed: azure-mgmt-batch 17.0.0) Handling google-api-python-client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-api-python-client ; extra == 'google-cloud' (installed: google-api-python-client 2.112.0) Handling google-cloud-storage ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-cloud-storage ; extra == 'google-cloud' (installed: google-cloud-storage 2.14.0) Handling google-crc32c ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: google-crc32c ; extra == 'google-cloud' (installed: google-crc32c 1.1.2) Handling oauth2client ; extra == 'google-cloud' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: oauth2client ; extra == 'google-cloud' (installed: oauth2client 4.1.3) Handling slacker ; extra == 'messaging' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: slacker ; extra == 'messaging' (installed: slacker 0.14.0) Handling eido ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: eido ; extra == 'pep' Handling peppy ; extra == 'pep' from hook generated metadata: Requires-Dist (snakemake) Ignoring alien requirement: peppy ; extra == 'pep' Handling pygments ; extra == 'reports' from hook generated metadata: Requires-Dist (snakemake) Requirement satisfied: pygments ; extra == 'reports' (installed: pygments 2.17.2) + cat /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-buildrequires + rm -rfv snakemake-7.32.4.dist-info/ removed 'snakemake-7.32.4.dist-info/AUTHORS.rst' removed 'snakemake-7.32.4.dist-info/LICENSE.md' removed 'snakemake-7.32.4.dist-info/METADATA' removed 'snakemake-7.32.4.dist-info/entry_points.txt' removed 'snakemake-7.32.4.dist-info/top_level.txt' removed directory 'snakemake-7.32.4.dist-info/' + RPM_EC=0 ++ jobs -p + exit 0 Executing(%build): /bin/sh -e /var/tmp/rpm-tmp.v1MRJH + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 + mkdir -p /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + /usr/bin/python3 -Bs /usr/lib/rpm/redhat/pyproject_wheel.py /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir Processing /builddir/build/BUILD/snakemake-7.32.4 Preparing metadata (pyproject.toml): started Running command Preparing metadata (pyproject.toml) running dist_info creating /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info writing /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/PKG-INFO writing dependency_links to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/dependency_links.txt writing entry points to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/entry_points.txt writing requirements to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/requires.txt writing top-level names to /builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/top_level.txt writing manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/SOURCES.txt' reading manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake.egg-info/SOURCES.txt' creating '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-modern-metadata-_3d4ryd4/snakemake-7.32.4.dist-info' Preparing metadata (pyproject.toml): finished with status 'done' Building wheels for collected packages: snakemake Building wheel for snakemake (pyproject.toml): started Running command Building wheel for snakemake (pyproject.toml) running bdist_wheel running build running build_py creating build creating build/lib creating build/lib/snakemake copying snakemake/wrapper.py -> build/lib/snakemake copying snakemake/workflow.py -> build/lib/snakemake copying snakemake/utils.py -> build/lib/snakemake copying snakemake/target_jobs.py -> build/lib/snakemake copying snakemake/stats.py -> build/lib/snakemake copying snakemake/sourcecache.py -> build/lib/snakemake copying snakemake/shell.py -> build/lib/snakemake copying snakemake/script.py -> build/lib/snakemake copying snakemake/scheduler.py -> build/lib/snakemake copying snakemake/rules.py -> build/lib/snakemake copying snakemake/ruleinfo.py -> build/lib/snakemake copying snakemake/resources.py -> build/lib/snakemake copying snakemake/profiles.py -> build/lib/snakemake copying snakemake/persistence.py -> build/lib/snakemake copying snakemake/path_modifier.py -> build/lib/snakemake copying snakemake/parser.py -> build/lib/snakemake copying snakemake/output_index.py -> build/lib/snakemake copying snakemake/notebook.py -> build/lib/snakemake copying snakemake/modules.py -> build/lib/snakemake copying snakemake/logging.py -> build/lib/snakemake copying snakemake/jobs.py -> build/lib/snakemake copying snakemake/io.py -> build/lib/snakemake copying snakemake/interfaces.py -> build/lib/snakemake copying snakemake/gui.py -> build/lib/snakemake copying snakemake/exceptions.py -> build/lib/snakemake copying snakemake/decorators.py -> build/lib/snakemake copying snakemake/dag.py -> build/lib/snakemake copying snakemake/cwl.py -> build/lib/snakemake copying snakemake/checkpoints.py -> build/lib/snakemake copying snakemake/benchmark.py -> build/lib/snakemake copying snakemake/_version.py -> build/lib/snakemake copying snakemake/__main__.py -> build/lib/snakemake copying snakemake/__init__.py -> build/lib/snakemake creating build/lib/snakemake/unit_tests copying snakemake/unit_tests/__init__.py -> build/lib/snakemake/unit_tests creating build/lib/snakemake/template_rendering copying snakemake/template_rendering/yte.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/jinja2.py -> build/lib/snakemake/template_rendering copying snakemake/template_rendering/__init__.py -> build/lib/snakemake/template_rendering creating build/lib/snakemake/report copying snakemake/report/rulegraph_spec.py -> build/lib/snakemake/report copying snakemake/report/__init__.py -> build/lib/snakemake/report creating build/lib/snakemake/remote copying snakemake/remote/zenodo.py -> build/lib/snakemake/remote copying snakemake/remote/webdav.py -> build/lib/snakemake/remote copying snakemake/remote/iRODS.py -> build/lib/snakemake/remote copying snakemake/remote/gridftp.py -> build/lib/snakemake/remote copying snakemake/remote/gfal.py -> build/lib/snakemake/remote copying snakemake/remote/dropbox.py -> build/lib/snakemake/remote copying snakemake/remote/__init__.py -> build/lib/snakemake/remote copying snakemake/remote/XRootD.py -> build/lib/snakemake/remote copying snakemake/remote/SFTP.py -> build/lib/snakemake/remote copying snakemake/remote/S3Mocked.py -> build/lib/snakemake/remote copying snakemake/remote/S3.py -> build/lib/snakemake/remote copying snakemake/remote/NCBI.py -> build/lib/snakemake/remote copying snakemake/remote/HTTP.py -> build/lib/snakemake/remote copying snakemake/remote/GS.py -> build/lib/snakemake/remote copying snakemake/remote/FTP.py -> build/lib/snakemake/remote copying snakemake/remote/EGA.py -> build/lib/snakemake/remote copying snakemake/remote/AzBlob.py -> build/lib/snakemake/remote creating build/lib/snakemake/linting copying snakemake/linting/snakefiles.py -> build/lib/snakemake/linting copying snakemake/linting/rules.py -> build/lib/snakemake/linting copying snakemake/linting/links.py -> build/lib/snakemake/linting copying snakemake/linting/__init__.py -> build/lib/snakemake/linting creating build/lib/snakemake/executors copying snakemake/executors/google_lifesciences_helper.py -> build/lib/snakemake/executors copying snakemake/executors/google_lifesciences.py -> build/lib/snakemake/executors copying snakemake/executors/ga4gh_tes.py -> build/lib/snakemake/executors copying snakemake/executors/flux.py -> build/lib/snakemake/executors copying snakemake/executors/common.py -> build/lib/snakemake/executors copying snakemake/executors/azure_batch.py -> build/lib/snakemake/executors copying snakemake/executors/__init__.py -> build/lib/snakemake/executors creating build/lib/snakemake/deployment copying snakemake/deployment/singularity.py -> build/lib/snakemake/deployment copying snakemake/deployment/env_modules.py -> build/lib/snakemake/deployment copying snakemake/deployment/containerize.py -> build/lib/snakemake/deployment copying snakemake/deployment/conda.py -> build/lib/snakemake/deployment copying snakemake/deployment/__init__.py -> build/lib/snakemake/deployment creating build/lib/snakemake/common copying snakemake/common/tbdstring.py -> build/lib/snakemake/common copying snakemake/common/__init__.py -> build/lib/snakemake/common creating build/lib/snakemake/caching copying snakemake/caching/remote.py -> build/lib/snakemake/caching copying snakemake/caching/local.py -> build/lib/snakemake/caching copying snakemake/caching/hash.py -> build/lib/snakemake/caching copying snakemake/caching/__init__.py -> build/lib/snakemake/caching creating build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/__init__.py -> build/lib/snakemake/unit_tests/templates creating build/lib/snakemake/report/template copying snakemake/report/template/__init__.py -> build/lib/snakemake/report/template creating build/lib/snakemake/report/data copying snakemake/report/data/timeline.py -> build/lib/snakemake/report/data copying snakemake/report/data/runtimes.py -> build/lib/snakemake/report/data copying snakemake/report/data/rules.py -> build/lib/snakemake/report/data copying snakemake/report/data/rulegraph.py -> build/lib/snakemake/report/data copying snakemake/report/data/results.py -> build/lib/snakemake/report/data copying snakemake/report/data/packages.py -> build/lib/snakemake/report/data copying snakemake/report/data/common.py -> build/lib/snakemake/report/data copying snakemake/report/data/categories.py -> build/lib/snakemake/report/data copying snakemake/report/data/__init__.py -> build/lib/snakemake/report/data creating build/lib/snakemake/report/template/components copying snakemake/report/template/components/__init__.py -> build/lib/snakemake/report/template/components creating build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_submit.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/slurm_jobstep.py -> build/lib/snakemake/executors/slurm copying snakemake/executors/slurm/__init__.py -> build/lib/snakemake/executors/slurm copying snakemake/report.css -> build/lib/snakemake copying snakemake/gui.html -> build/lib/snakemake copying snakemake/executors/jobscript.sh -> build/lib/snakemake/executors copying snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/unit_tests/templates/common.py.jinja2 -> build/lib/snakemake/unit_tests/templates copying snakemake/report/template/style.css -> build/lib/snakemake/report/template copying snakemake/report/template/index.html.jinja2 -> build/lib/snakemake/report/template copying snakemake/report/template/logo.svg -> build/lib/snakemake/report/template copying snakemake/report/template/components/subcategory.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/stats.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/search_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/rule_graph.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_view_button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/result_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/report_info.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/navbar.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/menu.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_item.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/list_heading.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/icon.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/content.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/common.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/category.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/button.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/breadcrumbs.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/app.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_results.js -> build/lib/snakemake/report/template/components copying snakemake/report/template/components/abstract_menu.js -> build/lib/snakemake/report/template/components UPDATING build/lib/snakemake/_version.py set build/lib/snakemake/_version.py to '7.32.4' installing to build/bdist.linux-s390x/wheel running install running install_lib creating build/bdist.linux-s390x creating build/bdist.linux-s390x/wheel creating build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/_version.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/gui.html -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/report.css -> build/bdist.linux-s390x/wheel/snakemake creating build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/hash.py -> build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/local.py -> build/bdist.linux-s390x/wheel/snakemake/caching copying build/lib/snakemake/caching/remote.py -> build/bdist.linux-s390x/wheel/snakemake/caching creating build/bdist.linux-s390x/wheel/snakemake/common copying build/lib/snakemake/common/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/common copying build/lib/snakemake/common/tbdstring.py -> build/bdist.linux-s390x/wheel/snakemake/common creating build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/conda.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/containerize.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/env_modules.py -> build/bdist.linux-s390x/wheel/snakemake/deployment copying build/lib/snakemake/deployment/singularity.py -> build/bdist.linux-s390x/wheel/snakemake/deployment creating build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/jobscript.sh -> build/bdist.linux-s390x/wheel/snakemake/executors creating build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_jobstep.py -> build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/slurm/slurm_submit.py -> build/bdist.linux-s390x/wheel/snakemake/executors/slurm copying build/lib/snakemake/executors/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/azure_batch.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/common.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/flux.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/ga4gh_tes.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences.py -> build/bdist.linux-s390x/wheel/snakemake/executors copying build/lib/snakemake/executors/google_lifesciences_helper.py -> build/bdist.linux-s390x/wheel/snakemake/executors creating build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/links.py -> build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/rules.py -> build/bdist.linux-s390x/wheel/snakemake/linting copying build/lib/snakemake/linting/snakefiles.py -> build/bdist.linux-s390x/wheel/snakemake/linting creating build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/AzBlob.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/EGA.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/FTP.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/GS.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/HTTP.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/NCBI.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/S3.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/S3Mocked.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/SFTP.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/XRootD.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/dropbox.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/gfal.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/gridftp.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/iRODS.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/webdav.py -> build/bdist.linux-s390x/wheel/snakemake/remote copying build/lib/snakemake/remote/zenodo.py -> build/bdist.linux-s390x/wheel/snakemake/remote creating build/bdist.linux-s390x/wheel/snakemake/report creating build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/categories.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/common.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/packages.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/results.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rulegraph.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/rules.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/runtimes.py -> build/bdist.linux-s390x/wheel/snakemake/report/data copying build/lib/snakemake/report/data/timeline.py -> build/bdist.linux-s390x/wheel/snakemake/report/data creating build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/template/logo.svg -> build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/template/index.html.jinja2 -> build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/template/style.css -> build/bdist.linux-s390x/wheel/snakemake/report/template creating build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_menu.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/abstract_results.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/app.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/breadcrumbs.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/button.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/category.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/common.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/content.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/icon.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_heading.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/list_item.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/menu.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/navbar.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/report_info.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_info.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/result_view_button.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_graph.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/rule_info.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/search_results.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/stats.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/subcategory.js -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/components/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report/template/components copying build/lib/snakemake/report/template/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report/template copying build/lib/snakemake/report/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/report copying build/lib/snakemake/report/rulegraph_spec.py -> build/bdist.linux-s390x/wheel/snakemake/report creating build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/jinja2.py -> build/bdist.linux-s390x/wheel/snakemake/template_rendering copying build/lib/snakemake/template_rendering/yte.py -> build/bdist.linux-s390x/wheel/snakemake/template_rendering creating build/bdist.linux-s390x/wheel/snakemake/unit_tests creating build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/common.py.jinja2 -> build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/ruletest.py.jinja2 -> build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/templates/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/unit_tests/templates copying build/lib/snakemake/unit_tests/__init__.py -> build/bdist.linux-s390x/wheel/snakemake/unit_tests copying build/lib/snakemake/__init__.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/__main__.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/benchmark.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/checkpoints.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/cwl.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/dag.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/decorators.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/exceptions.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/gui.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/interfaces.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/io.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/jobs.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/logging.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/modules.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/notebook.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/output_index.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/parser.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/path_modifier.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/persistence.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/profiles.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/resources.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/ruleinfo.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/rules.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/scheduler.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/script.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/shell.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/sourcecache.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/stats.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/target_jobs.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/utils.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/workflow.py -> build/bdist.linux-s390x/wheel/snakemake copying build/lib/snakemake/wrapper.py -> build/bdist.linux-s390x/wheel/snakemake running install_egg_info running egg_info writing snakemake.egg-info/PKG-INFO writing dependency_links to snakemake.egg-info/dependency_links.txt writing entry points to snakemake.egg-info/entry_points.txt writing requirements to snakemake.egg-info/requires.txt writing top-level names to snakemake.egg-info/top_level.txt reading manifest file 'snakemake.egg-info/SOURCES.txt' reading manifest template 'MANIFEST.in' adding license file 'LICENSE.md' adding license file 'AUTHORS.rst' writing manifest file 'snakemake.egg-info/SOURCES.txt' Copying snakemake.egg-info to build/bdist.linux-s390x/wheel/snakemake-7.32.4-py3.12.egg-info running install_scripts creating build/bdist.linux-s390x/wheel/snakemake-7.32.4.dist-info/WHEEL creating '/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir/pip-wheel-muvd2hka/.tmp-wy4phbxs/snakemake-7.32.4-py3-none-any.whl' and adding 'build/bdist.linux-s390x/wheel' to it adding 'snakemake/__init__.py' adding 'snakemake/__main__.py' adding 'snakemake/_version.py' adding 'snakemake/benchmark.py' adding 'snakemake/checkpoints.py' adding 'snakemake/cwl.py' adding 'snakemake/dag.py' adding 'snakemake/decorators.py' adding 'snakemake/exceptions.py' adding 'snakemake/gui.html' adding 'snakemake/gui.py' adding 'snakemake/interfaces.py' adding 'snakemake/io.py' adding 'snakemake/jobs.py' adding 'snakemake/logging.py' adding 'snakemake/modules.py' adding 'snakemake/notebook.py' adding 'snakemake/output_index.py' adding 'snakemake/parser.py' adding 'snakemake/path_modifier.py' adding 'snakemake/persistence.py' adding 'snakemake/profiles.py' adding 'snakemake/report.css' adding 'snakemake/resources.py' adding 'snakemake/ruleinfo.py' adding 'snakemake/rules.py' adding 'snakemake/scheduler.py' adding 'snakemake/script.py' adding 'snakemake/shell.py' adding 'snakemake/sourcecache.py' adding 'snakemake/stats.py' adding 'snakemake/target_jobs.py' adding 'snakemake/utils.py' adding 'snakemake/workflow.py' adding 'snakemake/wrapper.py' adding 'snakemake/caching/__init__.py' adding 'snakemake/caching/hash.py' adding 'snakemake/caching/local.py' adding 'snakemake/caching/remote.py' adding 'snakemake/common/__init__.py' adding 'snakemake/common/tbdstring.py' adding 'snakemake/deployment/__init__.py' adding 'snakemake/deployment/conda.py' adding 'snakemake/deployment/containerize.py' adding 'snakemake/deployment/env_modules.py' adding 'snakemake/deployment/singularity.py' adding 'snakemake/executors/__init__.py' adding 'snakemake/executors/azure_batch.py' adding 'snakemake/executors/common.py' adding 'snakemake/executors/flux.py' adding 'snakemake/executors/ga4gh_tes.py' adding 'snakemake/executors/google_lifesciences.py' adding 'snakemake/executors/google_lifesciences_helper.py' adding 'snakemake/executors/jobscript.sh' adding 'snakemake/executors/slurm/__init__.py' adding 'snakemake/executors/slurm/slurm_jobstep.py' adding 'snakemake/executors/slurm/slurm_submit.py' adding 'snakemake/linting/__init__.py' adding 'snakemake/linting/links.py' adding 'snakemake/linting/rules.py' adding 'snakemake/linting/snakefiles.py' adding 'snakemake/remote/AzBlob.py' adding 'snakemake/remote/EGA.py' adding 'snakemake/remote/FTP.py' adding 'snakemake/remote/GS.py' adding 'snakemake/remote/HTTP.py' adding 'snakemake/remote/NCBI.py' adding 'snakemake/remote/S3.py' adding 'snakemake/remote/S3Mocked.py' adding 'snakemake/remote/SFTP.py' adding 'snakemake/remote/XRootD.py' adding 'snakemake/remote/__init__.py' adding 'snakemake/remote/dropbox.py' adding 'snakemake/remote/gfal.py' adding 'snakemake/remote/gridftp.py' adding 'snakemake/remote/iRODS.py' adding 'snakemake/remote/webdav.py' adding 'snakemake/remote/zenodo.py' adding 'snakemake/report/__init__.py' adding 'snakemake/report/rulegraph_spec.py' adding 'snakemake/report/data/__init__.py' adding 'snakemake/report/data/categories.py' adding 'snakemake/report/data/common.py' adding 'snakemake/report/data/packages.py' adding 'snakemake/report/data/results.py' adding 'snakemake/report/data/rulegraph.py' adding 'snakemake/report/data/rules.py' adding 'snakemake/report/data/runtimes.py' adding 'snakemake/report/data/timeline.py' adding 'snakemake/report/template/__init__.py' adding 'snakemake/report/template/index.html.jinja2' adding 'snakemake/report/template/logo.svg' adding 'snakemake/report/template/style.css' adding 'snakemake/report/template/components/__init__.py' adding 'snakemake/report/template/components/abstract_menu.js' adding 'snakemake/report/template/components/abstract_results.js' adding 'snakemake/report/template/components/app.js' adding 'snakemake/report/template/components/breadcrumbs.js' adding 'snakemake/report/template/components/button.js' adding 'snakemake/report/template/components/category.js' adding 'snakemake/report/template/components/common.js' adding 'snakemake/report/template/components/content.js' adding 'snakemake/report/template/components/icon.js' adding 'snakemake/report/template/components/list_heading.js' adding 'snakemake/report/template/components/list_item.js' adding 'snakemake/report/template/components/menu.js' adding 'snakemake/report/template/components/navbar.js' adding 'snakemake/report/template/components/report_info.js' adding 'snakemake/report/template/components/result_info.js' adding 'snakemake/report/template/components/result_view_button.js' adding 'snakemake/report/template/components/rule_graph.js' adding 'snakemake/report/template/components/rule_info.js' adding 'snakemake/report/template/components/search_results.js' adding 'snakemake/report/template/components/stats.js' adding 'snakemake/report/template/components/subcategory.js' adding 'snakemake/template_rendering/__init__.py' adding 'snakemake/template_rendering/jinja2.py' adding 'snakemake/template_rendering/yte.py' adding 'snakemake/unit_tests/__init__.py' adding 'snakemake/unit_tests/templates/__init__.py' adding 'snakemake/unit_tests/templates/common.py.jinja2' adding 'snakemake/unit_tests/templates/ruletest.py.jinja2' adding 'snakemake-7.32.4.dist-info/AUTHORS.rst' adding 'snakemake-7.32.4.dist-info/LICENSE.md' adding 'snakemake-7.32.4.dist-info/METADATA' adding 'snakemake-7.32.4.dist-info/WHEEL' adding 'snakemake-7.32.4.dist-info/entry_points.txt' adding 'snakemake-7.32.4.dist-info/top_level.txt' adding 'snakemake-7.32.4.dist-info/RECORD' removing build/bdist.linux-s390x/wheel Building wheel for snakemake (pyproject.toml): finished with status 'done' Created wheel for snakemake: filename=snakemake-7.32.4-py3-none-any.whl size=380736 sha256=c9b3e662db07312d0c2217a703c704304f37c2b78544444d87eddb165fc605a7 Stored in directory: /builddir/.cache/pip/wheels/53/8b/cb/3dce719624720fd97280e70d5666cec6215f6d7c6704f015ae Successfully built snakemake + find docs -type f -name '*.svg' + read -r fn ++ dirname docs/executor_tutorial/workflow/quals.svg ++ basename docs/executor_tutorial/workflow/quals.svg .svg + rsvg-convert --format=pdf --output=docs/executor_tutorial/workflow/quals.pdf docs/executor_tutorial/workflow/quals.svg + read -r fn + find docs/executor_tutorial -type f -exec gawk '/\.svg/ { print FILENAME; nextfile }' '{}' + + xargs -r -t sed -r -i 's/(image::.*)\.svg/\1\.pdf/' sed -r -i 's/(image::.*)\.svg/\1\.pdf/' docs/executor_tutorial/google_lifesciences.rst docs/executor_tutorial/azure_batch.rst + PYTHONPATH=/builddir/build/BUILD/snakemake-7.32.4 + /usr/bin/make -O -j2 V=1 VERBOSE=1 -C docs latexpdf 'SPHINXOPTS=-j${RPM_BUILD_NCPUS}' make: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs' sphinx-build -b latex -d _build/doctrees -j2 . _build/latex Running Sphinx v7.2.6 making output directory... done myst v2.0.0: MdParserConfig(commonmark_only=False, gfm_only=False, enable_extensions=set(), disable_syntax=[], all_links_external=False, url_schemes=('http', 'https', 'mailto', 'ftp'), ref_domains=None, fence_as_directive=set(), number_code_blocks=[], title_to_header=False, heading_anchors=0, heading_slug_func=None, html_meta={}, footnote_transition=True, words_per_minute=200, substitutions={}, linkify_fuzzy_links=True, dmath_allow_labels=True, dmath_allow_space=True, dmath_allow_digits=True, dmath_double_inline=False, update_mathjax=True, mathjax_classes='tex2jax_process|mathjax_process|math|output_area', enable_checkboxes=False, suppress_warnings=[], highlight_code_blocks=True) building [mo]: targets for 0 po files that are out of date writing output... building [latex]: all documents updating environment: [new config] 38 added, 0 changed, 0 removed reading sources... [100%] snakefiles/remote_files .. tutorial/tutorial looking for now-outdated files... none found pickling environment... done checking consistency... done copying TeX support files... copying TeX support files... done processing Snakemake.tex... index getting_started/installation tutorial/tutorial tutorial/setup tutorial/basics tutorial/advanced tutorial/additional_features tutorial/short executor_tutorial/tutorial executor_tutorial/azure_batch executor_tutorial/azure_aks executor_tutorial/google_lifesciences executor_tutorial/flux snakefiles/best_practices executing/cli executing/cluster executing/cloud executing/grouping executing/caching executing/interoperability executing/monitoring snakefiles/writing_snakefiles snakefiles/rules snakefiles/configuration snakefiles/modularization snakefiles/remote_files snakefiles/utils snakefiles/deployment snakefiles/reporting snakefiles/testing snakefiles/foreign_wms project_info/citations project_info/more_resources project_info/faq project_info/contributing project_info/authors project_info/history project_info/license resolving references... done writing... done copying images... [100%] project_info/img/idea.png build succeeded, 497 warnings. The LaTeX files are in _build/latex. Run 'make' in that directory to run these through (pdf)latex (use `make latexpdf' here to do that automatically). Running LaTeX files through pdflatex... /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst:174: CRITICAL: Title level inconsistent: Use templating in profiles ~~~~~~~~~~~~~~~~~~~~~~~~~~ /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst:111: WARNING: duplicate label profiles, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:72: WARNING: duplicate label kubernetes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:233: WARNING: duplicate label machine types, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:406: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst:490: WARNING: duplicate label execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cloud.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:13: WARNING: Title overline too short. -------------- Executing on SLURM clusters -------------- /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:5: WARNING: duplicate label cluster, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executing/monitoring.rst:5: WARNING: duplicate label monitoring, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/monitoring.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst:184: ERROR: Unexpected indentation. /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:47: WARNING: Title underline too short. Create an Azure Storage Account and upload example data ::::::::::::::::::::::::::::::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:47: WARNING: Title underline too short. Create an Azure Storage Account and upload example data ::::::::::::::::::::::::::::::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:119: WARNING: Title underline too short. Azure Blob Storage Warning: ::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:119: WARNING: Title underline too short. Azure Blob Storage Warning: ::::::::::::::::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:367: WARNING: Title underline too short. Defining a Start Task ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:367: WARNING: Title underline too short. Defining a Start Task ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:386: WARNING: Title underline too short. Autoscaling and Task Distribution ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:386: WARNING: Title underline too short. Autoscaling and Task Distribution ::::: /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:28: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:163: WARNING: duplicate label running the workflow, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_aks.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/google_lifesciences.rst:13: WARNING: duplicate label setup, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/remote_files.rst:653: WARNING: Inline literal start-string without end-string. /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/reporting.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/reporting.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/reporting.rst:5: WARNING: duplicate label reports, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cli.rst /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:5: WARNING: Duplicate explicit target name: "humanfriendly package". /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1256: WARNING: malformed hyperlink target. /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:330: WARNING: duplicate label resources, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/flux.rst /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1390: WARNING: duplicate label job properties, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst /builddir/build/BUILD/snakemake-7.32.4/docs/tutorial/additional_features.rst:198: WARNING: duplicate label cluster execution, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst /builddir/build/BUILD/snakemake-7.32.4/docs/tutorial/advanced.rst:82: WARNING: duplicate label exercise, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/tutorial/additional_features.rst /builddir/build/BUILD/snakemake-7.32.4/docs/tutorial/advanced.rst:177: WARNING: duplicate label exercise, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/tutorial/advanced.rst /builddir/build/BUILD/snakemake-7.32.4/docs/tutorial/advanced.rst:213: WARNING: duplicate label exercise, other instance in 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/builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:5: WARNING: Duplicate explicit target name: "here". /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:688: WARNING: Title underline too short. How can I avoid system /tmp to be used when combining singularity and conda? ------------------------------------------------------ /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/faq.rst:688: WARNING: Title underline too short. How can I avoid system /tmp to be used when combining singularity and conda? ------------------------------------------------------ /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1615: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1636: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1642: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1668: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1672: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1678: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:1687: WARNING: Non-consecutive header 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increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2837: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2937: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:2946: WARNING: Non-consecutive header level increase; H2 to H4 [myst.header] /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:18: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:25: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:32: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:53: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:63: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:70: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:75: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:82: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:92: WARNING: duplicate label bug fixes, other 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instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:184: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:191: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:198: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:204: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:211: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md 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instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:261: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:270: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:280: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:287: WARNING: duplicate label performance improvements, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:292: WARNING: duplicate label documentation, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md 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instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:338: WARNING: duplicate label performance improvements, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:345: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:350: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:358: WARNING: duplicate label features, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md:364: WARNING: duplicate label bug fixes, other instance in /builddir/build/BUILD/snakemake-7.32.4/docs/project_info/history.md 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/builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/best_practices.rst:22: WARNING: undefined label: 'snakefiles_peps' /builddir/build/BUILD/snakemake-7.32.4/docs/executing/cluster.rst:65: WARNING: undefined label: 'snakefiles-mpi' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:316: WARNING: undefined label: 'user_manual-snakemake_options' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:412: WARNING: undefined label: 'user_manual-snakemake_options' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:433: WARNING: undefined label: 'resources_remote_execution' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:441: WARNING: undefined label: 'resources_remote_execution' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1108: WARNING: undefined label: 'snakefiles_external-scripts' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1290: WARNING: undefined label: 'snakefiles_input-functions' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1362: WARNING: undefined label: 'snakefiles_ensure' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1951: WARNING: undefined label: 'job-grouping' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:1951: WARNING: undefined label: 'job-grouping' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/configuration.rst:35: WARNING: undefined label: 'api_reference_snakemake' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/utils.rst:7: WARNING: undefined label: 'utils-api' /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/foreign_wms.rst:30: WARNING: undefined label: 'snakefiles-local-rule' WARNING: Could not fetch remote image: https://img.shields.io/badge/Gitpod-ready--to--code-blue?logo=gitpod [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/Gitpod-ready--to--code-blue?logo=gitpod (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/conda/dn/bioconda/snakemake.svg?label=Bioconda [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /conda/dn/bioconda/snakemake.svg?label=Bioconda (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/pypi/pyversions/snakemake.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /pypi/pyversions/snakemake.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/pypi/v/snakemake.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /pypi/v/snakemake.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/github/workflow/status/snakemake/snakemake/Publish%20to%20Docker%20Hub?color=blue&label=docker%20container&branch=main [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /github/workflow/status/snakemake/snakemake/Publish%20to%20Docker%20Hub?color=blue&label=docker%20container&branch=main (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://github.com/snakemake/snakemake/workflows/CI/badge.svg?branch=main&label=tests [HTTPSConnectionPool(host='github.com', port=443): Max retries exceeded with url: /snakemake/snakemake/workflows/CI/badge.svg?branch=main&label=tests (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/badge/stack-overflow-orange.svg [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/stack-overflow-orange.svg (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/twitter/follow/johanneskoester.svg?style=social&label=Follow [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /twitter/follow/johanneskoester.svg?style=social&label=Follow (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/discord/753690260830945390?label=discord%20chat [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /discord/753690260830945390?label=discord%20chat (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/github/stars/snakemake/snakemake?style=social [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /github/stars/snakemake/snakemake?style=social (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] WARNING: Could not fetch remote image: https://img.shields.io/badge/snakemake-≥5.6.0-brightgreen.svg?style=flat [HTTPSConnectionPool(host='img.shields.io', port=443): Max retries exceeded with url: /badge/snakemake-%E2%89%A55.6.0-brightgreen.svg?style=flat (Caused by NewConnectionError(': Failed to establish a new connection: [Errno -3] Temporary failure in name resolution'))] /builddir/build/BUILD/snakemake-7.32.4/docs/executor_tutorial/azure_batch.rst:266: WARNING: Lexing literal_block '# required env variables\nexport AZ_BLOB_PREFIX=snakemake-tutorial\nexport AZ_BATCH_ACCOUNT_URL="${batch_account_url}"\nexport AZ_BATCH_ACCOUNT_KEY="${az_batch_account_key}"\nexport AZ_BLOB_ACCOUNT_URL="${storage_account_url_with_sas}"\n\n# optional environment variables with defaults listed\n\n# network and identity\n# export BATCH_POOL_SUBNET_ID=\n# export BATCH_MANAGED_IDENTITY_RESOURCE_ID=\n# export BATCH_MANAGED_IDENTITY_CLIENT_ID=\n\n# if unset, default is "classic"\n# export BATCH_NODE_COMMUNICATION_SIMPLIFIED=true\n\n# don\'t recommend changing\n# export BATCH_POOL_IMAGE_PUBLISHER=microsoft-azure-batch\n# export BATCH_POOL_IMAGE_OFFER=ubuntu-server-container\n# export BATCH_POOL_IMAGE_SKU=20-04-lts\n# export BATCH_POOL_RESOURCE_FILE_PREFIX=resource-files\n\n# export BATCH_POOL_VM_CONTAINER_IMAGE=ubuntu\n# export BATCH_POOL_VM_NODE_AGENT_SKU_ID="batch.node.ubuntu 20.04"\n\n# can be used to add a startup task to the batch nodes formatted as an sas url to a bash script\n# export BATCH_NODE_START_TASK_SAS_URL=\n\n# can be useful to alter task distribution across nodes\n\n# export BATCH_POOL_VM_SIZE=Standard_D2_v3\n# export BATCH_NODE_FILL_TYPE=spread\n# export BATCH_POOL_NODE_COUNT=1\n# export BATCH_TASKS_PER_NODE=1\n\n# container registry configuration to pull container image from custom registry\n# export BATCH_CONTAINER_REGISTRY_URL=\n# export BATCH_CONTAINER_REGISTRY_USER=\n# export BATCH_CONTAINER_REGISTRY_PASS=\n\nsnakemake \\\n --jobs 3 \\\n -rpf --verbose --default-remote-prefix $AZ_BLOB_PREFIX \\\n --use-conda \\\n --default-remote-provider AzBlob \\\n --envvars AZ_BLOB_ACCOUNT_URL \\\n --az-batch \\\n --container-image snakemake/snakemake \\\n --az-batch-account-url $AZ_BATCH_ACCOUNT_URL' as "console" resulted in an error at token: "'". Retrying in relaxed mode. /builddir/build/BUILD/snakemake-7.32.4/docs/snakefiles/rules.rst:2414: WARNING: Pygments lexer name 'jinja2' is not known make: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs' /usr/bin/make -C _build/latex all-pdf make[1]: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex' latexmk -pdf -dvi- -ps- 'Snakemake.tex' Rc files read: /etc/latexmkrc latexmkrc Latexmk: This is Latexmk, John Collins, 24 Dec. 2023. Version 4.82. No existing .aux file, so I'll make a simple one, and require run of *latex. Latexmk: applying rule 'pdflatex'... 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[165] [166] [167] [168] [169] [170] [171] [172] Underfull \hbox (badness 10000) in paragraph at lines 11299--11301 []\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10 NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM ono(0)/m/n/10 NCBI. Overfull \vbox (1.03299pt too high) detected at line 11355 [173] [174] Underfull \hbox (badness 5133) in paragraph at lines 11479--11486 []\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . 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[240] [241] [242] [243] [244] Underfull \hbox (badness 10000) in paragraph at lines 16974--16976 []\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i n order to avoid race conditions in [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 10000) in paragraph at lines 19438--19441 []\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\ TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/ [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] Underfull \hbox (badness 10000) in paragraph at lines 20504--20510 []\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/ FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1 0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use [279] [280] [281] No file Snakemake.ind. Package sphinx Warning: The package pict2e is required for rounded boxes. (sphinx) As it does not seem to be available on your system, (sphinx) options setting radii have all been ignored. Package sphinx Warning: The package ellipse is required for elliptical corners. (sphinx) As it does not seem to be available on your system, (sphinx) all non-straight corners have used circle arcs.. [282] (./Snakemake.aux) LaTeX Warning: There were undefined references. LaTeX Warning: Label(s) may have changed. Rerun to get cross-references right. Package rerunfilecheck Warning: File `Snakemake.out' has changed. (rerunfilecheck) Rerun to get outlines right (rerunfilecheck) or use package `bookmark'. ) (see the transcript file for additional information) Output written on Snakemake.pdf (286 pages). Transcript written on Snakemake.log. Latexmk: Getting log file 'Snakemake.log' Latexmk: Examining 'Snakemake.fls' Latexmk: Examining 'Snakemake.log' Latexmk: Index file 'Snakemake.idx' was written Latexmk: References changed. Latexmk: References changed. Latexmk: References changed. Latexmk: Log file says output to 'Snakemake.pdf' Latexmk: applying rule 'makeindex Snakemake.idx'... Rule 'makeindex Snakemake.idx': Reasons for rerun Category 'other': Rerun of 'makeindex Snakemake.idx' forced or previously required ------------ Run number 1 of rule 'makeindex Snakemake.idx' ------------ ------------ Running 'internal xindy -L english -C utf8 -M sphinx.xdy -o "Snakemake.ind" "Snakemake.idx"' ------------ Latexmk: calling xindy( -L english -C utf8 -M sphinx.xdy -o "Snakemake.ind" "Snakemake.idx" ) Latexmk: applying rule 'pdflatex'... Rule 'pdflatex': Reasons for rerun Changed files or newly in use/created: Snakemake.aux Snakemake.ind Snakemake.out Snakemake.toc ------------ Run number 2 of rule 'pdflatex' ------------ ------------ Running 'xelatex -recorder "Snakemake.tex"' ------------ This is XeTeX, Version 3.141592653-2.6-0.999995 (TeX Live 2023) (preloaded format=xelatex) restricted \write18 enabled. entering extended mode (./Snakemake.tex LaTeX2e <2022-11-01> patch level 1 L3 programming layer <2023-02-22> (./sphinxmanual.cls Document Class: sphinxmanual 2019/12/01 v2.3.0 Document class (Sphinx manual) (/usr/share/texlive/texmf-dist/tex/latex/base/report.cls Document Class: report 2022/07/02 v1.4n Standard LaTeX document class (/usr/share/texlive/texmf-dist/tex/latex/base/size10.clo))) (/usr/share/texlive/texmf-dist/tex/latex/cmap/cmap.sty Package cmap Warning: pdftex not detected - exiting. ) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec.sty (/usr/share/texlive/texmf-dist/tex/latex/l3packages/xparse/xparse.sty (/usr/share/texlive/texmf-dist/tex/latex/l3kernel/expl3.sty (/usr/share/texlive/texmf-dist/tex/latex/l3backend/l3backend-xetex.def))) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec-xetex.sty (/usr/share/texlive/texmf-dist/tex/latex/base/fontenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/fontspec/fontspec.cfg))) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsmath.sty For additional information on amsmath, use the `?' option. (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amstext.sty (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsgen.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsbsy.sty) (/usr/share/texlive/texmf-dist/tex/latex/amsmath/amsopn.sty)) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amssymb.sty (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/amsfonts.sty)) (/usr/share/texlive/texmf-dist/tex/latex/polyglossia/polyglossia.sty (/usr/share/texlive/texmf-dist/tex/latex/etoolbox/etoolbox.sty) (/usr/share/texlive/texmf-dist/tex/latex/makecmds/makecmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/xkeyval/xkeyval.sty (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkeyval.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/xkvutils.tex (/usr/share/texlive/texmf-dist/tex/generic/xkeyval/keyval.tex)))) (/usr/share/texlive/texmf-dist/tex/generic/iftex/iftex.sty) (/usr/share/texlive/texmf-dist/tex/latex/l3packages/l3keys2e/l3keys2e.sty) (/usr/share/texlive/texmf-dist/tex/latex/polyglossia/gloss-latex.lde)) (/usr/share/texlive/texmf-dist/tex/latex/polyglossia/gloss-english.ldf) (/usr/share/texlive/texmf-dist/tex/latex/fncychap/fncychap.sty) (./sphinx.sty (/usr/share/texlive/texmf-dist/tex/generic/ltxcmds/ltxcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/xcolor/xcolor.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/color.cfg) (/usr/share/texlive/texmf-dist/tex/latex/graphics-def/xetex.def) (/usr/share/texlive/texmf-dist/tex/latex/graphics/mathcolor.ltx)) (/usr/share/texlive/texmf-dist/tex/latex/kvoptions/kvoptions.sty (/usr/share/texlive/texmf-dist/tex/latex/kvsetkeys/kvsetkeys.sty)) (./sphinxoptionshyperref.sty) (./sphinxoptionsgeometry.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/textcomp.sty) (/usr/share/texlive/texmf-dist/tex/latex/float/float.sty) (/usr/share/texlive/texmf-dist/tex/latex/wrapfig/wrapfig.sty) (/usr/share/texlive/texmf-dist/tex/latex/capt-of/capt-of.sty) (/usr/share/texlive/texmf-dist/tex/latex/tools/multicol.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphicx.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/graphics.sty (/usr/share/texlive/texmf-dist/tex/latex/graphics/trig.sty) (/usr/share/texlive/texmf-dist/tex/latex/graphics-cfg/graphics.cfg))) (./sphinxlatexgraphics.sty) (./sphinxpackageboxes.sty Package sphinx Warning: The package pict2e is required for rounded boxes. 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(sphinx) All non-straight corners will use circle arcs.. ) (./sphinxlatexadmonitions.sty (/usr/share/texlive/texmf-dist/tex/latex/framed/framed.sty)) (./sphinxlatexliterals.sty (/usr/share/texlive/texmf-dist/tex/latex/fancyvrb/fancyvrb.sty) (/usr/share/texlive/texmf-dist/tex/latex/base/alltt.sty) (/usr/share/texlive/texmf-dist/tex/latex/upquote/upquote.sty) (/usr/share/texlive/texmf-dist/tex/latex/needspace/needspace.sty)) (./sphinxlatexshadowbox.sty) (./sphinxlatexcontainers.sty) (./sphinxhighlight.sty) (./sphinxlatextables.sty (/usr/share/texlive/texmf-dist/tex/latex/tabulary/tabulary.sty (/usr/share/texlive/texmf-dist/tex/latex/tools/array.sty)) (/usr/share/texlive/texmf-dist/tex/latex/tools/longtable.sty) (/usr/share/texlive/texmf-dist/tex/latex/varwidth/varwidth.sty) (/usr/share/texlive/texmf-dist/tex/latex/colortbl/colortbl.sty) (/usr/share/texlive/texmf-dist/tex/latex/booktabs/booktabs.sty)) (./sphinxlatexnumfig.sty) (./sphinxlatexlists.sty) (./sphinxpackagefootnote.sty ) (./sphinxlatexindbibtoc.sty (/usr/share/texlive/texmf-dist/tex/latex/base/makeidx.sty)) (./sphinxlatexstylepage.sty (/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip.sty (/usr/share/texlive/texmf-dist/tex/latex/parskip/parskip-2001-04-09.sty)) (/usr/share/texlive/texmf-dist/tex/latex/fancyhdr/fancyhdr.sty)) (./sphinxlatexstyleheadings.sty (/usr/share/texlive/texmf-dist/tex/latex/titlesec/titlesec.sty)) (./sphinxlatexstyletext.sty) (./sphinxlatexobjects.sty)) (/usr/share/texlive/texmf-dist/tex/latex/geometry/geometry.sty (/usr/share/texlive/texmf-dist/tex/generic/iftex/ifvtex.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hyperref.sty (/usr/share/texlive/texmf-dist/tex/generic/pdftexcmds/pdftexcmds.sty (/usr/share/texlive/texmf-dist/tex/generic/infwarerr/infwarerr.sty)) (/usr/share/texlive/texmf-dist/tex/generic/kvdefinekeys/kvdefinekeys.sty) (/usr/share/texlive/texmf-dist/tex/generic/pdfescape/pdfescape.sty) (/usr/share/texlive/texmf-dist/tex/latex/hycolor/hycolor.sty) (/usr/share/texlive/texmf-dist/tex/latex/letltxmacro/letltxmacro.sty) (/usr/share/texlive/texmf-dist/tex/latex/auxhook/auxhook.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/nameref.sty (/usr/share/texlive/texmf-dist/tex/latex/refcount/refcount.sty) (/usr/share/texlive/texmf-dist/tex/generic/gettitlestring/gettitlestring.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/pd1enc.def) (/usr/share/texlive/texmf-dist/tex/generic/intcalc/intcalc.sty) (/usr/share/texlive/texmf-dist/tex/generic/etexcmds/etexcmds.sty) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/puenc.def) (/usr/share/texlive/texmf-dist/tex/latex/url/url.sty) (/usr/share/texlive/texmf-dist/tex/generic/bitset/bitset.sty (/usr/share/texlive/texmf-dist/tex/generic/bigintcalc/bigintcalc.sty)) (/usr/share/texlive/texmf-dist/tex/latex/base/atbegshi-ltx.sty)) (/usr/share/texlive/texmf-dist/tex/latex/hyperref/hxetex.def (/usr/share/texlive/texmf-dist/tex/generic/stringenc/stringenc.sty) (/usr/share/texlive/texmf-dist/tex/latex/rerunfilecheck/rerunfilecheck.sty (/usr/share/texlive/texmf-dist/tex/latex/base/atveryend-ltx.sty) (/usr/share/texlive/texmf-dist/tex/generic/uniquecounter/uniquecounter.sty))) (/usr/share/texlive/texmf-dist/tex/latex/oberdiek/hypcap.sty) (./sphinxmessages.sty) Writing index file Snakemake.idx (./Snakemake.aux) (/usr/share/texlive/texmf-dist/tex/latex/base/ts1cmr.fd) *geometry* driver: auto-detecting *geometry* detected driver: xetex (./Snakemake.out) (./Snakemake.out) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsa.fd) (/usr/share/texlive/texmf-dist/tex/latex/amsfonts/umsb.fd) [1] [2] (./Snakemake.toc) [1] [2] [1] [2] Chapter 1. [3] [4] Chapter 2. [5] [6] Chapter 3. [7] [8] Chapter 4. [9] [10] [11] [12] [13] [14] [15] [16] [17] [18] [19] [20] [21] [22] [23] [24] [25] [26] [27] [28] [29] [30] [31] [32] [33] [34] [35] [36] [37] [38] [39] [40] [41] [42] Overfull \vbox (1.78299pt too high) detected at line 2638 [43] [44] [45] [46] Overfull \hbox (16.155pt too wide) in paragraph at lines 2923--2925 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_IMAGE_PUBLISHER| Overfull \hbox (40.465pt too wide) in paragraph at lines 2953--2955 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_VM_CONTAINER_IMAGE| Overfull \hbox (52.17499pt too wide) in paragraph at lines 2963--2965 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_VM_NODE_AGENT_SKU_ID| Overfull \hbox (42.36499pt too wide) in paragraph at lines 3003--3005 []|\TU/FreeSerif(0)/m/n/10 BATCH_POOL_RESOURCE_FILE_PREFIX| Overfull \hbox (34.435pt too wide) in paragraph at lines 3013--3015 []|\TU/FreeSerif(0)/m/n/10 BATCH_NODE_START_TASK_SAS_URL| Overfull \hbox (72.44499pt too wide) in paragraph at lines 3033--3035 []|\TU/FreeSerif(0)/m/n/10 BATCH_NODE_COMMUNICATION_SIMPLIFIED| Overfull \hbox (67.97499pt too wide) in paragraph at lines 3053--3055 []|\TU/FreeSerif(0)/m/n/10 BATCH_MANAGED_IDENTITY_RESOURCE_ID| Overfull \hbox (51.485pt too wide) in paragraph at lines 3063--3065 []|\TU/FreeSerif(0)/m/n/10 BATCH_MANAGED_IDENTITY_CLIENT_ID| Overfull \hbox (28.965pt too wide) in paragraph at lines 3073--3075 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_URL| Overfull \hbox (34.045pt too wide) in paragraph at lines 3083--3085 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_USER| Overfull \hbox (31.625pt too wide) in paragraph at lines 3093--3095 []|\TU/FreeSerif(0)/m/n/10 BATCH_CONTAINER_REGISTRY_PASS| [47] Overfull \vbox (0.72789pt too high) detected at line 3160 [48] Overfull \vbox (1.98596pt too high) detected at line 3201 [49] Underfull \vbox (badness 10000) detected at line 3201 Overfull \vbox (1.98598pt too high) detected at line 3201 [50] Underfull \hbox (badness 10000) in paragraph at lines 3235--3239 \TU/FreeSerif(0)/m/n/10 The azure batch executor supports autoscaling of the ba tch nodes by including the flag [51] [52] Underfull \hbox (badness 10000) in paragraph at lines 3376--3388 []\TU/FreeSerif(0)/m/n/10 There is a lot going on here, so let’s unpack it: thi s creates an [][]auto-scaling Kubernetes cluster[][] [53] [54] [55] [56] [57] Overfull \vbox (1.98596pt too high) detected at line 3840 [58] [59] [60] Underfull \vbox (badness 10000) detected at line 4080 Overfull \vbox (1.98598pt too high) detected at line 4080 [61] Underfull \vbox (badness 10000) detected at line 4080 Overfull \vbox (1.98598pt too high) detected at line 4080 [62] [63] [64] [65] [66] Underfull \vbox (badness 10000) detected at line 4358 Underfull \vbox (badness 10000) detected at line 4358 [67] Underfull \vbox (badness 10000) detected at line 4358 Overfull \vbox (1.98598pt too high) detected at line 4358 [68] Underfull \vbox (badness 1565) detected at line 4404 [69] [70] Overfull \vbox (2.98596pt too high) detected at line 4504 [71] [72] [73] Underfull \vbox (badness 2126) detected at line 4740 [74] [75] [76] [77] [78] Overfull \vbox (2.033pt too high) detected at line 5158 [79] [80] [81] [82] [83] [84] [85] [86] [87] [88] Overfull \hbox (11.06543pt too wide) in paragraph at lines 5685--5687 []\TU/FreeSerif(0)/m/n/10 Target particular jobs by RULE:WILDCARD1=VALUE,WILDCA RD2=VALUE,… [89] [90] [91] [92] [93] Underfull \hbox (badness 10000) in paragraph at lines 5946--5948 []\TU/FreeSerif(0)/m/n/10 Additional tibanna config e.g. –tibanna-config spot_i nstance=true sub- [94] [95] [96] Underfull \hbox (badness 10000) in paragraph at lines 6273--6273 []\TU/FreeSans(0)/m/n/10 Snakemake re- Overfull \hbox (0.88507pt too wide) in paragraph at lines 6273--6273 []\TU/FreeMono(0)/m/n/10 slurm_partition| Overfull \hbox (3.79732pt too wide) in paragraph at lines 6273--6273 [][]\TU/FreeMono(0)/m/n/10 c\TU/FreeSerif(0)/m/n/10 /[][]\TU/FreeMono(0)/m/n/10 cpus[]per[]task| [97] [98] [99] [100] [101] [102] [103] [104] [105] [106] [107] Underfull \hbox (badness 10000) in paragraph at lines 7013--7017 []\TU/FreeSerif(0)/m/n/10 The azure batch executor supports autoscaling of the batch nodes by including the flag [108] [109] Underfull \hbox (badness 10000) in paragraph at lines 7213--7216 []|\TU/FreeSerif(0)/m/n/10 Snakemake gets the status of panoptes. Underfull \hbox (badness 6859) in paragraph at lines 7213--7216 \TU/FreeSerif(0)/m/n/10 Snakemake continues to run if the status Underfull \hbox (badness 10000) in paragraph at lines 7230--7232 []|\TU/FreeMono(0)/m/n/10 / Overfull \hbox (9.78429pt too wide) in paragraph at lines 7230--7232 \TU/FreeMono(0)/m/n/10 update_workflow_status| [110] [111] [112] [113] [114] [115] [116] [117] [118] [119] [120] [121] [122] [123] [124] [125] [126] [127] [128] [129] [130] [131] [132] [133] [134] [135] [136] Underfull \hbox (badness 5652) in paragraph at lines 8976--8980 \TU/FreeSerif(0)/m/n/10 Snakemake tracks the code that was used to create your files. In combination with [][]\TU/FreeMono(0)/m/n/10 summary \TU/FreeSerif(0)/ m/n/10 or [137] [138] [139] [140] [141] [142] [143] [144] Overfull \vbox (2.64099pt too high) detected at line 9545 [145] [146] [147] [148] [149] [150] [151] [152] [153] [154] [155] [156] [157] [158] [159] [160] [161] Overfull \vbox (0.688pt too high) detected at line 10609 [162] [163] [164] [165] [166] [167] [168] [169] [170] [171] [172] Underfull \hbox (badness 10000) in paragraph at lines 11299--11301 []\TU/FreeSerif(0)/m/n/10 When used in conjunction with \TU/FreeMono(0)/m/n/10 NCBI.RemoteProvider().search()\TU/FreeSerif(0)/m/n/10 , Snakemake and \TU/FreeM ono(0)/m/n/10 NCBI. Overfull \vbox (1.03299pt too high) detected at line 11355 [173] [174] Underfull \hbox (badness 5133) in paragraph at lines 11479--11486 []\TU/FreeSerif(0)/m/n/10 The default location for the configuration file is \T U/FreeMono(0)/m/n/10 ~/.irods/irods_environment.json\TU/FreeSerif(0)/m/n/10 . T he \TU/FreeMono(0)/m/n/10 Re- Underfull \hbox (badness 10000) in paragraph at lines 11479--11486 \TU/FreeMono(0)/m/n/10 moteProvider() \TU/FreeSerif(0)/m/n/10 class accepts the parameter \TU/FreeMono(0)/m/n/10 irods_env_file \TU/FreeSerif(0)/m/n/10 where an alternative path to the [175] [176] [177] Underfull \hbox (badness 10000) in paragraph at lines 11628--11634 \TU/FreeSerif(0)/m/n/10 If you need to access a deposition with restricted acce ss, you have to additionally provide a \TU/FreeMono(0)/m/n/10 re- [178] [179] Underfull \hbox (badness 5878) in paragraph at lines 11786--11792 []\TU/FreeSerif(0)/m/n/10 First, we load a local configuration file. Next, we d efine the module \TU/FreeMono(0)/m/n/10 dna_seq \TU/FreeSerif(0)/m/n/10 to be l oaded from [180] Overfull \vbox (2.98596pt too high) detected at line 11881 [181] [182] [183] [184] [185] [186] [187] [188] [189] [190] [191] [192] [193] [194] [195] Overfull \vbox (2.0pt too high) has occurred while \output is active [196] [197] [198] [199] [200] [201] [202] [203] [204] [205] [206] [207] [208] [209] [210] Underfull \vbox (badness 10000) detected at line 13935 Overfull \vbox (1.98598pt too high) detected at line 13935 [211] [212] Underfull \hbox (badness 10000) in paragraph at lines 14076--14079 []\TU/FreeSerif(0)/m/n/10 Provide hyperlink targets, at least for the first two section levels. For this, use the format [213] [214] [215] [216] [217] [218] [219] [220] [221] [222] [223] [224] [225] [226] [227] [228] [229] [230] [231] [232] [233] [234] [235] [236] [237] [238] [239] Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script= latn;language=dflt;! [240] [241] [242] [243] [244] Underfull \hbox (badness 10000) in paragraph at lines 16974--16976 []\TU/FreeSerif(0)/m/n/10 provide temporary IPYTHONDIR for notebook execution i n order to avoid race conditions in [245] [246] [247] [248] [249] [250] [251] [252] [253] [254] [255] [256] [257] [258] [259] [260] [261] [262] [263] [264] [265] [266] [267] [268] Underfull \hbox (badness 10000) in paragraph at lines 19438--19441 []\TU/FreeSerif(0)/m/n/10 Allow URL to local git repo with wrapper directive (\ TU/FreeMono(0)/m/n/10 git+file:///path/to/your/repo/ [269] [270] [271] [272] [273] [274] [275] [276] [277] [278] Underfull \hbox (badness 10000) in paragraph at lines 20504--20510 []\TU/FreeSerif(0)/m/n/10 When submitting cluster jobs (either through [][]\TU/ FreeMono(0)/m/n/10 cluster \TU/FreeSerif(0)/m/n/10 or [][]\TU/FreeMono(0)/m/n/1 0 drmaa\TU/FreeSerif(0)/m/n/10 ), you can now use [279] [280] [281] (./Snakemake.ind) Package sphinx Warning: The package pict2e is required for rounded boxes. (sphinx) As it does not seem to be available on your system, (sphinx) options setting radii have all been ignored. Package sphinx Warning: The package ellipse is required for elliptical corners. (sphinx) As it does not seem to be available on your system, (sphinx) all non-straight corners have used circle arcs.. [282] (./Snakemake.aux) ) (see the transcript file for additional information) Output written on Snakemake.pdf (286 pages). Transcript written on Snakemake.log. Latexmk: Getting log file 'Snakemake.log' Latexmk: Examining 'Snakemake.fls' Latexmk: Examining 'Snakemake.log' Latexmk: Index file 'Snakemake.idx' was written Latexmk: Log file says output to 'Snakemake.pdf' Latexmk: Summary of warnings from last run of *latex: =====Latex reported missing or unavailable character(s). =====See log file for details. Latexmk: All targets () are up-to-date make[1]: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex' make: Entering directory '/builddir/build/BUILD/snakemake-7.32.4/docs' pdflatex finished; the PDF files are in _build/latex. make: Leaving directory '/builddir/build/BUILD/snakemake-7.32.4/docs' Executing(%install): /bin/sh -e /var/tmp/rpm-tmp.UAk0Nl Latexmk: Missing input file 'Snakemake.toc' (or dependence on it) from following: No file Snakemake.toc. Latexmk: Missing input file 'Snakemake.ind' (or dependence on it) from following: No file Snakemake.ind. Latexmk: ====Undefined refs and citations with line #s in .tex file: Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script= Missing character: There is no ⚠ (U+26A0) in font [FreeSansBold.otf]/OT:script=latn;language=dflt;! + RPM_EC=0 ++ jobs -p + exit 0 + umask 022 + cd /builddir/build/BUILD + '[' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x '!=' / ']' + rm -rf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x ++ dirname /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x + mkdir -p /builddir/build/BUILDROOT + mkdir /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 ++ ls /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir/snakemake-7.32.4-py3-none-any.whl ++ sed -E 's/([^-]+)-([^-]+)-.+\.whl/\1==\2/' ++ xargs basename --multiple + specifier=snakemake==7.32.4 + '[' -z snakemake==7.32.4 ']' + TMPDIR=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir + /usr/bin/python3 -m pip install --root /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x --prefix /usr --no-deps --disable-pip-version-check --progress-bar off --verbose --ignore-installed --no-warn-script-location --no-index --no-cache-dir --find-links /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir snakemake==7.32.4 Using pip 23.3.1 from /usr/lib/python3.12/site-packages/pip (python 3.12) Looking in links: /builddir/build/BUILD/snakemake-7.32.4/pyproject-wheeldir Processing ./pyproject-wheeldir/snakemake-7.32.4-py3-none-any.whl Installing collected packages: snakemake Creating /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin changing mode of /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake to 755 changing mode of /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake-bash-completion to 755 Successfully installed snakemake-7.32.4 + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin ']' + '[' -z sP ']' + shebang_flags=-kasP + /usr/bin/python3 -B /usr/lib/rpm/redhat/pathfix.py -pni /usr/bin/python3 -kasP /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake-bash-completion /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake: updating /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/snakemake-bash-completion: updating + rm -rfv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin/__pycache__ + rm -f /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-ghost-distinfo + site_dirs=() + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages ']' + site_dirs+=("/usr/lib/python3.12/site-packages") + '[' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib64/python3.12/site-packages '!=' /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages ']' + '[' -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib64/python3.12/site-packages ']' + for site_dir in ${site_dirs[@]} + for distinfo in /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x$site_dir/*.dist-info + echo '%ghost /usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info' + sed -i s/pip/rpm/ /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/INSTALLER + PYTHONPATH=/usr/lib/rpm/redhat + /usr/bin/python3 -B /usr/lib/rpm/redhat/pyproject_preprocess_record.py --buildroot /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x --record /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD --output /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-record + rm -fv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD removed '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/RECORD' + rm -fv /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/REQUESTED removed '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages/snakemake-7.32.4.dist-info/REQUESTED' ++ wc -l /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-ghost-distinfo ++ cut -f1 '-d ' + lines=1 + '[' 1 -ne 1 ']' + RPM_PERCENTAGES_COUNT=2 + /usr/bin/python3 /usr/lib/rpm/redhat/pyproject_save_files.py --output-files /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-files --output-modules /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-modules --buildroot /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x --sitelib /usr/lib/python3.12/site-packages --sitearch /usr/lib64/python3.12/site-packages --python-version 3.12 --pyproject-record /builddir/build/BUILD/snakemake-7.32.4-3.fc40.s390x-pyproject-record --prefix /usr -l snakemake + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/man/man1 + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages + help2man --no-info '--name=Metapackage for snakemake: azure extras' snakemake + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/bash-completion/completions + touch Snakefile + PATH=/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages + snakemake --bash-completion + install -t /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/nano -D -m 0644 -p misc/nano/syntax/snakemake.nanorc + install -d /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles + cp -vrp misc/vim/README.md misc/vim/ftdetect misc/vim/ftplugin misc/vim/syntax /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles 'misc/vim/README.md' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/README.md' 'misc/vim/ftdetect' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftdetect' 'misc/vim/ftdetect/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftdetect/snakemake.vim' 'misc/vim/ftplugin' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin' 'misc/vim/ftplugin/snakemake' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin/snakemake' 'misc/vim/ftplugin/snakemake/folding.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin/snakemake/folding.vim' 'misc/vim/ftplugin/snakemake/sections.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/ftplugin/snakemake/sections.vim' 'misc/vim/syntax' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/syntax' 'misc/vim/syntax/snakemake.vim' -> '/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/syntax/snakemake.vim' + find /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles -type f -name 'README.*' -print -delete /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/vim/vimfiles/README.md + /usr/bin/find-debuginfo -j2 --strict-build-id -m -i --build-id-seed 7.32.4-3.fc40 --unique-debug-suffix -7.32.4-3.fc40.s390x --unique-debug-src-base snakemake-7.32.4-3.fc40.s390x --run-dwz --dwz-low-mem-die-limit 10000000 --dwz-max-die-limit 50000000 -S debugsourcefiles.list /builddir/build/BUILD/snakemake-7.32.4 find-debuginfo: starting Extracting debug info from 0 files Creating .debug symlinks for symlinks to ELF files find: ‘debug’: No such file or directory find-debuginfo: done + /usr/lib/rpm/check-buildroot + /usr/lib/rpm/redhat/brp-ldconfig + /usr/lib/rpm/brp-compress + /usr/lib/rpm/redhat/brp-strip-lto /usr/bin/strip + /usr/lib/rpm/brp-strip-static-archive /usr/bin/strip + /usr/lib/rpm/check-rpaths + /usr/lib/rpm/redhat/brp-mangle-shebangs + /usr/lib/rpm/brp-remove-la-files + env /usr/lib/rpm/redhat/brp-python-bytecompile '' 1 0 -j2 Bytecompiling .py files below /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12 using python3.12 + /usr/lib/rpm/redhat/brp-python-hardlink Executing(%check): /bin/sh -e /var/tmp/rpm-tmp.FDsvkm + umask 022 + cd /builddir/build/BUILD + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CFLAGS + CXXFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + export CXXFLAGS + FFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FFLAGS + FCFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection -I/usr/lib64/gfortran/modules ' + export FCFLAGS + VALAFLAGS=-g + export VALAFLAGS + RUSTFLAGS='-Copt-level=3 -Cdebuginfo=2 -Ccodegen-units=1 -Cstrip=none -Clink-arg=-Wl,-z,relro -Clink-arg=-Wl,-z,now -Clink-arg=-specs=/usr/lib/rpm/redhat/redhat-package-notes --cap-lints=warn' + export RUSTFLAGS + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + export LDFLAGS + LT_SYS_LIBRARY_PATH=/usr/lib64: + export LT_SYS_LIBRARY_PATH + CC=gcc + export CC + CXX=g++ + export CXX + cd snakemake-7.32.4 + k='not test_lint[long_run-positive]' + k='not test_lint[long_run-positive] and not test_tibanna' + k='not test_lint[long_run-positive] and not test_tibanna and not test_tes' + k='not test_lint[long_run-positive] and not test_tibanna and not test_tes and not test_slurm_' + ignore=' --ignore=tests/test_google_lifesciences.py' + ignore=' --ignore=tests/test_google_lifesciences.py --ignore-glob=tests/test_conda_python_3_7_script/*' + CFLAGS='-O2 -flto=auto -ffat-lto-objects -fexceptions -g -grecord-gcc-switches -pipe -Wall -Werror=format-security -Werror=implicit-function-declaration -Werror=implicit-int -Wp,-U_FORTIFY_SOURCE,-D_FORTIFY_SOURCE=3 -Wp,-D_GLIBCXX_ASSERTIONS -specs=/usr/lib/rpm/redhat/redhat-hardened-cc1 -fstack-protector-strong -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -m64 -march=z13 -mtune=z14 -fasynchronous-unwind-tables -fstack-clash-protection ' + LDFLAGS='-Wl,-z,relro -Wl,--as-needed -Wl,-z,now -specs=/usr/lib/rpm/redhat/redhat-hardened-ld -specs=/usr/lib/rpm/redhat/redhat-annobin-cc1 -Wl,--build-id=sha1 -specs=/usr/lib/rpm/redhat/redhat-package-notes ' + PATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/bin:/usr/bin:/bin:/usr/sbin:/sbin:/usr/local/sbin + PYTHONPATH=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib64/python3.12/site-packages:/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/lib/python3.12/site-packages + PYTHONDONTWRITEBYTECODE=1 + PYTEST_ADDOPTS=' --ignore=/builddir/build/BUILD/snakemake-7.32.4/.pyproject-builddir' + PYTEST_XDIST_AUTO_NUM_WORKERS=2 + /usr/bin/pytest -v -k 'not test_lint[long_run-positive] and not test_tibanna and not test_tes and not test_slurm_' --ignore=tests/test_google_lifesciences.py '--ignore-glob=tests/test_conda_python_3_7_script/*' ============================= test session starts ============================== platform linux -- Python 3.12.1, pytest-7.4.3, pluggy-1.3.0 -- /usr/bin/python3 cachedir: .pytest_cache rootdir: /builddir/build/BUILD/snakemake-7.32.4 plugins: requests-mock-1.10.0 collecting ... collected 66 items / 8 deselected / 58 selected tests/test_azure_batch_executor.py::test_az_batch_executor SKIPPED (...) [ 1%] tests/test_expand.py::test_simple_expand PASSED [ 3%] tests/test_expand.py::test_allow_missing PASSED [ 5%] tests/test_io.py::test_wildcard_regex PASSED [ 6%] tests/test_io.py::test_expand PASSED [ 8%] tests/test_kubernetes.py::test_kubernetes_plain SKIPPED (Skipping GC...) [ 10%] tests/test_kubernetes.py::test_kubernetes_conda SKIPPED (Skipping GC...) [ 12%] tests/test_kubernetes.py::test_kubernetes_singularity SKIPPED (Skipp...) [ 13%] tests/test_kubernetes.py::test_kubernetes_conda_singularity SKIPPED [ 15%] tests/test_kubernetes.py::test_issue1041 SKIPPED (Skipping GCLOUD te...) [ 17%] tests/test_linting.py::test_lint[version-positive] PASSED [ 18%] tests/test_linting.py::test_lint[version-negative] PASSED [ 20%] tests/test_linting.py::test_lint[tab_usage-positive] PASSED [ 22%] tests/test_linting.py::test_lint[tab_usage-negative] PASSED [ 24%] tests/test_linting.py::test_lint[singularity-positive] PASSED [ 25%] tests/test_linting.py::test_lint[singularity-negative] PASSED [ 27%] tests/test_linting.py::test_lint[path_add-positive] PASSED [ 29%] tests/test_linting.py::test_lint[path_add-negative] PASSED [ 31%] tests/test_linting.py::test_lint[params_prefix-positive] PASSED [ 32%] tests/test_linting.py::test_lint[params_prefix-negative] PASSED [ 34%] tests/test_linting.py::test_lint[not_used_params-positive] PASSED [ 36%] tests/test_linting.py::test_lint[not_used_params-negative] PASSED [ 37%] tests/test_linting.py::test_lint[mixed_func_and_rules-positive] PASSED [ 39%] tests/test_linting.py::test_lint[mixed_func_and_rules-negative] PASSED [ 41%] tests/test_linting.py::test_lint[missing_software_definition-positive] PASSED [ 43%] tests/test_linting.py::test_lint[missing_software_definition-negative] PASSED [ 44%] tests/test_linting.py::test_lint[long_run-negative] PASSED [ 46%] tests/test_linting.py::test_lint[log_directive-positive] PASSED [ 48%] tests/test_linting.py::test_lint[log_directive-negative] PASSED [ 50%] tests/test_linting.py::test_lint[iofile_by_index-positive] PASSED [ 51%] tests/test_linting.py::test_lint[iofile_by_index-negative] PASSED [ 53%] tests/test_linting.py::test_lint[envvars-positive] PASSED [ 55%] tests/test_linting.py::test_lint[envvars-negative] PASSED [ 56%] tests/test_linting.py::test_lint[dynamic-positive] PASSED [ 58%] tests/test_linting.py::test_lint[dynamic-negative] PASSED [ 60%] tests/test_linting.py::test_lint[absolute_paths-positive] PASSED [ 62%] tests/test_linting.py::test_lint[absolute_paths-negative] PASSED [ 63%] tests/test_persistence.py::TestCleanupContainers::test_one_unrequired_container_gets_removed PASSED [ 65%] tests/test_schema.py::test_config PASSED [ 67%] tests/test_schema.py::test_config_ref PASSED [ 68%] tests/test_schema.py::test_dataframe PASSED [ 70%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_shebang_and_second_manifest PASSED [ 72%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_with_shebang PASSED [ 74%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_not_at_start_without_shebang PASSED [ 75%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_with_empty_line_without_shebang PASSED [ 77%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_is_case_insensitive PASSED [ 79%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spacing_has_no_impact PASSED [ 81%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_formatting_not_touched_even_if_wrong PASSED [ 82%] tests/test_script.py::TestRustScriptExtractManifest::test_single_line_manifest_spelt_wrong PASSED [ 84%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_shebang PASSED [ 86%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_without_shebang PASSED [ 87%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_spacing_around_language PASSED [ 89%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_has_non_cargo_block PASSED [ 91%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_missing_closing_fence PASSED [ 93%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_not_in_first_comment_block PASSED [ 94%] tests/test_script.py::TestRustScriptExtractManifest::test_code_block_manifest_with_outer_line_doc_comment PASSED [ 96%] tests/test_script.py::TestBashEncoder::test_named_list_one_named_one_str PASSED [ 98%] tests/test_script.py::TestBashEncoder::test_named_list_named_is_list PASSED [100%] =============================== warnings summary =============================== tests/test_schema.py: 12 warnings /builddir/build/BUILD/snakemake-7.32.4/snakemake/utils.py:50: DeprecationWarning: jsonschema.RefResolver is deprecated as of v4.18.0, in favor of the https://github.com/python-jsonschema/referencing library, which provides more compliant referencing behavior as well as more flexible APIs for customization. A future release will remove RefResolver. Please file a feature request (on referencing) if you are missing an API for the kind of customization you need. from jsonschema import validators, RefResolver tests/test_schema.py::test_config :488: DeprecationWarning: Type google.protobuf.pyext._message.ScalarMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_schema.py::test_config :488: DeprecationWarning: Type google.protobuf.pyext._message.MessageMapContainer uses PyType_Spec with a metaclass that has custom tp_new. This is deprecated and will no longer be allowed in Python 3.14. tests/test_schema.py::test_config /usr/lib64/python3.12/site-packages/google/protobuf/internal/well_known_types.py:92: DeprecationWarning: datetime.datetime.utcfromtimestamp() is deprecated and scheduled for removal in a future version. Use timezone-aware objects to represent datetimes in UTC: datetime.datetime.fromtimestamp(timestamp, datetime.UTC). _EPOCH_DATETIME = datetime.utcfromtimestamp(0) tests/test_schema.py::test_dataframe /usr/lib64/python3.12/site-packages/pandas/core/algorithms.py:522: DeprecationWarning: np.find_common_type is deprecated. Please use `np.result_type` or `np.promote_types`. See https://numpy.org/devdocs/release/1.25.0-notes.html and the docs for more information. (Deprecated NumPy 1.25) common = np.find_common_type([values.dtype, comps_array.dtype], []) -- Docs: https://docs.pytest.org/en/stable/how-to/capture-warnings.html ========== 52 passed, 6 skipped, 8 deselected, 16 warnings in 15.41s =========== + RPM_EC=0 ++ jobs -p + exit 0 Processing files: snakemake-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake) = 7.32.4 python3dist(snakemake) = 7.32.4 snakemake = 7.32.4-3.fc40 vim-snakemake = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PartialHardlinkSets) <= 4.0.4-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: (python3.12dist(jinja2) < 4~~ with python3.12dist(jinja2) >= 3) (python3.12dist(yte) < 2~~ with python3.12dist(yte) >= 1.5.1) /usr/bin/python3 python(abi) = 3.12 python3.12dist(appdirs) python3.12dist(configargparse) python3.12dist(connection-pool) >= 0.0.3 python3.12dist(datrie) python3.12dist(docutils) python3.12dist(gitpython) python3.12dist(humanfriendly) python3.12dist(jsonschema) python3.12dist(nbformat) python3.12dist(packaging) python3.12dist(psutil) python3.12dist(pulp) >= 2 python3.12dist(pyyaml) python3.12dist(requests) python3.12dist(reretry) python3.12dist(smart-open) >= 3 python3.12dist(stopit) python3.12dist(tabulate) python3.12dist(throttler) python3.12dist(toposort) >= 1.10 python3.12dist(wrapt) Processing files: snakemake-doc-7.32.4-3.fc40.noarch Executing(%doc): /bin/sh -e /var/tmp/rpm-tmp.YvGQan + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + DOCDIR=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + export LC_ALL= + LC_ALL= + export DOCDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/CHANGELOG.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/CODE_OF_CONDUCT.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README-nano.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/README-vim.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/docs/_build/latex/Snakemake.pdf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/doc/snakemake-doc + RPM_EC=0 ++ jobs -p + exit 0 Executing(%license): /bin/sh -e /var/tmp/rpm-tmp.s8LwTr + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + LICENSEDIR=/builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/licenses/snakemake-doc + export LC_ALL= + LC_ALL= + export LICENSEDIR + /usr/bin/mkdir -p /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/licenses/snakemake-doc + cp -pr /builddir/build/BUILD/snakemake-7.32.4/LICENSE.md /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x/usr/share/licenses/snakemake-doc + RPM_EC=0 ++ jobs -p + exit 0 Provides: snakemake-doc = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Processing files: snakemake+reports-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[reports]) = 7.32.4 python3dist(snakemake[reports]) = 7.32.4 snakemake+reports = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(pygments) Processing files: snakemake+messaging-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[messaging]) = 7.32.4 python3dist(snakemake[messaging]) = 7.32.4 snakemake+messaging = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(slacker) Processing files: snakemake+google-cloud-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[google-cloud]) = 7.32.4 python3dist(snakemake[google-cloud]) = 7.32.4 snakemake+google-cloud = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(google-api-python-client) python3.12dist(google-cloud-storage) python3.12dist(google-crc32c) python3.12dist(oauth2client) Processing files: snakemake+azure-7.32.4-3.fc40.noarch Provides: python3.12dist(snakemake[azure]) = 7.32.4 python3dist(snakemake[azure]) = 7.32.4 snakemake+azure = 7.32.4-3.fc40 Requires(rpmlib): rpmlib(CompressedFileNames) <= 3.0.4-1 rpmlib(FileDigests) <= 4.6.0-1 rpmlib(PayloadFilesHavePrefix) <= 4.0-1 Requires: python(abi) = 3.12 python3.12dist(azure-batch) python3.12dist(azure-core) python3.12dist(azure-identity) python3.12dist(azure-mgmt-batch) python3.12dist(azure-storage-blob) Checking for unpackaged file(s): /usr/lib/rpm/check-files /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x Wrote: /builddir/build/SRPMS/snakemake-7.32.4-3.fc40.src.rpm Wrote: /builddir/build/RPMS/snakemake-doc-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+google-cloud-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+messaging-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+reports-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake+azure-7.32.4-3.fc40.noarch.rpm Wrote: /builddir/build/RPMS/snakemake-7.32.4-3.fc40.noarch.rpm Executing(%clean): /bin/sh -e /var/tmp/rpm-tmp.wzpcu1 + umask 022 + cd /builddir/build/BUILD + cd snakemake-7.32.4 + /usr/bin/rm -rf /builddir/build/BUILDROOT/snakemake-7.32.4-3.fc40.s390x + RPM_EC=0 ++ jobs -p + exit 0 Executing(rmbuild): /bin/sh -e /var/tmp/rpm-tmp.Mdflor + umask 022 + cd /builddir/build/BUILD + rm -rf /builddir/build/BUILD/snakemake-7.32.4-SPECPARTS + rm -rf snakemake-7.32.4 snakemake-7.32.4.gemspec + RPM_EC=0 ++ jobs -p + exit 0 Finish: rpmbuild snakemake-7.32.4-3.fc40.src.rpm Finish: build phase for snakemake-7.32.4-3.fc40.src.rpm INFO: chroot_scan: 3 files copied to /var/lib/copr-rpmbuild/results/chroot_scan INFO: /var/lib/mock/fedora-39-s390x-1704460468.318683/root/var/log/dnf.rpm.log /var/lib/mock/fedora-39-s390x-1704460468.318683/root/var/log/dnf.librepo.log /var/lib/mock/fedora-39-s390x-1704460468.318683/root/var/log/dnf.log INFO: Done(/var/lib/copr-rpmbuild/results/snakemake-7.32.4-3.fc40.src.rpm) Config(child) 2 minutes 55 seconds INFO: Results and/or logs in: /var/lib/copr-rpmbuild/results INFO: Cleaning up build root ('cleanup_on_success=True') Start: clean chroot INFO: unmounting tmpfs. Finish: clean chroot Finish: run Running RPMResults tool Package info: { "packages": [ { "name": "snakemake+azure", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake+messaging", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "src" }, { "name": "snakemake+reports", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake-doc", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" }, { "name": "snakemake+google-cloud", "epoch": null, "version": "7.32.4", "release": "3.fc40", "arch": "noarch" } ] } RPMResults finished